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Search of human proteins with 237649012
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|237649012 EBNA1 binding protein 2 isoform 1 [Homo sapiens]
(361 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|237649012 EBNA1 binding protein 2 isoform 1 [Homo sapiens] 726 0.0
gi|237649015 EBNA1 binding protein 2 isoform 2 [Homo sapiens] 612 e-175
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 42 7e-04
gi|4507693 tuberous sclerosis 1 protein isoform 1 [Homo sapiens] 39 0.009
gi|241666464 tuberous sclerosis 1 protein isoform 4 [Homo sapiens] 39 0.009
gi|241666462 tuberous sclerosis 1 protein isoform 3 [Homo sapiens] 39 0.009
gi|16262452 cingulin [Homo sapiens] 38 0.016
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 37 0.021
gi|112789536 troponin T3, skeletal, fast isoform 3 [Homo sapiens] 37 0.021
gi|112789541 troponin T3, skeletal, fast isoform 4 [Homo sapiens] 37 0.021
gi|31377634 guanylate binding protein 4 [Homo sapiens] 37 0.036
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 36 0.047
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 36 0.047
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 36 0.047
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 36 0.047
gi|20127519 TPX2, microtubule-associated protein homolog [Homo s... 36 0.047
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 36 0.047
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 35 0.080
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens] 35 0.10
gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens] 35 0.10
gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens] 35 0.10
gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens] 35 0.10
gi|194294523 intersectin 2 isoform 3 [Homo sapiens] 35 0.10
gi|156151394 heterogeneous nuclear ribonucleoprotein R isoform 1... 35 0.14
gi|5031755 heterogeneous nuclear ribonucleoprotein R isoform 2 [... 35 0.14
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 34 0.18
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 34 0.18
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 34 0.18
gi|52426743 cisplatin resistance-associated overexpressed protei... 34 0.23
gi|19923485 cisplatin resistance-associated overexpressed protei... 34 0.23
>gi|237649012 EBNA1 binding protein 2 isoform 1 [Homo sapiens]
Length = 361
Score = 726 bits (1874), Expect = 0.0
Identities = 361/361 (100%), Positives = 361/361 (100%)
Query: 1 MYPEALPVGILSNPDTFKRRSGSYSNDKPEVWFAAGSGSPNQKLSSSCVGRACGEMDTPP 60
MYPEALPVGILSNPDTFKRRSGSYSNDKPEVWFAAGSGSPNQKLSSSCVGRACGEMDTPP
Sbjct: 1 MYPEALPVGILSNPDTFKRRSGSYSNDKPEVWFAAGSGSPNQKLSSSCVGRACGEMDTPP 60
Query: 61 LSDSESESDESLVTDRELQDAFSRGLLKPGLNVVLEGPKKAVNDVNGLKQCLAEFKRDLE 120
LSDSESESDESLVTDRELQDAFSRGLLKPGLNVVLEGPKKAVNDVNGLKQCLAEFKRDLE
Sbjct: 61 LSDSESESDESLVTDRELQDAFSRGLLKPGLNVVLEGPKKAVNDVNGLKQCLAEFKRDLE 120
Query: 121 WVERLDVTLGPVPEIGGSEAPAPQNKDQKAVDPEDDFQREMSFYRQAQAAVLAVLPRLHQ 180
WVERLDVTLGPVPEIGGSEAPAPQNKDQKAVDPEDDFQREMSFYRQAQAAVLAVLPRLHQ
Sbjct: 121 WVERLDVTLGPVPEIGGSEAPAPQNKDQKAVDPEDDFQREMSFYRQAQAAVLAVLPRLHQ 180
Query: 181 LKVPTKRPTDYFAEMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVL 240
LKVPTKRPTDYFAEMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVL
Sbjct: 181 LKVPTKRPTDYFAEMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVL 240
Query: 241 QKRQQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKN 300
QKRQQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKN
Sbjct: 241 QKRQQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKN 300
Query: 301 QKFGFGGKKKGSKWNTRESYDDVSSFRAKTAHGRGLKRPGKKGSNKRPGKRTREKMKNRT 360
QKFGFGGKKKGSKWNTRESYDDVSSFRAKTAHGRGLKRPGKKGSNKRPGKRTREKMKNRT
