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Search of human proteins with 22749455
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22749455 ring finger protein 182 [Homo sapiens]
(247 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22749455 ring finger protein 182 [Homo sapiens] 512 e-145
gi|27734873 ring finger protein 152 [Homo sapiens] 61 1e-09
gi|119220603 ring finger protein 208 [Homo sapiens] 57 1e-08
gi|153252110 ring finger protein 183 [Homo sapiens] 55 4e-08
gi|32454739 tripartite motif-containing 3 [Homo sapiens] 49 4e-06
gi|32454737 tripartite motif-containing 3 [Homo sapiens] 49 4e-06
gi|239752655 PREDICTED: hypothetical protein [Homo sapiens] 48 7e-06
gi|239747208 PREDICTED: hypothetical protein [Homo sapiens] 48 7e-06
gi|239740999 PREDICTED: hypothetical protein [Homo sapiens] 48 7e-06
gi|9506663 ring finger protein 186 [Homo sapiens] 48 7e-06
gi|153791514 tripartite motif-containing 32 [Homo sapiens] 47 2e-05
gi|153792582 tripartite motif-containing 32 [Homo sapiens] 47 2e-05
gi|30794216 tripartite motif-containing 56 [Homo sapiens] 46 3e-05
gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens] 46 3e-05
gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens] 46 3e-05
gi|226442736 ring finger protein 222 [Homo sapiens] 44 1e-04
gi|239756718 PREDICTED: ring finger protein 222 [Homo sapiens] 44 1e-04
gi|239751213 PREDICTED: ring finger protein 222 [Homo sapiens] 44 1e-04
gi|239745703 PREDICTED: ring finger protein 222 [Homo sapiens] 44 1e-04
gi|40255283 NHL repeat containing 1 [Homo sapiens] 44 2e-04
gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens] 42 6e-04
gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo sap... 41 8e-04
gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo sap... 41 8e-04
gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo sap... 41 8e-04
gi|51988887 SH3 domain containing ring finger 1 [Homo sapiens] 41 0.001
gi|35493801 ring finger protein 19 [Homo sapiens] 40 0.001
gi|35493782 ring finger protein 19 [Homo sapiens] 40 0.001
gi|156105697 ring finger and CCCH-type zinc finger domains 2 iso... 40 0.001
gi|156105699 ring finger and CCCH-type zinc finger domains 2 iso... 40 0.001
gi|27436877 tripartite motif-containing 59 [Homo sapiens] 40 0.002
>gi|22749455 ring finger protein 182 [Homo sapiens]
Length = 247
Score = 512 bits (1319), Expect = e-145
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MASQPPEDTAESQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQG 60
MASQPPEDTAESQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQG
Sbjct: 1 MASQPPEDTAESQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQG 60
Query: 61 VIVCPFCRFETCLPDDEVSSLPDDNNILVNLTCGGKGKKCLPENPTELLLTPKRLASLVS 120
VIVCPFCRFETCLPDDEVSSLPDDNNILVNLTCGGKGKKCLPENPTELLLTPKRLASLVS
Sbjct: 61 VIVCPFCRFETCLPDDEVSSLPDDNNILVNLTCGGKGKKCLPENPTELLLTPKRLASLVS 120
Query: 121 PSHTSSNCLVITIMEVQRESSPSLSSTPVVEFYRPASFDSVTTVSHNWTVWNCTSLLFQT 180
PSHTSSNCLVITIMEVQRESSPSLSSTPVVEFYRPASFDSVTTVSHNWTVWNCTSLLFQT
Sbjct: 121 PSHTSSNCLVITIMEVQRESSPSLSSTPVVEFYRPASFDSVTTVSHNWTVWNCTSLLFQT 180
Query: 181 SIRVLVWLLGLLYFSSLPLGIYLLVSKKVTLGVVFVSLVPSSLVILMVYGFCQCVCHEFL 240
SIRVLVWLLGLLYFSSLPLGIYLLVSKKVTLGVVFVSLVPSSLVILMVYGFCQCVCHEFL
