CCDC140 15869

Name: CCDC140	Sequence: fasta or formatted (163aa)		NCBI GI: 23308537
Description: coiled-coil domain containing 140		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 14 2 C cysteine 1.8 3 1 D aspartate 3.1 5 1 E glutamate 8.6 14 2 F phenylalanine 1.8 3 1 G glycine 6.7 11 1 H histidine 1.8 3 1 I isoleucine 1.2 2 1 K lysine 9.2 15 4 L leucine 6.1 10 2 M methionine 1.2 2 1 N asparagine 4.3 7 1 P proline 8.6 14 2 Q glutamine 4.9 8 1 R arginine 12.9 21 2 S serine 10.4 17 2 T threonine 5.5 9 1 V valine 1.8 3 1 W tryptophan 1.2 2 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 140 CBX8 0.049 chromobox homolog 8 PPRC1 0.045 peroxisome proliferator-activated receptor gamma, co... RBBP6 0.039 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.039 retinoblastoma-binding protein 6 isoform 1 FAM126B 0.039 hypothetical protein LOC285172 LOC100286959 0.039 PREDICTED: hypothetical protein XP_002343921 LOC100293644 0.036 PREDICTED: hypothetical protein LOC100287563 0.036 PREDICTED: hypothetical protein LOC100287563 0.036 PREDICTED: hypothetical protein XP_002343733 LOC100294073 0.036 PREDICTED: hypothetical protein, partial NPAS2 0.032 neuronal PAS domain protein 2 ARL6IP4 0.032 SRp25 nuclear protein isoform 3 LOC100133599 0.032 PREDICTED: hypothetical protein NEFH 0.032 neurofilament, heavy polypeptide 200kDa LOC100133698 0.029 PREDICTED: hypothetical protein PRPF40A 0.029 formin binding protein 3 LOC100133599 0.026 PREDICTED: hypothetical protein RSRC2 0.026 arginine/serine-rich coiled-coil 2 isoform a C1orf35 0.026 hypothetical protein LOC79169 SCYL1 0.026 SCY1-like 1 isoform B SCYL1 0.026 SCY1-like 1 isoform A PNN 0.026 pinin, desmosome associated protein CLASP1 0.026 CLIP-associating protein 1 isoform 1 CENPF 0.026 centromere protein F ARL6IP4 0.026 SRp25 nuclear protein isoform 4 ARL6IP4 0.026 SRp25 nuclear protein isoform 2 SRRM2 0.026 splicing coactivator subunit SRm300 LOC100131202 0.023 PREDICTED: hypothetical protein LOC100294364 0.023 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.