Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FBXW12 Sequence: fasta or formatted (445aa) NCBI GI: 229576906
Description:

F-box and WD repeat domain containing 12 isoform 3

Referenced in:

Cullins and SCF Complexes
WD Repeat Proteins

Other entries for this name:
alt prot [464aa] F-box and WD repeat domain containing 12 isoform 1
alt prot [394aa] F-box and WD repeat domain containing 12 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         24           2
 C cysteine            3.6         16           2
 D aspartate           4.9         22           1
 E glutamate           4.0         18           2
 F phenylalanine       4.7         21           2
 G glycine             4.3         19           2
 H histidine           3.8         17           1
 I isoleucine          4.9         22           2
 K lysine              5.2         23           2
 L leucine             9.9         44           3
 M methionine          2.9         13           1
 N asparagine          3.4         15           2
 P proline             4.7         21           1
 Q glutamine           4.9         22           1
 R arginine            4.0         18           2
 S serine              8.5         38           2
 T threonine           8.1         36           2
 V valine              6.3         28           1
 W tryptophan          2.9         13           1
 Y tyrosine            3.4         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and WD repeat domain containing 12 isoform 3 ... 
FBXW12                0.976   F-box and WD repeat domain containing 12 isoform 1 ...
FBXW12                0.735   F-box and WD repeat domain containing 12 isoform 2 ...
NEDD1                 0.018   neural precursor cell expressed, developmentally do...
NEDD1                 0.018   neural precursor cell expressed, developmentally do...
NEDD1                 0.018   neural precursor cell expressed, developmentally dow...
NEDD1                 0.018   neural precursor cell expressed, developmentally do...
RAE1                  0.013   RAE1 (RNA export 1, S.pombe) homolog 
RAE1                  0.013   RAE1 (RNA export 1, S.pombe) homolog 
EML5                  0.010   echinoderm microtubule associated protein like 5 [Ho...
TEP1                  0.008   telomerase-associated protein 1 
WDR31                 0.008   WD repeat domain 31 isoform 1 
WDR31                 0.008   WD repeat domain 31 isoform 3 
KIF21A                0.007   kinesin family member 21A 
AHCY                  0.007   adenosylhomocysteinase isoform 1 
AHCY                  0.007   adenosylhomocysteinase isoform 2 
CDC20                 0.006   cell division cycle 20 
SERINC3               0.006   tumor differentially expressed protein 1 
SERINC3               0.006   tumor differentially expressed protein 1 
WDR5                  0.006   WD repeat domain 5 
WDR5                  0.006   WD repeat domain 5 
IL13RA2               0.006   interleukin 13 receptor, alpha 2 precursor 
EML4                  0.006   echinoderm microtubule associated protein like 4 is...
EML4                  0.006   echinoderm microtubule associated protein like 4 iso...
TLE2                  0.006   transducin-like enhancer protein 2 isoform 3 
TLE2                  0.006   transducin-like enhancer protein 2 isoform 2 
TLE2                  0.006   transducin-like enhancer protein 2 isoform 1 
PAFAH1B1              0.006   platelet-activating factor acetylhydrolase, isoform I...
TLE4                  0.006   transducin-like enhancer protein 4 
WDR87                 0.004   NYD-SP11 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press