Guide to the Human Genome
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Name: PRR5 Sequence: fasta or formatted (293aa) NCBI GI: 66346658
Description:

proline rich 5 (renal) isoform 3

Referenced in:

Kidney
mTOR Pathway

Other entries for this name:
alt prot [379aa] proline rich 5 (renal) isoform 2
alt prot [388aa] proline rich 5 (renal) isoform 1
alt prot [379aa] proline rich 5 (renal) isoform 2
alt mRNA [293aa] proline rich 5 (renal) isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         15           3
 C cysteine            1.0          3           1
 D aspartate           4.8         14           1
 E glutamate           6.5         19           1
 F phenylalanine       3.8         11           3
 G glycine             8.5         25           2
 H histidine           2.7          8           1
 I isoleucine          3.4         10           1
 K lysine              2.7          8           1
 L leucine            10.9         32           2
 M methionine          1.7          5           1
 N asparagine          1.7          5           1
 P proline             8.5         25           2
 Q glutamine           4.8         14           1
 R arginine            7.5         22           2
 S serine             11.3         33           2
 T threonine           4.8         14           2
 V valine              7.5         22           2
 W tryptophan          0.3          1           1
 Y tyrosine            2.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proline rich 5 (renal) isoform 3 
PRR5                  1.000   proline rich 5 (renal) isoform 3 
PRR5                  1.000   proline rich 5 (renal) isoform 2 
PRR5                  1.000   proline rich 5 (renal) isoform 1 
PRR5                  1.000   proline rich 5 (renal) isoform 2 
PRR5L                 0.221   protor-2 isoform a 
PRR5L                 0.221   protor-2 isoform a 
PRR5L                 0.132   protor-2 isoform c 
PRR5L                 0.100   protor-2 isoform b 
EML3                  0.025   echinoderm microtubule associated protein like 3 [H...
DCAF10                0.020   WD repeat domain 32 
FARP1                 0.020   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
NR1D1                 0.020   nuclear receptor subfamily 1, group D, member 1 [Hom...
GPR152                0.020   G protein-coupled receptor 152 
SF1                   0.018   splicing factor 1 isoform 3 
SF1                   0.018   splicing factor 1 isoform 2 
SF1                   0.018   splicing factor 1 isoform 1 
HCN4                  0.018   hyperpolarization activated cyclic nucleotide-gated p...
NHSL1                 0.016   NHS-like 1 
NR5A1                 0.016   nuclear receptor subfamily 5, group A, member 1 [Hom...
SPEG                  0.016   SPEG complex locus 
SGIP1                 0.016   SH3-domain GRB2-like (endophilin) interacting prote...
SMARCA4               0.014   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.014   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.014   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.014   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.014   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.014   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.014   SWI/SNF-related matrix-associated actin-dependent re...
CREBBP                0.014   CREB binding protein isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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