Sbjct: 301 QKFGFGGKKKGSKWNTRESYDDVSSFRAKTAHGRGLKRPGKKGSNKRPGKRTREKMKNRT 360
Query: 361 H 361
H
Sbjct: 361 H 361
>gi|237649015 EBNA1 binding protein 2 isoform 2 [Homo sapiens]
Length = 306
Score = 612 bits (1578), Expect = e-175
Identities = 306/306 (100%), Positives = 306/306 (100%)
Query: 56 MDTPPLSDSESESDESLVTDRELQDAFSRGLLKPGLNVVLEGPKKAVNDVNGLKQCLAEF 115
MDTPPLSDSESESDESLVTDRELQDAFSRGLLKPGLNVVLEGPKKAVNDVNGLKQCLAEF
Sbjct: 1 MDTPPLSDSESESDESLVTDRELQDAFSRGLLKPGLNVVLEGPKKAVNDVNGLKQCLAEF 60
Query: 116 KRDLEWVERLDVTLGPVPEIGGSEAPAPQNKDQKAVDPEDDFQREMSFYRQAQAAVLAVL 175
KRDLEWVERLDVTLGPVPEIGGSEAPAPQNKDQKAVDPEDDFQREMSFYRQAQAAVLAVL
Sbjct: 61 KRDLEWVERLDVTLGPVPEIGGSEAPAPQNKDQKAVDPEDDFQREMSFYRQAQAAVLAVL 120
Query: 176 PRLHQLKVPTKRPTDYFAEMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKV 235
PRLHQLKVPTKRPTDYFAEMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKV
Sbjct: 121 PRLHQLKVPTKRPTDYFAEMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKV 180
Query: 236 QTEVLQKRQQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAK 295
QTEVLQKRQQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAK
Sbjct: 181 QTEVLQKRQQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAK 240
Query: 296 RRYKNQKFGFGGKKKGSKWNTRESYDDVSSFRAKTAHGRGLKRPGKKGSNKRPGKRTREK 355
RRYKNQKFGFGGKKKGSKWNTRESYDDVSSFRAKTAHGRGLKRPGKKGSNKRPGKRTREK
Sbjct: 241 RRYKNQKFGFGGKKKGSKWNTRESYDDVSSFRAKTAHGRGLKRPGKKGSNKRPGKRTREK 300
Query: 356 MKNRTH 361
MKNRTH
Sbjct: 301 MKNRTH 306
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 42.4 bits (98), Expect = 7e-04
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 197 KSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKK 256
K + + ++ R++ + K+ ER +K K+ R R+ GK+ + + ++ +Q K +K
Sbjct: 37 KKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRK 96
Query: 257 YQKGFSDKLDFLEG--DQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQKFGFGGKKKGSKW 314
+K + G ++K +RK+ + +Q R+ KRR K ++ K+ +
Sbjct: 97 RKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRR------KERKRE 150
Query: 315 NTRESYDDVSSFRAKTAHGRGLKRPGKKGSNKRPGKRTREKMKNR 359
R + R K + +R K+ +R K RE+ K R
Sbjct: 151 KERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKER 195
Score = 37.0 bits (84), Expect = 0.027
Identities = 34/174 (19%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 186 KRPTDYFAEMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQ 245
KR + + + + +K +++ + K+ +R E+ KQ + R+ ++ + + +KR++
Sbjct: 47 KREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRER 106
Query: 246 EKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQKFGF 305
++ KK ++ ++ + ++K +RKK K ++ K + R
Sbjct: 107 KQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRER-------- 158
Query: 306 GGKKKGSKWNTRESYDDVSSFRAKTAHGRGLKRPGKKGSNKRPGKRTREKMKNR 359
K+K K RE + + K R +R KK K+ ++ +E+ K+R
Sbjct: 159 --KRKKRKKEEREKKRERNRKERKKERERKERRERKK-ERKKERRKKKERKKDR 209
Score = 34.7 bits (78), Expect = 0.14
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 197 KSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKK 256
K + ++Q + +K SE+ K+ R K +K + E +KR++ K KK
Sbjct: 12 KLNTELQMVSCSHISKPCTQRESERKKERREREK--RKREREKERKRERGKKEKKKR-KK 68
Query: 257 YQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQKFGFGGKKKGSKWNT 316
++G + E ++ QRK+ K ++ RK K+R + Q+ G +KK +
Sbjct: 69 RERGKERERKRKEREK----QRKERREKERRKRK-KEKKKRERKQR-GRRERKKKKERKE 122
Query: 317 RESYDDVSSFRAKTAHGRGLKRPGKKGSNKRPGKRTREKMKNR 359
RE ++ K R KR ++ K GKR R++ K +
Sbjct: 123 RER-ENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRK 164
>gi|4507693 tuberous sclerosis 1 protein isoform 1 [Homo sapiens]
Length = 1164
Score = 38.5 bits (88), Expect = 0.009
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 116 KRDLEWVERLDVTLGPVPEIGGSEAPAPQNKDQKAVDPEDDFQREMSFYRQAQAAVLAVL 175