Sbjct: 181 SIRVLVWLLGLLYFSSLPLGIYLLVSKKVTLGVVFVSLVPSSLVILMVYGFCQCVCHEFL 240
Query: 241 DCMAPPS 247
DCMAPPS
Sbjct: 241 DCMAPPS 247
>gi|27734873 ring finger protein 152 [Homo sapiens]
Length = 203
Score = 60.8 bits (146), Expect = 1e-09
Identities = 54/187 (28%), Positives = 81/187 (43%), Gaps = 22/187 (11%)
Query: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDD- 76
LEC+IC+N Y+ +R+PK+L+C H C+ CL ++ + Q + CP+CR T LP
Sbjct: 10 LECQICFNYYS-PRRRPKLLDCKHTCCSVCLQQM----RTSQKDVRCPWCRGVTKLPPGF 64
Query: 77 EVSSLPDDNNILVNLTCGGKGKKC-----LPENPTELLLTPKRLASLVSPSHTSSNCL-- 129
VS LPDD +L + + LP N +L P + P L
Sbjct: 65 SVSQLPDDPEVLAVIAIPHTSEHTPVFIKLPSNGCYMLPLPISKERALLPGDMGCRLLPG 124
Query: 130 ----VITIMEVQRESSPSLSSTPVVEFYRPASFDSVTTVSHNWTVWNCTSLLFQTSIRVL 185
+T++ + E P P V S W+ CT +L VL
Sbjct: 125 SQQKSVTVVTIPAEQQPLQGGAPQEAVEEEQDRRGVVK-SSTWS-GVCTVILVAC---VL 179
Query: 186 VWLLGLL 192
V+LLG++
Sbjct: 180 VFLLGIV 186
>gi|119220603 ring finger protein 208 [Homo sapiens]
Length = 261
Score = 57.4 bits (137), Expect = 1e-08
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 5 PPEDTAESQASDE-LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIV 63
P A S A+ E LEC C + YN+ QR+P+VL C H VC +CL +I+ I
Sbjct: 127 PSASAASSAAAGEPLECPTCGHSYNVTQRRPRVLSCLHSVCEQCL-QILYESCPKYKFIS 185
Query: 64 CPFCRFETCL-PDDEVSSLPDDNNILVNL 91
CP CR ET L D +++L + +IL L
Sbjct: 186 CPTCRRETVLFTDYGLAALAVNTSILSRL 214
>gi|153252110 ring finger protein 183 [Homo sapiens]
Length = 192
Score = 55.5 bits (132), Expect = 4e-08
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 10 AESQASD-ELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCR 68
AE Q + E EC +C+N +N PK+L+CCH C +CL + + ++CP CR
Sbjct: 2 AEQQGRELEAECPVCWNPFNNTFHTPKMLDCCHSFCVECLAH-LSLVTPARRRLLCPLCR 60
Query: 69 FETCLPDDE-VSSLPDDNNILVNL 91
T L + V+ LP D +L L
Sbjct: 61 QPTVLASGQPVTDLPTDTAMLALL 84
>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 48.9 bits (115), Expect = 4e-06
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 1 MASQPPEDTAESQASDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSP 58
MA + E Q D+ L C IC +RY PKVL C H C +CL I +
Sbjct: 1 MAKREDSPGPEVQPMDKQFLVCSICLDRYQC----PKVLPCLHTFCERCLQNYI---PAQ 53
Query: 59 QGVIVCPFCRFETCLPDDEVSSLPDDNNILVN 90
+ CP CR + LP+ VS+L NN ++
Sbjct: 54 SLTLSCPVCRQTSILPEQGVSAL--QNNFFIS 83
>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 48.9 bits (115), Expect = 4e-06
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 1 MASQPPEDTAESQASDE--LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSP 58
MA + E Q D+ L C IC +RY PKVL C H C +CL I +
Sbjct: 1 MAKREDSPGPEVQPMDKQFLVCSICLDRYQC----PKVLPCLHTFCERCLQNYI---PAQ 53
Query: 59 QGVIVCPFCRFETCLPDDEVSSLPDDNNILVN 90
+ CP CR + LP+ VS+L NN ++
Sbjct: 54 SLTLSCPVCRQTSILPEQGVSAL--QNNFFIS 83
>gi|239752655 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 48.1 bits (113), Expect = 7e-06
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 6 PEDTAESQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKII---DFGDSPQGVI 62
P + + LEC IC++ Y+ + PK L C H C +CL ++ G +
Sbjct: 37 PGTPGSERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAV 96
Query: 63 VCPFCRFETCLP 74
CPFCR T +P
Sbjct: 97 PCPFCRQPTAVP 108
>gi|239747208 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 48.1 bits (113), Expect = 7e-06
