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Search of human proteins with 23238208
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23238208 interleukin 17A receptor precursor [Homo sapiens]
(866 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23238208 interleukin 17A receptor precursor [Homo sapiens] 1793 0.0
gi|27477074 interleukin 17B receptor precursor [Homo sapiens] 149 1e-35
gi|166063983 interleukin 17 receptor D [Homo sapiens] 101 3e-21
gi|24430197 interleukin 17 receptor C isoform 1 precursor [Homo ... 56 2e-07
gi|90669934 interleukin 17 receptor C isoform 3 precursor [Homo ... 56 2e-07
gi|24430195 interleukin 17 receptor C isoform 2 precursor [Homo ... 56 2e-07
gi|61742808 hypothetical protein LOC283638 isoform 2 [Homo sapiens] 46 1e-04
gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo sapi... 46 1e-04
gi|5032179 tripartite motif-containing 28 protein [Homo sapiens] 41 0.004
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 41 0.005
gi|24430210 interleukin 17 receptor E isoform 1 [Homo sapiens] 40 0.009
gi|24430206 interleukin 17 receptor E isoform 2 [Homo sapiens] 40 0.009
gi|24430204 interleukin 17 receptor E isoform 1 [Homo sapiens] 40 0.009
gi|24497460 Shaw-related voltage-gated potassium channel protein... 39 0.027
gi|224493919 zinc finger and SCAN domain containing 18 isoform 2... 36 0.13
gi|224493912 zinc finger and SCAN domain containing 18 isoform 3... 36 0.13
gi|222144283 hypothetical protein LOC65998 [Homo sapiens] 36 0.13
gi|226371704 zinc finger and SCAN domain containing 18 isoform 3... 36 0.13
gi|224493905 zinc finger and SCAN domain containing 18 isoform 1... 36 0.13
gi|45827729 scribble isoform b [Homo sapiens] 36 0.13
gi|45827731 scribble isoform a [Homo sapiens] 36 0.13
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 36 0.13
gi|21313638 leucine-rich repeat LGI family, member 2 [Homo sapiens] 36 0.13
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 36 0.18
gi|190684671 mitogen-activated protein kinase binding protein 1 ... 35 0.23
gi|190684677 mitogen-activated protein kinase binding protein 1 ... 35 0.23
gi|221139761 zinc finger protein 853 [Homo sapiens] 35 0.30
gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens] 35 0.30
gi|31982899 seven in absentia homolog 2 [Homo sapiens] 35 0.30
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 35 0.30
>gi|23238208 interleukin 17A receptor precursor [Homo sapiens]
Length = 866
Score = 1793 bits (4643), Expect = 0.0
Identities = 866/866 (100%), Positives = 866/866 (100%)
Query: 1 MGAARSPPSAVPGPLLGLLLLLLGVLAPGGASLRLLDHRALVCSQPGLNCTVKNSTCLDD 60
MGAARSPPSAVPGPLLGLLLLLLGVLAPGGASLRLLDHRALVCSQPGLNCTVKNSTCLDD
Sbjct: 1 MGAARSPPSAVPGPLLGLLLLLLGVLAPGGASLRLLDHRALVCSQPGLNCTVKNSTCLDD 60
Query: 61 SWIHPRNLTPSSPKDLQIQLHFAHTQQGDLFPVAHIEWTLQTDASILYLEGAELSVLQLN 120
SWIHPRNLTPSSPKDLQIQLHFAHTQQGDLFPVAHIEWTLQTDASILYLEGAELSVLQLN
Sbjct: 61 SWIHPRNLTPSSPKDLQIQLHFAHTQQGDLFPVAHIEWTLQTDASILYLEGAELSVLQLN 120
Query: 121 TNERLCVRFEFLSKLRHHHRRWRFTFSHFVVDPDQEYEVTVHHLPKPIPDGDPNHQSKNF 180
TNERLCVRFEFLSKLRHHHRRWRFTFSHFVVDPDQEYEVTVHHLPKPIPDGDPNHQSKNF
Sbjct: 121 TNERLCVRFEFLSKLRHHHRRWRFTFSHFVVDPDQEYEVTVHHLPKPIPDGDPNHQSKNF 180
Query: 181 LVPDCEHARMKVTTPCMSSGSLWDPNITVETLEAHQLRVSFTLWNESTHYQILLTSFPHM 240
LVPDCEHARMKVTTPCMSSGSLWDPNITVETLEAHQLRVSFTLWNESTHYQILLTSFPHM
Sbjct: 181 LVPDCEHARMKVTTPCMSSGSLWDPNITVETLEAHQLRVSFTLWNESTHYQILLTSFPHM 240
Query: 241 ENHSCFEHMHHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSAT 300
ENHSCFEHMHHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSAT
Sbjct: 241 ENHSCFEHMHHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCLNDCLRHSAT 300
Query: 301 VSCPEMPDTPEPIPDYMPLWVYWFITGISILLVGSVILLIVCMTWRLAGPGSEKYSDDTK 360
VSCPEMPDTPEPIPDYMPLWVYWFITGISILLVGSVILLIVCMTWRLAGPGSEKYSDDTK
Sbjct: 301 VSCPEMPDTPEPIPDYMPLWVYWFITGISILLVGSVILLIVCMTWRLAGPGSEKYSDDTK 360
Query: 361 YTDGLPAADLIPPPLKPRKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAI 420
YTDGLPAADLIPPPLKPRKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAI
Sbjct: 361 YTDGLPAADLIPPPLKPRKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAI 420
Query: 421 SEAGVMTWVGRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVGDLFT 480
SEAGVMTWVGRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVGDLFT
Sbjct: 421 SEAGVMTWVGRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVGDLFT 480
Query: 481 AAMNMILPDFKRPACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLE 540
AAMNMILPDFKRPACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLE
Sbjct: 481 AAMNMILPDFKRPACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLE 540
Query: 541 MFQPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQDAPS 600
MFQPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQDAPS
Sbjct: 541 MFQPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVRCPDWFECENLYSADDQDAPS 600
Query: 601 LDEEVFEEPLLPPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQP 660
LDEEVFEEPLLPPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQP
Sbjct: 601 LDEEVFEEPLLPPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQP 660
Query: 661 APQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPGAGRNSVLFLP 720
APQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPGAGRNSVLFLP
Sbjct: 661 APQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPGAGRNSVLFLP 720
Query: 721 VDPEDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFEQSLSCQAQGGCSRPAMVLTDPHT 780
VDPEDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFEQSLSCQAQGGCSRPAMVLTDPHT
Sbjct: 721 VDPEDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFEQSLSCQAQGGCSRPAMVLTDPHT 780
Query: 781 PYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPEDLESLRSLQ 840
PYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPEDLESLRSLQ
Sbjct: 781 PYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPEDLESLRSLQ 840
Query: 841 RQLLFRQLQKNSGWDTMGSESEGPSA 866
RQLLFRQLQKNSGWDTMGSESEGPSA
Sbjct: 841 RQLLFRQLQKNSGWDTMGSESEGPSA 866
>gi|27477074 interleukin 17B receptor precursor [Homo sapiens]
Length = 502
Score = 149 bits (375), Expect = 1e-35
Identities = 124/496 (25%), Positives = 209/496 (42%), Gaps = 47/496 (9%)
Query: 39 RALVCSQPGLNCTVKNSTCLDDSWIHPRNLTPSSPKDLQIQLHFAHTQQGDLFPVAHIEW 98
R+ V +P + C + T W+ +L P +DL+++ GD + ++ W
Sbjct: 13 RSAVPREPTVQCG--SETGPSPEWMLQHDLIPGDLRDLRVEPVTTSVATGDYSILMNVSW 70
Query: 99 TLQTDASILYLEGAELSVL-QLNTNERLCVRFEFLSKLRHHHR----RWRFTFSHFVVDP 153
L+ DASI L+ ++ V + N CVR + + R +W F++ F V+
Sbjct: 71 VLRADASIRLLKATKICVTGKSNFQSYSCVRCNYTEAFQTQTRPSGGKWTFSYIGFPVEL 130
Query: 154 DQEYEVTVHHLPKPIPDGDPNHQSKNFLVPDCEHARMKVTTPCMSSGSLWDPNITVETLE 213
+ Y + H++P + D S NF P C MK C+ +GSLWDPNIT
Sbjct: 131 NTVYFIGAHNIPNANMNEDGPSMSVNFTSPGCLDHIMKYKKKCVKAGSLWDPNITACKKN 190
Query: 214 AHQLRVSFTLWNESTHYQILLTSFPHMENHSCFEHMHHIPAPRPEEFHQRSNVTLTLRNL 273
+ V+FT Y L+ HS + P ++ + S V +
Sbjct: 191 EETVEVNFTTTPLGNRYMALI-------QHSTIIGFSQVFEPHQKKQTRASVVIPVTGDS 243
Query: 274 KGCCRHQVQIQPFFSSCLNDCLRHSATVSCPEMPDTPEPIPDYMPLWVYWF-ITGISILL 332
+G VQ+ P+F +C +DC+RH TV P P+ + W + +S+L+
Sbjct: 244 EGA---TVQLTPYFPTCGSDCIRHKGTVVLCPQTGVPFPLDNNKSKPGGWLPLLLLSLLV 300
Query: 333 VGSVILLIVCMTWRLAGPGSEKYSDDTKYTDGLPAADLIPPPLKPRKVWIIYSADHPLYV 392
V++ + + WR +S T L+P P KV ++Y ++ +
Sbjct: 301 ATWVLVAGIYLMWRHERIKKTSFSTTT----------LLP----PIKVLVVYPSE-ICFH 345
Query: 393 DVVLKFAQFLLTACGTEVALDLLEEQAISEAGVMTWVGRQKQEMVESNSKIIVLCSRGTR 452
+ F +FL C +EV L+ +++ I+E G + W+ QK ++ K++ L S
Sbjct: 346 HTICYFTEFLQNHCRSEVILEKWQKKKIAEMGPVQWLATQK----KAADKVVFLLSNDVN 401
Query: 453 AKWQALLGR--GAPVRLRCDHGKPVGDLFTAAMNMILPDFKRPACFGTYVVCYFSEVSCD 510
+ G+ G+P + DLF A N+ D + YVV YF E+
Sbjct: 402 SVCDGTCGKSEGSP-------SENSQDLFPLAFNLFCSDLRSQIHLHKYVVVYFREIDTK 454
Query: 511 GDVPDLFGAAPRYPLM 526
D + P+Y LM
Sbjct: 455 DDY-NALSVCPKYHLM 469
>gi|166063983 interleukin 17 receptor D [Homo sapiens]
Length = 739
Score = 101 bits (251), Expect = 3e-21
Identities = 125/442 (28%), Positives = 186/442 (42%), Gaps = 76/442 (17%)
