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Search of human proteins with 23111055
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23111055 sorting nexin 7 isoform b [Homo sapiens]
(336 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23111055 sorting nexin 7 isoform b [Homo sapiens] 675 0.0
gi|194294540 sorting nexin 7 isoform a [Homo sapiens] 651 0.0
gi|153791707 sorting nexin family member 30 [Homo sapiens] 319 2e-87
gi|23111034 sorting nexin 1 isoform a [Homo sapiens] 95 8e-20
gi|23111036 sorting nexin 1 isoform c [Homo sapiens] 94 2e-19
gi|23111038 sorting nexin 2 [Homo sapiens] 93 3e-19
gi|4507145 sorting nexin 4 [Homo sapiens] 93 3e-19
gi|23111032 sorting nexin 1 isoform b [Homo sapiens] 86 5e-17
gi|4507143 sorting nexin 3 isoform a [Homo sapiens] 74 2e-13
gi|23111030 sorting nexin 12 [Homo sapiens] 71 2e-12
gi|224177511 sorting nexin 18 isoform c [Homo sapiens] 67 2e-11
gi|157057545 sorting nexin 18 isoform a [Homo sapiens] 67 2e-11
gi|157057543 sorting nexin 18 isoform b [Homo sapiens] 67 2e-11
gi|23111026 sorting nexin 11 [Homo sapiens] 58 1e-08
gi|23111028 sorting nexin 11 [Homo sapiens] 58 1e-08
gi|23111047 sorting nexin 5 [Homo sapiens] 57 3e-08
gi|7657599 sorting nexin 5 [Homo sapiens] 57 3e-08
gi|23397574 sorting nexin 33 [Homo sapiens] 54 2e-07
gi|23943858 sorting nexin 8 [Homo sapiens] 50 2e-06
gi|88703041 sorting nexin 6 isoform b [Homo sapiens] 50 3e-06
gi|72534838 sorting nexin 6B [Homo sapiens] 50 3e-06
gi|23111023 sorting nexin 10 [Homo sapiens] 49 8e-06
gi|7706706 sorting nexin 9 [Homo sapiens] 45 7e-05
gi|24797143 sorting nexin 14 isoform b [Homo sapiens] 44 2e-04
gi|24797145 sorting nexin 14 isoform a [Homo sapiens] 44 2e-04
gi|23111041 sorting nexin 3 isoform b [Homo sapiens] 43 3e-04
gi|23238244 sorting nexin 16 isoform a [Homo sapiens] 43 5e-04
gi|23238246 sorting nexin 16 isoform a [Homo sapiens] 43 5e-04
gi|19923723 ribosomal protein S6 kinase, 52kDa, polypeptide 1 is... 42 8e-04
gi|157502171 sorting nexin 19 [Homo sapiens] 42 0.001
>gi|23111055 sorting nexin 7 isoform b [Homo sapiens]
Length = 336
Score = 675 bits (1741), Expect = 0.0
Identities = 336/336 (100%), Positives = 336/336 (100%)
Query: 1 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR 60
MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
Sbjct: 1 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR 60
Query: 61 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA 120
GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
Sbjct: 61 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA 120
Query: 121 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK 180
LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
Sbjct: 121 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK 180
Query: 181 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD 240
NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
Sbjct: 181 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD 240
Query: 241 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE 300
TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
Sbjct: 241 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE 300
Query: 301 VLTYKKADTDLCLATWESFLTSQTNLHLEEASEDKP 336
VLTYKKADTDLCLATWESFLTSQTNLHLEEASEDKP
Sbjct: 301 VLTYKKADTDLCLATWESFLTSQTNLHLEEASEDKP 336
>gi|194294540 sorting nexin 7 isoform a [Homo sapiens]
Length = 451
Score = 651 bits (1679), Expect = 0.0
Identities = 336/387 (86%), Positives = 336/387 (86%), Gaps = 51/387 (13%)
Query: 1 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR 60
MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
Sbjct: 65 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR 124
Query: 61 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA 120
GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
Sbjct: 125 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA 184
Query: 121 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK 180
LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
Sbjct: 185 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK 244
Query: 181 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD 240
NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
Sbjct: 245 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD 304
Query: 241 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE 300
TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
Sbjct: 305 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE 364
Query: 301 VLTYKKADTDL------------------------------------------------- 311
VLTYKKADTDL
Sbjct: 365 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY 424
Query: 312 --CLATWESFLTSQTNLHLEEASEDKP 336
CLATWESFLTSQTNLHLEEASEDKP
Sbjct: 425 EQCLATWESFLTSQTNLHLEEASEDKP 451
>gi|153791707 sorting nexin family member 30 [Homo sapiens]
Length = 437
Score = 319 bits (818), Expect = 2e-87
Identities = 152/300 (50%), Positives = 224/300 (74%), Gaps = 5/300 (1%)
Query: 11 PTSPLSMINQIKFEDEPD--LKDLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEF 68
P S S++N+++ +D+ D +DLF+ VD+P+ HV T+ET+ITYRI TK++R EFD E+
Sbjct: 68 PASSSSLLNRLQLDDDIDGETRDLFVIVDDPKKHVCTMETYITYRITTKSTRVEFDLPEY 127
Query: 69 EVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRI 128
VRRRYQDF WL+ KLEE+ PT +IPPLPEKF+VKG+V+RF+++F+ETRRKAL KFL RI
Sbjct: 128 SVRRRYQDFDWLRSKLEESQPTHLIPPLPEKFVVKGVVDRFSEEFVETRRKALDKFLKRI 187
Query: 129 ADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFME 188
DHP L+FNE F IFLTA+ +L+++KKQG LL+RMG++V+ V + ++ RP EF
Sbjct: 188 TDHPVLSFNEHFNIFLTAK--DLNAYKKQGIALLTRMGESVKHVTGGYK-LRTRPLEFAA 244
Query: 189 MNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASC 248
+ ++++ F+ K+ ID+I+QRI KEE EY E++EYGP++ WSA E +L + L+ V++C
Sbjct: 245 IGDYLDTFALKLGTIDRIAQRIIKEEIEYLVELREYGPVYSTWSALEGELAEPLEGVSAC 304
Query: 249 IDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKAD 308
I C A E+ ++E LPV+ EY+LYS+ + V+K+RDQ+QAE ++K+E + +K D
Sbjct: 305 IGNCSTALEELTDDMTEDFLPVLREYILYSDSMKSVLKKRDQVQAEYEAKLEAVALRKED 364
>gi|23111034 sorting nexin 1 isoform a [Homo sapiens]
Length = 522
Score = 95.1 bits (235), Expect = 8e-20
Identities = 73/334 (21%), Positives = 149/334 (44%), Gaps = 36/334 (10%)
Query: 12 TSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVR 71
+ P +++ E++ D DL + + +PE + ++ Y++ T+TS F S +F V+
Sbjct: 125 SKPQPTYEELEEEEQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVK 184
Query: 72 RRYQDFLWLKGKLEEAHPT--LIIPPLPEKFIV------KGMVERFNDDFIETRRKALHK 123
RR+ DFL L KL E H I+PP PEK ++ G + + +F+E RR AL +
Sbjct: 185 RRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALER 244
Query: 124 FLNRIADHPTLTFNEDFKIFLTAQAW--ELSSHKKQGPGLLSRMGQTVRAVASSMRGVKN 181
+L RI +HPT+ + D + FL + + + G GLL + AV+ +
Sbjct: 245 YLQRIVNHPTMLQDPDVREFLEKEELPRAVGTQTLSGAGLLKMFNKATDAVSKMTIKMNE 304
Query: 182 RPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEED--LV 239
F E +E Q++ + + + + +E ++ + +SE++ L
Sbjct: 305 SDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALS 364
Query: 240 DTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKV 299
L +A ++ + +++ + +++ L +E+L ++ ++A D ++
Sbjct: 365 RALSQLAEVEEKIEQLHQEQAN----------NDFFLLAELLSDYIRLLAIVRAAFDQRM 414
