Guide to the Human Genome
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Search of human proteins with 23346418

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23346418 MYC induced nuclear antigen isoform b [Homo
sapiens]
         (464 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23346418 MYC induced nuclear antigen isoform b [Homo sapiens]      944   0.0  
gi|110227621 MYC induced nuclear antigen isoform a [Homo sapiens]     940   0.0  
gi|110227619 MYC induced nuclear antigen isoform a [Homo sapiens]     940   0.0  
gi|106879206 chromosome 14 open reading frame 169 [Homo sapiens]      215   8e-56
gi|5454096 serine/threonine kinase 4 [Homo sapiens]                    33   0.42 
gi|103471999 serine/threonine kinase 3 [Homo sapiens]                  32   1.6  
gi|90903245 CD200 antigen isoform b [Homo sapiens]                     31   2.7  
gi|226246554 hypothetical protein LOC643677 [Homo sapiens]             30   3.6  
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap...    30   3.6  
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap...    30   3.6  
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap...    30   3.6  
gi|41393554 LUC7-like isoform b [Homo sapiens]                         30   3.6  
gi|8922297 LUC7-like isoform a [Homo sapiens]                          30   3.6  
gi|27735115 hypothetical protein LOC285051 [Homo sapiens]              30   4.6  
gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens]      30   6.1  
gi|189011544 ubiquitously transcribed tetratricopeptide repeat, ...    30   6.1  
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]         30   6.1  
gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens]      30   6.1  
gi|194239638 zinc finger protein 449 [Homo sapiens]                    30   6.1  
gi|33188431 tetratricopeptide repeat protein isoform 3 [Homo sap...    30   6.1  
gi|33188427 tetratricopeptide repeat protein isoform 2 [Homo sap...    30   6.1  
gi|154759242 olfactory receptor, family 2, subfamily A, member 2...    30   6.1  
gi|223890252 glutamate receptor interacting protein 1 [Homo sapi...    29   7.9  
gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor...    29   7.9  
gi|38348324 progestin and adipoQ receptor family member IX [Homo...    29   7.9  

>gi|23346418 MYC induced nuclear antigen isoform b [Homo sapiens]
          Length = 464

 Score =  944 bits (2441), Expect = 0.0
 Identities = 464/464 (100%), Positives = 464/464 (100%)

Query: 1   MPKKAKPTGSGKEEGPAPCKQMKLEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWE 60
           MPKKAKPTGSGKEEGPAPCKQMKLEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWE
Sbjct: 1   MPKKAKPTGSGKEEGPAPCKQMKLEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWE 60

Query: 61  QKPLLIQRDDPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAH 120
           QKPLLIQRDDPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAH
Sbjct: 61  QKPLLIQRDDPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAH 120

Query: 121 FLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHY 180
           FLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHY
Sbjct: 121 FLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHY 180

Query: 181 DDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIH 240
           DDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIH
Sbjct: 181 DDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIH 240

Query: 241 QADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAKEDVELRTGIPRQLLLVEST 300
           QADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAKEDVELRTGIPRQLLLVEST
Sbjct: 241 QADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAKEDVELRTGIPRQLLLVEST 300

Query: 301 TVATRRLSGFLRTLADRLEGTKELLSSDMKKDFIMHRLPPYSAGDGAELSTPGGKLPRLD 360
           TVATRRLSGFLRTLADRLEGTKELLSSDMKKDFIMHRLPPYSAGDGAELSTPGGKLPRLD
Sbjct: 301 TVATRRLSGFLRTLADRLEGTKELLSSDMKKDFIMHRLPPYSAGDGAELSTPGGKLPRLD 360

Query: 361 SVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLKNSRETHMMGNEEETEFHGLRFPL 420
           SVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLKNSRETHMMGNEEETEFHGLRFPL
Sbjct: 361 SVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLKNSRETHMMGNEEETEFHGLRFPL 420

