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Search of human proteins with 22748809
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22748809 UBX domain protein 10 [Homo sapiens]
(280 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22748809 UBX domain protein 10 [Homo sapiens] 560 e-160
gi|119943102 CREB binding protein isoform b [Homo sapiens] 39 0.005
gi|119943104 CREB binding protein isoform a [Homo sapiens] 39 0.005
gi|33188439 cytoplasmic polyadenylation element binding protein ... 37 0.019
gi|33188441 cytoplasmic polyadenylation element binding protein ... 37 0.019
gi|150170670 piccolo isoform 2 [Homo sapiens] 35 0.073
gi|150378539 piccolo isoform 1 [Homo sapiens] 35 0.073
gi|42518068 trans-golgi network protein 2 [Homo sapiens] 35 0.096
gi|145580608 WD repeat domain 62 isoform 1 [Homo sapiens] 34 0.12
gi|145580610 WD repeat domain 62 isoform 2 [Homo sapiens] 34 0.12
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 33 0.28
gi|87196343 PDZ domain containing 2 [Homo sapiens] 33 0.28
gi|45243501 BCL2-like 13 (apoptosis facilitator) [Homo sapiens] 33 0.36
gi|238859557 regulatory factor X1 [Homo sapiens] 32 0.47
gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens] 32 0.47
gi|21536411 bridging integrator 1 isoform 6 [Homo sapiens] 32 0.47
gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens] 32 0.47
gi|46852390 coiled-coil domain containing 6 [Homo sapiens] 32 0.47
gi|109255230 centrosomal protein 170kDa isoform beta [Homo sapiens] 32 0.47
gi|109255228 centrosomal protein 170kDa isoform alpha [Homo sapi... 32 0.47
gi|109255232 centrosomal protein 170kDa isoform gamma [Homo sapi... 32 0.47
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 32 0.62
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 32 0.62
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 32 0.62
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 32 0.62
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 32 0.62
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 32 0.62
gi|21536407 bridging integrator 1 isoform 4 [Homo sapiens] 32 0.81
gi|112421108 capicua homolog [Homo sapiens] 32 0.81
gi|113865921 hypothetical protein LOC441457 [Homo sapiens] 32 0.81
>gi|22748809 UBX domain protein 10 [Homo sapiens]
Length = 280
Score = 560 bits (1443), Expect = e-160
Identities = 280/280 (100%), Positives = 280/280 (100%)
Query: 1 MATEAPVNIAPPECSTVVSTAVDSLIWQPNSLNMHMIRPKSAKGRTRPSLQKSQGVEVCA 60
MATEAPVNIAPPECSTVVSTAVDSLIWQPNSLNMHMIRPKSAKGRTRPSLQKSQGVEVCA
Sbjct: 1 MATEAPVNIAPPECSTVVSTAVDSLIWQPNSLNMHMIRPKSAKGRTRPSLQKSQGVEVCA 60
