Guide to the Human Genome
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Name: PRR5 Sequence: fasta or formatted (379aa) NCBI GI: 66346654
Description:

proline rich 5 (renal) isoform 2

Referenced in:

Kidney
mTOR Pathway

Other entries for this name:
alt mRNA [379aa] proline rich 5 (renal) isoform 2
alt prot [388aa] proline rich 5 (renal) isoform 1
alt prot [293aa] proline rich 5 (renal) isoform 3
alt prot [293aa] proline rich 5 (renal) isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         23           4
 C cysteine            1.1          4           1
 D aspartate           4.5         17           1
 E glutamate           6.6         25           1
 F phenylalanine       4.0         15           3
 G glycine             8.4         32           2
 H histidine           2.4          9           1
 I isoleucine          3.2         12           1
 K lysine              3.2         12           1
 L leucine            11.3         43           2
 M methionine          1.6          6           1
 N asparagine          2.6         10           1
 P proline             7.4         28           2
 Q glutamine           5.5         21           2
 R arginine            7.4         28           2
 S serine             10.6         40           2
 T threonine           5.0         19           2
 V valine              6.6         25           2
 W tryptophan          0.5          2           1
 Y tyrosine            2.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proline rich 5 (renal) isoform 2 
PRR5                  1.000   proline rich 5 (renal) isoform 1 
PRR5                  1.000   proline rich 5 (renal) isoform 2 
PRR5                  0.769   proline rich 5 (renal) isoform 3 
PRR5                  0.769   proline rich 5 (renal) isoform 3 
PRR5L                 0.272   protor-2 isoform a 
PRR5L                 0.272   protor-2 isoform a 
LOC553158             0.234   PRR5-ARHGAP8 fusion protein 
PRR5L                 0.202   protor-2 isoform c 
PRR5L                 0.123   protor-2 isoform b 
EML3                  0.019   echinoderm microtubule associated protein like 3 [H...
DCAF10                0.015   WD repeat domain 32 
FARP1                 0.015   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
NR1D1                 0.015   nuclear receptor subfamily 1, group D, member 1 [Hom...
GPR152                0.015   G protein-coupled receptor 152 
SF1                   0.014   splicing factor 1 isoform 3 
SF1                   0.014   splicing factor 1 isoform 2 
SF1                   0.014   splicing factor 1 isoform 1 
HCN4                  0.014   hyperpolarization activated cyclic nucleotide-gated p...
NHSL1                 0.012   NHS-like 1 
NR5A1                 0.012   nuclear receptor subfamily 5, group A, member 1 [Hom...
SPEG                  0.012   SPEG complex locus 
SGIP1                 0.012   SH3-domain GRB2-like (endophilin) interacting prote...
SMARCA4               0.011   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.011   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.011   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.011   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.011   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.011   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.011   SWI/SNF-related matrix-associated actin-dependent re...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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