Query: 421 SHLDALKQIWNSPAISVKDLKLTTDEEKESLVLSLWTECLIQVV 464
           SHLDALKQIWNSPAISVKDLKLTTDEEKESLVLSLWTECLIQVV
Sbjct: 421 SHLDALKQIWNSPAISVKDLKLTTDEEKESLVLSLWTECLIQVV 464


>gi|110227621 MYC induced nuclear antigen isoform a [Homo sapiens]
          Length = 465

 Score =  940 bits (2429), Expect = 0.0
 Identities = 464/465 (99%), Positives = 464/465 (99%), Gaps = 1/465 (0%)

Query: 1   MPKKAKPTGSGKEEGPAPCKQMKLEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWE 60
           MPKKAKPTGSGKEEGPAPCKQMKLEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWE
Sbjct: 1   MPKKAKPTGSGKEEGPAPCKQMKLEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWE 60

Query: 61  QKPLLIQRDDPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAH 120
           QKPLLIQRDDPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAH
Sbjct: 61  QKPLLIQRDDPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAH 120

Query: 121 FLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHY 180
           FLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHY
Sbjct: 121 FLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHY 180

Query: 181 DDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIH 240
           DDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIH
Sbjct: 181 DDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIH 240

Query: 241 QADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAKEDVELRTGIPRQLLL-VES 299
           QADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAKEDVELRTGIPRQLLL VES
Sbjct: 241 QADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAKEDVELRTGIPRQLLLQVES 300

Query: 300 TTVATRRLSGFLRTLADRLEGTKELLSSDMKKDFIMHRLPPYSAGDGAELSTPGGKLPRL 359
           TTVATRRLSGFLRTLADRLEGTKELLSSDMKKDFIMHRLPPYSAGDGAELSTPGGKLPRL
Sbjct: 301 TTVATRRLSGFLRTLADRLEGTKELLSSDMKKDFIMHRLPPYSAGDGAELSTPGGKLPRL 360

Query: 360 DSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLKNSRETHMMGNEEETEFHGLRFP 419
           DSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLKNSRETHMMGNEEETEFHGLRFP
Sbjct: 361 DSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLKNSRETHMMGNEEETEFHGLRFP 420

Query: 420 LSHLDALKQIWNSPAISVKDLKLTTDEEKESLVLSLWTECLIQVV 464
           LSHLDALKQIWNSPAISVKDLKLTTDEEKESLVLSLWTECLIQVV
Sbjct: 421 LSHLDALKQIWNSPAISVKDLKLTTDEEKESLVLSLWTECLIQVV 465


>gi|110227619 MYC induced nuclear antigen isoform a [Homo sapiens]
          Length = 465

 Score =  940 bits (2429), Expect = 0.0
 Identities = 464/465 (99%), Positives = 464/465 (99%), Gaps = 1/465 (0%)

Query: 1   MPKKAKPTGSGKEEGPAPCKQMKLEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWE 60
           MPKKAKPTGSGKEEGPAPCKQMKLEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWE
Sbjct: 1   MPKKAKPTGSGKEEGPAPCKQMKLEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWE 60

Query: 61  QKPLLIQRDDPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAH 120
           QKPLLIQRDDPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAH
Sbjct: 61  QKPLLIQRDDPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVCRCVNGKKKVLNKDGKAH 120

Query: 121 FLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHY 180
           FLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHY
Sbjct: 121 FLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHY 180

Query: 181 DDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIH 240
           DDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIH
Sbjct: 181 DDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIH 240

Query: 241 QADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAKEDVELRTGIPRQLLL-VES 299
           QADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAKEDVELRTGIPRQLLL VES
Sbjct: 241 QADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAKEDVELRTGIPRQLLLQVES 300

Query: 300 TTVATRRLSGFLRTLADRLEGTKELLSSDMKKDFIMHRLPPYSAGDGAELSTPGGKLPRL 359
           TTVATRRLSGFLRTLADRLEGTKELLSSDMKKDFIMHRLPPYSAGDGAELSTPGGKLPRL
Sbjct: 301 TTVATRRLSGFLRTLADRLEGTKELLSSDMKKDFIMHRLPPYSAGDGAELSTPGGKLPRL 360