Query: 353 EKYSDDTKYTDGLPAADLIPPPLKPRKVWIIYSA-DHPLYVDVVLKFAQFLLTACGTEVA 411
E+ S+ + YT LP L P P KV++ YS+ D +++VV FA FL CG EVA
Sbjct: 335 EESSESSTYTAALPRERLRPRP----KVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVA 390
Query: 412 LDLLEEQAISEAGVMTWVGRQKQEMVESNSKIIVLCSRGTR----AKWQALLGRGAPVRL 467
LDL E+ ++ G WV + + + IIV+CS+G + K G G
Sbjct: 391 LDLWEDFSLCREGQREWV----IQKIHESQFIIVVCSKGMKYFVDKKNYKHKGGG----- 441
Query: 468 RCDHGKPVGDLFTAAMNMILPDFKR-----PACFGTYVVCYFSEVSCDGDVPDLFGAAPR 522
G G+LF A++ I ++ A ++ YF + SC+GDVP + + +
Sbjct: 442 ---RGSGKGELFLVAVSAIAEKLRQAKQSSSAALSKFIAVYF-DYSCEGDVPGILDLSTK 497
Query: 523 YPLMDRFEEV--YFRIQDLEMFQPGRMHRVGELSGDNYLRSPGGRQLRAALDRFRDWQVR 580
Y LMD ++ + +D + +PG+ R G S NY RS GR L A+ +
Sbjct: 498 YRLMDNLPQLCSHLHSRDHGLQEPGQHTRQG--SRRNYFRSKSGRSLYVAICNMHQFIDE 555
Query: 581 CPDWFECENLYSADDQDAPSLDEEVFEEPLLPP-GTGIVKRAPLVRE-PGSQACLAIDPL 638
PDWFE + + P L + EP+L +G+V + + P S CL ++
Sbjct: 556 EPDWFEKQFV----PFHPPPLR---YREPVLEKFDSGLVLNDVMCKPGPESDFCLKVEAA 608
Query: 639 VGEEGGAAVAKLEPHLQPRGQPAPQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAG 698
V G A ++ E ++ G L E P DG+A L
Sbjct: 609 VLGATGPADSQHE--------------------SQHGGLDQDGEARPALDGSAALQPLLH 648
Query: 699 EGEACPLLGSPG-AGRNSVLF---LPVDPEDSPL--GSSTPMASPDLLPEDVR------E 746
+A GSP R+S ++ +P PL G ST L E V E
Sbjct: 649 TVKA----GSPSDMPRDSGIYDSSVPSSELSLPLMEGLSTDQTETSSLTESVSSSSGLGE 704
Query: 747 HLEGLMLSLFEQSLSCQAQGGC 768
+ S S SC+A GC
Sbjct: 705 EEPPALPSKLLSSGSCKADLGC 726
>gi|24430197 interleukin 17 receptor C isoform 1 precursor [Homo
sapiens]
Length = 791
Score = 55.8 bits (133), Expect = 2e-07
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 22/198 (11%)
Query: 378 RKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAISEAGVMTWVGRQKQEMV 437
R ++YSAD + +V A L VA+DL + +S G + W Q+++ +
Sbjct: 584 RAALLLYSADDSGFERLVGALAS-ALCQLPLRVAVDLWSRRELSAQGPVAWFHAQRRQTL 642
Query: 438 ESNSKIIVLCSRGTRA---KW--QALLGRGAPVRLRCDHGKPVGDLFTAAMNMILPDFKR 492
+ +++L S G A +W + G GA HG D F A+++ +LPDF +
Sbjct: 643 QEGGVVVLLFSPGAVALCSEWLQDGVSGPGA-------HGPH--DAFRASLSCVLPDFLQ 693
Query: 493 PACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLEMFQPGRMHRVGE 552
G+YV F + VP LF P + L + + +Q + GR+ E
Sbjct: 694 GRAPGSYVGACFDRLLHPDAVPALFRTVPVFTLPSQLPDFLGALQQPRAPRSGRLQERAE 753
Query: 553 LSG-------DNYLRSPG 563
D+Y PG
Sbjct: 754 QVSRALQPALDSYFHPPG 771
>gi|90669934 interleukin 17 receptor C isoform 3 precursor [Homo
sapiens]
Length = 705
Score = 55.8 bits (133), Expect = 2e-07
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 22/198 (11%)
Query: 378 RKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAISEAGVMTWVGRQKQEMV 437
R ++YSAD + +V A L VA+DL + +S G + W Q+++ +
Sbjct: 498 RAALLLYSADDSGFERLVGALAS-ALCQLPLRVAVDLWSRRELSAQGPVAWFHAQRRQTL 556
Query: 438 ESNSKIIVLCSRGTRA---KW--QALLGRGAPVRLRCDHGKPVGDLFTAAMNMILPDFKR 492
+ +++L S G A +W + G GA HG D F A+++ +LPDF +
Sbjct: 557 QEGGVVVLLFSPGAVALCSEWLQDGVSGPGA-------HGPH--DAFRASLSCVLPDFLQ 607
Query: 493 PACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLEMFQPGRMHRVGE 552
G+YV F + VP LF P + L + + +Q + GR+ E
Sbjct: 608 GRAPGSYVGACFDRLLHPDAVPALFRTVPVFTLPSQLPDFLGALQQPRAPRSGRLQERAE 667
Query: 553 LSG-------DNYLRSPG 563
D+Y PG
Sbjct: 668 QVSRALQPALDSYFHPPG 685
>gi|24430195 interleukin 17 receptor C isoform 2 precursor [Homo
sapiens]
Length = 720
Score = 55.8 bits (133), Expect = 2e-07
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 22/198 (11%)
Query: 378 RKVWIIYSADHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAISEAGVMTWVGRQKQEMV 437
R ++YSAD + +V A L VA+DL + +S G + W Q+++ +
Sbjct: 513 RAALLLYSADDSGFERLVGALAS-ALCQLPLRVAVDLWSRRELSAQGPVAWFHAQRRQTL 571
Query: 438 ESNSKIIVLCSRGTRA---KW--QALLGRGAPVRLRCDHGKPVGDLFTAAMNMILPDFKR 492
+ +++L S G A +W + G GA HG D F A+++ +LPDF +
Sbjct: 572 QEGGVVVLLFSPGAVALCSEWLQDGVSGPGA-------HGPH--DAFRASLSCVLPDFLQ 622
Query: 493 PACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLMDRFEEVYFRIQDLEMFQPGRMHRVGE 552
