Search of human proteins with 23238228

Search of human proteins with 23238228

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23238228 chondroitin 6-sulfotransferase 7 [Homo sapiens]
         (486 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23238228 chondroitin 6-sulfotransferase 7 [Homo sapiens]           979   0.0  
gi|27369497 carbohydrate (N-acetylglucosamine-6-O) sulfotransfer...   348   6e-96
gi|11055976 carbohydrate (N-acetylglucosamine 6-O) sulfotransfer...   228   1e-59
gi|5031735 carbohydrate (N-acetylglucosamine 6-O) sulfotransfera...   227   2e-59
gi|21362052 carbohydrate (N-acetylglucosamine 6-O) sulfotransfer...   225   6e-59
gi|4502841 carbohydrate (keratan sulfate Gal-6) sulfotransferase...   178   9e-45
gi|19923281 chondroitin 6-sulfotransferase 3 [Homo sapiens]           162   6e-40
gi|23943787 dermatan sulfate epimerase-like [Homo sapiens]             36   0.090
gi|5174467 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3...    34   0.26 
gi|5174465 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3...    34   0.26 
gi|48762934 alpha 2 type I collagen [Homo sapiens]                     34   0.34 
gi|31543559 radial spoke 3 homolog [Homo sapiens]                      32   1.7  
gi|183583553 collagen, type XXIX, alpha 1 [Homo sapiens]               31   2.2  
gi|226437602 NK1 homeobox 2 [Homo sapiens]                             31   2.9  
gi|119508426 alpha 3 type IX collagen [Homo sapiens]                   31   2.9  
gi|116089312 heparan sulfate (glucosamine) 3-O-sulfotransferase ...    31   2.9  
gi|50843837 hypothetical protein LOC55701 [Homo sapiens]               30   4.9  
gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]                  30   6.4  
gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]                  30   6.4  
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]            30   6.4  
gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]                  30   6.4  
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]            30   6.4  
gi|37537554 hypothetical protein FLJ37538 [Homo sapiens]               30   6.4  
gi|8393264 delta-like 3 protein isoform 1 precursor [Homo sapiens]     29   8.4  
gi|45243561 delta-like 3 protein isoform 2 precursor [Homo sapiens]    29   8.4  
gi|153791244 hypothetical protein LOC55237 [Homo sapiens]              29   8.4  
gi|154937330 sodium-dependent glucose transporter 1 [Homo sapiens]     29   8.4  

>gi|23238228 chondroitin 6-sulfotransferase 7 [Homo sapiens]
          Length = 486

 Score =  979 bits (2530), Expect = 0.0
 Identities = 486/486 (100%), Positives = 486/486 (100%)

Query: 1   MKGRRRRRREYCKFALLLVLYTLVLLLVPSVLDGGRDGDKGAEHCPGLQRSLGVWSLEAA 60
           MKGRRRRRREYCKFALLLVLYTLVLLLVPSVLDGGRDGDKGAEHCPGLQRSLGVWSLEAA
Sbjct: 1   MKGRRRRRREYCKFALLLVLYTLVLLLVPSVLDGGRDGDKGAEHCPGLQRSLGVWSLEAA 60

Query: 61  AAGEREQGAEARAAEEGGANQSPRFPSNLSGAVGEAVSREKQHIYVHATWRTGSSFLGEL 120
           AAGEREQGAEARAAEEGGANQSPRFPSNLSGAVGEAVSREKQHIYVHATWRTGSSFLGEL
Sbjct: 61  AAGEREQGAEARAAEEGGANQSPRFPSNLSGAVGEAVSREKQHIYVHATWRTGSSFLGEL 120

Query: 121 FNQHPDVFYLYEPMWHLWQALYPGDAESLQGALRDMLRSLFRCDFSVLRLYAPPGDPAAR 180
           FNQHPDVFYLYEPMWHLWQALYPGDAESLQGALRDMLRSLFRCDFSVLRLYAPPGDPAAR
Sbjct: 121 FNQHPDVFYLYEPMWHLWQALYPGDAESLQGALRDMLRSLFRCDFSVLRLYAPPGDPAAR 180

Query: 181 APDTANLTTAALFRWRTNKVICSPPLCPGAPRARAEVGLVEDTACERSCPPVAIRALEAE 240
           APDTANLTTAALFRWRTNKVICSPPLCPGAPRARAEVGLVEDTACERSCPPVAIRALEAE
Sbjct: 181 APDTANLTTAALFRWRTNKVICSPPLCPGAPRARAEVGLVEDTACERSCPPVAIRALEAE 240