++ +E++ R + LG V E+ + + K V+ + ++ ++ + VL
Sbjct: 842 QQQMEFLNRQLLVLGEVNELYLEQLQNKHSDTTKEVE-----MMKAAYRKELEKNRSHVL 896
Query: 176 PRLHQLKVPTKRPTDYFAEMAKSD---LQMQKIRQ--KLQTK---QAAMERSEKAK---- 223
+ +L KR + + +AK D L+ +K + KLQ + QAA R E K
Sbjct: 897 QQTQRLDTSQKRILELESHLAKKDHLLLEQKKYLEDVKLQARGQLQAAESRYEAQKRITQ 956
Query: 224 --QLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKA 281
+L L YG+ + +L+K ++EKA A ++ +D D + +
Sbjct: 957 VFELEILDLYGRLEKDGLLKKLEEEKAEAAEAAEERLDCCNDGC----SDSMVGHNEEAS 1012
Query: 282 GAKGQQMRKGPSAKRRYKNQKFGFGGKKKGSKWNTRE 318
G G+ PS+ R + G G S+ +T E
Sbjct: 1013 GHNGETKTPRPSSARGSSGSRGGGGSSSSSSELSTPE 1049
>gi|241666464 tuberous sclerosis 1 protein isoform 4 [Homo sapiens]
Length = 1113
Score = 38.5 bits (88), Expect = 0.009
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 116 KRDLEWVERLDVTLGPVPEIGGSEAPAPQNKDQKAVDPEDDFQREMSFYRQAQAAVLAVL 175
++ +E++ R + LG V E+ + + K V+ + ++ ++ + VL
Sbjct: 791 QQQMEFLNRQLLVLGEVNELYLEQLQNKHSDTTKEVE-----MMKAAYRKELEKNRSHVL 845
Query: 176 PRLHQLKVPTKRPTDYFAEMAKSD---LQMQKIRQ--KLQTK---QAAMERSEKAK---- 223
+ +L KR + + +AK D L+ +K + KLQ + QAA R E K
Sbjct: 846 QQTQRLDTSQKRILELESHLAKKDHLLLEQKKYLEDVKLQARGQLQAAESRYEAQKRITQ 905
Query: 224 --QLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKA 281
+L L YG+ + +L+K ++EKA A ++ +D D + +
Sbjct: 906 VFELEILDLYGRLEKDGLLKKLEEEKAEAAEAAEERLDCCNDGC----SDSMVGHNEEAS 961
Query: 282 GAKGQQMRKGPSAKRRYKNQKFGFGGKKKGSKWNTRE 318
G G+ PS+ R + G G S+ +T E
Sbjct: 962 GHNGETKTPRPSSARGSSGSRGGGGSSSSSSELSTPE 998
>gi|241666462 tuberous sclerosis 1 protein isoform 3 [Homo sapiens]
Length = 1163
Score = 38.5 bits (88), Expect = 0.009
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 116 KRDLEWVERLDVTLGPVPEIGGSEAPAPQNKDQKAVDPEDDFQREMSFYRQAQAAVLAVL 175
++ +E++ R + LG V E+ + + K V+ + ++ ++ + VL
Sbjct: 841 QQQMEFLNRQLLVLGEVNELYLEQLQNKHSDTTKEVE-----MMKAAYRKELEKNRSHVL 895
Query: 176 PRLHQLKVPTKRPTDYFAEMAKSD---LQMQKIRQ--KLQTK---QAAMERSEKAK---- 223
+ +L KR + + +AK D L+ +K + KLQ + QAA R E K
Sbjct: 896 QQTQRLDTSQKRILELESHLAKKDHLLLEQKKYLEDVKLQARGQLQAAESRYEAQKRITQ 955
Query: 224 --QLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKA 281
+L L YG+ + +L+K ++EKA A ++ +D D + +
Sbjct: 956 VFELEILDLYGRLEKDGLLKKLEEEKAEAAEAAEERLDCCNDGC----SDSMVGHNEEAS 1011
Query: 282 GAKGQQMRKGPSAKRRYKNQKFGFGGKKKGSKWNTRE 318
G G+ PS+ R + G G S+ +T E
Sbjct: 1012 GHNGETKTPRPSSARGSSGSRGGGGSSSSSSELSTPE 1048
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 37.7 bits (86), Expect = 0.016
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 25/231 (10%)
Query: 61 LSDSESESDESLVTDRELQ---DAFSRGLLKPG-----LNVVLEGPKKAVNDVNGLKQCL 112
L+ S+ E R L+ + RGL + G LN LE K + K L
Sbjct: 781 LNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAEL 840
Query: 113 AEFKRDLE-WVERLDVTLGPVPEIGGSEAPAPQNKDQKAVDPEDDFQREMSFYRQAQAAV 171
E KR L+ V+RL+ L +IG A Q + D ++ +RE++ AQ
Sbjct: 841 EEQKRLLDRTVDRLNKEL---EKIGEDSKQALQQLQAQLEDYKEKARREVA---DAQ--- 891
Query: 172 LAVLPRLHQLKVPTKRPTDYFAEMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKY 231
Q K +++ ++Q++RQ LQ QA + + K+L A R
Sbjct: 892 -------RQAKDWASEAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQ 944
Query: 232 GKKVQTEVLQKRQQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKAG 282
G + + E ++ Q ++A + +++ +LD + + L R G
Sbjct: 945 GLEQEAENKKRSQDDRARQLKGLEEKVSRLETELDEEKNTVELLTDRVNRG 995
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 37.4 bits (85), Expect = 0.021
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 11/154 (7%)
Query: 203 QKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGFS 262
QK K E+ +KA A + GKK + + R E K Q+
Sbjct: 158 QKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSRGDEDK------KGRQREAK 211
Query: 263 DKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAK---RRYKNQKFGFGGKKKGSKWNTRES 319
