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Search of human proteins with 229576906
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|229576906 F-box and WD repeat domain containing 12 isoform 3
[Homo sapiens]
(445 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|229576906 F-box and WD repeat domain containing 12 isoform 3 ... 933 0.0
gi|229576873 F-box and WD repeat domain containing 12 isoform 1 ... 911 0.0
gi|229576894 F-box and WD repeat domain containing 12 isoform 2 ... 692 0.0
gi|206597470 neural precursor cell expressed, developmentally do... 41 0.003
gi|206597468 neural precursor cell expressed, developmentally do... 41 0.003
gi|23097254 neural precursor cell expressed, developmentally dow... 41 0.003
gi|206597465 neural precursor cell expressed, developmentally do... 41 0.003
gi|4506399 RAE1 (RNA export 1, S.pombe) homolog [Homo sapiens] 37 0.036
gi|62739173 RAE1 (RNA export 1, S.pombe) homolog [Homo sapiens] 37 0.036
gi|34485720 echinoderm microtubule associated protein like 5 [Ho... 34 0.31
gi|21536371 telomerase-associated protein 1 [Homo sapiens] 32 1.2
gi|59938780 WD repeat domain 31 isoform 1 [Homo sapiens] 32 1.5
gi|21687048 WD repeat domain 31 isoform 3 [Homo sapiens] 32 1.5
gi|38569484 kinesin family member 21A [Homo sapiens] 31 2.0
gi|9951915 adenosylhomocysteinase isoform 1 [Homo sapiens] 31 2.6
gi|239937451 adenosylhomocysteinase isoform 2 [Homo sapiens] 31 2.6
gi|118402582 cell division cycle 20 [Homo sapiens] 30 3.4
gi|39812106 tumor differentially expressed protein 1 [Homo sapiens] 30 3.4
gi|5803193 tumor differentially expressed protein 1 [Homo sapiens] 30 3.4
gi|16554629 WD repeat domain 5 [Homo sapiens] 30 4.4
gi|16554627 WD repeat domain 5 [Homo sapiens] 30 4.4
gi|10834992 interleukin 13 receptor, alpha 2 precursor [Homo sap... 30 4.4
gi|223029510 echinoderm microtubule associated protein like 4 is... 30 4.4
gi|19923497 echinoderm microtubule associated protein like 4 iso... 30 4.4
gi|221219050 transducin-like enhancer protein 2 isoform 3 [Homo ... 30 4.4
gi|221219048 transducin-like enhancer protein 2 isoform 2 [Homo ... 30 4.4
gi|21361151 transducin-like enhancer protein 2 isoform 1 [Homo s... 30 4.4
gi|4557741 platelet-activating factor acetylhydrolase, isoform I... 30 5.8
gi|34915994 transducin-like enhancer protein 4 [Homo sapiens] 30 5.8
gi|221219020 NYD-SP11 protein [Homo sapiens] 29 7.5
>gi|229576906 F-box and WD repeat domain containing 12 isoform 3
[Homo sapiens]
Length = 445
Score = 933 bits (2411), Expect = 0.0
Identities = 445/445 (100%), Positives = 445/445 (100%)
Query: 1 MSPTHQIQDPKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHTWKQFFLHQRRKELRL 60
MSPTHQIQDPKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHTWKQFFLHQRRKELRL
Sbjct: 1 MSPTHQIQDPKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHTWKQFFLHQRRKELRL 60
Query: 61 ALAQPHNFIYKVTKNIAFETELAYLSGNRLTVDEQEKSIICSVSPKQELCAWDVQEGTMI 120
ALAQPHNFIYKVTKNIAFETELAYLSGNRLTVDEQEKSIICSVSPKQELCAWDVQEGTMI
Sbjct: 61 ALAQPHNFIYKVTKNIAFETELAYLSGNRLTVDEQEKSIICSVSPKQELCAWDVQEGTMI 120
Query: 121 WSSPVQEFHFSNLVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPMPQPCYCMEAYLTK 180
WSSPVQEFHFSNLVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPMPQPCYCMEAYLTK
Sbjct: 121 WSSPVQEFHFSNLVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPMPQPCYCMEAYLTK 180
Query: 181 DGPFLMVGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQV 240
DGPFLMVGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQV
Sbjct: 181 DGPFLMVGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQV 240
Query: 241 FLTESLLRPSEGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTEFITFDLTTK 300
FLTESLLRPSEGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTEFITFDLTTK
Sbjct: 241 FLTESLLRPSEGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTEFITFDLTTK 300
Query: 301 KTGGQTVIQAYEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDH 360
KTGGQTVIQAYEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDH
Sbjct: 301 KTGGQTVIQAYEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDH 360
Query: 361 QAAINNFWVDPCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTTDSCISSVMC 420
QAAINNFWVDPCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTTDSCISSVMC
Sbjct: 361 QAAINNFWVDPCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTTDSCISSVMC 420
Query: 421 DNASIVLRVRKVSDSSILVMYSLNT 445
DNASIVLRVRKVSDSSILVMYSLNT
Sbjct: 421 DNASIVLRVRKVSDSSILVMYSLNT 445
>gi|229576873 F-box and WD repeat domain containing 12 isoform 1
[Homo sapiens]
Length = 464
Score = 911 bits (2355), Expect = 0.0
Identities = 435/435 (100%), Positives = 435/435 (100%)
Query: 11 KHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHTWKQFFLHQRRKELRLALAQPHNFIY 70
KHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHTWKQFFLHQRRKELRLALAQPHNFIY
Sbjct: 30 KHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHTWKQFFLHQRRKELRLALAQPHNFIY 89
Query: 71 KVTKNIAFETELAYLSGNRLTVDEQEKSIICSVSPKQELCAWDVQEGTMIWSSPVQEFHF 130
KVTKNIAFETELAYLSGNRLTVDEQEKSIICSVSPKQELCAWDVQEGTMIWSSPVQEFHF
Sbjct: 90 KVTKNIAFETELAYLSGNRLTVDEQEKSIICSVSPKQELCAWDVQEGTMIWSSPVQEFHF 149
Query: 131 SNLVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPMPQPCYCMEAYLTKDGPFLMVGDA 190
SNLVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPMPQPCYCMEAYLTKDGPFLMVGDA
Sbjct: 150 SNLVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPMPQPCYCMEAYLTKDGPFLMVGDA 209
Query: 191 AGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRPS 250
AGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRPS
Sbjct: 210 AGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRPS 269
Query: 251 EGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTEFITFDLTTKKTGGQTVIQA 310
EGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTEFITFDLTTKKTGGQTVIQA
Sbjct: 270 EGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTEFITFDLTTKKTGGQTVIQA 329
Query: 311 YEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINNFWVD 370
YEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINNFWVD
Sbjct: 330 YEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINNFWVD 389
Query: 371 PCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTTDSCISSVMCDNASIVLRVR 430
PCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTTDSCISSVMCDNASIVLRVR
Sbjct: 390 PCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTTDSCISSVMCDNASIVLRVR 449