Query: 61 HHIPSPPPAIPYELPSSQKPGACAPKSPNQGASDEIPELQQQVPTGASSSLNKYPVLPSI 120
HHIPSPPPAIPYELPSSQKPGACAPKSPNQGASDEIPELQQQVPTGASSSLNKYPVLPSI
Sbjct: 61 HHIPSPPPAIPYELPSSQKPGACAPKSPNQGASDEIPELQQQVPTGASSSLNKYPVLPSI 120
Query: 121 NRKNLEEEAVETVAKKASSLQLSSIRALYQDETGTMKTSEEDSRARACAVERKFIVRTKK 180
NRKNLEEEAVETVAKKASSLQLSSIRALYQDETGTMKTSEEDSRARACAVERKFIVRTKK
Sbjct: 121 NRKNLEEEAVETVAKKASSLQLSSIRALYQDETGTMKTSEEDSRARACAVERKFIVRTKK 180
Query: 181 QGSSRAGNLEEPSDQEPRLLLAVRSPTGQRFVRHFRPTDDLQTIVAVAEQKNKTSYRHCS 240
QGSSRAGNLEEPSDQEPRLLLAVRSPTGQRFVRHFRPTDDLQTIVAVAEQKNKTSYRHCS
Sbjct: 181 QGSSRAGNLEEPSDQEPRLLLAVRSPTGQRFVRHFRPTDDLQTIVAVAEQKNKTSYRHCS 240
Query: 241 IETMEVPRRRFSDLTKSLQECRIPHKSVLGISLEDGEGWP 280
IETMEVPRRRFSDLTKSLQECRIPHKSVLGISLEDGEGWP
Sbjct: 241 IETMEVPRRRFSDLTKSLQECRIPHKSVLGISLEDGEGWP 280
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 38.9 bits (89), Expect = 0.005
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 21/208 (10%)
Query: 6 PVNIAPPECSTVVSTAVDSLIWQPNSLNMHMIRPKSAKGRTRPSLQKSQGVEVCAH-HIP 64
P AP + ST VS++ + P S+ P + + ++ P++Q + +V P
Sbjct: 842 PQPAAPTQPSTPVSSSGQTPTPTPGSV------PSATQTQSTPTVQAAAQAQVTPQPQTP 895
Query: 65 SPPPAIPYELPSSQKPGACAPKSPNQGASDEIPELQQQVPTGAS------SSLNKYPVLP 118
PP++ S Q+P + P S + +VPT +S +S P +P
Sbjct: 896 VQPPSVATPQSSQQQPTPVHAQPPGTPLSQAAASIDNRVPTPSSVASAETNSQQPGPDVP 955
Query: 119 SINRK------NLEEEAVETVAKKASSLQLSSIRALYQ--DETGTMKTSEEDSRARACAV 170
+ K + E + E+ + S + ++ Q +ET + E
Sbjct: 956 VLEMKTETQAEDTEPDPGESKGEPRSEMMEEDLQGASQVKEETDIAEQKSEPMEVDEKKP 1015
Query: 171 ERKFIVRTKKQGSSRAGNLEEPSDQEPR 198
E K V+ +++ SS + S +PR
Sbjct: 1016 EVKVEVKEEEESSSNGTASQSTSPSQPR 1043
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 38.9 bits (89), Expect = 0.005
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 21/208 (10%)
Query: 6 PVNIAPPECSTVVSTAVDSLIWQPNSLNMHMIRPKSAKGRTRPSLQKSQGVEVCAH-HIP 64
P AP + ST VS++ + P S+ P + + ++ P++Q + +V P
Sbjct: 880 PQPAAPTQPSTPVSSSGQTPTPTPGSV------PSATQTQSTPTVQAAAQAQVTPQPQTP 933
Query: 65 SPPPAIPYELPSSQKPGACAPKSPNQGASDEIPELQQQVPTGAS------SSLNKYPVLP 118
PP++ S Q+P + P S + +VPT +S +S P +P
Sbjct: 934 VQPPSVATPQSSQQQPTPVHAQPPGTPLSQAAASIDNRVPTPSSVASAETNSQQPGPDVP 993
Query: 119 SINRK------NLEEEAVETVAKKASSLQLSSIRALYQ--DETGTMKTSEEDSRARACAV 170
+ K + E + E+ + S + ++ Q +ET + E
Sbjct: 994 VLEMKTETQAEDTEPDPGESKGEPRSEMMEEDLQGASQVKEETDIAEQKSEPMEVDEKKP 1053
Query: 171 ERKFIVRTKKQGSSRAGNLEEPSDQEPR 198
E K V+ +++ SS + S +PR
Sbjct: 1054 EVKVEVKEEEESSSNGTASQSTSPSQPR 1081
>gi|33188439 cytoplasmic polyadenylation element binding protein 2
isoform B [Homo sapiens]
Length = 589
Score = 37.0 bits (84), Expect = 0.019