+ G ++ +R K A G + R+G K +R + QK GGK + K +R
Sbjct: 212 SRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGK--SRGG 269
Query: 320 YDDVSSFRAKTAHGRGLKRPGKKGSNKRPGKRTR 353
D + + A G KR G + ++P + R
Sbjct: 270 GDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGR 303
Score = 30.0 bits (66), Expect = 3.4
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 270 GDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQKFGFGGKKKGSKWNTRESYDDVSSFRA- 328
GD++P Q+ AG + R G K+ ++ + G G K + W R D ++ +A
Sbjct: 591 GDKQPGWQKAAAGVT--KSRSGDGGKKAWRQKAAGTGAKSRKKPWR-RGQKDAAAAEKAW 647
Query: 329 ---KTAHGRGLKRP 339
T+ G G K+P
Sbjct: 648 ATGATSRGSGGKQP 661
>gi|112789536 troponin T3, skeletal, fast isoform 3 [Homo sapiens]
Length = 250
Score = 37.4 bits (85), Expect = 0.021
Identities = 33/171 (19%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 198 SDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKY-------GKKVQTEVLQKRQQEK--A 248
SD +++++ ++ + ++ A E E ++ + K G+KV + +QK++Q K
Sbjct: 2 SDEEVEQVEEQYEEEEEAQEEEEVQEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNKDLM 61
Query: 249 HMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQKFGFGGK 308
+ I + + + + L ++ + +R+ A+ Q++R + K R + +
Sbjct: 62 ELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIR---AEKERERQNRLAEEKA 118
Query: 309 KKGSKWNTRESYDDVSSFRAKTAHGRGLKRPGKKGSNKRPGKRTREKMKNR 359
++ + R + DD+ +A ++ G K KR K+T +MK +
Sbjct: 119 RREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKK 169
>gi|112789541 troponin T3, skeletal, fast isoform 4 [Homo sapiens]
Length = 250
Score = 37.4 bits (85), Expect = 0.021
Identities = 33/171 (19%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 198 SDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKY-------GKKVQTEVLQKRQQEK--A 248
SD +++++ ++ + ++ A E E ++ + K G+KV + +QK++Q K
Sbjct: 2 SDEEVEQVEEQYEEEEEAQEEEEVQEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNKDLM 61
Query: 249 HMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQKFGFGGK 308
+ I + + + + L ++ + +R+ A+ Q++R + K R + +
Sbjct: 62 ELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIR---AEKERERQNRLAEEKA 118
Query: 309 KKGSKWNTRESYDDVSSFRAKTAHGRGLKRPGKKGSNKRPGKRTREKMKNR 359
++ + R + DD+ +A ++ G K KR K+T +MK +
Sbjct: 119 RREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKK 169
>gi|31377634 guanylate binding protein 4 [Homo sapiens]
Length = 640
Score = 36.6 bits (83), Expect = 0.036
Identities = 41/195 (21%), Positives = 79/195 (40%), Gaps = 17/195 (8%)
Query: 65 ESESDESLVTDRELQDAFSRGLLKPGLNVVLEGPKKAVNDVNGLKQCLAEFKRDLEWVER 124
E + + ++ + E + + LK + E + + V G E K+ +EW +
Sbjct: 403 EKKKGDFVLQNEEASAKYCQAELKRLSEHLTESILRGIFSVPGGHNLYLEEKKQVEWDYK 462
Query: 125 LDVTLGPVPEIGGSEAPAPQNKDQKAVDPEDDFQREMSFYRQAQAAVLAVLPRLHQLKVP 184
L VP G QN Q V E+ + + A+ A +K
Sbjct: 463 L------VPRKGVKANEVLQNFLQSQVVVEESILQSDKALTAGEKAIAAE----RAMKEA 512
Query: 185 TKRPTDYFAEMAKSDLQMQKIRQK-LQTKQAAMERSEKAKQLRALRKYGK------KVQT 237
++ + E K QM + +++ Q A ME+ + ++ LR++ + KVQ
Sbjct: 513 AEKEQELLREKQKEQQQMMEAQERSFQEYMAQMEKKLEEERENLLREHERLLKHKLKVQE 572
Query: 238 EVLQKRQQEKAHMMN 252
E+L++ Q+K+ +N
Sbjct: 573 EMLKEEFQKKSEQLN 587
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sapiens]
Length = 1293
Score = 36.2 bits (82), Expect = 0.047
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 144 QNKDQKAVDPEDDFQREMSFYRQAQAAVLAVLPR------LHQLKVPTK----RPTDYFA 193
+ +++K + E Q+E+ RQ Q L L + L Q+K+P+ + ++ A
Sbjct: 872 EEEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTA 931
Query: 194 EMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNA 253
+++ L + +I QKL+ ++ R E+ +Q R L K LQ++QQ++ ++
Sbjct: 932 CQSQATLSLAEI-QKLEEERERQLREEQRRQQRELMK--------ALQQQQQQQQQKLSG 982