Query: 300 EVLTYKKADTDLCLATWESFLTSQTNLHLEEASE 333
+ TW+ + +Q L + +E
Sbjct: 415 K--------------TWQRWQDAQATLQKKREAE 434
>gi|23111036 sorting nexin 1 isoform c [Homo sapiens]
Length = 474
Score = 93.6 bits (231), Expect = 2e-19
Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 10/236 (4%)
Query: 12 TSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVR 71
+ P +++ E++ D DL + + +PE + ++ Y++ T+TS F S +F V+
Sbjct: 125 SKPQPTYEELEEEEQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVK 184
Query: 72 RRYQDFLWLKGKLEEAHPT--LIIPPLPEKFIV------KGMVERFNDDFIETRRKALHK 123
RR+ DFL L KL E H I+PP PEK ++ G + + +F+E RR AL +
Sbjct: 185 RRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALER 244
Query: 124 FLNRIADHPTLTFNEDFKIFLTAQAW--ELSSHKKQGPGLLSRMGQTVRAVASSMRGVKN 181
+L RI +HPT+ + D + FL + + + G GLL + AV+ +
Sbjct: 245 YLQRIVNHPTMLQDPDVREFLEKEELPRAVGTQTLSGAGLLKMFNKATDAVSKMTIKMNE 304
Query: 182 RPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEED 237
F E +E Q++ + + + + +E ++ + +SE++
Sbjct: 305 SDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDN 360
>gi|23111038 sorting nexin 2 [Homo sapiens]
Length = 519
Score = 93.2 bits (230), Expect = 3e-19
Identities = 76/308 (24%), Positives = 136/308 (44%), Gaps = 13/308 (4%)
Query: 20 QIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLW 79
+I+ E D+ D+ I V +PE + ++ YR+ TKTS F SEF V+RR+ DFL
Sbjct: 130 EIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLG 189
Query: 80 LKGKL--EEAHPTLIIPPLPEKFIV------KGMVERFNDDFIETRRKALHKFLNRIADH 131
L KL + H I+PP PEK IV G + + +F+E RR AL ++L R H
Sbjct: 190 LHSKLASKYLHVGYIVPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALERYLQRTVKH 249
Query: 132 PTLTFNEDFKIFLTAQAW--ELSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEM 189
PTL + D + FL + +++ G G+L + + AV + F E
Sbjct: 250 PTLLQDPDLRQFLESSELPRAVNTQALSGAGILRMVNKAADAVNKMTIKMNESDAWFEEK 309
Query: 190 NNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEED--LVDTLKDVAS 247
E Q++ + + + +E + + SE+ L L +A
Sbjct: 310 QQQFENLDQQLRKLHVSVEALVCHRKELSANTAAFAKSAAMLGNSEDHTALSRALSQLAE 369
Query: 248 CIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQI-QAELDSKVEVLTYKK 306
++ + +++ ++ +Y+ + GV R + Q D+++ +L ++
Sbjct: 370 VEEKIDQLHQEQAFADFYMFSELLSDYIRLIAAVKGVFDHRMKCWQKWEDAQITLLKKRE 429
Query: 307 ADTDLCLA 314
A+ + +A
Sbjct: 430 AEAKMMVA 437
>gi|4507145 sorting nexin 4 [Homo sapiens]
Length = 450
Score = 93.2 bits (230), Expect = 3e-19
Identities = 76/290 (26%), Positives = 138/290 (47%), Gaps = 17/290 (5%)
Query: 29 LKDLFITVDEPESH-----VTTIETFITYRIITKTSRGEFDSSEF--EVRRRYQDFLWLK 81
LK + I+V E E + ET+ Y I T++ S + RRY +F L+
Sbjct: 55 LKKIEISVSEAEKRTGRNAMNMQETYTAYLIETRSVEHTDGQSVLTDSLWRRYSEFELLR 114
Query: 82 GKLEEAHPTLIIPPLPEK---FIV-KGMVERFNDDFIETRRKALHKFLNRIADHPTLTFN 137
L +P +++PPLPEK F+ K + + DF+E RR L FL RIA HP L +
Sbjct: 115 SYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLRIASHPILCRD 174
Query: 138 EDFKIFLTAQA-WELSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELF 196
+ F +FLT + W+ + ++ G + ++A+ ++ R VKN + F ++ ++ +
Sbjct: 175 KIFYLFLTQEGNWKETVNE---TGFQLKADSRLKALNATFR-VKNPDKRFTDLKHYSDEL 230
Query: 197 SQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKAT 256
I+ + ++ R+ + YG + WSA E+++ D L+ +D +
Sbjct: 231 QSVISHLLRVRARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDVYASSI 290
Query: 257 EKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKK 306
+ + E + EY+ Y+E L V ++ + +Q +L+ + L KK
Sbjct: 291 DDILED-EEHYADQLKEYLFYAEALRAVCRKHELMQYDLEMAAQDLASKK 339
>gi|23111032 sorting nexin 1 isoform b [Homo sapiens]
Length = 457
Score = 85.9 bits (211), Expect = 5e-17