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 64 PSPPPAIPYELPSSQKPGACAPKSPNQGASDEIPELQQQVPTGASSSLNK 113
P PPPA+ +P Q P AP+ P S P+LQQQ A++ L +
Sbjct: 62 PPPPPAM--NIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQ 109
>gi|33188441 cytoplasmic polyadenylation element binding protein 2
isoform A [Homo sapiens]
Length = 559
Score = 37.0 bits (84), Expect = 0.019
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 64 PSPPPAIPYELPSSQKPGACAPKSPNQGASDEIPELQQQVPTGASSSLNK 113
P PPPA+ +P Q P AP+ P S P+LQQQ A++ L +
Sbjct: 62 PPPPPAM--NIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQ 109
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 35.0 bits (79), Expect = 0.073
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 66 PPPAIPYEL-PSSQKPGACAPKSPNQGASDEIPELQQQVPTGASSSLNKYPVLPSINRKN 124
PPP P PS Q+PG+ P S G++ P QQ P S+ + PV + + K
Sbjct: 509 PPPQQPGPAKPSPQQPGSTKPPSQQPGSAK--PSAQQPSPAKPSAQQSTKPVSQTGSGKP 566
Query: 125 LEEEAVETVAKKASS 139
L+ V AK+ S
Sbjct: 567 LQPPTVSPSAKQPPS 581
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 35.0 bits (79), Expect = 0.073
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 66 PPPAIPYEL-PSSQKPGACAPKSPNQGASDEIPELQQQVPTGASSSLNKYPVLPSINRKN 124
PPP P PS Q+PG+ P S G++ P QQ P S+ + PV + + K
Sbjct: 509 PPPQQPGPAKPSPQQPGSTKPPSQQPGSAK--PSAQQPSPAKPSAQQSTKPVSQTGSGKP 566
Query: 125 LEEEAVETVAKKASS 139
L+ V AK+ S
Sbjct: 567 LQPPTVSPSAKQPPS 581
>gi|42518068 trans-golgi network protein 2 [Homo sapiens]
Length = 437
Score = 34.7 bits (78), Expect = 0.096
Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 18/163 (11%)
Query: 37 IRPKSAKGRTRPSLQKSQGVEVCAHHIPSPPPAIPYELPSSQKPGACAPK-SPNQGASDE 95
+RP + T PSL + G +H P P P + PS A P+ +PN+ ++
Sbjct: 33 VRPSAGNVSTHPSLSQRPGGSTKSH----PEPQTPKDSPSKSSAEAQTPEDTPNKSGAEA 88
Query: 96 IPELQQQVPTGASSSLNKYPVLPSINRKNLEEEAV-ETVAKKASSLQLSSIRALYQDETG 154
+ +GA + K S ++ E + ++ +K LQ ++G
Sbjct: 89 KTQKDSSNKSGAEAKTQK----GSTSKSGSEAQTTKDSTSKSHPELQTPKDST---GKSG 141
Query: 155 TMKTSEEDSRARACAVERKFIVRTKKQGSSRAGNLEEPSDQEP 197
+ EDS R+ A +T+K S++G+ + + P
Sbjct: 142 AEAQTPEDSPNRSGAE-----AKTQKDSPSKSGSEAQTTKDVP 179
>gi|145580608 WD repeat domain 62 isoform 1 [Homo sapiens]
Length = 1523
Score = 34.3 bits (77), Expect = 0.12
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 33 NMHMIRPKSAKGRTRPSLQKSQGVEVCAHHIPSPPPAIPYELP---SSQKPGACAPKSPN 89
N+ + + G +P + GV V A P+P P L S+ +P AP+SP
Sbjct: 1296 NLRLTLSSACDGLLQPPVDTQPGVTVPAVSFPAPSPVEESALRLHGSAFRPSLPAPESPG 1355
Query: 90 QGA---SDEIPELQQQVPTGASSSL 111
A + ++PE + +P G +S L
Sbjct: 1356 LPAHPSNPQLPEARPGIPGGTASLL 1380