Query: 431 KVSDSSILVMYSLNT 445
KVSDSSILVMYSLNT
Sbjct: 450 KVSDSSILVMYSLNT 464
>gi|229576894 F-box and WD repeat domain containing 12 isoform 2
[Homo sapiens]
Length = 394
Score = 692 bits (1787), Expect = 0.0
Identities = 353/436 (80%), Positives = 358/436 (82%), Gaps = 72/436 (16%)
Query: 11 KHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHTWKQFFLHQRRKELRLALAQPHNFIY 70
KHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHTWKQFFLHQRRKELRLALAQPHNFIY
Sbjct: 30 KHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTHTWKQFFLHQRRKELRLALAQPHNFIY 89
Query: 71 KVTKNIAFETELAYLSGNRLTVDEQEKSIICSVSPKQELCAWDVQEGTMIWS-SPVQEFH 129
KVTKNIAFETELAYLSGNRLTVDE QE ++I S SP QE
Sbjct: 90 KVTKNIAFETELAYLSGNRLTVDE--------------------QEKSIICSVSPKQE-- 127
Query: 130 FSNLVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPMPQPCYCMEAYLTKDGPFLMVGD 189
+ W+ Q+ VGD
Sbjct: 128 ---------------------LCAWDVQE----------------------------VGD 138
Query: 190 AAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRP 249
AAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRP
Sbjct: 139 AAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRP 198
Query: 250 SEGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTEFITFDLTTKKTGGQTVIQ 309
SEGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTEFITFDLTTKKTGGQTVIQ
Sbjct: 199 SEGSVPLSTFLPHKLCASACWTPKVKNRITLMSQSSTGKKTEFITFDLTTKKTGGQTVIQ 258
Query: 310 AYEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINNFWV 369
AYEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINNFWV
Sbjct: 259 AYEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINNFWV 318
Query: 370 DPCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTTDSCISSVMCDNASIVLRV 429
DPCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTTDSCISSVMCDNASIVLRV
Sbjct: 319 DPCYVLTTSENSVHVYMWEEGGRHPYLRSCCHLENTWHDHTTDSCISSVMCDNASIVLRV 378
Query: 430 RKVSDSSILVMYSLNT 445
RKVSDSSILVMYSLNT
Sbjct: 379 RKVSDSSILVMYSLNT 394
>gi|206597470 neural precursor cell expressed, developmentally
down-regulated 1 isoform c [Homo sapiens]
Length = 571
Score = 40.8 bits (94), Expect = 0.003
Identities = 54/240 (22%), Positives = 93/240 (38%), Gaps = 37/240 (15%)
Query: 96 EKSIICSVSPKQELCAWDVQEGT------MIWSSPVQEFHFSNLVTLPQMHLAITMDRKK 149
+KS++ SVS + WDV + + +P FS + L L +T+ K
Sbjct: 85 KKSLLGSVSDNGIVTLWDVNSQSPYHNFDSVHKAPASGICFSPVNEL----LFVTIGLDK 140
Query: 150 TIKVWNCQDRDALAVLPMPQPCYCMEAYLTKDGPFLMVGDAAGDIYTFTLPGLRDVSKVT 209
I +++ + + L P ++ DG L +G + G IY + L L+ K
Sbjct: 141 RIILYDTSSKKLVKTLVADTPLTAVD--FMPDGATLAIGSSRGKIYQYDLRMLKSPVKTI 198
Query: 210 ----------AFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRPS-----EGSV 254
AFQY VL S +K T ++ V ++ S +
Sbjct: 199 SAHKTSVQCIAFQYSTVLTKSSLNKGCSNKPTTVNKRSVNVNAASGGVQNSGIVREAPAT 258
Query: 255 PLSTFLPHKLCASA----------CWTPKVKNRITLMSQSSTGKKTEFITFDLTTKKTGG 304
++T LP + ++ P+ N TL ++ +GK +F +FD T K + G
Sbjct: 259 SIATVLPQPMTSAMGKGTVAVQEKAGLPRSINTDTLSKETDSGKNQDFSSFDDTGKSSLG 318
>gi|206597468 neural precursor cell expressed, developmentally
down-regulated 1 isoform b [Homo sapiens]
Length = 660
Score = 40.8 bits (94), Expect = 0.003
Identities = 54/240 (22%), Positives = 93/240 (38%), Gaps = 37/240 (15%)