Query: 241 CRKYPVVVIKDVRLLDLGVLVPLLRDPGLNLKVVQLFRDPRAVHNSRLKSRQGLLRESIQ 300
           CRKYPVVVIKDVRLLDLGVLVPLLRDPGLNLKVVQLFRDPRAVHNSRLKSRQGLLRESIQ
Sbjct: 241 CRKYPVVVIKDVRLLDLGVLVPLLRDPGLNLKVVQLFRDPRAVHNSRLKSRQGLLRESIQ 300

Query: 301 VLRTRQRGDRFHRVLLAHGVGARPGGQSRALPAAPRADFFLTGALEVICEAWLRDLLFAR 360
           VLRTRQRGDRFHRVLLAHGVGARPGGQSRALPAAPRADFFLTGALEVICEAWLRDLLFAR
Sbjct: 301 VLRTRQRGDRFHRVLLAHGVGARPGGQSRALPAAPRADFFLTGALEVICEAWLRDLLFAR 360

Query: 361 GAPAWLRRRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAALDAFALNMTRGAAYGADRPF 420
           GAPAWLRRRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAALDAFALNMTRGAAYGADRPF
Sbjct: 361 GAPAWLRRRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAALDAFALNMTRGAAYGADRPF 420

Query: 421 HLSARDAREAVHAWRERLSREQVRQVEAACAPAMRLLAYPRSGEEGDAEQPREGETPLEM 480
           HLSARDAREAVHAWRERLSREQVRQVEAACAPAMRLLAYPRSGEEGDAEQPREGETPLEM
Sbjct: 421 HLSARDAREAVHAWRERLSREQVRQVEAACAPAMRLLAYPRSGEEGDAEQPREGETPLEM 480

Query: 481 DADGAT 486
           DADGAT
Sbjct: 481 DADGAT 486


>gi|27369497 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase
           2 [Homo sapiens]
          Length = 530

 Score =  348 bits (893), Expect = 6e-96
 Identities = 193/403 (47%), Positives = 253/403 (62%), Gaps = 22/403 (5%)

Query: 59  AAAAGEREQGAEARAAEEGGANQSPRFPSNLSGAVGEAVSREKQHIYVHATWRTGSSFLG 118
           AAA G     A A AA   G    P   +  +G VG+    ++Q +YV  TWR+GSSF G
Sbjct: 130 AAAVG----AAPAAAAGMAGVAAPPGNGTRGTGGVGD----KRQLVYVFTTWRSGSSFFG 181

Query: 119 ELFNQHPDVFYLYEPMWHLWQALYPGDAESLQGALRDMLRSLFRCDFSVLRLYAPPGDPA 178
           ELFNQ+P+VF+LYEP+WH+WQ LYPGDA SLQGA RDML +L+RCD SV +LY+P G   
Sbjct: 182 ELFNQNPEVFFLYEPVWHVWQKLYPGDAVSLQGAARDMLSALYRCDLSVFQLYSPAGSGG 241

Query: 179 ARAPDTANLTTAALFRWRTNKVICSPPLCPGAPRARAEVGLVEDTACERSCPPVAIRALE 238
                  NLTT  +F   TNKV+CS PLCP     +  VGLV+D  C++ CPP  +   E
Sbjct: 242 ------RNLTTLGIFGAATNKVVCSSPLCPA--YRKEVVGLVDDRVCKK-CPPQRLARFE 292

Query: 239 AECRKYPVVVIKDVRLLDLGVLVPLLRDPGLNLKVVQLFRDPRAVHNSRLKSRQGLLRES 298
            ECRKY  +VIK VR+ D+ VL PLLRDP L+LKV+ L RDPRAV +SR++SR GL+RES
Sbjct: 293 EECRKYRTLVIKGVRVFDVAVLAPLLRDPALDLKVIHLVRDPRAVASSRIRSRHGLIRES 352

Query: 299 IQVLRTRQRGDRFHRVLLAHGVGARPGGQSRALPAAPRADFFLTGALEVICEAWLRDLLF 358
           +QV+R+R    R HR+      G + G +   +     AD+   GA+EVIC +  + L  
Sbjct: 353 LQVVRSRD--PRAHRMPFLEAAGHKLGAKKEGVGGP--ADYHALGAMEVICNSMAKTLQT 408

Query: 359 ARGAPAWLRRRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAALDAFALNMTRGAAYGADR 418
           A   P WL+  YL +RYEDLV  P   LRR+  F GL     ++ FALNMT G+   + +
Sbjct: 409 ALQPPDWLQGHYLVVRYEDLVGDPVKTLRRVYDFVGLLVSPEMEQFALNMTSGSG-SSSK 467

Query: 419 PFHLSARDAREAVHAWRERLSREQVRQVEAACAPAMRLLAYPR 461
           PF +SAR+A +A +AWR  L+ +Q++QVE  C   M +L Y R
Sbjct: 468 PFVVSARNATQAANAWRTALTFQQIKQVEEFCYQPMAVLGYER 510


>gi|11055976 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase
           6 [Homo sapiens]
          Length = 395