>gi|145580610 WD repeat domain 62 isoform 2 [Homo sapiens]
Length = 1518
Score = 34.3 bits (77), Expect = 0.12
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 33 NMHMIRPKSAKGRTRPSLQKSQGVEVCAHHIPSPPPAIPYELP---SSQKPGACAPKSPN 89
N+ + + G +P + GV V A P+P P L S+ +P AP+SP
Sbjct: 1291 NLRLTLSSACDGLLQPPVDTQPGVTVPAVSFPAPSPVEESALRLHGSAFRPSLPAPESPG 1350
Query: 90 QGA---SDEIPELQQQVPTGASSSL 111
A + ++PE + +P G +S L
Sbjct: 1351 LPAHPSNPQLPEARPGIPGGTASLL 1375
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 33.1 bits (74), Expect = 0.28
Identities = 39/175 (22%), Positives = 67/175 (38%), Gaps = 25/175 (14%)
Query: 2 ATEAPVNIAPPECSTVVSTAVDSLIWQPNSLNMHMIRPKSAKGRTRPSLQKSQGVEVCAH 61
+ + P + P +ST+ D + +P S R+R ++ + E
Sbjct: 1318 SVKTPETVVPTAPELQISTSTDQPVTP---------KPTSRTTRSRTNMSSVKNPESTVP 1368
Query: 62 HIPSPPPAIPYELPSSQKPGACAPKSPNQGASDEIPE-LQQQVPTGASSSLNKYPVLPS- 119
P PP+ E P + +P + A + +S + PE L P S+ PV P
Sbjct: 1369 IAPELPPSTSTEQPVTPEPTSRATRGRKNRSSGKTPETLVPTAPKLEPSTSTDQPVTPEP 1428
Query: 120 --------INRKNLEEEAVETVAKKASSLQLSSIRALYQDETGTMKTSEEDSRAR 166
NR ++ + ETV A LQ S+ D+ T + + + +R R
Sbjct: 1429 TSQATRGRTNRSSV--KTPETVVPTAPELQPST----STDQPVTPEPTSQATRGR 1477
>gi|87196343 PDZ domain containing 2 [Homo sapiens]
Length = 2839
Score = 33.1 bits (74), Expect = 0.28
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 22/155 (14%)
Query: 56 VEVCAHHIPSPPP---AIPYELPSSQKPGACAPKSP---NQGASDEIPELQQQVPTGASS 109
+E+ P PP + P + + PG PK+ ++ + E Q +P S
Sbjct: 2514 LEITPRRSPGPPAGGVSCPEKGGNRACPGGSGPKTSAAETPSSASDTGEAAQDLPFRRSW 2573
Query: 110 SLNKYPVLPSINRKNLEEEAVETVAKKASSLQLSSIRALYQDETGTMKTSEEDSRARACA 169
S+N +L S + + + +V K++ L L E +EED C
Sbjct: 2574 SVNLDQLLVSAGDQQRLQSVLSSVGSKSTILTLIQ-------EAKAQSENEED----VC- 2621
Query: 170 VERKFIVRTKKQGSSRAGNLEEPSDQEPRLLLAVR 204
FIV +K+GS ++ +D EP+ + R
Sbjct: 2622 ----FIVLNRKEGSGLGFSVAGGTDVEPKSITVHR 2652
>gi|45243501 BCL2-like 13 (apoptosis facilitator) [Homo sapiens]
Length = 485
Score = 32.7 bits (73), Expect = 0.36
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 20/164 (12%)
Query: 9 IAPPECSTVVSTAVDSLIWQPNSLNMHMIRPKSAKGRTRP-SLQKSQGVEVCAHHIPSPP 67
++PPE TV ++ WQ SL + + +S + P SL ++
Sbjct: 235 VSPPESPTVTTS------WQSESLPVSLSASQSWHTESLPVSLGPESWQQIAMD------ 282
Query: 68 PAIPYELPSSQKPGACAPKSPNQGASDEIPELQQQVPTGASSSLNKYPVLPSINRKNLEE 127
P E+ S GA N SD + +++VP G + VLP+ + L+E
Sbjct: 283 ---PEEVKSLDSNGAGEKSENNSSNSDIVHVEKEEVPEGMEEAAVASVVLPA---RELQE 336
Query: 128 EAVETVAKKASSLQLSSIRALYQDETGTMKTSEEDSRARACAVE 171
E A + +S+ + +T + T E+ S A + VE
Sbjct: 337 ALPEAPAPLLPHITATSLLGTREPDTEVI-TVEKSSPATSLFVE 379