Query: 96 EKSIICSVSPKQELCAWDVQEGT------MIWSSPVQEFHFSNLVTLPQMHLAITMDRKK 149
+KS++ SVS + WDV + + +P FS + L L +T+ K
Sbjct: 174 KKSLLGSVSDNGIVTLWDVNSQSPYHNFDSVHKAPASGICFSPVNEL----LFVTIGLDK 229
Query: 150 TIKVWNCQDRDALAVLPMPQPCYCMEAYLTKDGPFLMVGDAAGDIYTFTLPGLRDVSKVT 209
I +++ + + L P ++ DG L +G + G IY + L L+ K
Sbjct: 230 RIILYDTSSKKLVKTLVADTPLTAVD--FMPDGATLAIGSSRGKIYQYDLRMLKSPVKTI 287
Query: 210 ----------AFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRPS-----EGSV 254
AFQY VL S +K T ++ V ++ S +
Sbjct: 288 SAHKTSVQCIAFQYSTVLTKSSLNKGCSNKPTTVNKRSVNVNAASGGVQNSGIVREAPAT 347
Query: 255 PLSTFLPHKLCASA----------CWTPKVKNRITLMSQSSTGKKTEFITFDLTTKKTGG 304
++T LP + ++ P+ N TL ++ +GK +F +FD T K + G
Sbjct: 348 SIATVLPQPMTSAMGKGTVAVQEKAGLPRSINTDTLSKETDSGKNQDFSSFDDTGKSSLG 407
>gi|23097254 neural precursor cell expressed, developmentally
down-regulated 1 isoform b [Homo sapiens]
Length = 660
Score = 40.8 bits (94), Expect = 0.003
Identities = 54/240 (22%), Positives = 93/240 (38%), Gaps = 37/240 (15%)
Query: 96 EKSIICSVSPKQELCAWDVQEGT------MIWSSPVQEFHFSNLVTLPQMHLAITMDRKK 149
+KS++ SVS + WDV + + +P FS + L L +T+ K
Sbjct: 174 KKSLLGSVSDNGIVTLWDVNSQSPYHNFDSVHKAPASGICFSPVNEL----LFVTIGLDK 229
Query: 150 TIKVWNCQDRDALAVLPMPQPCYCMEAYLTKDGPFLMVGDAAGDIYTFTLPGLRDVSKVT 209
I +++ + + L P ++ DG L +G + G IY + L L+ K
Sbjct: 230 RIILYDTSSKKLVKTLVADTPLTAVD--FMPDGATLAIGSSRGKIYQYDLRMLKSPVKTI 287
Query: 210 ----------AFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRPS-----EGSV 254
AFQY VL S +K T ++ V ++ S +
Sbjct: 288 SAHKTSVQCIAFQYSTVLTKSSLNKGCSNKPTTVNKRSVNVNAASGGVQNSGIVREAPAT 347
Query: 255 PLSTFLPHKLCASA----------CWTPKVKNRITLMSQSSTGKKTEFITFDLTTKKTGG 304
++T LP + ++ P+ N TL ++ +GK +F +FD T K + G
Sbjct: 348 SIATVLPQPMTSAMGKGTVAVQEKAGLPRSINTDTLSKETDSGKNQDFSSFDDTGKSSLG 407
>gi|206597465 neural precursor cell expressed, developmentally
down-regulated 1 isoform a [Homo sapiens]
Length = 667
Score = 40.8 bits (94), Expect = 0.003
Identities = 54/240 (22%), Positives = 93/240 (38%), Gaps = 37/240 (15%)
Query: 96 EKSIICSVSPKQELCAWDVQEGT------MIWSSPVQEFHFSNLVTLPQMHLAITMDRKK 149
+KS++ SVS + WDV + + +P FS + L L +T+ K
Sbjct: 181 KKSLLGSVSDNGIVTLWDVNSQSPYHNFDSVHKAPASGICFSPVNEL----LFVTIGLDK 236
Query: 150 TIKVWNCQDRDALAVLPMPQPCYCMEAYLTKDGPFLMVGDAAGDIYTFTLPGLRDVSKVT 209
I +++ + + L P ++ DG L +G + G IY + L L+ K
Sbjct: 237 RIILYDTSSKKLVKTLVADTPLTAVD--FMPDGATLAIGSSRGKIYQYDLRMLKSPVKTI 294
Query: 210 ----------AFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRPS-----EGSV 254
AFQY VL S +K T ++ V ++ S +
Sbjct: 295 SAHKTSVQCIAFQYSTVLTKSSLNKGCSNKPTTVNKRSVNVNAASGGVQNSGIVREAPAT 354
Query: 255 PLSTFLPHKLCASA----------CWTPKVKNRITLMSQSSTGKKTEFITFDLTTKKTGG 304
++T LP + ++ P+ N TL ++ +GK +F +FD T K + G
Sbjct: 355 SIATVLPQPMTSAMGKGTVAVQEKAGLPRSINTDTLSKETDSGKNQDFSSFDDTGKSSLG 414
>gi|4506399 RAE1 (RNA export 1, S.pombe) homolog [Homo sapiens]
Length = 368
Score = 37.0 bits (84), Expect = 0.036
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 112 WDVQEGTMIW----SSPVQEFHFSNLVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPM 167
WD+ I +PV+ H+ + P +T KT+K W+ + + + VL +