 Score =  228 bits (580), Expect = 1e-59
 Identities = 142/379 (37%), Positives = 195/379 (51%), Gaps = 54/379 (14%)

Query: 86  PSNLSGAVGEAVSREKQHIYVHATWRTGSSFLGELFNQHPDVFYLYEPMWHLWQALYPGD 145
           P   S A GEA    + H+ V ++WR+GSSF+G+LFNQHPDVFYL EP WH+W  L  G 
Sbjct: 29  PGPSSPAGGEA----RVHVLVLSSWRSGSSFVGQLFNQHPDVFYLMEPAWHVWTTLSQGS 84

Query: 146 AESLQGALRDMLRSLFRCDFSVLRLYAPPGDPAARAPDTANLTTAALFRWRTNKVICSPP 205
           A +L  A+RD++RS+F CD  V   Y P                + LF+W  ++ +CSPP
Sbjct: 85  AATLHMAVRDLVRSVFLCDMDVFDAYLP-----------WRRNLSDLFQWAVSRALCSPP 133

Query: 206 LCPGAPRARAEVGLVEDTACERSCPPVAIRALEAECRKYPVVVIKDVRLLDLGVLVPLLR 265
            C   PR      +  +  C+  C   +       CR Y  VV+K+VR  +L VL PLL 
Sbjct: 134 ACSAFPRG----AISSEAVCKPLCARQSFTLAREACRSYSHVVLKEVRFFNLQVLYPLLS 189

Query: 266 DPGLNLKVVQLFRDPRAVHNSRLKSRQGLLRESIQVLRTRQRGDRFHRVLLAHGVGARPG 325
           DP LNL++V L RDPRAV  SR ++ + L R++  VL T               V A PG
Sbjct: 190 DPALNLRIVHLVRDPRAVLRSREQTAKALARDNGIVLGTN-----------GTWVEADPG 238

Query: 326 GQSRALPAAPRADFFLTGALEVICEAWLRDLLFARGA----PAWLRRRYLRLRYEDLVRQ 381
                              L V+ E     +  A  A    P +LR RY  +R+EDL R+
Sbjct: 239 -------------------LRVVREVCRSHVRIAEAATLKPPPFLRGRYRLVRFEDLARE 279

Query: 382 PRAQLRRLLRFSGLRALAALDAFALNMTRGAAYGADR-PFHLSARDAREAVHAWRERLSR 440
           P A++R L  F+GL     L+A+  N+T G+  GA R  F  S+R+A     AWR  L  
Sbjct: 280 PLAEIRALYAFTGLSLTPQLEAWIHNITHGSGPGARREAFKTSSRNALNVSQAWRHALPF 339

Query: 441 EQVRQVEAACAPAMRLLAY 459
            ++R+V+  CA A++LL Y
Sbjct: 340 AKIRRVQELCAGALQLLGY 358


>gi|5031735 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase
           4 [Homo sapiens]
          Length = 386

 Score =  227 bits (578), Expect = 2e-59
 Identities = 132/360 (36%), Positives = 184/360 (51%), Gaps = 41/360 (11%)

Query: 100 EKQHIYVHATWRTGSSFLGELFNQHPDVFYLYEPMWHLWQALYPGDAESLQGALRDMLRS 159
           E+ H+ V ++WR+GSSF+G+LF QHPDVFYL EP WH+W       A  L  A+RD++R+
Sbjct: 41  ERMHVLVLSSWRSGSSFVGQLFGQHPDVFYLMEPAWHVWMTFKQSTAWMLHMAVRDLIRA 100

Query: 160 LFRCDFSVLRLYAPPGDPAARAPDTANLTTAALFRWRTNKVICSPPLCPGAPRARAEVGL 219
           +F CD SV   Y  PG              ++LF+W  ++ +CS P C   P+      +
Sbjct: 101 VFLCDMSVFDAYMEPGPRRQ----------SSLFQWENSRALCSAPACDIIPQDE----I 146

Query: 220 VEDTACERSCPPVAIRALEAECRKYPVVVIKDVRLLDLGVLVPLLRDPGLNLKVVQLFRD 279
           +    C   C       +E  CR Y  VV+K+VR  +L  L PLL+DP LNL +V L RD
Sbjct: 147 IPRAHCRLLCSQQPFEVVEKACRSYSHVVLKEVRFFNLQSLYPLLKDPSLNLHIVHLVRD 206

Query: 280 PRAVHNSRLKSRQGLLRESIQVLRTRQRGDRFHRVLLAHGVGARPGGQSRALPAAPRADF 339
           PRAV  SR +++  L+ +S  V+                       GQ           +
Sbjct: 207 PRAVFRSRERTKGDLMIDSRIVM-----------------------GQHEQKLKKEDQPY 243