Identities = 74/337 (21%), Positives = 147/337 (43%), Gaps = 44/337 (13%)
Query: 9 MMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEF 68
++P + S N I E + + +DLF + ++ Y++ T+TS F S +F
Sbjct: 65 LLPINNGSKENGIHEEQDQEPQDLFAG--------DGMNAYVAYKVTTQTSLPLFRSKQF 116
Query: 69 EVRRRYQDFLWLKGKLEEAHPT--LIIPPLPEKFIV------KGMVERFNDDFIETRRKA 120
V+RR+ DFL L KL E H I+PP PEK ++ G + + +F+E RR A
Sbjct: 117 AVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAA 176
Query: 121 LHKFLNRIADHPTLTFNEDFKIFLTAQAW--ELSSHKKQGPGLLSRMGQTVRAVASSMRG 178
L ++L RI +HPT+ + D + FL + + + G GLL + AV+
Sbjct: 177 LERYLQRIVNHPTMLQDPDVREFLEKEELPRAVGTQTLSGAGLLKMFNKATDAVSKMTIK 236
Query: 179 VKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEED- 237
+ F E +E Q++ + + + + +E ++ + +SE++
Sbjct: 237 MNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNT 296
Query: 238 -LVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELD 296
L L +A ++ + +++ + +++ L +E+L ++ ++A D
Sbjct: 297 ALSRALSQLAEVEEKIEQLHQEQAN----------NDFFLLAELLSDYIRLLAIVRAAFD 346
Query: 297 SKVEVLTYKKADTDLCLATWESFLTSQTNLHLEEASE 333
+++ TW+ + +Q L + +E
Sbjct: 347 QRMK--------------TWQRWQDAQATLQKKREAE 369
>gi|4507143 sorting nexin 3 isoform a [Homo sapiens]
Length = 162
Score = 73.6 bits (179), Expect = 2e-13
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 27 PDLKDLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEE 86
P L I V P++ F TY I KT+ F E VRRRY DF WL+ +LE
Sbjct: 24 PPSNFLEIDVSNPQTVGVGRGRFTTYEIRVKTNLPIFKLKESTVRRRYSDFEWLRSELER 83
Query: 87 AHPTLIIPPLPEKFIVKGMVER-----FNDDFIETRRKALHKFLNRIADHPTLTFNEDFK 141
+++PPLP K ++ + R F+D+FIE R++ L +F+N++A HP
Sbjct: 84 -ESKVVVPPLPGKAFLRQLPFRGDDGIFDDNFIEERKQGLEQFINKVAGHPLAQNERCLH 142
Query: 142 IFL 144
+FL
Sbjct: 143 MFL 145
>gi|23111030 sorting nexin 12 [Homo sapiens]
Length = 162
Score = 70.9 bits (172), Expect = 2e-12
Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 27 PDLKDLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEE 86
P L I + P++ F TY + +T+ F E VRRRY DF WLK +LE
Sbjct: 25 PPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELER 84
Query: 87 AHPTLIIPPLPEKFIVKGMVER-----FNDDFIETRRKALHKFLNRIADHPTLTFNEDFK 141
+++PPLP K + + + R F + FIE RR+ L +F+N+IA HP
Sbjct: 85 -DSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLH 143
Query: 142 IFLTAQA 148
+FL +A
Sbjct: 144 MFLQEEA 150
>gi|224177511 sorting nexin 18 isoform c [Homo sapiens]
Length = 591
Score = 67.4 bits (163), Expect = 2e-11
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 35 TVDEP--ESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLI 92
T+D+P ++ ++++I+Y+++ ++ V RRY+ F WL +L E P +
Sbjct: 279 TIDDPTKQTKFKGMKSYISYKLVPT-------HTQVPVHRRYKHFDWLYARLAEKFPVIS 331
Query: 93 IPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTA------ 146
+P LPEK RF +DFI RRK L ++N +A HP L + F+ FLT
Sbjct: 332 VPHLPEK----QATGRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDE 387
Query: 147 QAWELSSHKKQ 157
+AW+ K +
Sbjct: 388 KAWKQGKRKAE 398
>gi|157057545 sorting nexin 18 isoform a [Homo sapiens]
Length = 624
Score = 67.4 bits (163), Expect = 2e-11
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 35 TVDEP--ESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLI 92
T+D+P ++ ++++I+Y+++ ++ V RRY+ F WL +L E P +
Sbjct: 279 TIDDPTKQTKFKGMKSYISYKLVPT-------HTQVPVHRRYKHFDWLYARLAEKFPVIS 331
Query: 93 IPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTA------ 146
+P LPEK RF +DFI RRK L ++N +A HP L + F+ FLT
Sbjct: 332 VPHLPEK----QATGRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDE 387
Query: 147 QAWELSSHKKQ 157
+AW+ K +