Query: 254 IKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRR-YKNQKFGFGGKKKGS 312
K LE Q+ Q +K + QQ ++ A+ + N G GS
Sbjct: 983 WGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGS 1042
Score = 30.0 bits (66), Expect = 3.4
Identities = 21/101 (20%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 202 MQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGF 261
+++++Q + K A +E+ + ++RA R+ ++ + E L+++Q+E ++ ++
Sbjct: 717 LEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRR-- 774
Query: 262 SDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQK 302
+++ LA+RK+ A +Q R+ A RR + ++
Sbjct: 775 ---------EEEELARRKQEEALRRQ-REQEIALRRQREEE 805
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sapiens]
Length = 1320
Score = 36.2 bits (82), Expect = 0.047
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 144 QNKDQKAVDPEDDFQREMSFYRQAQAAVLAVLPR------LHQLKVPTK----RPTDYFA 193
+ +++K + E Q+E+ RQ Q L L + L Q+K+P+ + ++ A
Sbjct: 899 EEEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTA 958
Query: 194 EMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNA 253
+++ L + +I QKL+ ++ R E+ +Q R L K LQ++QQ++ ++
Sbjct: 959 CQSQATLSLAEI-QKLEEERERQLREEQRRQQRELMK--------ALQQQQQQQQQKLSG 1009
Query: 254 IKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRR-YKNQKFGFGGKKKGS 312
K LE Q+ Q +K + QQ ++ A+ + N G GS
Sbjct: 1010 WGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGS 1069
Score = 30.0 bits (66), Expect = 3.4
Identities = 21/101 (20%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 202 MQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGF 261
+++++Q + K A +E+ + ++RA R+ ++ + E L+++Q+E ++ ++
Sbjct: 744 LEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRR-- 801
Query: 262 SDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQK 302
+++ LA+RK+ A +Q R+ A RR + ++
Sbjct: 802 ---------EEEELARRKQEEALRRQ-REQEIALRRQREEE 832
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sapiens]
Length = 1299
Score = 36.2 bits (82), Expect = 0.047
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 144 QNKDQKAVDPEDDFQREMSFYRQAQAAVLAVLPR------LHQLKVPTK----RPTDYFA 193
+ +++K + E Q+E+ RQ Q L L + L Q+K+P+ + ++ A
Sbjct: 878 EEEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTA 937
Query: 194 EMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNA 253
+++ L + +I QKL+ ++ R E+ +Q R L K LQ++QQ++ ++
Sbjct: 938 CQSQATLSLAEI-QKLEEERERQLREEQRRQQRELMK--------ALQQQQQQQQQKLSG 988
Query: 254 IKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRR-YKNQKFGFGGKKKGS 312
K LE Q+ Q +K + QQ ++ A+ + N G GS
Sbjct: 989 WGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGS 1048
Score = 30.0 bits (66), Expect = 3.4
Identities = 21/101 (20%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 202 MQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGF 261
+++++Q + K A +E+ + ++RA R+ ++ + E L+++Q+E ++ ++
Sbjct: 723 LEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRR-- 780
Query: 262 SDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQK 302
+++ LA+RK+ A +Q R+ A RR + ++
Sbjct: 781 ---------EEEELARRKQEEALRRQ-REQEIALRRQREEE 811
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapiens]
Length = 1299
Score = 36.2 bits (82), Expect = 0.047
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 144 QNKDQKAVDPEDDFQREMSFYRQAQAAVLAVLPR------LHQLKVPTK----RPTDYFA 193
+ +++K + E Q+E+ RQ Q L L + L Q+K+P+ + ++ A
Sbjct: 878 EEEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQLAQMKLPSSSTWGQQSNTTA 937
Query: 194 EMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNA 253
+++ L + +I QKL+ ++ R E+ +Q R L K LQ++QQ++ ++
Sbjct: 938 CQSQATLSLAEI-QKLEEERERQLREEQRRQQRELMK--------ALQQQQQQQQQKLSG 988
Query: 254 IKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRR-YKNQKFGFGGKKKGS 312