Query: 340 FLTGALEVICEAWLRDLLFARGAPAWLRRRYLRLRYEDLVRQPRAQLRRLLRFSGLRALA 399
           ++   ++VIC++ L      +  P  L+ RYL +RYEDL R P AQ  R+  F GL  L 
Sbjct: 244 YV---MQVICQSQLEIYKTIQSLPKALQERYLLVRYEDLARAPVAQTSRMYEFVGLEFLP 300

Query: 400 ALDAFALNMTRGAAYGADRPFHLSARDAREAVHAWRERLSREQVRQVEAACAPAMRLLAY 459
            L  +  N+TRG   G D  FH +ARDA     AWR  L  E+V +++ AC  AM LL Y
Sbjct: 301 HLQTWVHNITRGKGMG-DHAFHTNARDALNVSQAWRWSLPYEKVSRLQKACGDAMNLLGY 359


>gi|21362052 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase
           5 [Homo sapiens]
          Length = 411

 Score =  225 bits (574), Expect = 6e-59
 Identities = 142/374 (37%), Positives = 193/374 (51%), Gaps = 50/374 (13%)

Query: 91  GAVGEAVSREKQHIYVHATWRTGSSFLGELFNQHPDVFYLYEPMWHLWQALYPGDAESLQ 150
           G    A   ++ H+ V ++WR+GSSFLG+LF+QHPDVFYL EP WH+W  L  G A +L 
Sbjct: 52  GPSSPAGGEDRVHVLVLSSWRSGSSFLGQLFSQHPDVFYLMEPAWHVWTTLSQGSAATLH 111

Query: 151 GALRDMLRSLFRCDFSVLRLYAPPGDPAARAPDTANLTTAALFRWRTNKVICSPPLCPGA 210
            A+RD++RS+F CD  V   Y P          + NL+  A F W T++ +CSPP C   
Sbjct: 112 MAVRDLMRSIFLCDMDVFDAYMP---------QSRNLS--AFFNWATSRALCSPPACSAF 160

Query: 211 PRARAEVGLVEDTACERSCPPVAIRALEAECRKYPVVVIKDVRLLDLGVLVPLLRDPGLN 270
           PR       V  T C R    +A  A    CR Y  VV+K+VR  +L VL PLL DP LN
Sbjct: 161 PRGTISKQDVCKTLCTRQPFSLAREA----CRSYSHVVLKEVRFFNLQVLYPLLSDPALN 216

Query: 271 LKVVQLFRDPRAVHNSRLKSRQGLLRESIQVLRTRQRGDRFHRVLLAHGVGARPGGQSRA 330
           L++V L RDPRAV  SR  +   L R++  VL                      G   + 
Sbjct: 217 LRIVHLVRDPRAVLRSREAAGPILARDNGIVL----------------------GTNGKW 254

Query: 331 LPAAPRADFFLTGALEVICEAWLRDLLFARGA----PAWLRRRYLRLRYEDLVRQPRAQL 386
           + A P         L +I E     +  A  A    P +LR RY  +R+EDL R+P A++
Sbjct: 255 VEADPH--------LRLIREVCRSHVRIAEAATLKPPPFLRGRYRLVRFEDLAREPLAEI 306

Query: 387 RRLLRFSGLRALAALDAFALNMTRGAAYGAD-RPFHLSARDAREAVHAWRERLSREQVRQ 445
           R L  F+GL     L+A+  N+T G+  G     FH S+R+AR    AWR  L   ++ +
Sbjct: 307 RALYAFTGLTLTPQLEAWIHNITHGSGIGKPIEAFHTSSRNARNVSQAWRHALPFTKILR 366

Query: 446 VEAACAPAMRLLAY 459
           V+  CA A++LL Y
Sbjct: 367 VQEVCAGALQLLGY 380


>gi|4502841 carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
           [Homo sapiens]
          Length = 411

 Score =  178 bits (452), Expect = 9e-45
 Identities = 132/417 (31%), Positives = 191/417 (45%), Gaps = 63/417 (15%)

Query: 63  GEREQGAEARAAEEGGANQSPRFPSNLSGAVGEAVSREKQHIYVHATWRTGSSFLGELFN 122
           G  E G   R  EE     SP F  NLS          K HI + AT R+GSSF+G+LFN
Sbjct: 36  GLAEAGLAERLCEE-----SPTFAYNLS---------RKTHILILATTRSGSSFVGQLFN 81

Query: 123 QHPDVFYLYEPMWHLWQALY--------PGDAESLQGALRDMLRSLFRCDFSVLRLYAPP 174
           QH DVFYL+EP++H+   L         P D   + GA RD+LRSL+ CD   L  Y   
Sbjct: 82  QHLDVFYLFEPLYHVQNTLIPRFTQGKSPADRRVMLGASRDLLRSLYDCDLYFLENYI-- 139