Sbjct: 388 KAWKQGKRKAE 398
>gi|157057543 sorting nexin 18 isoform b [Homo sapiens]
Length = 628
Score = 67.4 bits (163), Expect = 2e-11
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 35 TVDEP--ESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLI 92
T+D+P ++ ++++I+Y+++ ++ V RRY+ F WL +L E P +
Sbjct: 279 TIDDPTKQTKFKGMKSYISYKLVPT-------HTQVPVHRRYKHFDWLYARLAEKFPVIS 331
Query: 93 IPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTA------ 146
+P LPEK RF +DFI RRK L ++N +A HP L + F+ FLT
Sbjct: 332 VPHLPEK----QATGRFEEDFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCPSSTDE 387
Query: 147 QAWELSSHKKQ 157
+AW+ K +
Sbjct: 388 KAWKQGKRKAE 398
>gi|23111026 sorting nexin 11 [Homo sapiens]
Length = 270
Score = 58.2 bits (139), Expect = 1e-08
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 48 TFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVE 107
+++ Y+I T+ F + VRRRY++F+WL+ +L+ + +P LP K G
Sbjct: 34 SYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKSTFFGT-- 91
Query: 108 RFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQ 147
+D+FIE RR+ L FL ++ L + +FL +Q
Sbjct: 92 --SDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQ 129
>gi|23111028 sorting nexin 11 [Homo sapiens]
Length = 270
Score = 58.2 bits (139), Expect = 1e-08
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 48 TFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVE 107
+++ Y+I T+ F + VRRRY++F+WL+ +L+ + +P LP K G
Sbjct: 34 SYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKSTFFGT-- 91
Query: 108 RFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQ 147
+D+FIE RR+ L FL ++ L + +FL +Q
Sbjct: 92 --SDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQ 129
>gi|23111047 sorting nexin 5 [Homo sapiens]
Length = 404
Score = 56.6 bits (135), Expect = 3e-08
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 31/283 (10%)
Query: 50 ITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEA--HPTLIIPPLPEKFIVKGMVE 107
+ + + TKT+ F S EF V R+++DF+WL L E + LIIPP P K G E
Sbjct: 45 VKFTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTKPDFDGPRE 104
Query: 108 RF-----------NDDF------IETRRKALHK--------FLNRIADHPTLTFNEDFKI 142
+ ++F +E A+ K FL R++ HP L+ + +F +
Sbjct: 105 KMQKLGEGEGSMTKEEFAKMKQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHV 164
Query: 143 FLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSM--RGVKNRPEEFMEMNNFIELFSQKI 200
FL +LS +K + ++V A + GVK + F + NF+ + +I
Sbjct: 165 FLEYDQ-DLSVRRKNTKEMFGGFFKSVVKSADEVLFTGVKEVDDFFEQEKNFLINYYNRI 223
Query: 201 NLIDKISQRIYKEEREYFDE-MKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKR 259
+ ++ + + D+ + +H L + L VA ++ K +
Sbjct: 224 KDSCVKADKMTRSHKNVADDYIHTAACLHSLALEEPTVIKKYLLKVAELFEKLRKVEGRV 283
Query: 260 MSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVEVL 302
S L ++ Y+L E ++ RR + + ++ + L
Sbjct: 284 SSDEDLKLTELLRYYMLNIEAAKDLLYRRTKALIDYENSNKAL 326
>gi|7657599 sorting nexin 5 [Homo sapiens]
Length = 404
Score = 56.6 bits (135), Expect = 3e-08
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 31/283 (10%)
Query: 50 ITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEA--HPTLIIPPLPEKFIVKGMVE 107
+ + + TKT+ F S EF V R+++DF+WL L E + LIIPP P K G E
Sbjct: 45 VKFTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTKPDFDGPRE 104
Query: 108 RF-----------NDDF------IETRRKALHK--------FLNRIADHPTLTFNEDFKI 142
+ ++F +E A+ K FL R++ HP L+ + +F +
Sbjct: 105 KMQKLGEGEGSMTKEEFAKMKQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHV 164
Query: 143 FLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSM--RGVKNRPEEFMEMNNFIELFSQKI 200