K LE Q+ Q +K + QQ ++ A+ + N G GS
Sbjct: 989 WGNVSKPSGTTKSLLEIQQEEARQMQKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGS 1048
Score = 30.0 bits (66), Expect = 3.4
Identities = 21/101 (20%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 202 MQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGF 261
+++++Q + K A +E+ + ++RA R+ ++ + E L+++Q+E ++ ++
Sbjct: 723 LEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRR-- 780
Query: 262 SDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQK 302
+++ LA+RK+ A +Q R+ A RR + ++
Sbjct: 781 ---------EEEELARRKQEEALRRQ-REQEIALRRQREEE 811
>gi|20127519 TPX2, microtubule-associated protein homolog [Homo
sapiens]
Length = 747
Score = 36.2 bits (82), Expect = 0.047
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 204 KIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQ 258
K RQ+L+ + A +E ++KA+QL R ++ + E L + ++E H N I+KYQ
Sbjct: 669 KERQELEKRMAEVE-AQKAQQLEEARLQEEEQKKEELARLRRELVHKANPIRKYQ 722
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 36.2 bits (82), Expect = 0.047
Identities = 36/169 (21%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 194 EMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNA 253
E K D + K+R+ + ++ + +++KQ + RK+ + E ++ + ++ A
Sbjct: 239 ERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKF----EEETVKSKVTVDTGVIPA 294
Query: 254 IKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQ---QMRKGPSAKRRYKNQKFGFGGKKK 310
++ + + D EGD+K ++KK G K + + +KGPS K K + K+
Sbjct: 295 SEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPS-KATVKAMQEALAKLKE 353
Query: 311 GSKWNTRESYDDVSSFRAKTAHGRGLKR--PGKKGSNKRPGKRTREKMK 357
+ RE + + A + +R K+ K+ K +E++K
Sbjct: 354 EEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLK 402
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 35.4 bits (80), Expect = 0.080
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 201 QMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIK----- 255
+ +K R++ + ++ E+ K ++ + +K +K + +KR++EK + K
Sbjct: 58 ERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKK 117
Query: 256 --KYQKGFSDK--LDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQKFGFGGKKKG 311
K ++G + K + +++ +RK+ K ++ K K R K ++ G K++
Sbjct: 118 KEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEE 177
Query: 312 SKWNTRESYDDVSSFRAKTAHGRGLK-RPGKKGSNKRPGKRTREKMKNR 359
K R+ R + R K R +K K+ +R +E+ K+R
Sbjct: 178 RKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDR 226
Score = 32.3 bits (72), Expect = 0.68
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Query: 217 ERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLA 276
E E+ +++ RK GKK + +K ++E+ +K +K K + +G++K
Sbjct: 37 EIREREREIET-RKEGKKERESERKKERREREKRKREREKERKRERGKKE-KKGERKKEE 94
Query: 277 QRKKAGAKGQQMRKGPSAKRRYKNQKFGFGGKKKGSKWNTR--ESYDDVSSFRAKTAHGR 334
+ +K + ++ ++G ++R K +K G K K R E + R + R
Sbjct: 95 RERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEER 154
Query: 335 GLKRPGKKGSNKRPGKRTREKMKNR 359
+R +K KR K+ EK + R
Sbjct: 155 EKERE-RKERKKRERKQVGEKEEER 178
Score = 29.3 bits (64), Expect = 5.7
Identities = 22/111 (19%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 203 QKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGFS 262
++ R++ + ++ E EK ++ + +K +K +V +K ++ K KK ++
Sbjct: 138 ERKREERKERERKKEEREKERERKERKKRERK---QVGEKEEERKEKERKERKKRERNRK 194
Query: 263 DKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQKFGFGGKKKGSK 313
++ E ++K +RKK ++ +K K R K+++ + K++G +
Sbjct: 195 ERKK--ERERKERRERKK-----ERKKKEERKKERQKDRQTNWREKERGKR 238
>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
Length = 1312
Score = 35.0 bits (79), Expect = 0.10
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 202 MQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKR-QQEKAHMMNAIKKYQKG 260