Sbjct: 113 WDLSSNQAIQIAQHDAPVKTIHW---IKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQL 169
Query: 168 PQPCYCME 175
P+ CYC +
Sbjct: 170 PERCYCAD 177
>gi|62739173 RAE1 (RNA export 1, S.pombe) homolog [Homo sapiens]
Length = 368
Score = 37.0 bits (84), Expect = 0.036
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 112 WDVQEGTMIW----SSPVQEFHFSNLVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPM 167
WD+ I +PV+ H+ + P +T KT+K W+ + + + VL +
Sbjct: 113 WDLSSNQAIQIAQHDAPVKTIHW---IKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQL 169
Query: 168 PQPCYCME 175
P+ CYC +
Sbjct: 170 PERCYCAD 177
>gi|34485720 echinoderm microtubule associated protein like 5 [Homo
sapiens]
Length = 1977
Score = 33.9 bits (76), Expect = 0.31
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 133 LVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPMPQPCYCMEAYLTKDGPFLMVGDAAG 192
L P LA+T +++++W+ D +A M +P C A + DG L +G G
Sbjct: 331 LAVHPTKPLAVTGSDDRSVRIWSLVDHALIARCNMEEPIRC--AAVNADGIHLALGMKDG 388
Query: 193 DIYTFTLPGLRDVSKV 208
+FT+ +RD+++V
Sbjct: 389 ---SFTVLRVRDMTEV 401
>gi|21536371 telomerase-associated protein 1 [Homo sapiens]
Length = 2627
Score = 32.0 bits (71), Expect = 1.2
Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 112 WDVQEGTMIWSSPVQEFHFSNLVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPMPQPC 171
WD+Q G + + ++ + P L T+ +K+W+ P+
Sbjct: 1744 WDLQHGCRVLQTKAHQYQITGCCLSPDCRLLATVCLGGCLKLWDTVRGQLAFQHTYPKSL 1803
Query: 172 YCMEAYLTKDGPFLMVGDAAGDIYTFTLPGLR 203
C+ + +G + G AG I F + GL+
Sbjct: 1804 NCVAFH--PEGQVIATGSWAGSISFFQVDGLK 1833
Score = 28.9 bits (63), Expect = 9.9
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 133 LVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPMPQPCYCMEAYLTKDGPF-LMVGDAA 191
L LP+ L +T + + +K+W L + C+E +L + L VGD
Sbjct: 2561 LHVLPE--LLVTASKDRDVKLWERPSMQLLGLFRCEGSVSCLEPWLGANSTLQLAVGDVQ 2618
Query: 192 GDIY 195
G++Y
Sbjct: 2619 GNVY 2622
>gi|59938780 WD repeat domain 31 isoform 1 [Homo sapiens]
Length = 367
Score = 31.6 bits (70), Expect = 1.5
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 96 EKSIICSVSPKQELCAWDVQEGTMIWSSPVQEFHFSNLVTLPQMHLAITMDRKKTIKVWN 155
+ S +C+ S L WDV G + + V ++L +P+ + KT+++W+
Sbjct: 157 DSSQLCTGSRDNTLLLWDVVTGQSVERASVSRNVVTHLCWVPREPYILQTSEDKTLRLWD 216
Query: 156 CQDRDALAVLPMPQ--PCYC 173
+ + P Q YC
Sbjct: 217 SRGLQVAHMFPAKQHIQTYC 236
>gi|21687048 WD repeat domain 31 isoform 3 [Homo sapiens]
Length = 366
Score = 31.6 bits (70), Expect = 1.5
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 96 EKSIICSVSPKQELCAWDVQEGTMIWSSPVQEFHFSNLVTLPQMHLAITMDRKKTIKVWN 155
+ S +C+ S L WDV G + + V ++L +P+ + KT+++W+
Sbjct: 156 DSSQLCTGSRDNTLLLWDVVTGQSVERASVSRNVVTHLCWVPREPYILQTSEDKTLRLWD 215
Query: 156 CQDRDALAVLPMPQ--PCYC 173
+ + P Q YC
Sbjct: 216 SRGLQVAHMFPAKQHIQTYC 235
>gi|38569484 kinesin family member 21A [Homo sapiens]
Length = 1661
Score = 31.2 bits (69), Expect = 2.0
Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 6/125 (4%)
Query: 90 LTVDE--QEKSIICSVSPKQELCAWDVQEGTMIWSSPVQEF---HFSNLVTLP-QMHLAI 143
LTVD+ + +I + S + +DV EG + SP F H+ + L Q
Sbjct: 1485 LTVDQISSGQDLIITGSKDHYIKMFDVTEGALGTVSPTHNFEPPHYDGIEALTIQGDNLF 1544
Query: 144 TMDRKKTIKVWNCQDRDALAVLPMPQPCYCMEAYLTKDGPFLMVGDAAGDIYTFTLPGLR 203