G+YV F + VP LF P + L + + +Q + GR+ E
Sbjct: 623 GRAPGSYVGACFDRLLHPDAVPALFRTVPVFTLPSQLPDFLGALQQPRAPRSGRLQERAE 682
Query: 553 LSG-------DNYLRSPG 563
D+Y PG
Sbjct: 683 QVSRALQPALDSYFHPPG 700
>gi|61742808 hypothetical protein LOC283638 isoform 2 [Homo sapiens]
Length = 1484
Score = 46.2 bits (108), Expect = 1e-04
Identities = 68/280 (24%), Positives = 101/280 (36%), Gaps = 46/280 (16%)
Query: 619 KRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQP--------RGQPAPQPLHTLVL 670
+R+P R PG + +G++ G AV +P P QP+P P V
Sbjct: 713 RRSP--RAPGEPTPASF--FIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSP-PARDGVY 767
Query: 671 AAEEGALVAAVEPG--PLADGAAVRLALAGEGEACPLLGSPGAGRNSVLFLPVDPEDSPL 728
+ G +V + PG P DG A P G P G+ P PL
Sbjct: 768 VSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGK------PPHISSHPL 821
Query: 729 G---SSTPMASPD-------LLPEDVREHLEGLMLSLFEQSLSCQAQGGCS-RPAMVLTD 777
++T A D L+ ++ L L L S+ + +GG + RP
Sbjct: 822 LQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALS 881
Query: 778 PHTPYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPAL----------- 826
+ + S++S + S ++PQP EM QDPG AL
Sbjct: 882 GDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQ 941
Query: 827 --PLSPEDLESLRSLQRQLLFRQLQKNSGWDTMGSESEGP 864
PL P D+ ++R + R + D SE GP
Sbjct: 942 HHPLGPTDMGRGEPVRRSAIRRGHRPRGSLD-WPSEERGP 980
>gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo sapiens]
Length = 1554
Score = 46.2 bits (108), Expect = 1e-04
Identities = 68/280 (24%), Positives = 101/280 (36%), Gaps = 46/280 (16%)
Query: 619 KRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQP--------RGQPAPQPLHTLVL 670
+R+P R PG + +G++ G AV +P P QP+P P V
Sbjct: 783 RRSP--RAPGEPTPASF--FIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSP-PARDGVY 837
Query: 671 AAEEGALVAAVEPG--PLADGAAVRLALAGEGEACPLLGSPGAGRNSVLFLPVDPEDSPL 728
+ G +V + PG P DG A P G P G+ P PL
Sbjct: 838 VSANGRMVIQLRPGRSPEPDGPAPAFLRQESFTKEPASGPPAPGK------PPHISSHPL 891
Query: 729 G---SSTPMASPD-------LLPEDVREHLEGLMLSLFEQSLSCQAQGGCS-RPAMVLTD 777
++T A D L+ ++ L L L S+ + +GG + RP
Sbjct: 892 LQDLAATRAARMDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALS 951
Query: 778 PHTPYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPAL----------- 826
+ + S++S + S ++PQP EM QDPG AL
Sbjct: 952 GDSDVDTASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQ 1011
Query: 827 --PLSPEDLESLRSLQRQLLFRQLQKNSGWDTMGSESEGP 864
PL P D+ ++R + R + D SE GP
Sbjct: 1012 HHPLGPTDMGRGEPVRRSAIRRGHRPRGSLD-WPSEERGP 1050
>gi|5032179 tripartite motif-containing 28 protein [Homo sapiens]
Length = 835
Score = 41.2 bits (95), Expect = 0.004
Identities = 35/109 (32%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 638 LVGEEGGAAVAKLEPHLQPRGQPAPQPLHTLVLAAEEGALVAAVEPGPLADG---AAVRL 694
+V E G AA A +P P G P PL + + EE A P +G V +
Sbjct: 520 IVIERGAAAAATGQPGTAPAGTPGAPPLAGMAIVKEEETEAAIGAPPTATEGPETKPVLM 579
Query: 695 ALA-GEGEACPLLGSPGAGRNSVLFLPVDPEDSPLGSSTPMASPDLLPE 742
ALA G G P L SP +S L + +P G+S P P L +
Sbjct: 580 ALAEGPGAEGPRLASPSGSTSSGLEVV-----APEGTSAPGGGPGTLDD 623
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 40.8 bits (94), Expect = 0.005
Identities = 66/251 (26%), Positives = 91/251 (36%), Gaps = 34/251 (13%)
Query: 588 ENLYSADDQDAPSLDEEVFEEPLLPPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAV 647
E L+ + + P L V EEP L P +P EP CL+ P EE +
Sbjct: 802 EELHLSPQTEEPHLSP-VPEEPCLSPQPEESHLSPQSEEP----CLSPRP---EESHLSP 853
Query: 648 AKLEPHLQPRGQPAPQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLG 707
+P L PR + P EE A E PL GE PLLG
Sbjct: 854 ELEKPPLSPRPEKPP----------EEPGQCPAPEELPL-------FPPPGEPSLSPLLG 896
Query: 708 SPGAGRNSVLFLPVDPEDSPLG-SSTPMASPDLLPED-VREHLEGLMLSLFEQSLSCQAQ 765
P L PE+ PL S P SP L+P D + L ++ + +LS +
Sbjct: 897 EPALSEPGEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAPPALSPLGE 956
Query: 766 GGCSRPAMVLTDPHTPYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPA 825