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 6 PEDTAESQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKII---DFGDSPQGVI 62
P + + LEC IC++ Y+ + PK L C H C +CL ++ G +
Sbjct: 37 PGTPGSERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAV 96
Query: 63 VCPFCRFETCLP 74
CPFCR T +P
Sbjct: 97 PCPFCRQPTAVP 108
>gi|239740999 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 48.1 bits (113), Expect = 7e-06
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 6 PEDTAESQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKII---DFGDSPQGVI 62
P + + LEC IC++ Y+ + PK L C H C +CL ++ G +
Sbjct: 37 PGTPGSERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAV 96
Query: 63 VCPFCRFETCLP 74
CPFCR T +P
Sbjct: 97 PCPFCRQPTAVP 108
>gi|9506663 ring finger protein 186 [Homo sapiens]
Length = 227
Score = 48.1 bits (113), Expect = 7e-06
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 17 ELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDD 76
+LEC +C Y+ R PK+L C H CA CL ++ D+ I CP CR T +P
Sbjct: 37 DLECLVCREPYSCP-RLPKLLACQHAFCAICLKLLLCVQDNTWS-ITCPLCRKVTAVPGG 94
Query: 77 EVSSLPDDNNILVNL 91
+ SL D ++ L
Sbjct: 95 LICSLRDHEAVVGQL 109
>gi|153791514 tripartite motif-containing 32 [Homo sapiens]
Length = 653
Score = 47.0 bits (110), Expect = 2e-05
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFC 67
LEC IC + +Q +PK+L C H +C +CL K++ S GV CPFC
Sbjct: 18 LECPICMESFTEEQLRPKLLHCGHTICRQCLEKLL--ASSINGV-RCPFC 64
>gi|153792582 tripartite motif-containing 32 [Homo sapiens]
Length = 653
Score = 47.0 bits (110), Expect = 2e-05
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFC 67
LEC IC + +Q +PK+L C H +C +CL K++ S GV CPFC
Sbjct: 18 LECPICMESFTEEQLRPKLLHCGHTICRQCLEKLL--ASSINGV-RCPFC 64
>gi|30794216 tripartite motif-containing 56 [Homo sapiens]
Length = 755
Score = 46.2 bits (108), Expect = 3e-05
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 11 ESQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFE 70
E+ +SD L CKIC + R PK L C H C CL ++ D G + CP CR
Sbjct: 12 EALSSDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLAD-----GGRVRCPECRET 62
Query: 71 TCLPDDEVSSLPDDNNILVN 90
+P + V+S N VN
Sbjct: 63 VPVPPEGVASF--KTNFFVN 80
>gi|194248081 tripartite motif-containing 2 isoform 2 [Homo
sapiens]
Length = 744
Score = 46.2 bits (108), Expect = 3e-05
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
L C IC RY + PKVL C H C +CL I + + CP CR + LP+
Sbjct: 21 LICSICLERY----KNPKVLPCLHTFCERCLQNYI---PAHSLTLSCPVCRQTSILPEKG 73
Query: 78 VSSLPDDNNILVNL 91
V++L +N + NL
Sbjct: 74 VAAL-QNNFFITNL 86
>gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]
Length = 771
Score = 46.2 bits (108), Expect = 3e-05
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCLPDDE 77
L C IC RY + PKVL C H C +CL I + + CP CR + LP+
Sbjct: 48 LICSICLERY----KNPKVLPCLHTFCERCLQNYI---PAHSLTLSCPVCRQTSILPEKG 100
Query: 78 VSSLPDDNNILVNL 91
V++L +N + NL
Sbjct: 101 VAAL-QNNFFITNL 113
>gi|226442736 ring finger protein 222 [Homo sapiens]
Length = 220
Score = 44.3 bits (103), Expect = 1e-04
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 11 ESQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKII---DFGDSPQGVIVCPFC 67
ES+ S EC +CY ++ + + L C H C CL K + Q +VCP C