+ R IK W+ +D L +P + + D P L+ G G + + +
Sbjct: 1545 SGSRDNGIKKWDLTQKDLLQQVPNAHKDWVCALGVVPDHPVLLSGCRGGILKVWNMDTFM 1604
Query: 204 DVSKV 208
V ++
Sbjct: 1605 PVGEM 1609
>gi|9951915 adenosylhomocysteinase isoform 1 [Homo sapiens]
Length = 432
Score = 30.8 bits (68), Expect = 2.6
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 20/77 (25%)
Query: 153 VWNCQDRDALAVLPMPQPCY------------CMEAYLT-KDGPFLMVGDAAGDI----- 194
+++ QD A A+ P Y C+E L KDGP M+ D GD+
Sbjct: 81 IFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDGPLNMILDDGGDLTNLIH 140
Query: 195 --YTFTLPGLRDVSKVT 209
Y LPG+R +S+ T
Sbjct: 141 TKYPQLLPGIRGISEET 157
>gi|239937451 adenosylhomocysteinase isoform 2 [Homo sapiens]
Length = 404
Score = 30.8 bits (68), Expect = 2.6
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 20/77 (25%)
Query: 153 VWNCQDRDALAVLPMPQPCY------------CMEAYLT-KDGPFLMVGDAAGDI----- 194
+++ QD A A+ P Y C+E L KDGP M+ D GD+
Sbjct: 53 IFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDGPLNMILDDGGDLTNLIH 112
Query: 195 --YTFTLPGLRDVSKVT 209
Y LPG+R +S+ T
Sbjct: 113 TKYPQLLPGIRGISEET 129
>gi|118402582 cell division cycle 20 [Homo sapiens]
Length = 499
Score = 30.4 bits (67), Expect = 3.4
Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 88 NRLTVDEQEKSIICSVSPKQELCAWDVQEGTMIWSSP-VQEFHFSNLVTLPQMH-LAITM 145
NRL V +K+ + ++ C + I +P ++ ++ NLV + LA+ +
Sbjct: 146 NRLKVLYSQKA---TPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVAL 202
Query: 146 DRKKTIKVWNCQDRDALAVLPMPQPC-YCMEAYLTKDGPFLMVGDAAGDIYTFTLPGLRD 204
D ++ +W+ D L +L M QP Y K+G +L VG ++ ++ + + +
Sbjct: 203 DN--SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR 260
Query: 205 VSKVTA 210
+ +T+
Sbjct: 261 LRNMTS 266
>gi|39812106 tumor differentially expressed protein 1 [Homo sapiens]
Length = 473
Score = 30.4 bits (67), Expect = 3.4
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 311 YEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINN-FW 368
++I + A C + +G Y I F + +FS+ F ++ +D +AA++N FW
Sbjct: 76 FKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDLRAAVHNGFW 134
>gi|5803193 tumor differentially expressed protein 1 [Homo sapiens]
Length = 473
Score = 30.4 bits (67), Expect = 3.4
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 311 YEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINN-FW 368
++I + A C + +G Y I F + +FS+ F ++ +D +AA++N FW
Sbjct: 76 FKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDLRAAVHNGFW 134
>gi|16554629 WD repeat domain 5 [Homo sapiens]
Length = 334
Score = 30.0 bits (66), Expect = 4.4
Identities = 17/86 (19%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 85 LSGNRLTVDE----QEKSIICSVSPKQELCAWDVQEGTMIWSSPVQEFHFSNLVTLPQMH 140
+SG++L + + + +++ S S + L WDV G + + + PQ +
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 141 LAITMDRKKTIKVWNCQDRDALAVLP 166
L ++ +++++W+ + L LP
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLP 168
>gi|16554627 WD repeat domain 5 [Homo sapiens]
Length = 334
Score = 30.0 bits (66), Expect = 4.4
Identities = 17/86 (19%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 85 LSGNRLTVDE----QEKSIICSVSPKQELCAWDVQEGTMIWSSPVQEFHFSNLVTLPQMH 140