Query: 360 DSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLKNSRETHMMGNEEETEFHGLRFP 419
           DSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLKNSRETHMMGNEEETEFHGLRFP
Sbjct: 361 DSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLKNSRETHMMGNEEETEFHGLRFP 420

Query: 420 LSHLDALKQIWNSPAISVKDLKLTTDEEKESLVLSLWTECLIQVV 464
           LSHLDALKQIWNSPAISVKDLKLTTDEEKESLVLSLWTECLIQVV
Sbjct: 421 LSHLDALKQIWNSPAISVKDLKLTTDEEKESLVLSLWTECLIQVV 465


>gi|106879206 chromosome 14 open reading frame 169 [Homo sapiens]
          Length = 641

 Score =  215 bits (547), Expect = 8e-56
 Identities = 158/471 (33%), Positives = 246/471 (52%), Gaps = 35/471 (7%)

Query: 11  GKEEGPAPCKQMKLEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQKPLLIQRDD 70
           G+    +P +++  E    PS+      + LFE LI+P+  + F++  WE++ +L++R D
Sbjct: 177 GEPAWDSPLRRVLAELNRIPSSRR--RAARLFEWLIAPMPPDHFYRRLWEREAVLVRRQD 234

Query: 71  PALATYYGSLFKLTDLKSLC-SRGMYYGRDVNVCRCVNGKKKVLNKDGKAHFLQLRKDFD 129
               TYY  LF   DL S+  +  + +G+ ++  R +NG+++ LN  G+A          
Sbjct: 235 H---TYYQGLFSTADLDSMLRNEEVQFGQHLDAARYINGRRETLNPPGRA-LPAAAWSLY 290

Query: 130 QKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYDDVEVFILQ 189
           Q   +++   PQ F   +W+    L+  FGS+ GSNVY+TP  SQG  PHYDD+E F+LQ
Sbjct: 291 QAGCSLRLLCPQAFSTTVWQFLAVLQEQFGSMAGSNVYLTPPNSQGFAPHYDDIEAFVLQ 350

Query: 190 LEGEKHWRLYHPTVP---LAREYSVE-AEERIGRPVHEFMLKPGDLLYFPRGTIHQADTP 245
           LEG K WR+Y P VP   LA   S   +++ +G PV + +L+PGDLLYFPRG IHQA+  
Sbjct: 351 LEGRKLWRVYRPRVPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQ 410

Query: 246 AGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAKEDVELRTGIPRQLL----LVESTT 301
            G+ HS H+T+STYQ N+WGDFL   +   V    +E+VE R G+PR  +       S +
Sbjct: 411 DGV-HSLHLTLSTYQRNTWGDFLEAILPLAVQAAMEENVEFRRGLPRDFMDYMGAQHSDS 469

Query: 302 VATRRLSGF--LRTLADRLE--GTKELLSSDMKKDFIMHRLPPYSAGDGAELSTPGGKLP 357
              RR +    +R L  RL      + ++    KDFI   LPP        LS  G  LP
Sbjct: 470 KDPRRTAFMEKVRVLVARLGHFAPVDAVADQRAKDFIHDSLPPVLTDRERALSVYG--LP 527

Query: 358 -RLDS----VVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLKNSRETHMMGNEEETE 412
            R ++     V  Q      + +L D       +   +++Y++++NSR  H+    EE +
Sbjct: 528 IRWEAGEPVNVGAQLTTETEVHMLQDGIARLVGEGGHLFLYYTVENSRVYHL----EEPK 583

Query: 413 FHGLRFPLSHLDALKQIWNS--PAISVKDLKLTTDEEKESLVLSLWTECLI 461
              L       DA++ +  S    + V DL   + E++ SL  +L+ + L+
Sbjct: 584 C--LEIYPQQADAMELLLGSYPEFVRVGDLPCDSVEDQLSLATTLYDKGLL 632