A +DP +P ++ S + + P+P + PG P
Sbjct: 957 LEYPFGAKGDSDPESPLAAPILETPISPPPEANCTDPEPVPPMI-------LPPSPGSPV 1009
Query: 826 LPLSPEDLESL 836
P SP +E L
Sbjct: 1010 GPASPILMEPL 1020
Score = 32.3 bits (72), Expect = 1.9
Identities = 68/309 (22%), Positives = 109/309 (35%), Gaps = 50/309 (16%)
Query: 598 APSLDEEVFEEPLLPPGTGIVKRAPLVR--EPG-SQACLAIDPLVGEEGGAAVAKLEPHL 654
+P L E EP PP + + + PL EP S + DPL A P L
Sbjct: 892 SPLLGEPALSEPGEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAPPAL 951
Query: 655 QPRGQPAPQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLL------GS 708
P G+ P + E L A + P++ + E P + GS
Sbjct: 952 SPLGE-LEYPFGAKGDSDPESPLAAPILETPISPPPEANCT---DPEPVPPMILPPSPGS 1007
Query: 709 PGAGRNSVLFLPVDPEDSPL--------GSSTPMASPDLLPEDVREHLE--GLMLSLFEQ 758
P + +L P+ P+ SPL S SP LP V L G ++ + ++
Sbjct: 1008 PVGPASPILMEPLPPQCSPLLQHSLVPQNSPPSQCSPPALPLSVPSPLSPIGKVVGVSDE 1067
Query: 759 SLSCQAQGGCSRPAMVLTDPHTPYEEEQRQS-VQSDQGYISRSSPQPP------------ 805
+ + + +++P P E S + S G +S +P P
Sbjct: 1068 AELHEME------TEKVSEPECPALEPSATSPLPSPMGDLSCPAPSPAPALDDFSGLGED 1121
Query: 806 ----EGLTEMEEEEEEEQDPGKPALPLSPE----DLESLRSLQRQLLFRQLQKNSGWDTM 857
+G+ + E Q PG A L D E L + ++ + ++ +G +
Sbjct: 1122 TAPLDGIDAPGSQPEPGQTPGSLASELKGSPVLLDPEELAPVTPMEVYPECKQTAGQGSP 1181
Query: 858 GSESEGPSA 866
E E P A
Sbjct: 1182 CEEQEEPRA 1190
Score = 30.4 bits (67), Expect = 7.4
Identities = 62/230 (26%), Positives = 78/230 (33%), Gaps = 43/230 (18%)
Query: 612 PPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQPAPQPLHTLVLA 671
P G + P +EPG C A PL G A +LEP L+ PL+
Sbjct: 396 PKGGHVTSMQP--KEPGPLQCEA-KPL-----GKAGVQLEPQLEA-------PLN----- 435
Query: 672 AEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPGAGRNSVL--FLPVDPEDSPLG 729
EE L+ E PL+ E P P A R S LP P L
Sbjct: 436 -EEMPLLPPPEESPLSPPP----------EESPTSPPPEASRLSPPPEELPASPLPEALH 484
Query: 730 SSTPMASPDLLPEDVREHL----EGLMLSLFEQSLSCQAQGGCSRPAMVLTDPHTPYEEE 785
S P+ L P L E S E+S + S P+ L P +P E
Sbjct: 485 LSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEE--SPPSPALETPLSPPPEA 542
Query: 786 QRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPEDLES 835
S ++ +S PPE L E P P+SP ES
Sbjct: 543 SPLSPPFEESPLS----PPPEELPTSPPPEASRLSPPPEESPMSPPPEES 588
>gi|24430210 interleukin 17 receptor E isoform 1 [Homo sapiens]
Length = 667
Score = 40.0 bits (92), Expect = 0.009
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 30/159 (18%)
Query: 372 PPPLKPRKVWIIYSADHPLYVDVVLKFAQFLLTACG--TEVALDLLEEQAISEAGVMTWV 429
P P +P V ++++AD +V A+ L A G +V +DL E + ++ G + W+
Sbjct: 484 PGPARP--VLLLHAADSEAQRRLVGALAELLRAALGGGRDVIVDLWEGRHVARVGPLPWL 541
Query: 430 GRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVG--DLFTAAMNMIL 487
+ + +++L S GA +R PV D A + +L
Sbjct: 542 WAARTRVAREQGTVLLLWS-------------GADLR-------PVSGPDPRAAPLLALL 581
Query: 488 PDFKRPACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLM 526
RP ++ YFS + GD+P A PRY L+
Sbjct: 582 HAAPRPLL----LLAYFSRLCAKGDIPPPLRALPRYRLL 616
>gi|24430206 interleukin 17 receptor E isoform 2 [Homo sapiens]
Length = 551
Score = 40.0 bits (92), Expect = 0.009
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 30/159 (18%)
Query: 372 PPPLKPRKVWIIYSADHPLYVDVVLKFAQFLLTACG--TEVALDLLEEQAISEAGVMTWV 429
P P +P V ++++AD +V A+ L A G +V +DL E + ++ G + W+
Sbjct: 368 PGPARP--VLLLHAADSEAQRRLVGALAELLRAALGGGRDVIVDLWEGRHVARVGPLPWL 425
Query: 430 GRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVG--DLFTAAMNMIL 487
+ + +++L S GA +R PV D A + +L
Sbjct: 426 WAARTRVAREQGTVLLLWS-------------GADLR-------PVSGPDPRAAPLLALL 465
Query: 488 PDFKRPACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLM 526
RP ++ YFS + GD+P A PRY L+
Sbjct: 466 HAAPRPLL----LLAYFSRLCAKGDIPPPLRALPRYRLL 500
>gi|24430204 interleukin 17 receptor E isoform 1 [Homo sapiens]
Length = 667
Score = 40.0 bits (92), Expect = 0.009
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 30/159 (18%)
Query: 372 PPPLKPRKVWIIYSADHPLYVDVVLKFAQFLLTACG--TEVALDLLEEQAISEAGVMTWV 429