Query: 175 GDPAARAPDTANLTTAALFRWRTNKVICSPPLCPGAPRARAEVGLVEDTACERSCPPVAI 234
                  P   N TT  +FR   ++V+CS P+C   P   A++ ++E+  C R C  + +
Sbjct: 140 ------KPPPVNHTTDRIFRRGASRVLCSRPVCD--PPGPADL-VLEEGDCVRKCGLLNL 190

Query: 235 RALEAECRKYPVVVIKDVRLLDLGVLVPLLRDPGLNLKVVQLFRDPRAVHNSRLKSRQGL 294
                 CR+   V IK VR+ ++  L  L+ DP LNLKV+QL RDPR +    L SR   
Sbjct: 191 TVAAEACRERSHVAIKTVRVPEVNDLRALVEDPRLNLKVIQLVRDPRGI----LASRSET 246

Query: 295 LRESIQVLRTRQRGDRFHRVLLAHGVGARPGGQSRALPAAPRADFFLTGALEVICEAWLR 354
            R++ ++ R            L +G G +P                    L  +CE +  
Sbjct: 247 FRDTYRLWR------------LWYGTGRKPYNLD-------------VTQLTTVCEDFSN 281

Query: 355 DLLFARGAPAWLRRRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAALDAFALNMTRGAAY 414
            +      P WL+ +Y+ +RYEDL R P  +   +  F G+   + +  +  N TRG   
Sbjct: 282 SVSTGLMRPPWLKGKYMLVRYEDLARNPMKKTEEIYGFLGIPLDSHVARWIQNNTRGDPT 341

Query: 415 GADRPFHLSARDAREAVHAWRERLSREQVRQVEAACAPAMRLLAYPRSGEEGDAEQP 471
                +  + R++      WR RLS + V   + AC   +  L Y  +  E + + P
Sbjct: 342 LGKHKYG-TVRNSAATAEKWRFRLSYDIVAFAQNACQQVLAQLGYKIAASEEELKNP 397


>gi|19923281 chondroitin 6-sulfotransferase 3 [Homo sapiens]
          Length = 479

 Score =  162 bits (410), Expect = 6e-40
 Identities = 127/405 (31%), Positives = 191/405 (47%), Gaps = 66/405 (16%)

Query: 61  AAGEREQGAEARAAEEGGANQSPRFPSNLSGAVGEAVSREKQHIYVHATWRTGSSFLGEL 120
           AAGE E+  E R  EE      PR           AV+  ++H+ + AT RTGSSF+GE 
Sbjct: 109 AAGEEEE--EQRKEEE-----PPR----------PAVAGPRRHVLLMATTRTGSSFVGEF 151

Query: 121 FNQHPDVFYLYEPMWHLWQ--ALYPGDAESLQGAL--RDMLRSLFRCDFSVLRLYAPPGD 176
           FNQ  ++FYL+EP+WH+ +  +  PG A +   AL  RD+L+ LF CD  VL  +  P  
Sbjct: 152 FNQQGNIFYLFEPLWHIERTVSFEPGGANAAGSALVYRDVLKQLFLCDLYVLEHFITP-- 209

Query: 177 PAARAPDTANLTTAALFRWRTNKVICSPPLCPGAPRARAEVGLVEDTACE-RSCPPVAIR 235
                P+  +  T  +FR  +++ +C  P+C    +      + E   C+ R C P+ + 
Sbjct: 210 ----LPE--DHLTQFMFRRGSSRSLCEDPVCTPFVKK-----VFEKYHCKNRRCGPLNVT 258

Query: 236 ALEAECRKYPVVVIKDVRLLDLGVLVPLLRDPGLNLKVVQLFRDPRAVHNSRLKSRQGLL 295
                CR+   + +K VR+  L  L PL  DP L+L+V+QL RDPRAV  SR+ +  G  
Sbjct: 259 LAAEACRRKEHMALKAVRIRQLEFLQPLAEDPRLDLRVIQLVRDPRAVLASRMVAFAGKY 318

Query: 296 RESIQVLRTR-QRGDRFHRVLLAHGVGARPGGQSRALPAAPRADFFLTGALEVICEAWLR 354
           +   + L    Q G R   V    G                             CE+   
Sbjct: 319 KTWKKWLDDEGQDGLREEEVQRLRG----------------------------NCESIRL 350

Query: 355 DLLFARGAPAWLRRRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAALDAFALNMTRGAAY 414
                   PAWLR RY+ +RYED+ R P  + R + RF+G+     ++ +    T+ A  
Sbjct: 351 SAELGLRQPAWLRGRYMLVRYEDVARGPLQKAREMYRFAGIPLTPQVEDWIQKNTQAAHD 410