FL +LS +K + ++V A + GVK + F + NF+ + +I
Sbjct: 165 FLEYDQ-DLSVRRKNTKEMFGGFFKSVVKSADEVLFTGVKEVDDFFEQEKNFLINYYNRI 223
Query: 201 NLIDKISQRIYKEEREYFDE-MKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKR 259
+ ++ + + D+ + +H L + L VA ++ K +
Sbjct: 224 KDSCVKADKMTRSHKNVADDYIHTAACLHSLALEEPTVIKKYLLKVAELFEKLRKVEGRV 283
Query: 260 MSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVEVL 302
S L ++ Y+L E ++ RR + + ++ + L
Sbjct: 284 SSDEDLKLTELLRYYMLNIEAAKDLLYRRTKALIDYENSNKAL 326
>gi|23397574 sorting nexin 33 [Homo sapiens]
Length = 574
Score = 53.9 bits (128), Expect = 2e-07
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Query: 35 TVDEP--ESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLI 92
+V++P ++ I+++I+Y++ T T V RRY+ F WL +L +
Sbjct: 233 SVEDPTKQTKFKGIKSYISYKL-TPTHAAS------PVYRRYKHFDWLYNRLLHKFTVIS 285
Query: 93 IPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTA---QAW 149
+P LPEK RF +DFIE R++ L +++ + HP L+ E F+ FL+ + W
Sbjct: 286 VPHLPEK----QATGRFEEDFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLSCLDDKQW 341
Query: 150 ELSSHKKQ 157
++ + +
Sbjct: 342 KMGKRRAE 349
>gi|23943858 sorting nexin 8 [Homo sapiens]
Length = 465
Score = 50.4 bits (119), Expect = 2e-06
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 62 EFDSSEFE--VRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRK 119
E S F+ V RRY DF+ + L P ++P LP K ++ + +FIE RR+
Sbjct: 96 EVSSQRFKSSVYRRYNDFVVFQEMLLHKFPYRMVPALPPKRMLGA-----DREFIEARRR 150
Query: 120 ALHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQ 157
AL +F+N +A HP + + K+FL+ ++ + K+
Sbjct: 151 ALKRFVNLVARHPLFSEDVVLKLFLSFSGSDVQNKLKE 188
>gi|88703041 sorting nexin 6 isoform b [Homo sapiens]
Length = 418
Score = 50.1 bits (118), Expect = 3e-06
Identities = 59/288 (20%), Positives = 118/288 (40%), Gaps = 31/288 (10%)
Query: 50 ITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKL--EEAHPTLIIPPLP---------E 98
+ + + TK+S F +EF V R++++F+WL E + IIPP P E
Sbjct: 58 VKFTVHTKSSLPNFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASRE 117
Query: 99 KF--IVKGMVERFNDDFIETRRK-------------ALHK-FLNRIADHPTLTFNEDFKI 142
K + +G ++F + +++ A+H+ FL R+A HP L + +F +
Sbjct: 118 KLQKLGEGEGSMTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRDLNFHV 177
Query: 143 FLTAQAWELSSHKKQGPGLLSRMGQTVRAVASS--MRGVKNRPEEFMEMNNFIELFSQKI 200
FL +LS K L + + A + GVK+ + F F+ + ++
Sbjct: 178 FLEYNQ-DLSVRGKNKKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRV 236
Query: 201 NLIDKISQRIYKEEREYFDEMKEYG-PIHILWSASEEDLVDTLKDVASCIDRCCKATEKR 259
S R+ + + D+ G ++ L + D+ V+ D+ K +
Sbjct: 237 KDASAKSDRMTRSHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARV 296
Query: 260 MSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKA 307
+ L ++ Y+ S+ ++ RR + + ++ + L +A
Sbjct: 297 SADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARA 344
>gi|72534838 sorting nexin 6B [Homo sapiens]
Length = 403
Score = 50.1 bits (118), Expect = 3e-06
Identities = 63/289 (21%), Positives = 121/289 (41%), Gaps = 40/289 (13%)
Query: 50 ITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKL--EEAHPTLIIPPLPEKFIVKGMVE 107
+ + + TK+ F +EF V R++++F+WL E + LIIPP P + + E
Sbjct: 40 VKFTVQTKSCLPHFAQTEFSVVRQHEEFIWLHDAYVENEEYAGLIIPPAPPRPDFEASRE 99
Query: 108 RF-----------NDDFIETRRK-------------ALHK-FLNRIADHPTLTFNEDFKI 142
+ ++F + +++ A+H+ FL R+A HPTL + +F +
Sbjct: 100 KLQKLGEGDSSVTREEFAKMKQELEAEYLAIFKKTVAMHEVFLQRLAAHPTLRRDHNFFV 159
Query: 143 FLTAQAWELSSHKKQGPGLLSRMGQTV-----RAVASSMRGVKNRPEEFMEMNNFIELFS 197
FL +LS K LL + + A+ + M G+K + F F+ +
Sbjct: 160 FL-EYGQDLSVRGKNRKELLGGFLRNIVKSADEALITGMSGLKEVDDFFEHERTFLLEYH 218