+SG++L + + + +++ S S + L WDV G + + + PQ +
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 141 LAITMDRKKTIKVWNCQDRDALAVLP 166
L ++ +++++W+ + L LP
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLP 168
>gi|10834992 interleukin 13 receptor, alpha 2 precursor [Homo
sapiens]
Length = 380
Score = 30.0 bits (66), Expect = 4.4
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 8/100 (8%)
Query: 128 FHFSNLVT-LPQMHLAITMDRKKTIKVWNCQDRDALAVLPMPQPCYCMEAYLTKDGPFLM 186
F N+V LP ++L T + IK+ + ++ + P+P C+ E + +D L+
Sbjct: 230 FQLQNIVKPLPPVYLTFTRESSCEIKL-----KWSIPLGPIPARCFDYEIEIREDDTTLV 284
Query: 187 VGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKW 226
+ T+TL + ++ V ++CS D W
Sbjct: 285 TATVENE--TYTLKTTNETRQLCFVVRSKVNIYCSDDGIW 322
>gi|223029510 echinoderm microtubule associated protein like 4
isoform b [Homo sapiens]
Length = 923
Score = 30.0 bits (66), Expect = 4.4
Identities = 38/174 (21%), Positives = 66/174 (37%), Gaps = 19/174 (10%)
Query: 67 NFIYKVTKNIAFETELAYLSGNRLTVDEQE-KSIICSVSPKQELCAWDVQEGTMIWSSPV 125
NFI + T N F+ E+ + + K ++ + + +++C W+ E + W+ V
Sbjct: 515 NFILRGTFNDGFQIEVQGHTDELWGLATHPFKDLLLTCAQDRQVCLWNSMEHRLEWTRLV 574
Query: 126 QE------FHFSNLVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPMPQPCYCMEAYLT 179
E FH S V H V + + RD +++ + Y +
Sbjct: 575 DEPGHCADFHPSGTVVAIGTHSGRWF-------VLDAETRDLVSIHTDGNEQLSVMRY-S 626
Query: 180 KDGPFLMVGDAAGDIYTFTLP----GLRDVSKVTAFQYGIVLLHCSPDKKWVFA 229
DG FL VG IY + + + T I L SPD K++ +
Sbjct: 627 IDGTFLAVGSHDNFIYLYVVSENGRKYSRYGRCTGHSSYITHLDWSPDNKYIMS 680
>gi|19923497 echinoderm microtubule associated protein like 4
isoform a [Homo sapiens]
Length = 981
Score = 30.0 bits (66), Expect = 4.4
Identities = 38/174 (21%), Positives = 66/174 (37%), Gaps = 19/174 (10%)
Query: 67 NFIYKVTKNIAFETELAYLSGNRLTVDEQE-KSIICSVSPKQELCAWDVQEGTMIWSSPV 125
NFI + T N F+ E+ + + K ++ + + +++C W+ E + W+ V
Sbjct: 573 NFILRGTFNDGFQIEVQGHTDELWGLATHPFKDLLLTCAQDRQVCLWNSMEHRLEWTRLV 632
Query: 126 QE------FHFSNLVTLPQMHLAITMDRKKTIKVWNCQDRDALAVLPMPQPCYCMEAYLT 179
E FH S V H V + + RD +++ + Y +
Sbjct: 633 DEPGHCADFHPSGTVVAIGTHSGRWF-------VLDAETRDLVSIHTDGNEQLSVMRY-S 684
Query: 180 KDGPFLMVGDAAGDIYTFTLP----GLRDVSKVTAFQYGIVLLHCSPDKKWVFA 229
DG FL VG IY + + + T I L SPD K++ +
Sbjct: 685 IDGTFLAVGSHDNFIYLYVVSENGRKYSRYGRCTGHSSYITHLDWSPDNKYIMS 738
>gi|221219050 transducin-like enhancer protein 2 isoform 3 [Homo
sapiens]
Length = 621
Score = 30.0 bits (66), Expect = 4.4
Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 6/137 (4%)
Query: 148 KKTIKVWNCQDRDALAVLP----MPQPCYCMEAYLTKDGPFLMVGDAAG--DIYTFTLPG 201
K +KVW+ A + + + Y L DG L+VG A I+ P
Sbjct: 355 KGCVKVWDVGQPGAKTPVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPT 414
Query: 202 LRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRPSEGSVPLSTFLP 261
R +++T+ L SPD K F+C + + ++++R +G ++ +
Sbjct: 415 PRIKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCID 474
Query: 262 HKLCASACWTPKVKNRI 278
+ WT + N +
Sbjct: 475 ISDYGTRLWTGGLDNTV 491
>gi|221219048 transducin-like enhancer protein 2 isoform 2 [Homo
sapiens]
Length = 706
Score = 30.0 bits (66), Expect = 4.4
Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 6/137 (4%)