Query: 415 GADRPFHLSARDAREAVHAWRERLSREQVRQVEAACAPAMRLLAY 459
           G+    + + +++ E    WR  +  +  + V+AAC PAMRL  Y
Sbjct: 411 GSG--IYSTQKNSSEQFEKWRFSMPFKLAQVVQAACGPAMRLFGY 453


>gi|23943787 dermatan sulfate epimerase-like [Homo sapiens]
          Length = 1222

 Score = 35.8 bits (81), Expect = 0.090
 Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 9/123 (7%)

Query: 342  TGALEVICEAWLRDLLFA-RGAPAWLRRRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAA 400
            + A+ ++   WL +   A R     L   Y  +++ED+V  P+    R+  F G+     
Sbjct: 1103 SNAVSLLSHLWLANTAAALRINTDLLPTSYQLVKFEDIVHFPQKTTERIFAFLGI----P 1158

Query: 401  LDAFALNMTRGAAYGADRPFHL--SARDAREAVHAWRERLSREQVRQVEAACAPAMRLLA 458
            L   +LN    A   +   F+L      +    + W++ L R++++ +E  C   M  L 
Sbjct: 1159 LSPASLNQILFAT--STNLFYLPYEGEISPTNTNVWKQNLPRDEIKLIENICWTLMDRLG 1216

Query: 459  YPR 461
            YP+
Sbjct: 1217 YPK 1219


>gi|5174467 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3B1
           [Homo sapiens]
          Length = 390

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 15/118 (12%)

Query: 357 LFARGAPAWLR----RRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAALDAFALNMTRG- 411
           ++A+    WLR    R+ L +  E L+  P  +L R+  F GL+ +     F  N T+G 
Sbjct: 275 IYAKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRVQDFLGLKRIITDKHFYFNKTKGF 334

Query: 412 ----AAYGADRPFHLSARDAREAVHAWRERLSREQVRQVEAACAPAMRLLAYPRSGEE 465
                A G+ RP  L     R         + RE VR++     P   L  Y  +G +
Sbjct: 335 PCLKKAEGSSRPHCLGKTKGRT-----HPEIDREVVRRLREFYRP-FNLKFYQMTGHD 386


>gi|5174465 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3A1
           [Homo sapiens]
          Length = 406

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 15/118 (12%)

Query: 357 LFARGAPAWLR----RRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAALDAFALNMTRG- 411
           ++A+    WLR    R+ L +  E L+  P  +L R+  F GL+ +     F  N T+G 
Sbjct: 290 IYAKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRVQDFLGLKRIITDKHFYFNKTKGF 349

Query: 412 ----AAYGADRPFHLSARDAREAVHAWRERLSREQVRQVEAACAPAMRLLAYPRSGEE 465
                A G+ RP  L     R         + RE VR++     P   L  Y  +G +
Sbjct: 350 PCLKKAEGSSRPHCLGKTKGRT-----HPEIDREVVRRLREFYRP-FNLKFYQMTGHD 401


>gi|48762934 alpha 2 type I collagen [Homo sapiens]
          Length = 1366

 Score = 33.9 bits (76), Expect = 0.34
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 5/63 (7%)

Query: 33   DGGRDGDKGAEHCPGLQRSLGVWSLEAAAAGEREQGAEARAAEEGGANQSPRFPSNLSGA 92
            D G  G+KG    PGL+   G+  L   A    +QGA       G     PR P+  SG 
Sbjct: 1007 DKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQGAPGSVGPAG-----PRGPAGPSGP 1061

Query: 93   VGE 95
             G+
Sbjct: 1062 AGK 1064


>gi|31543559 radial spoke 3 homolog [Homo sapiens]
          Length = 560

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 35 GRDGDKGAEHCPGLQRSLGVWSLEAA-AAGEREQGAEARAAEEGGANQSPRFPSNL 89
          G+ GD+     P   R+LG W+ +AA AAG    G+E   A    A   P  P  L
Sbjct: 43 GKPGDRNCPEFPPPDRTLGCWATDAAPAAGLCGAGSEPSIAPTSCAGNLPSRPPPL 98


>gi|183583553 collagen, type XXIX, alpha 1 [Homo sapiens]
          Length = 2526

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/45 (33%), Positives = 18/45 (40%)

Query: 33   DGGRDGDKGAEHCPGLQRSLGVWSLEAAAAGEREQGAEARAAEEG 77
            D G  GDKG   CPG     G+        G  + G +    EEG
Sbjct: 1432 DTGPQGDKGIAGCPGAWGQKGLKGFSGPKGGHGDDGIDGLDGEEG 1476


>gi|226437602 NK1 homeobox 2 [Homo sapiens]
          Length = 310

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 7/67 (10%)