Query: 198 QKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVDTLK----DVASCIDRCC 253
+I + R+ + + D +Y PI S+ V+ L+ +A +R
Sbjct: 219 TRIRDACLRADRVMRAHKCLAD---DYIPISAALSSLGTQEVNQLRTSFLKLAELFERLR 275
Query: 254 KATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVEVL 302
K + S L ++ Y+ S+ ++ RR + A+ ++ + L
Sbjct: 276 KLEGRVASDEDLKLSDMLRYYMRDSQAAKDLLYRRLRALADYENANKAL 324
>gi|23111023 sorting nexin 10 [Homo sapiens]
Length = 201
Score = 48.5 bits (114), Expect = 8e-06
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 48 TFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVE 107
++I Y I T+ F VRRRY++F+WL+ +L+ + +P LP K + M
Sbjct: 28 SYIDYEICIHTNSMCFTMKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKNLFFNMNN 87
Query: 108 RFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFL 144
R ++ RR+ L FL ++ + L + +FL
Sbjct: 88 R---QHVDQRRQGLEDFLRKVLQNALLLSDSSLHLFL 121
>gi|7706706 sorting nexin 9 [Homo sapiens]
Length = 595
Score = 45.4 bits (106), Expect = 7e-05
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 17/117 (14%)
Query: 46 IETFITYRII-TKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLI-IPPLPEKFIVK 103
++++I Y++ T T+R V RY+ F WL +L + I IP LP+K +
Sbjct: 266 LKSYIEYQLTPTNTNRS--------VNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTG 317
Query: 104 GMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLT---AQAWELSSHKKQ 157
RF ++FI+ R + L ++ R+ HP ++ +E F+ FL + W+ K +
Sbjct: 318 ----RFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAE 370
>gi|24797143 sorting nexin 14 isoform b [Homo sapiens]
Length = 893
Score = 44.3 bits (103), Expect = 2e-04
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 64 DSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKALHK 123
+ + V RRY +F L+ KL E H LP K I+ N +F++++R+ +
Sbjct: 554 EPEHWSVYRRYLEFYVLESKLTEFHGAFPDAQLPSKRIIGPK----NYEFLKSKREEFQE 609
Query: 124 FLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRP 183
+L ++ HP L+ ++ FL+ E K P + +G+ +++V + K +
Sbjct: 610 YLQKLLQHPELSNSQLLADFLSPNGGETQFLDKILPDV--NLGKIIKSVPGKLMKEKGQH 667
Query: 184 EEFMEMN 190
E MN
Sbjct: 668 LEPFIMN 674
>gi|24797145 sorting nexin 14 isoform a [Homo sapiens]
Length = 946
Score = 44.3 bits (103), Expect = 2e-04
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 64 DSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKALHK 123
+ + V RRY +F L+ KL E H LP K I+ N +F++++R+ +
Sbjct: 607 EPEHWSVYRRYLEFYVLESKLTEFHGAFPDAQLPSKRIIGPK----NYEFLKSKREEFQE 662
Query: 124 FLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRP 183
+L ++ HP L+ ++ FL+ E K P + +G+ +++V + K +
Sbjct: 663 YLQKLLQHPELSNSQLLADFLSPNGGETQFLDKILPDV--NLGKIIKSVPGKLMKEKGQH 720
Query: 184 EEFMEMN 190
E MN
Sbjct: 721 LEPFIMN 727
>gi|23111041 sorting nexin 3 isoform b [Homo sapiens]
Length = 130
Score = 43.1 bits (100), Expect = 3e-04
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 86 EAHPTLIIPPLPEKFIVKGMVER-----FNDDFIETRRKALHKFLNRIADHPTLTFNEDF 140
E +++PPLP K ++ + R F+D+FIE R++ L +F+N++A HP
Sbjct: 50 EIRVKVVVPPLPGKAFLRQLPFRGDDGIFDDNFIEERKQGLEQFINKVAGHPLAQNERCL 109
Query: 141 KIFL 144
+FL
Sbjct: 110 HMFL 113
>gi|23238244 sorting nexin 16 isoform a [Homo sapiens]
Length = 344
Score = 42.7 bits (99), Expect = 5e-04
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 33/229 (14%)
Query: 49 FITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHP--TLIIPPLPEKFIVKGMV 106
F Y+I+ K + E + V RRY DF L KL+E P L +PP +
Sbjct: 124 FTVYKILVKKTPEE----SWVVFRRYTDFSRLNDKLKEMFPGFRLALPP------KRWFK 173
Query: 107 ERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMG 166