Sbjct: 5 ESKDSSGSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSTRVDGQVQRTLVCPIC 64
Query: 68 RFETCL 73
R+ T L
Sbjct: 65 RYVTFL 70
>gi|239756718 PREDICTED: ring finger protein 222 [Homo sapiens]
Length = 220
Score = 44.3 bits (103), Expect = 1e-04
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 11 ESQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKII---DFGDSPQGVIVCPFC 67
ES+ S EC +CY ++ + + L C H C CL K + Q +VCP C
Sbjct: 5 ESKDSSGSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSTRVDGQVQRTLVCPIC 64
Query: 68 RFETCL 73
R+ T L
Sbjct: 65 RYVTFL 70
>gi|239751213 PREDICTED: ring finger protein 222 [Homo sapiens]
Length = 220
Score = 44.3 bits (103), Expect = 1e-04
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 11 ESQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKII---DFGDSPQGVIVCPFC 67
ES+ S EC +CY ++ + + L C H C CL K + Q +VCP C
Sbjct: 5 ESKDSSGSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSTRVDGQVQRTLVCPIC 64
Query: 68 RFETCL 73
R+ T L
Sbjct: 65 RYVTFL 70
>gi|239745703 PREDICTED: ring finger protein 222 [Homo sapiens]
Length = 220
Score = 44.3 bits (103), Expect = 1e-04
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 11 ESQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKII---DFGDSPQGVIVCPFC 67
ES+ S EC +CY ++ + + L C H C CL K + Q +VCP C
Sbjct: 5 ESKDSSGSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSTRVDGQVQRTLVCPIC 64
Query: 68 RFETCL 73
R+ T L
Sbjct: 65 RYVTFL 70
>gi|40255283 NHL repeat containing 1 [Homo sapiens]
Length = 395
Score = 43.5 bits (101), Expect = 2e-04
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 18 LECKICYNRY-NLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGV-IVCPFCRFETCLPD 75
LECK+C+ ++ + +QR+P+ L C H VC C+ + P+ + + CPFCR C
Sbjct: 24 LECKVCFEKFGHRQQRRPRNLSCGHVVCLACVAALA----HPRTLALECPFCR-RACRGC 78
Query: 76 DEVSSLP 82
D LP
Sbjct: 79 DTSDCLP 85
>gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens]
Length = 882
Score = 41.6 bits (96), Expect = 6e-04
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 7 EDTAESQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPF 66
ED ES D LEC +C R + KVL C H C +CL I+ + + CP
Sbjct: 44 EDMDESSLLDLLECSVCLERLDTTA---KVLPCQHTFCRRCLESIV----CSRHELRCPE 96
Query: 67 CRFETCLPDDEVSSLPDDNNILVNLTCG 94
CR DE+ + N +LV L G
Sbjct: 97 CRILVGCGVDELPA----NILLVRLLDG 120
>gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 41.2 bits (95), Expect = 8e-04
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCL-PDD 76
+EC IC + ++ + PK L+C H C +CL ++ + CP CR T L P
Sbjct: 62 VECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPRR 121
Query: 77 EVSSLPDDNNIL 88
+ +LP + +L
Sbjct: 122 GLPALPTQSGLL 133
>gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 41.2 bits (95), Expect = 8e-04
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCL-PDD 76
+EC IC + ++ + PK L+C H C +CL ++ + CP CR T L P
Sbjct: 62 VECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPRR 121
Query: 77 EVSSLPDDNNIL 88
+ +LP + +L
Sbjct: 122 GLPALPTQSGLL 133
>gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 41.2 bits (95), Expect = 8e-04
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 18 LECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFETCL-PDD 76
+EC IC + ++ + PK L+C H C +CL ++ + CP CR T L P