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 32.3 bits (72), Expect = 0.47
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 64 PSPPPAIPYELPS-SQKPGACAPKSPNQGASDEIPELQQQVPTGASSSLNKYPVLPS 119
P PPP P P Q P A A P + P+ Q Q P G + + P +P+
Sbjct: 27 PQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPA 83
>gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens]
Length = 475
Score = 32.3 bits (72), Expect = 0.47
Identities = 37/155 (23%), Positives = 52/155 (33%), Gaps = 20/155 (12%)
Query: 51 QKSQGVEVCAHHIPSPPPAIPYELPSSQ-----------KPGACAPKSPNQGASDEIPEL 99
Q S + PSPP P P + PGA PKSP+Q L
Sbjct: 253 QPSDNAPAKGNKSPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQPTESPAGSL 312
Query: 100 QQQVPTGASSSLNKYPVLPSINRKNLEEEAVETVAKKASSLQLSSIRALYQDETGTMKTS 159
P+ A + +++ + E +AS + + A E G S
Sbjct: 313 PSGEPSAAEGTF-------AVSWPSQTAEPGPAQPAEASEVAGGTQPAAGAQEPGETAAS 365
Query: 160 EEDSRARACAVERKF--IVRTKKQGSSRAGNLEEP 192
E S + V F V +G S AG L+ P
Sbjct: 366 EAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLP 400
>gi|21536411 bridging integrator 1 isoform 6 [Homo sapiens]
Length = 482
Score = 32.3 bits (72), Expect = 0.47
Identities = 39/158 (24%), Positives = 59/158 (37%), Gaps = 19/158 (12%)
Query: 51 QKSQGVEVCAHHIPSPPPAIPYELPSSQ-----------KPGACAPKSPNQ-GASDEIPE 98
Q S + PSPP P P + PGA PKSP+Q +P
Sbjct: 253 QPSDNAPAKGNKSPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPP 312
Query: 99 LQQQVPTGASSSLNKYPVLPSINRKNLEEEAVETVAKKASSLQLS--SIRALYQDETGTM 156
+ P S + + +L + E +V T ++ A + +++ + A E G
Sbjct: 313 PPKHTP---SKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGET 369
Query: 157 KTSEEDSRARACAVERKF--IVRTKKQGSSRAGNLEEP 192
SE S + V F V +G S AG L+ P
Sbjct: 370 AASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLP 407
>gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens]
Length = 506
Score = 32.3 bits (72), Expect = 0.47
Identities = 37/155 (23%), Positives = 52/155 (33%), Gaps = 20/155 (12%)
Query: 51 QKSQGVEVCAHHIPSPPPAIPYELPSSQ-----------KPGACAPKSPNQGASDEIPEL 99
Q S + PSPP P P + PGA PKSP+Q L
Sbjct: 284 QPSDNAPAKGNKSPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQPTESPAGSL 343
Query: 100 QQQVPTGASSSLNKYPVLPSINRKNLEEEAVETVAKKASSLQLSSIRALYQDETGTMKTS 159
P+ A + +++ + E +AS + + A E G S
Sbjct: 344 PSGEPSAAEGTF-------AVSWPSQTAEPGPAQPAEASEVAGGTQPAAGAQEPGETAAS 396
Query: 160 EEDSRARACAVERKF--IVRTKKQGSSRAGNLEEP 192
E S + V F V +G S AG L+ P
Sbjct: 397 EAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLP 431
>gi|46852390 coiled-coil domain containing 6 [Homo sapiens]
Length = 474
Score = 32.3 bits (72), Expect = 0.47