Query: 412 AAYGADRPFHLSARDAREAVHAWRERLSREQVRQVEA--ACAPAMRLLAYPRSG----EE 465
           AA  A RP    AR +   V A ++  SR+ VRQ+E   A  P     A P  G    EE
Sbjct: 34  AALPAVRPAPREARKSLAEVEAGKDASSRDPVRQLETPDAAGPGAG-QASPLEGSEAEEE 92

Query: 466 GDAEQPR 472
            DAE PR
Sbjct: 93  EDAEDPR 99


>gi|119508426 alpha 3 type IX collagen [Homo sapiens]
          Length = 684

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 35  GRDGDKGAEHCPGLQRSLGVWSLEAAAAGEREQGAEARAAE--EGGANQSPRFP--SNLS 90
           G+ G+ G    PG +   G+  L   A  + E+G   RA E  E G +  P  P  + + 
Sbjct: 316 GQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEAGPSGEPGVPGDAGMP 375

Query: 91  GAVGEAVSR 99
           G  GEA  R
Sbjct: 376 GERGEAGHR 384


>gi|116089312 heparan sulfate (glucosamine) 3-O-sulfotransferase 6
           [Homo sapiens]
          Length = 311

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 17/126 (13%)

Query: 351 AW--LRDLLFARGAPAWLR----RRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAALDAF 404
           AW  +R  L+A+    WLR      +L +  E LV  P  ++ R+  F GL+ +     F
Sbjct: 188 AWSAVRIGLYAQHLDHWLRYFPLSHFLFVSGERLVSDPAGEVGRVQDFLGLKRVVTDKHF 247

Query: 405 ALNMTRG-----AAYGADRPFHLSARDAREAVHAWRERLSREQVRQVEAACAPAMRLLAY 459
             N T+G      A G  RP  L     R        R+ +  VR+++    P  R   Y
Sbjct: 248 YFNATKGFPCLKKAQGGSRPRCLGKSKGRP-----HPRVPQALVRRLQEFYRPFNRRF-Y 301

Query: 460 PRSGEE 465
             +G++
Sbjct: 302 QMTGQD 307


>gi|50843837 hypothetical protein LOC55701 [Homo sapiens]
          Length = 1519

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 7/66 (10%)

Query: 27  LVPSVLDGGRDGDKGAEHCPGLQRSLGVWSLEAAAAGEREQGAEARAAEEGGANQSPRFP 86
           L P  L GG  G +GAE  PG  R  G           R++ A  R A   G + +P  P
Sbjct: 350 LRPGELRGGGGGGQGAEGPPGTPRRTG-------KGNRRKKRAAGRGALSRGGDSAPLSP 402

Query: 87  SNLSGA 92
            +   A
Sbjct: 403 GDKEDA 408


>gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 412 AAYGADRPFHLSARDAREAVHAWRERLSREQVRQVEAA----CAPAMRLLAYP-RSGEEG 466
           AA  A RP    AR +   V A ++  SR+ VRQ+E       A  +   A+P  S +  
Sbjct: 34  AALPAVRPAPREARKSLAEVEAGKDASSRDPVRQLETPGQGFAASLLTRQAHPHHSSDAR 93

Query: 467 DAEQPREGE-TPLE 479
           DA  P  G+ +PLE
Sbjct: 94  DAAGPGAGQASPLE 107


>gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 412 AAYGADRPFHLSARDAREAVHAWRERLSREQVRQVEAA----CAPAMRLLAYP-RSGEEG 466
           AA  A RP    AR +   V A ++  SR+ VRQ+E       A  +   A+P  S +  
Sbjct: 34  AALPAVRPAPREARKSLAEVEAGKDASSRDPVRQLETPGQGFAASLLTRQAHPHHSSDAR 93

Query: 467 DAEQPREGE-TPLE 479
           DA  P  G+ +PLE
Sbjct: 94  DAAGPGAGQASPLE 107


>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 18/41 (43%), Positives = 20/41 (48%)

Query: 58  EAAAAGEREQGAEARAAEEGGANQSPRFPSNLSGAVGEAVS 98
           E AAAG R +G   R A  G A Q P     L+ AV  A S
Sbjct: 233 EEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLAAS 273


>gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 412 AAYGADRPFHLSARDAREAVHAWRERLSREQVRQVEAA----CAPAMRLLAYP-RSGEEG 466
           AA  A RP    AR +   V A ++  SR+ VRQ+E       A  +   A+P  S +  
Sbjct: 34  AALPAVRPAPREARKSLAEVEAGKDASSRDPVRQLETPGQGFAASLLTRQAHPHHSSDAR 93

Query: 467 DAEQPREGE-TPLE 479
           DA  P  G+ +PLE
Sbjct: 94  DAAGPGAGQASPLE 107


>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 18/41 (43%), Positives = 20/41 (48%)

Query: 58  EAAAAGEREQGAEARAAEEGGANQSPRFPSNLSGAVGEAVS 98
           E AAAG R +G   R A  G A Q P     L+ AV  A S
Sbjct: 233 EEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLAAS 273


