Guide to the Human Genome
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Name: ABHD11 Sequence: fasta or formatted (97aa) NCBI GI: 23200018
Description:

abhydrolase domain containing 11 isoform 5

Referenced in:

Additional Enzymes and Related Sequences

Other entries for this name:
alt prot [184aa] abhydrolase domain containing 11 7
alt prot [258aa] abhydrolase domain containing 11 isoform 8
alt prot [315aa] abhydrolase domain containing 11 isoform 1
alt prot [308aa] abhydrolase domain containing 11 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         11           2
 C cysteine            0.0          0           0
 D aspartate           1.0          1           1
 E glutamate           3.1          3           1
 F phenylalanine       4.1          4           1
 G glycine            13.4         13           2
 H histidine           2.1          2           1
 I isoleucine          2.1          2           1
 K lysine              2.1          2           1
 L leucine            12.4         12           2
 M methionine          2.1          2           1
 N asparagine          2.1          2           1
 P proline             9.3          9           1
 Q glutamine           4.1          4           2
 R arginine           11.3         11           2
 S serine              9.3          9           4
 T threonine           3.1          3           1
 V valine              4.1          4           2
 W tryptophan          2.1          2           1
 Y tyrosine            1.0          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   abhydrolase domain containing 11 isoform 5 
ABHD11                0.983   abhydrolase domain containing 11 isoform 1 
ABHD11                0.983   abhydrolase domain containing 11 isoform 8 
ABHD11                0.983   abhydrolase domain containing 11 7 
ABHD11                0.862   abhydrolase domain containing 11 isoform 2 
COL17A1               0.057   alpha 1 type XVII collagen 
RAVER1                0.040   RAVER1 
GNAS                  0.029   GNAS complex locus XLas 
HEATR5B               0.029   HEAT repeat containing 5B 
WBSCR16               0.029   Williams-Beuren syndrome chromosome region 16 
ZNF219                0.029   zinc finger protein 219 
ZNF219                0.029   zinc finger protein 219 
ZNF219                0.029   zinc finger protein 219 
COL1A2                0.023   alpha 2 type I collagen 
SFPQ                  0.023   splicing factor proline/glutamine rich (polypyrimidin...
GULP1                 0.023   GULP, engulfment adaptor PTB domain containing 1 [Hom...
PPP1R13L              0.017   protein phosphatase 1, regulatory subunit 13 like [...
PPP1R13L              0.017   protein phosphatase 1, regulatory subunit 13 like [H...
IRAK2                 0.017   interleukin-1 receptor-associated kinase 2 
WDR33                 0.017   WD repeat domain 33 isoform 1 
GNAS                  0.017   GNAS complex locus alex 
LOC100287930          0.017   PREDICTED: similar to Putative uncharacterized prot...
LOC100287930          0.017   PREDICTED: hypothetical protein XP_002342772 
LOC100287930          0.017   PREDICTED: similar to Putative uncharacterized prot...
PAX7                  0.017   paired box 7 isoform 1 
PAX7                  0.017   paired box 7 isoform 2 
PAX7                  0.017   paired box 7 isoform 3 
MLL2                  0.017   myeloid/lymphoid or mixed-lineage leukemia 2 
COLEC12               0.017   collectin sub-family member 12 
WDR81                 0.011   PREDICTED: WD repeat domain 81 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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