Guide to the Human Genome
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Name: C2orf61 Sequence: fasta or formatted (177aa) NCBI GI: 27735115
Description:

hypothetical protein LOC285051

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         10           1
 C cysteine            0.6          1           1
 D aspartate           5.1          9           1
 E glutamate           4.0          7           2
 F phenylalanine       5.1          9           1
 G glycine             3.4          6           2
 H histidine           0.6          1           1
 I isoleucine          4.5          8           1
 K lysine              6.8         12           2
 L leucine             8.5         15           2
 M methionine          1.7          3           1
 N asparagine          4.0          7           2
 P proline            11.3         20           2
 Q glutamine           5.1          9           1
 R arginine            5.1          9           1
 S serine              9.0         16           2
 T threonine           7.9         14           2
 V valine              6.8         12           1
 W tryptophan          1.1          2           2
 Y tyrosine            4.0          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC285051 
EIF2AK4               0.021   eukaryotic translation initiation factor 2 alpha kin...
GTSE1                 0.015   G-2 and S-phase expressed 1 
MINA                  0.015   MYC induced nuclear antigen isoform b 
MINA                  0.015   MYC induced nuclear antigen isoform a 
MINA                  0.015   MYC induced nuclear antigen isoform a 
TRHDE                 0.015   thyrotropin-releasing hormone degrading enzyme 
MPPED1                0.015   metallophosphoesterase domain containing 1 
SLC27A3               0.015   solute carrier family 27 member 3 
CENPE                 0.012   centromere protein E 
CENPF                 0.012   centromere protein F 
COL29A1               0.009   collagen, type XXIX, alpha 1 
REG4                  0.009   regenerating islet-derived family, member 4 isoform...
AIM1                  0.009   absent in melanoma 1 
SYTL2                 0.006   synaptotagmin-like 2 isoform i 
ASPM                  0.006   asp (abnormal spindle)-like, microcephaly associate...
SCD                   0.006   stearoyl-CoA desaturase 1 
SLITRK2               0.006   SLIT and NTRK-like family, member 2 
SLITRK2               0.006   SLIT and NTRK-like family, member 2 
SLITRK2               0.006   SLIT and NTRK-like family, member 2 
SLITRK2               0.006   SLIT and NTRK-like family, member 2 
SLITRK2               0.006   SLIT and NTRK-like family, member 2 
SLITRK2               0.006   SLIT and NTRK-like family, member 2 
SLITRK2               0.006   SLIT and NTRK-like family, member 2 
SLITRK2               0.006   SLIT and NTRK-like family, member 2 
SLITRK2               0.006   SLIT and NTRK-like family, member 2 
LOC100128398          0.006   PREDICTED: hypothetical protein 
LOC100128398          0.006   PREDICTED: hypothetical protein 
LOC100128398          0.006   PREDICTED: hypothetical protein 
ANKMY1                0.006   ankyrin repeat and MYND domain containing 1 isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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