P P +P V ++++AD +V A+ L A G +V +DL E + ++ G + W+
Sbjct: 484 PGPARP--VLLLHAADSEAQRRLVGALAELLRAALGGGRDVIVDLWEGRHVARVGPLPWL 541
Query: 430 GRQKQEMVESNSKIIVLCSRGTRAKWQALLGRGAPVRLRCDHGKPVG--DLFTAAMNMIL 487
+ + +++L S GA +R PV D A + +L
Sbjct: 542 WAARTRVAREQGTVLLLWS-------------GADLR-------PVSGPDPRAAPLLALL 581
Query: 488 PDFKRPACFGTYVVCYFSEVSCDGDVPDLFGAAPRYPLM 526
RP ++ YFS + GD+P A PRY L+
Sbjct: 582 HAAPRPLL----LLAYFSRLCAKGDIPPPLRALPRYRLL 616
>gi|24497460 Shaw-related voltage-gated potassium channel protein 3
[Homo sapiens]
Length = 757
Score = 38.5 bits (88), Expect = 0.027
Identities = 44/155 (28%), Positives = 56/155 (36%), Gaps = 33/155 (21%)
Query: 609 PLLPPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQPAPQPLHTL 668
P+ PP G+ P + L L G GG + L P P G+P P
Sbjct: 599 PITPPSMGVTVAGAYPAGPHTHPGL----LRGGAGGLGIMGLPPLPAP-GEPCP------ 647
Query: 669 VLAAEEGALVAAVEPGPLADGAAVRLALAGEGEACPLLGSPGA----------------G 712
LA EE + +P P D AA LA E CP + P
Sbjct: 648 -LAQEEVIEINRADPRPNGDPAAAALA----HEDCPAIDQPAMSPEDKSPITPGSRGRYS 702
Query: 713 RNSVLFLPVDPEDSPLGS-STPMASPDLLPEDVRE 746
R+ FL D SP GS +P L P+D R+
Sbjct: 703 RDRACFLLTDYAPSPDGSIRKATGAPPLPPQDWRK 737
>gi|224493919 zinc finger and SCAN domain containing 18 isoform 2
[Homo sapiens]
Length = 374
Score = 36.2 bits (82), Expect = 0.13
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 804 PPEGLTEMEEEEEEEQDPGKPALPLSPEDLE--SLRSLQRQLLFRQLQKNSGWDTMGSES 861
PP G TE EEE+ PGK P P+D E S QRQ + +Q + G +G++
Sbjct: 181 PPSGTTE-----EEEEQPGKAPDPQDPQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKR 235
Query: 862 EGP 864
P
Sbjct: 236 PHP 238
>gi|224493912 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 36.2 bits (82), Expect = 0.13
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 804 PPEGLTEMEEEEEEEQDPGKPALPLSPEDLE--SLRSLQRQLLFRQLQKNSGWDTMGSES 861
PP G TE EEE+ PGK P P+D E S QRQ + +Q + G +G++
Sbjct: 317 PPSGTTE-----EEEEQPGKAPDPQDPQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKR 371
Query: 862 EGP 864
P
Sbjct: 372 PHP 374
>gi|222144283 hypothetical protein LOC65998 [Homo sapiens]
Length = 678
Score = 36.2 bits (82), Expect = 0.13
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 783 EEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSP 830
EEE+ + + + G + S P E E EE+EE+ Q+PG ALP P
Sbjct: 517 EEEEPEEEEEEWGDVPLSPGAPLERPAEEEEDEEDGQEPGGLALPPPP 564
>gi|226371704 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 36.2 bits (82), Expect = 0.13
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 804 PPEGLTEMEEEEEEEQDPGKPALPLSPEDLE--SLRSLQRQLLFRQLQKNSGWDTMGSES 861
PP G TE EEE+ PGK P P+D E S QRQ + +Q + G +G++
Sbjct: 317 PPSGTTE-----EEEEQPGKAPDPQDPQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKR 371
Query: 862 EGP 864
P
Sbjct: 372 PHP 374
>gi|224493905 zinc finger and SCAN domain containing 18 isoform 1
[Homo sapiens]
Length = 566
Score = 36.2 bits (82), Expect = 0.13
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 804 PPEGLTEMEEEEEEEQDPGKPALPLSPEDLE--SLRSLQRQLLFRQLQKNSGWDTMGSES 861
PP G TE EEE+ PGK P P+D E S QRQ + +Q + G +G++
Sbjct: 373 PPSGTTE-----EEEEQPGKAPDPQDPQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKR 427
Query: 862 EGP 864
P
Sbjct: 428 PHP 430
>gi|45827729 scribble isoform b [Homo sapiens]
Length = 1630
Score = 36.2 bits (82), Expect = 0.13
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 17/117 (14%)
Query: 723 PEDSPLGSSTP--MASPDLLPEDVREHLEGLMLSLFEQSLSC-QAQGGCSRPAMVLTDPH 779
PED+P TP ASP+ L R+ FE + QA+G R ++V D
Sbjct: 1333 PEDAPAQPPTPGPAASPEQLSFRERQ-------KYFELEVRVPQAEGPPKRVSLVGADDL 1385
Query: 780 TPYEEEQRQSVQSDQGYISRSSPQPP-------EGLTEMEEEEEEEQDPGKPALPLS 829
+EE+ + +Q + + R + + +G T EEE+E+EQ P P S
Sbjct: 1386 RKMQEEEARKLQQKRAQMLREAAEAGAEARLALDGETLGEEEQEDEQPPWASPSPTS 1442
>gi|45827731 scribble isoform a [Homo sapiens]
Length = 1655
Score = 36.2 bits (82), Expect = 0.13
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 17/117 (14%)