+ +N DF+E R+ L FL + H + + FL PG +
Sbjct: 174 DNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLD---------DPPGPFDSLE 224
Query: 167 QTVRAVASSM-----RGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYK---EEREYF 218
++ RA ++ R K E+ EM + +L S+K ID + RI E E
Sbjct: 225 ES-RAFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESL 283
Query: 219 DEMKEYGP--IHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSE 265
D + G + + SA E D D L + + ++ C + + + +SE
Sbjct: 284 DVSETEGEQILKVESSALEVD-QDVLDEESRADNKPCLSFSEPENAVSE 331
>gi|23238246 sorting nexin 16 isoform a [Homo sapiens]
Length = 344
Score = 42.7 bits (99), Expect = 5e-04
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 33/229 (14%)
Query: 49 FITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHP--TLIIPPLPEKFIVKGMV 106
F Y+I+ K + E + V RRY DF L KL+E P L +PP +
Sbjct: 124 FTVYKILVKKTPEE----SWVVFRRYTDFSRLNDKLKEMFPGFRLALPP------KRWFK 173
Query: 107 ERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMG 166
+ +N DF+E R+ L FL + H + + FL PG +
Sbjct: 174 DNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLD---------DPPGPFDSLE 224
Query: 167 QTVRAVASSM-----RGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYK---EEREYF 218
++ RA ++ R K E+ EM + +L S+K ID + RI E E
Sbjct: 225 ES-RAFCETLEETNYRLQKELLEKQKEMESLKKLLSEKQLHIDTLENRIRTLSLEPEESL 283
Query: 219 DEMKEYGP--IHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSE 265
D + G + + SA E D D L + + ++ C + + + +SE
Sbjct: 284 DVSETEGEQILKVESSALEVD-QDVLDEESRADNKPCLSFSEPENAVSE 331
>gi|19923723 ribosomal protein S6 kinase, 52kDa, polypeptide 1
isoform a [Homo sapiens]
Length = 1066
Score = 42.0 bits (97), Expect = 8e-04
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 33 FITVDEPESHVTTIETF-ITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTL 91
F TV EP+ H + +T R++++ R D E V +RY DF L +L + H L
Sbjct: 14 FYTVTEPQRHPRGYTVYKVTARVVSR--RNPEDVQEIIVWKRYSDFKKLHKELWQIHKNL 71
Query: 92 -----IIPPLPEKFIVKGMV-ERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIF 143
+ PP KG+V RF++ IE RR+ L A+ P L ++ + F
Sbjct: 72 FRHSELFPP-----FAKGIVFGRFDETVIEERRQCAEDLLQFSANIPALYNSKQLEDF 124
>gi|157502171 sorting nexin 19 [Homo sapiens]
Length = 992
Score = 41.6 bits (96), Expect = 0.001
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 40/215 (18%)
Query: 2 DMNSFSPMMP-----TSPLSMINQIKFEDEP--------DLKDLFIT--VDEPESHVTTI 46
D++S P +P +SP ++ F EP +++L IT + E T
Sbjct: 490 DVSSLDPTLPPVLLSSSPPGPLSSATFSFEPLSSPDGPVIIQNLRITGTITAREHSGTGF 549
Query: 47 ETFITYRIITKTSRGEFDSSEFE------VRRRYQDFLWLKGKLEEAHPTLIIPPLPEKF 100
+ Y + +T+ +SS + V RRY++FL L+ +LEE P KF
Sbjct: 550 HPYTLYTVKYETALDGENSSGLQQLAYHTVNRRYREFLNLQTRLEE-------KPDLRKF 602
Query: 101 I--VKGMVERFND--------DFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE 150
I VKG + F D D +E R+ L FL ++ P + +E+ + FL
Sbjct: 603 IKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFLKQLCAIPEIANSEEVQEFLALNTDA 662
Query: 151 LSSHKKQGPGLLSRMGQ-TVRAVASSMRGVKNRPE 184
+ K+ P ++SR+ + V A+ +++ R E
Sbjct: 663 RIAFVKK-PFMVSRIDKMVVSAIVDTLKTAFPRSE 696
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,171,388
Number of Sequences: 37866
Number of extensions: 499858
Number of successful extensions: 1495
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1424
Number of HSP's gapped (non-prelim): 62
length of query: 336
length of database: 18,247,518
effective HSP length: 103
effective length of query: 233
effective length of database: 14,347,320
effective search space: 3342925560
effective search space used: 3342925560
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.