>gi|5454096 serine/threonine kinase 4 [Homo sapiens]
          Length = 487

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 46  ISPIKTETFFKEFWEQKPLLIQRDDPALATYYGSLFKLTDLKSLCSRGMYYGRDVNVCRC 105
           I  +  E+  +E  ++  ++ Q D P +  YYGS FK TDL  +    M Y    +V   
Sbjct: 58  IKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV----MEYCGAGSVSDI 113

Query: 106 VNGKKKVLNKDGKAHFLQ 123
           +  + K L +D  A  LQ
Sbjct: 114 IRLRNKTLTEDEIATILQ 131


>gi|103471999 serine/threonine kinase 3 [Homo sapiens]
          Length = 491

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 46 ISPIKTETFFKEFWEQKPLLIQRDDPALATYYGSLFKLTDL 86
          I  +  E+  +E  ++  ++ Q D P +  YYGS FK TDL
Sbjct: 55 IKQVPVESDLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDL 95


>gi|90903245 CD200 antigen isoform b [Homo sapiens]
          Length = 294

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 404 MMGNEEETEFHGLRFPLSHLDALKQIWNSPAI--SVKDLKLTTDEEKESLVLSLWTECLI 461
           ++G     ++  +R P SHL     +W   A+      +++ T +E+E L      +C +
Sbjct: 19  LLGKTTINDYQVIRMPFSHLSTYSLVWVMAAVVLCTAQVQVVTQDEREQLYTPASLKCSL 78

Query: 462 Q 462
           Q
Sbjct: 79  Q 79


>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
          Length = 7081

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 14/100 (14%)

Query: 317 RLEGTKELLSSDMKKDFIMHRLPPYSA--GDGAELSTPGGKLPRLDSVVRLQFKDHIVLT 374
           + +G ++++SS++ +D +   +P  S   G      TP  K     +V  L+ K      
Sbjct: 444 KAQGQQQIVSSELNQDSVYSSVPLLSTIKGQKNRRKTPDSKSKLSLNVPSLKAK------ 497

Query: 375 VLPDQDQSDEAQEKMVYIYHSLKNSRETHMMGNEEETEFH 414
                 ++  +Q   + + H+LKN  E     N E+ E H
Sbjct: 498 ------KTPTSQVFQITVCHTLKNRNELGCKNNTEKKELH 531


>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo
           sapiens]
          Length = 6929

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 14/100 (14%)

Query: 317 RLEGTKELLSSDMKKDFIMHRLPPYSA--GDGAELSTPGGKLPRLDSVVRLQFKDHIVLT 374
           + +G ++++SS++ +D +   +P  S   G      TP  K     +V  L+ K      
Sbjct: 373 KAQGQQQIVSSELNQDSVYSSVPLLSTIKGQKNRRKTPDSKSKLSLNVPSLKAK------ 426

Query: 375 VLPDQDQSDEAQEKMVYIYHSLKNSRETHMMGNEEETEFH 414
                 ++  +Q   + + H+LKN  E     N E+ E H
Sbjct: 427 ------KTPTSQVFQITVCHTLKNRNELGCKNNTEKKELH 460


>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo
           sapiens]
          Length = 6929

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 14/100 (14%)

Query: 317 RLEGTKELLSSDMKKDFIMHRLPPYSA--GDGAELSTPGGKLPRLDSVVRLQFKDHIVLT 374
           + +G ++++SS++ +D +   +P  S   G      TP  K     +V  L+ K      
Sbjct: 373 KAQGQQQIVSSELNQDSVYSSVPLLSTIKGQKNRRKTPDSKSKLSLNVPSLKAK------ 426

Query: 375 VLPDQDQSDEAQEKMVYIYHSLKNSRETHMMGNEEETEFH 414
                 ++  +Q   + + H+LKN  E     N E+ E H
Sbjct: 427 ------KTPTSQVFQITVCHTLKNRNELGCKNNTEKKELH 460


>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo
           sapiens]
          Length = 6929

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 14/100 (14%)