Query: 723 PEDSPLGSSTP--MASPDLLPEDVREHLEGLMLSLFEQSLSC-QAQGGCSRPAMVLTDPH 779
PED+P TP ASP+ L R+ FE + QA+G R ++V D
Sbjct: 1333 PEDAPAQPPTPGPAASPEQLSFRERQ-------KYFELEVRVPQAEGPPKRVSLVGADDL 1385
Query: 780 TPYEEEQRQSVQSDQGYISRSSPQPP-------EGLTEMEEEEEEEQDPGKPALPLS 829
+EE+ + +Q + + R + + +G T EEE+E+EQ P P S
Sbjct: 1386 RKMQEEEARKLQQKRAQMLREAAEAGAEARLALDGETLGEEEQEDEQPPWASPSPTS 1442
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 36.2 bits (82), Expect = 0.13
Identities = 54/183 (29%), Positives = 72/183 (39%), Gaps = 37/183 (20%)
Query: 652 PHLQPRG-QPAPQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGEAC-PLLGSP 709
P QPR +PAP V A EG EPG A AL+G+G+ P P
Sbjct: 1183 PEAQPRRLEPAPPRARPEV--APEG------EPGAPDSRAGGDTALSGDGDPPKPERKGP 1234
Query: 710 GAGRNSVLFLPVDPEDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFEQSLSCQAQGGCS 769
R LFL + P P G+S E ++ L L L+L +L+ G
Sbjct: 1235 EMPR---LFLDLGP---PQGNS----------EQIKARLSRLSLALPPLTLTPFPGPGPR 1278
Query: 770 RPAMVLTDPHTPYEEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQ--DPGKPALP 827
RP P+E + + G P +G E E+EEE+E+ PG A P
Sbjct: 1279 RP---------PWEGADAGAAGGEAGGAGAPGPAEEDGEDEDEDEEEDEEAAAPGAAAGP 1329
Query: 828 LSP 830
P
Sbjct: 1330 RGP 1332
>gi|21313638 leucine-rich repeat LGI family, member 2 [Homo sapiens]
Length = 545
Score = 36.2 bits (82), Expect = 0.13
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 26/124 (20%)
Query: 16 LGLLLLLLGV--LAPGGASLRLLDHRALVCSQPGLNCTVKNSTCLDDSWIHPRNLTPSSP 73
LGLLLLLLG L P A +R L CS CT ++ C+ SW+ PR + P
Sbjct: 11 LGLLLLLLGAACLIPRSAQVRRLARCPATCS-----CTKESIICVGSSWV-PR-IVP--- 60
Query: 74 KDLQIQLHFAHTQQGDLFPVAHIEWTLQTDASILYLEGAELSVLQLNTNERLCVRFEFLS 133
GD+ ++ + T ++ L +L LN+N +R + +
Sbjct: 61 --------------GDISSLSLVNGTFSEIKDRMFSHLPSLQLLLLNSNSFTIIRDDAFA 106
Query: 134 KLRH 137
L H
Sbjct: 107 GLFH 110
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 35.8 bits (81), Expect = 0.18
Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 5/133 (3%)
Query: 612 PPGTGIVKRAPLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQPAPQPLHTLVLA 671
PP + P +P + + A PL A+ A + P G P +L A
Sbjct: 156 PPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAA-SLCAA 214
Query: 672 AEEGALVAAVEP---GPLA-DGAAVRLALAGEGEACPLLGSPGAGRNSVLFLPVDPEDSP 727
++ A+ AA P PLA + AA A A AC + + PV +P
Sbjct: 215 SQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQPVSFPPAP 274
Query: 728 LGSSTPMASPDLL 740
+ + P + +LL
Sbjct: 275 VPCAVPPLAAELL 287
>gi|190684671 mitogen-activated protein kinase binding protein 1
isoform a [Homo sapiens]
Length = 1508
Score = 35.4 bits (80), Expect = 0.23
Identities = 57/243 (23%), Positives = 85/243 (34%), Gaps = 34/243 (13%)
Query: 621 APLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQPAPQ-------PLHTLVLAAE 673
AP +++P SQ LAI P + G + Q P PQ P +L+ E
Sbjct: 873 APSLQDP-SQDSLAIIPSGPRKHGQEALETSLTSQNEKPPRPQASQPCSYPHIIRLLSQE 931
Query: 674 EGALVAAVEPGPLADGAAV----------RLALAGEGEACPLLGSPGAGRNSVLFLPVDP 723
EG +EP P+ DG + A LG G S D
Sbjct: 932 EGVFAQDLEPAPIEDGIVYPEPSDNPTMDTSEFQVQAPARGTLGRVYPGSRSSEKHSPDS 991
Query: 724 EDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFEQSLSCQAQGGCSRPAMVLTDPHTPYE 783
S SS+ ++SP+ ED E E L + L A+G E
Sbjct: 992 ACSVDYSSSCLSSPEHPTED-SESTEPLSVDGISSDLEEPAEG--------------DEE 1036
Query: 784 EEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPEDLESLRSLQRQL 843
EE+ + G + SPQ P+ +++ E P P+ + RS+ +
Sbjct: 1037 EEEEEGGMGPYG-LQEGSPQTPDQEQFLKQHFETLASGAAPGAPVQVPERSESRSISSRF 1095
Query: 844 LFR 846
L +
Sbjct: 1096 LLQ 1098
>gi|190684677 mitogen-activated protein kinase binding protein 1
isoform b [Homo sapiens]
Length = 1514
Score = 35.4 bits (80), Expect = 0.23
Identities = 57/243 (23%), Positives = 85/243 (34%), Gaps = 34/243 (13%)
Query: 621 APLVREPGSQACLAIDPLVGEEGGAAVAKLEPHLQPRGQPAPQ-------PLHTLVLAAE 673
AP +++P SQ LAI P + G + Q P PQ P +L+ E
Sbjct: 879 APSLQDP-SQDSLAIIPSGPRKHGQEALETSLTSQNEKPPRPQASQPCSYPHIIRLLSQE 937
Query: 674 EGALVAAVEPGPLADGAAV----------RLALAGEGEACPLLGSPGAGRNSVLFLPVDP 723