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 14/80 (17%)
Query: 30 NSLNMHMIRPKSAKGRTRPSLQKSQGVEVCAHHIPSPPPAIPYELPSSQKPGACAPKSPN 89
NS +H+ ++ G TRPS ++S + P+PPP+ P++Q P P P
Sbjct: 394 NSPGLHVQHMGTSHGITRPSPRRSNSPDKFKR--PTPPPS-----PNTQTPVQPPPPPPP 446
Query: 90 QGASDEIPELQQQVPTGASS 109
P +Q VP+ A+S
Sbjct: 447 -------PPMQPTVPSAATS 459
>gi|109255230 centrosomal protein 170kDa isoform beta [Homo sapiens]
Length = 1486
Score = 32.3 bits (72), Expect = 0.47
Identities = 45/212 (21%), Positives = 82/212 (38%), Gaps = 40/212 (18%)
Query: 11 PPECSTVVSTAVDSLIWQPNSLNM---HMIRPKSAKGRTRPSLQKSQGVEVCAHHIPSPP 67
PPE ++ ST+ + Q S +++ ++ KG + KS V + I P
Sbjct: 689 PPEKNSGHSTSKGDRVAQSESKRRKAEEILKSQTPKGGDKKESSKSL-VRQGSFTIEKPS 747
Query: 68 PAIPYEL-PSSQKPGACAPKSPNQGASDEIPELQQQVPTGAS------------------ 108
P IP EL P K + P S ++ I E + + +S
Sbjct: 748 PNIPIELIPHINKQTSSTPSSLALTSASRIRERSESLDPDSSMDTTLILKDTEAVMAFLE 807
Query: 109 ------SSLNKYPVLPSINRKNL--EEEAVETVA---------KKASSLQLSSIRALYQD 151
+ ++ P PS NR N E V+T + ++ S+ + S +LY+D
Sbjct: 808 AKLREDNKTDEGPDTPSYNRDNSISPESDVDTASTISLVTGETERKSTQKRKSFTSLYKD 867
Query: 152 ETGTMKTSEEDSRARACAVERKFIVRTKKQGS 183
T S++ +++ + K +TK + +
Sbjct: 868 RCSTGSPSKDVTKSSSSGAREKMEKKTKSRST 899
>gi|109255228 centrosomal protein 170kDa isoform alpha [Homo
sapiens]
Length = 1584
Score = 32.3 bits (72), Expect = 0.47
Identities = 45/212 (21%), Positives = 82/212 (38%), Gaps = 40/212 (18%)
Query: 11 PPECSTVVSTAVDSLIWQPNSLNM---HMIRPKSAKGRTRPSLQKSQGVEVCAHHIPSPP 67
PPE ++ ST+ + Q S +++ ++ KG + KS V + I P
Sbjct: 787 PPEKNSGHSTSKGDRVAQSESKRRKAEEILKSQTPKGGDKKESSKSL-VRQGSFTIEKPS 845
Query: 68 PAIPYEL-PSSQKPGACAPKSPNQGASDEIPELQQQVPTGAS------------------ 108
P IP EL P K + P S ++ I E + + +S
Sbjct: 846 PNIPIELIPHINKQTSSTPSSLALTSASRIRERSESLDPDSSMDTTLILKDTEAVMAFLE 905
Query: 109 ------SSLNKYPVLPSINRKNL--EEEAVETVA---------KKASSLQLSSIRALYQD 151
+ ++ P PS NR N E V+T + ++ S+ + S +LY+D
Sbjct: 906 AKLREDNKTDEGPDTPSYNRDNSISPESDVDTASTISLVTGETERKSTQKRKSFTSLYKD 965
Query: 152 ETGTMKTSEEDSRARACAVERKFIVRTKKQGS 183
T S++ +++ + K +TK + +
Sbjct: 966 RCSTGSPSKDVTKSSSSGAREKMEKKTKSRST 997
>gi|109255232 centrosomal protein 170kDa isoform gamma [Homo
sapiens]
Length = 1460
Score = 32.3 bits (72), Expect = 0.47
Identities = 45/212 (21%), Positives = 82/212 (38%), Gaps = 40/212 (18%)
Query: 11 PPECSTVVSTAVDSLIWQPNSLNM---HMIRPKSAKGRTRPSLQKSQGVEVCAHHIPSPP 67
PPE ++ ST+ + Q S +++ ++ KG + KS V + I P
Sbjct: 689 PPEKNSGHSTSKGDRVAQSESKRRKAEEILKSQTPKGGDKKESSKSL-VRQGSFTIEKPS 747
Query: 68 PAIPYEL-PSSQKPGACAPKSPNQGASDEIPELQQQVPTGAS------------------ 108
P IP EL P K + P S ++ I E + + +S