Sbjct: 62 VECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPRR 121
Query: 77 EVSSLPDDNNIL 88
+ +LP + +L
Sbjct: 122 GLPALPTQSGLL 133
>gi|51988887 SH3 domain containing ring finger 1 [Homo sapiens]
Length = 888
Score = 40.8 bits (94), Expect = 0.001
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
Query: 11 ESQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGVIVCPFCRFE 70
ES D LEC +C R + KVL C H C +CL I+ + + CP CR
Sbjct: 3 ESALLDLLECPVCLERLDASA---KVLPCQHTFCKRCLLGIV----GSRNELRCPECR-- 53
Query: 71 TCLPDDEVSSLPDDNNILVNLTCGGKGKKCLP 102
L V LP N +LV L G K + P
Sbjct: 54 -TLVGSGVEELP-SNILLVRLLDGIKQRPWKP 83
>gi|35493801 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 40.4 bits (93), Expect = 0.001
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 13 QASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGV-IVCPFCRFET 71
Q D +EC +C R++ K R P ++ C HR C CL + + S V I CP C E
Sbjct: 125 QIGDFIECPLCLLRHS-KDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT-ER 182
Query: 72 CLPDDEVSSLPDD 84
P D L DD
Sbjct: 183 FNPHDIRLILSDD 195
>gi|35493782 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 40.4 bits (93), Expect = 0.001
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 13 QASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDSPQGV-IVCPFCRFET 71
Q D +EC +C R++ K R P ++ C HR C CL + + S V I CP C E
Sbjct: 125 QIGDFIECPLCLLRHS-KDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPECT-ER 182
Query: 72 CLPDDEVSSLPDD 84
P D L DD
Sbjct: 183 FNPHDIRLILSDD 195
>gi|156105697 ring finger and CCCH-type zinc finger domains 2
isoform 1 [Homo sapiens]
Length = 1191
Score = 40.4 bits (93), Expect = 0.001
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 12 SQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKI 51
+Q ++ L C ICYN ++ KP L C H VC CL K+
Sbjct: 6 AQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKL 45
>gi|156105699 ring finger and CCCH-type zinc finger domains 2
isoform 2 [Homo sapiens]
Length = 1064
Score = 40.4 bits (93), Expect = 0.001
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 12 SQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKI 51
+Q ++ L C ICYN ++ KP L C H VC CL K+
Sbjct: 6 AQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKL 45
>gi|27436877 tripartite motif-containing 59 [Homo sapiens]
Length = 403
Score = 40.0 bits (92), Expect = 0.002
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 16 DELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKIIDFGDS-----PQGV-IVCPFCRF 69
+EL C ICY+ + P+VL C H C CL I+ + P + + CP CR
Sbjct: 6 EELTCPICYSIFE----DPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRS 61
Query: 70 ETCLPDDEVSSLP 82
T + + SLP
Sbjct: 62 ITEIAPTGIESLP 74
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,634,202
Number of Sequences: 37866
Number of extensions: 486390
Number of successful extensions: 1443
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 1368
Number of HSP's gapped (non-prelim): 182
length of query: 247
length of database: 18,247,518
effective HSP length: 100
effective length of query: 147
effective length of database: 14,460,918
effective search space: 2125754946
effective search space used: 2125754946
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.