MQ +R++ + +QA E+ K KQL R Q+E LQ++ QQE A++ + ++ Q+
Sbjct: 433 MQALRREEERRQAEREQEYKRKQLEEQR------QSERLQRQLQQEHAYLKSLQQQQQQQ 486
Query: 261 FSDK---LDFLEGDQKPL 275
K L GD+KPL
Sbjct: 487 QLQKQQQQQLLPGDRKPL 504
>gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens]
Length = 1303
Score = 35.0 bits (79), Expect = 0.10
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 202 MQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKR-QQEKAHMMNAIKKYQKG 260
MQ +R++ + +QA E+ K KQL R Q+E LQ++ QQE A++ + ++ Q+
Sbjct: 433 MQALRREEERRQAEREQEYKRKQLEEQR------QSERLQRQLQQEHAYLKSLQQQQQQQ 486
Query: 261 FSDK---LDFLEGDQKPL 275
K L GD+KPL
Sbjct: 487 QLQKQQQQQLLPGDRKPL 504
>gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens]
Length = 1332
Score = 35.0 bits (79), Expect = 0.10
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 202 MQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKR-QQEKAHMMNAIKKYQKG 260
MQ +R++ + +QA E+ K KQL R Q+E LQ++ QQE A++ + ++ Q+
Sbjct: 433 MQALRREEERRQAEREQEYKRKQLEEQR------QSERLQRQLQQEHAYLKSLQQQQQQQ 486
Query: 261 FSDK---LDFLEGDQKPL 275
K L GD+KPL
Sbjct: 487 QLQKQQQQQLLPGDRKPL 504
>gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens]
Length = 1295
Score = 35.0 bits (79), Expect = 0.10
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 202 MQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKR-QQEKAHMMNAIKKYQKG 260
MQ +R++ + +QA E+ K KQL R Q+E LQ++ QQE A++ + ++ Q+
Sbjct: 433 MQALRREEERRQAEREQEYKRKQLEEQR------QSERLQRQLQQEHAYLKSLQQQQQQQ 486
Query: 261 FSDK---LDFLEGDQKPL 275
K L GD+KPL
Sbjct: 487 QLQKQQQQQLLPGDRKPL 504
>gi|194294523 intersectin 2 isoform 3 [Homo sapiens]
Length = 1670
Score = 35.0 bits (79), Expect = 0.10
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 180 QLKVPTKRPTDYFAEMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEV 239
QL K +EM + Q++++R+ T+Q A+E+ K K R K ++ + E+
Sbjct: 598 QLDALEKETASKLSEMDSFNNQLKELRETYNTQQLALEQLYKIK--RDKLKEIERKRLEL 655
Query: 240 LQKRQQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRR 297
+QK++ E A + + + + L E +++ Q +K K Q+ + K+R
Sbjct: 656 MQKKKLEDEAARKAKQGKENLWKENLRKEEEEKQKRLQEEKTQEKIQEEERKAEEKQR 713
>gi|156151394 heterogeneous nuclear ribonucleoprotein R isoform 1
[Homo sapiens]
Length = 636
Score = 34.7 bits (78), Expect = 0.14
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 20/110 (18%)
Query: 189 TDYFAEMAKSDLQMQKIRQKL----QTKQAA-MERSEKAKQLRALRKYGKKVQTEVLQK- 242
T+++ + ++ L QK+ ++L QT A ++ E+A + ALR++ ++ VLQ+
Sbjct: 27 TEHYKTLIEAGLP-QKVAERLDEIFQTGLVAYVDLDERA--IDALREFNEEGALSVLQQF 83
Query: 243 RQQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGP 292
++ + +H+ N K FL G K QR+K G+K Q+ KGP
Sbjct: 84 KESDLSHVQN-----------KSAFLCGVMKTYRQREKQGSKVQESTKGP 122
>gi|5031755 heterogeneous nuclear ribonucleoprotein R isoform 2
[Homo sapiens]
Length = 633
Score = 34.7 bits (78), Expect = 0.14
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 20/110 (18%)
Query: 189 TDYFAEMAKSDLQMQKIRQKL----QTKQAA-MERSEKAKQLRALRKYGKKVQTEVLQK- 242
T+++ + ++ L QK+ ++L QT A ++ E+A + ALR++ ++ VLQ+
Sbjct: 27 TEHYKTLIEAGLP-QKVAERLDEIFQTGLVAYVDLDERA--IDALREFNEEGALSVLQQF 83
Query: 243 RQQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGP 292
++ + +H+ N K FL G K QR+K G+K Q+ KGP
Sbjct: 84 KESDLSHVQN-----------KSAFLCGVMKTYRQREKQGSKVQESTKGP 122
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 34.3 bits (77), Expect = 0.18
Identities = 36/165 (21%), Positives = 77/165 (46%), Gaps = 25/165 (15%)
Query: 186 KRPTDYFAEMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQ--TEVLQKR 243
+R Y+ E K + + ++ +++ ++ ER+E+AK+ LR+Y ++V+ EV +K+
Sbjct: 801 ERRITYYRE--KEEEEQRRAEEQMLKEREERERAERAKREEELREYQERVKKLEEVERKK 858