Query: 148 KKTIKVWNCQDRDALAVLP----MPQPCYCMEAYLTKDGPFLMVGDAAG--DIYTFTLPG 201
K +KVW+ A + + + Y L DG L+VG A I+ P
Sbjct: 491 KGCVKVWDVGQPGAKTPVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPT 550
Query: 202 LRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRPSEGSVPLSTFLP 261
R +++T+ L SPD K F+C + + ++++R +G ++ +
Sbjct: 551 PRIKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCID 610
Query: 262 HKLCASACWTPKVKNRI 278
+ WT + N +
Sbjct: 611 ISDYGTRLWTGGLDNTV 627
>gi|21361151 transducin-like enhancer protein 2 isoform 1 [Homo
sapiens]
Length = 743
Score = 30.0 bits (66), Expect = 4.4
Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 6/137 (4%)
Query: 148 KKTIKVWNCQDRDALAVLP----MPQPCYCMEAYLTKDGPFLMVGDAAG--DIYTFTLPG 201
K +KVW+ A + + + Y L DG L+VG A I+ P
Sbjct: 477 KGCVKVWDVGQPGAKTPVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIWDLAAPT 536
Query: 202 LRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRPSEGSVPLSTFLP 261
R +++T+ L SPD K F+C + + ++++R +G ++ +
Sbjct: 537 PRIKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHTDGASCID 596
Query: 262 HKLCASACWTPKVKNRI 278
+ WT + N +
Sbjct: 597 ISDYGTRLWTGGLDNTV 613
>gi|4557741 platelet-activating factor acetylhydrolase, isoform Ib,
alpha subunit [Homo sapiens]
Length = 410
Score = 29.6 bits (65), Expect = 5.8
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 99 IICSVSPKQELCAWDVQEGTMIWSSPVQEFHFSNLVTLPQMHLAITMDRKKTIKVWNCQ 157
++ S S + WD Q I + + + S++ +P ++ R KTIK+W Q
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
>gi|34915994 transducin-like enhancer protein 4 [Homo sapiens]
Length = 773
Score = 29.6 bits (65), Expect = 5.8
Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 6/137 (4%)
Query: 148 KKTIKVWNCQ---DRDALAVLP-MPQPCYCMEAYLTKDGPFLMVGDAAG--DIYTFTLPG 201
K +KVW+ ++ ++ L + + Y L DG L+VG A I+ P
Sbjct: 507 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCRLLPDGRTLIVGGEASTLSIWDLAAPT 566
Query: 202 LRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQVFLTESLLRPSEGSVPLSTFLP 261
R +++T+ L SPD K F+C + ++L+R +G ++ +
Sbjct: 567 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID 626
Query: 262 HKLCASACWTPKVKNRI 278
+ WT + N +
Sbjct: 627 ISNDGTKLWTGGLDNTV 643
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 29.3 bits (64), Expect = 7.5
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 181 DGPFLMVGDAAGDIYTFTLPGLRDVSKVTAFQYGIVLLHCSPDKKWVFACGTYSRTLPQV 240
D FL G+ AG+I ++L + A Q G++ + P+ + G+ S
Sbjct: 213 DQGFLYAGNQAGEIQVWSLQQGHPLHSFQAHQSGVICIRSRPEAHTLLTAGSDSLIKEWN 272
Query: 241 FLTESLLRPSE 251
+ SLLR E
Sbjct: 273 LTSGSLLRRLE 283
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.134 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,671,170
Number of Sequences: 37866
Number of extensions: 773084
Number of successful extensions: 1537
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1521
Number of HSP's gapped (non-prelim): 41
length of query: 445
length of database: 18,247,518
effective HSP length: 105
effective length of query: 340
effective length of database: 14,271,588
effective search space: 4852339920
effective search space used: 4852339920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.