Query: 317 RLEGTKELLSSDMKKDFIMHRLPPYSA--GDGAELSTPGGKLPRLDSVVRLQFKDHIVLT 374
           + +G ++++SS++ +D +   +P  S   G      TP  K     +V  L+ K      
Sbjct: 373 KAQGQQQIVSSELNQDSVYSSVPLLSTIKGQKNRRKTPDSKSKLSLNVPSLKAK------ 426

Query: 375 VLPDQDQSDEAQEKMVYIYHSLKNSRETHMMGNEEETEFH 414
                 ++  +Q   + + H+LKN  E     N E+ E H
Sbjct: 427 ------KTPTSQVFQITVCHTLKNRNELGCKNNTEKKELH 460


>gi|41393554 LUC7-like isoform b [Homo sapiens]
          Length = 371

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)

Query: 117 GKAH--FLQLRKDFDQKRATIQFHQPQRFKDELWRIQEK 153
           GK H  F+Q+R+  DQ R T+   Q +R +D L R +E+
Sbjct: 212 GKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREER 250


>gi|8922297 LUC7-like isoform a [Homo sapiens]
          Length = 325

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)

Query: 117 GKAH--FLQLRKDFDQKRATIQFHQPQRFKDELWRIQEK 153
           GK H  F+Q+R+  DQ R T+   Q +R +D L R +E+
Sbjct: 212 GKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREER 250


>gi|27735115 hypothetical protein LOC285051 [Homo sapiens]
          Length = 177

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)

Query: 3  KKAKPTGSGKEEGPAPCKQMKLEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQK 62
          K A+ T S + EG       ++     P    +   + + ESL++P+     FK    +K
Sbjct: 28 KPAQKTSSFEREG-----WWRIALTDTPIPGTYHLKTFIEESLLNPVIATYNFKNEGRKK 82

Query: 63 PLLIQRDDPAL 73
          P L+QR++P L
Sbjct: 83 PPLVQRNNPVL 93


>gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens]
          Length = 454

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 19/89 (21%)

Query: 165 NVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLY----------HPTVPLAREYSVEAE 214
           N +  P G+   P H D  + F++Q+ G K+ RLY          H T  L     V+ E
Sbjct: 346 NAWFGPQGTIS-PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVE 404

Query: 215 ----ERIGR----PVHEFMLKPGDLLYFP 235
               E+  +    P    +L PG++L+ P
Sbjct: 405 NPDLEKFPKFAKAPFLSCILSPGEILFIP 433


>gi|189011544 ubiquitously transcribed tetratricopeptide repeat, X
            chromosome [Homo sapiens]
          Length = 1401

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query: 220  PVHEFMLKPGDLLYFPRGTIH 240
            PV+ F+ +PGDL++   GT+H
Sbjct: 1206 PVYRFIQRPGDLVWINAGTVH 1226


>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
          Length = 1682

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query: 220  PVHEFMLKPGDLLYFPRGTIH 240
            PV+ F+ +PGDL++   GT+H
Sbjct: 1450 PVYRFVQRPGDLVWINAGTVH 1470


>gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens]
          Length = 416

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 19/89 (21%)

Query: 165 NVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLY----------HPTVPLAREYSVEAE 214
           N +  P G+   P H D  + F++Q+ G K+ RLY          H T  L     V+ E
Sbjct: 308 NAWFGPQGTIS-PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVE 366

Query: 215 ----ERIGR----PVHEFMLKPGDLLYFP 235
               E+  +    P    +L PG++L+ P
Sbjct: 367 NPDLEKFPKFAKAPFLSCILSPGEILFIP 395


>gi|194239638 zinc finger protein 449 [Homo sapiens]
          Length = 518

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 40/190 (21%), Positives = 74/190 (38%), Gaps = 20/190 (10%)

Query: 282 EDVELRTGIPRQ------LLLVESTTVATRRLSGFLRTLADRLEGTKELLSSDMKKDFIM 335
           ED++    IP Q      +LL E   V T  +   +   +  L+       + + + +I 
Sbjct: 106 EDLQRELEIPEQQVDMHDMLLEELAPVGTAHIPPTMHLESPALQVMGPAQEAPVAEAWIP 165