Sbjct: 748 PNIPIELIPHINKQTSSTPSSLALTSASRIRERSESLDPDSSMDTTLILKDTEAVMAFLE 807
Query: 109 ------SSLNKYPVLPSINRKNL--EEEAVETVA---------KKASSLQLSSIRALYQD 151
+ ++ P PS NR N E V+T + ++ S+ + S +LY+D
Sbjct: 808 AKLREDNKTDEGPDTPSYNRDNSISPESDVDTASTISLVTGETERKSTQKRKSFTSLYKD 867
Query: 152 ETGTMKTSEEDSRARACAVERKFIVRTKKQGS 183
T S++ +++ + K +TK + +
Sbjct: 868 RCSTGSPSKDVTKSSSSGAREKMEKKTKSRST 899
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
sapiens]
Length = 1293
Score = 32.0 bits (71), Expect = 0.62
Identities = 31/141 (21%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 122 RKNLEEEAVETVAKKASSLQLSSIRALYQDETGTMKTSEEDSRARACAVER-KFIVRTKK 180
RK EE A ++ + +L R ++E ++ EE+ + + V+R K ++R ++
Sbjct: 835 RKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQ 894
Query: 181 QGSSRAGNLEEPSDQEPRLLLAVRSPTGQRFVRHFRPTD-DLQTIVAVAEQKNKTSYRHC 239
Q L++ Q+ + L ++ P+ + + T Q +++AE + R
Sbjct: 895 QQQEALRRLQQ--QQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSLAEIQKLEEERER 952
Query: 240 SIETMEVPRRRFSDLTKSLQE 260
+ E RR+ +L K+LQ+
Sbjct: 953 QLR--EEQRRQQRELMKALQQ 971
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
sapiens]
Length = 1320
Score = 32.0 bits (71), Expect = 0.62
Identities = 31/141 (21%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 122 RKNLEEEAVETVAKKASSLQLSSIRALYQDETGTMKTSEEDSRARACAVER-KFIVRTKK 180
RK EE A ++ + +L R ++E ++ EE+ + + V+R K ++R ++
Sbjct: 862 RKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQ 921
Query: 181 QGSSRAGNLEEPSDQEPRLLLAVRSPTGQRFVRHFRPTD-DLQTIVAVAEQKNKTSYRHC 239
Q L++ Q+ + L ++ P+ + + T Q +++AE + R
Sbjct: 922 QQQEALRRLQQ--QQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSLAEIQKLEEERER 979
Query: 240 SIETMEVPRRRFSDLTKSLQE 260
+ E RR+ +L K+LQ+
Sbjct: 980 QLR--EEQRRQQRELMKALQQ 998
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 32.0 bits (71), Expect = 0.62
Identities = 31/141 (21%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 122 RKNLEEEAVETVAKKASSLQLSSIRALYQDETGTMKTSEEDSRARACAVER-KFIVRTKK 180
RK EE A ++ + +L R ++E ++ EE+ + + V+R K ++R ++
Sbjct: 841 RKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQ 900
Query: 181 QGSSRAGNLEEPSDQEPRLLLAVRSPTGQRFVRHFRPTD-DLQTIVAVAEQKNKTSYRHC 239
Q L++ Q+ + L ++ P+ + + T Q +++AE + R
Sbjct: 901 QQQEALRRLQQ--QQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSLAEIQKLEEERER 958
Query: 240 SIETMEVPRRRFSDLTKSLQE 260
+ E RR+ +L K+LQ+
Sbjct: 959 QLR--EEQRRQQRELMKALQQ 977
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 32.0 bits (71), Expect = 0.62
Identities = 31/141 (21%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 122 RKNLEEEAVETVAKKASSLQLSSIRALYQDETGTMKTSEEDSRARACAVER-KFIVRTKK 180