Query: 244 QQEKAHMMNAIKKYQKGFSDKLDFLEGDQKPLAQRKKAGAKGQQ--MRKGPSAKRRYKNQ 301
+Q + + ++ ++ + GD + + G + + RKGP A ++
Sbjct: 859 RQRELEIEERERRREE------ERRLGDSSLSRKDSRWGDRDSEGTWRKGPEADSEWRR- 911
Query: 302 KFGFGGKKKGSKWNTRESYDDVSSFRAKTAHGRGLKRPGKKGSNK 346
G +K +W E D+ S H R +RP + G ++
Sbjct: 912 ----GPPEK--EWRRGEGRDEDRS------HRRDEERPRRLGDDE 944
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 34.3 bits (77), Expect = 0.18
Identities = 31/153 (20%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 203 QKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGFS 262
+K R++ + ++ ER K K R+ ++ E ++R++EK H + K+ +K
Sbjct: 396 EKEREREKEREKEKERG-KNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQD 454
Query: 263 DKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQKFGFGGKKKGSKWNTRESYDD 322
+ + + K + +++K K + + +A RR ++ +++ S+ ++R
Sbjct: 455 KEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRE--RRRRRSRSSSR----- 507
Query: 323 VSSFRAKTAHGRGLKRPGKKGSNKRPGKRTREK 355
S +KT + + P + NK+ KR +E+
Sbjct: 508 -SPRTSKTIKRKSSRSPSPRSRNKKDKKREKER 539
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 34.3 bits (77), Expect = 0.18
Identities = 31/153 (20%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 203 QKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGFS 262
+K R++ + ++ ER K K R+ ++ E ++R++EK H + K+ +K
Sbjct: 280 EKEREREKEREKEKERG-KNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQD 338
Query: 263 DKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQKFGFGGKKKGSKWNTRESYDD 322
+ + + K + +++K K + + +A RR ++ +++ S+ ++R
Sbjct: 339 KEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRE--RRRRRSRSSSR----- 391
Query: 323 VSSFRAKTAHGRGLKRPGKKGSNKRPGKRTREK 355
S +KT + + P + NK+ KR +E+
Sbjct: 392 -SPRTSKTIKRKSSRSPSPRSRNKKDKKREKER 423
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 33.9 bits (76), Expect = 0.23
Identities = 30/162 (18%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 203 QKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGFS 262
++++++ Q ++ + E+ ++ R ++ ++ + E + R +E+ + ++ S
Sbjct: 245 ERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTS 304
Query: 263 DKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQKFGFGGKKKGSKWNTRESYDD 322
D+ D K R++ ++ + R+ S R + + +++ SK R+SY
Sbjct: 305 DRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRR-SKSRDRKSYKH 363
Query: 323 VSSFRAKTAHGRGLKRPGKKGSNKRPG---KRTREKMKNRTH 361
S R + R K K+GS+ + +REK T+
Sbjct: 364 RSKSRDR-EQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTN 404
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 33.9 bits (76), Expect = 0.23
Identities = 30/162 (18%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 203 QKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQKGFS 262
++++++ Q ++ + E+ ++ R ++ ++ + E + R +E+ + ++ S
Sbjct: 245 ERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTS 304
Query: 263 DKLDFLEGDQKPLAQRKKAGAKGQQMRKGPSAKRRYKNQKFGFGGKKKGSKWNTRESYDD 322
D+ D K R++ ++ + R+ S R + + +++ SK R+SY
Sbjct: 305 DRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRR-SKSRDRKSYKH 363
Query: 323 VSSFRAKTAHGRGLKRPGKKGSNKRPG---KRTREKMKNRTH 361
S R + R K K+GS+ + +REK T+
Sbjct: 364 RSKSRDR-EQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTN 404
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,520,094
Number of Sequences: 37866
Number of extensions: 680948
Number of successful extensions: 2853
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 2672
Number of HSP's gapped (non-prelim): 321
length of query: 361
length of database: 18,247,518
effective HSP length: 104
effective length of query: 257
effective length of database: 14,309,454
effective search space: 3677529678
effective search space used: 3677529678
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.