Query: 336 HRLPP---YSA-GDGAELSTPGGKLPRLDSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVY 391
              PP   Y A G+      PG  LP+LD    L+ ++   +  L D  +  +  +  + 
Sbjct: 166 QAGPPELNYGATGECQNFLDPGYPLPKLDMNFSLENREEPWVKELQDSKEMKQLLDSKIG 225

Query: 392 IYHSLKNSRETHMMGNEE-------ETEFHGLRFPLSHLD--ALKQIWNSPAISVK-DLK 441
               ++N  +T      E         E + L+ P+   D   L+  W +P   ++ DL 
Sbjct: 226 FEIGIENEEDTSKQKKMETMYPFIVTLEGNALQGPILQKDYVQLENQWETPPEDLQTDLA 285

Query: 442 LTTDEEKESL 451
              D++  +L
Sbjct: 286 KLVDQQNPTL 295


>gi|33188431 tetratricopeptide repeat protein isoform 3 [Homo sapiens]
          Length = 1347

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query: 220  PVHEFMLKPGDLLYFPRGTIH 240
            PV+ F+ +PGDL++   GT+H
Sbjct: 1153 PVYRFIQRPGDLVWINAGTVH 1173


>gi|33188427 tetratricopeptide repeat protein isoform 2 [Homo sapiens]
          Length = 1240

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query: 220  PVHEFMLKPGDLLYFPRGTIH 240
            PV+ F+ +PGDL++   GT+H
Sbjct: 1153 PVYRFIQRPGDLVWINAGTVH 1173


>gi|154759242 olfactory receptor, family 2, subfamily A, member 2
           [Homo sapiens]
          Length = 318

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)

Query: 362 VVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLKN 398
           VV L F   +V+ ++PD +Q +E QEKM+ ++HS+ N
Sbjct: 246 VVGLFFGIAMVVYMVPDSNQREE-QEKMLSLFHSVFN 281


>gi|223890252 glutamate receptor interacting protein 1 [Homo
           sapiens]
          Length = 1076

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 324 LLSSDMKKDFIMHRLPPYSAGDGAELSTPGGKLPR--LDSVVRL--QFKDHIVLTVLPDQ 379
           L+ SD+KK  + HR      GD   L+    +L    ++  V++  Q +D + L +  D+
Sbjct: 548 LVISDIKKGSVAHRTGTLELGDKL-LAIDNIRLDNCSMEDAVQILQQCEDLVKLKIRKDE 606

Query: 380 DQSDEAQEKMVYIY 393
           D SDE +     IY
Sbjct: 607 DNSDEQESSGAIIY 620


>gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor
           [Homo sapiens]
          Length = 349

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 19/100 (19%)

Query: 164 SNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTV-----------PLAREYSVE 212
           SN+ +        P HYD+ + F  Q++G K   L+ P             P  R+  V+
Sbjct: 184 SNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVD 243

Query: 213 AE----ERIGR----PVHEFMLKPGDLLYFPRGTIHQADT 244
            +    ER         +E ++ PGD+LY P    H  ++
Sbjct: 244 FDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIES 283


>gi|38348324 progestin and adipoQ receptor family member IX [Homo
          sapiens]
          Length = 377

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 1  MPKKAKPTGSGKEEGPAPCKQMKLEAAGGPSALNFDSPSS 40
          MP++ +P G+G +  PAP       A    SA + D P+S
Sbjct: 1  MPRRLQPRGAGTKGPPAPAPAASGAARNSHSAASRDPPAS 40


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,410,631
Number of Sequences: 37866
Number of extensions: 922964
Number of successful extensions: 2109
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2083
Number of HSP's gapped (non-prelim): 32
length of query: 464
length of database: 18,247,518
effective HSP length: 106
effective length of query: 358
effective length of database: 14,233,722
effective search space: 5095672476
effective search space used: 5095672476
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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