EG +EP P+ DG + A LG G S D
Sbjct: 938 EGVFAQDLEPAPIEDGIVYPEPSDNPTMDTSEFQVQAPARGTLGRVYPGSRSSEKHSPDS 997
Query: 724 EDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFEQSLSCQAQGGCSRPAMVLTDPHTPYE 783
S SS+ ++SP+ ED E E L + L A+G E
Sbjct: 998 ACSVDYSSSCLSSPEHPTED-SESTEPLSVDGISSDLEEPAEG--------------DEE 1042
Query: 784 EEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPEDLESLRSLQRQL 843
EE+ + G + SPQ P+ +++ E P P+ + RS+ +
Sbjct: 1043 EEEEEGGMGPYG-LQEGSPQTPDQEQFLKQHFETLASGAAPGAPVQVPERSESRSISSRF 1101
Query: 844 LFR 846
L +
Sbjct: 1102 LLQ 1104
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 35.0 bits (79), Expect = 0.30
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 783 EEEQRQSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDP----GKPALPLSPEDLESLRS 838
+++Q+Q +Q Q + + QPP E EEE E E P + L ++LE +
Sbjct: 288 QQQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVELELMPVDLGSEQELEQQRQELERQQE 347
Query: 839 LQRQLLFRQLQ 849
L+RQ RQLQ
Sbjct: 348 LERQQEQRQLQ 358
>gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]
Length = 931
Score = 35.0 bits (79), Expect = 0.30
Identities = 60/233 (25%), Positives = 82/233 (35%), Gaps = 45/233 (19%)
Query: 635 IDPLVGEEGGAAVAKLEPHLQPRGQPAPQPLHTLVLAAEEGALVAAVEPGPL-ADGAAVR 693
IDP G +V + LQP +P P P L+L + +L+ V P L D
Sbjct: 609 IDPCAVAPGPPSVVVKQEALQPEPEPVPAP--QLLLGPQGPSLIKGVAPPTLITDSTGTH 666
Query: 694 LALAGEGEACPLLGSPGAGRNSVLFLPVDPEDSPLGSSTPMASPDLLPEDVREHLEGLML 753
L L + SPG S P P P GS P S + E + L G
Sbjct: 667 LVLTVTNKNA---DSPGLSSGS----PQQPSSQP-GSPAPAPSAQMDLEHPLQPLFGTPT 718
Query: 754 SL-------FEQSLSCQAQ----GGCSRPAMVLTD---------------PHTPYEEEQR 787
SL +E+++S Q + G S+ L D P P +E+
Sbjct: 719 SLLKKEPPGYEEAMSQQPKQQENGSSSQQMDDLFDILIQSGEISADFKEPPSLPGKEKPS 778
Query: 788 QSVQSDQGYISRSSPQPPEGLTEMEEEEEEEQDPGKPALPLSPED-LESLRSL 839
++ SP E + PG P+LP ED LES L
Sbjct: 779 PKTVCGSPLAAQPSP-------SAELPQAAPPPPGSPSLPGRLEDFLESSTGL 824
>gi|31982899 seven in absentia homolog 2 [Homo sapiens]
Length = 324
Score = 35.0 bits (79), Expect = 0.30
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 25/111 (22%)
Query: 659 QPAPQPLHTLVLAAEEGALVAAVEPGPLADGAAVRLALAGEGE-----ACPLLGSPGAGR 713
QP PQP HT P P A AA ++ AG G A ++ PG G
Sbjct: 18 QPPPQPQHT---------------PSPAAPPAAATISAAGPGSSAVPAAAAVISGPGGGG 62
Query: 714 NSVLFLPVDPEDSPLGS--STPMASPDLLPEDVREHLEGLMLSLFEQSLSC 762
+ PV P+ L S P+ +LP ++ L+ + Q LSC
Sbjct: 63 GAG---PVSPQHHELTSLFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSC 110
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 35.0 bits (79), Expect = 0.30
Identities = 52/231 (22%), Positives = 84/231 (36%), Gaps = 27/231 (11%)
Query: 644 GAAVAKLEPHLQPRGQPAPQPLHTLVLAAEEGALV----AAVEPGPLADGAAVRLA--LA 697
G VA L PR P TLV EE V AA +PG ++ G A + +
Sbjct: 145 GKTVANLLSGKSPRKSAEPSANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTS 204
Query: 698 GEGEACPLLGSPGAGRNSVLFLPVDPEDSPLGSSTPMASPDLLPEDVREHLEGLMLSLFE 757
+ + G P V V ++SP + P P V +
Sbjct: 205 SSSDETDVEGKPSVKPAQVKASSVSTKESPARKAAP------APGKVGD----------- 247
Query: 758 QSLSCQAQGGCSRPAMVLTDPHTPYEEEQRQSVQSDQGYI-SRSSPQPPEGLTEMEEEEE 816
++ Q +GG PA P E + S ++ +RS + E + ++
Sbjct: 248 --VTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQVKASEKILQVRAASA 305
Query: 817 EEQ-DPGKPALPLSPEDLESLRSLQRQLLFRQLQKNSGWDTMGSESEGPSA 866
+ PGK A P P ++ S + + ++S ++ SE E P+A
Sbjct: 306 PAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAA 356
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,419,733
Number of Sequences: 37866
Number of extensions: 2273581
Number of successful extensions: 11210
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 10512
Number of HSP's gapped (non-prelim): 798
length of query: 866
length of database: 18,247,518
effective HSP length: 111
effective length of query: 755
effective length of database: 14,044,392
effective search space: 10603515960
effective search space used: 10603515960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.