>gi|37537554 hypothetical protein FLJ37538 [Homo sapiens]
          Length = 841

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 174 PGDPAARAPDTANLTTAALFRWRTNKVI-CSPPLCPGAPRARAEVGLVEDTACERSCPPV 232
           PG P  +A     + +A   +  T+ V+   PPL  G P+   E+ ++    C  S PPV
Sbjct: 450 PGPPKDKAVSYTMVYSAV--KVTTHSVLPAGPPLGAGEPKTEKEISVLHGMLCTSSRPPV 507


>gi|8393264 delta-like 3 protein isoform 1 precursor [Homo sapiens]
          Length = 618

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 29/129 (22%)

Query: 343 GALEVICEAWLRDLLFARGAPAWLRRRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAALD 402
           G    I E W  +L    G PAW                       L R +G R LAA  
Sbjct: 118 GTFSFIIETWREELGDQIGGPAW---------------------SLLARVAGRRRLAAGG 156

Query: 403 AFALNMTRGAAYGADRPFHLSARDAREAVHAWRERLSREQVRQVEAACAPAMRLLAYPRS 462
            +A ++ R  A+  +  F   AR    AV     RL R   R   + C P +R    P +
Sbjct: 157 PWARDIQRAGAW--ELRFSYRARCEPPAVGTACTRLCRP--RSAPSRCGPGLR----PCA 208

Query: 463 GEEGDAEQP 471
             E + E P
Sbjct: 209 PLEDECEAP 217


>gi|45243561 delta-like 3 protein isoform 2 precursor [Homo sapiens]
          Length = 587

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 29/129 (22%)

Query: 343 GALEVICEAWLRDLLFARGAPAWLRRRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAALD 402
           G    I E W  +L    G PAW                       L R +G R LAA  
Sbjct: 118 GTFSFIIETWREELGDQIGGPAW---------------------SLLARVAGRRRLAAGG 156

Query: 403 AFALNMTRGAAYGADRPFHLSARDAREAVHAWRERLSREQVRQVEAACAPAMRLLAYPRS 462
            +A ++ R  A+  +  F   AR    AV     RL R   R   + C P +R    P +
Sbjct: 157 PWARDIQRAGAW--ELRFSYRARCEPPAVGTACTRLCRP--RSAPSRCGPGLR----PCA 208

Query: 463 GEEGDAEQP 471
             E + E P
Sbjct: 209 PLEDECEAP 217


>gi|153791244 hypothetical protein LOC55237 [Homo sapiens]
          Length = 702

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 32/111 (28%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 358 FARGAPAWLRRRYLRLRYEDLVRQPRAQLRRLLRFSGLRALAALDAFALNMTR------- 410
           F R  P   R  Y   R + L R P  +    L  +G   LA++   A+   +       
Sbjct: 424 FKRRFPGISRSTYYNWRRKALRRNPSFKPAPALSAAGTPQLASVGEGAVIPWKSEAEEGA 483

Query: 411 GAAYGADRPFHLSARDAREAVHAWRERLSREQVRQVEAACAPAMRL-LAYP 460
           G A G D P        R  +  W+ RL R   RQV +   P  R  L YP
Sbjct: 484 GNATGEDPPAPGELLPLRMPLSRWQRRLRRAARRQVLSGHLPFCRFRLRYP 534


>gi|154937330 sodium-dependent glucose transporter 1 [Homo sapiens]
          Length = 518

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 11/121 (9%)

Query: 11  YCKFALLLVLYTLVLLLVPSVLDGGRD-------GDKGAEHCPGLQRSLGVWSLEAAAAG 63
           +CK A+LL +   +  +   +LD G +       GDKGA H   L  S  + +  A    
Sbjct: 81  FCKTAILLTVMMSIFGVSIGILDTGGNVLILAIWGDKGAPHMQALHFSFALGAFLAPLLA 140

Query: 64  EREQGAEARAAEEGGANQSPRFPSNLSGAVGEA---VSREKQHIYVHATWRTGSSFLGEL 120
           +   G  A A     ++  P   +  S A  EA   V  +K  ++ +A   T    +  +
Sbjct: 141 KLALGPTASAENHTESDFHPAL-NQSSDADSEALFGVPNDKNLLWAYAVIGTYMFLVSVI 199

Query: 121 F 121
           F
Sbjct: 200 F 200


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,867,973
Number of Sequences: 37866
Number of extensions: 924171
Number of successful extensions: 2979
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2928
Number of HSP's gapped (non-prelim): 44
length of query: 486
length of database: 18,247,518
effective HSP length: 106
effective length of query: 380
effective length of database: 14,233,722
effective search space: 5408814360
effective search space used: 5408814360
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.