RK EE A ++ + +L R ++E ++ EE+ + + V+R K ++R ++
Sbjct: 841 RKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQRQ 900
Query: 181 QGSSRAGNLEEPSDQEPRLLLAVRSPTGQRFVRHFRPTD-DLQTIVAVAEQKNKTSYRHC 239
Q L++ Q+ + L ++ P+ + + T Q +++AE + R
Sbjct: 901 QQQEALRRLQQ--QQQQQQLAQMKLPSSSTWGQQSNTTACQSQATLSLAEIQKLEEERER 958
Query: 240 SIETMEVPRRRFSDLTKSLQE 260
+ E RR+ +L K+LQ+
Sbjct: 959 QLR--EEQRRQQRELMKALQQ 977
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 32.0 bits (71), Expect = 0.62
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 64 PSPPPAIPYELPSSQKPGACAPKSPNQGASDEIPELQQQVPTGASSSLNKYPVLPSI 120
P+PPPA+P ELP+ P + +P + PE Q P S+ P++
Sbjct: 518 PAPPPAVPKELPAPPAPPPASAPTP-----ETEPEEPAQAPPAQSTPTPGVAAAPTL 569
Score = 29.3 bits (64), Expect = 4.0
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 65 SPPPAIPYELPSSQKPGACAPKSPNQGASDEIPELQQQVPTG 106
SP A+P E P +P P +P+ G E+P +Q +P G
Sbjct: 1691 SPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPR-EQPLPPG 1731
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 32.0 bits (71), Expect = 0.62
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 32 LNMHMIRPKSAKGRTRPSLQKSQGVEV---------CAHHIPSPPPAIPYELPSSQKPGA 82
+N+ PK + RP SQ VE H+ +PPP P + P Q P
Sbjct: 954 INLDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHV-APPPQPPQQQPQPQLPQQ 1012
Query: 83 CAPKSPNQGASDEIPELQQQV 103
P P+Q S + + QQQ+
Sbjct: 1013 QQPPPPSQPQSQQQQQQQQQM 1033
>gi|21536407 bridging integrator 1 isoform 4 [Homo sapiens]
Length = 497
Score = 31.6 bits (70), Expect = 0.81
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 19/145 (13%)
Query: 64 PSPPPAIPYELPSSQ-----------KPGACAPKSPNQ-GASDEIPELQQQVPTGASSSL 111
PSPP P P + PGA PKSP+Q +P + P S +
Sbjct: 281 PSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTP---SKEV 337
Query: 112 NKYPVLPSINRKNLEEEAVETVAKKASSLQLS--SIRALYQDETGTMKTSEEDSRARACA 169
+ +L + E +V T ++ A + +++ + A E G SE S +
Sbjct: 338 KQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAV 397
Query: 170 VERKF--IVRTKKQGSSRAGNLEEP 192
V F V +G S AG L+ P
Sbjct: 398 VVETFPATVNGTVEGGSGAGRLDLP 422
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 31.6 bits (70), Expect = 0.81
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 21/98 (21%)
Query: 15 STVVSTAVDSLIW---QPNSLNM---HMIRPKSAKGRTRPSLQKSQGVEVCAHHI----- 63
S+ S + +W +P S+ + H + P A + PS+Q S+ + +H +
Sbjct: 12 SSAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQPASHPVASNQS 71
Query: 64 --PSPPPAIPYELPSS--------QKPGACAPKSPNQG 91
P+ A+ +E P + PGA P+SP G
Sbjct: 72 KEPAESAAVAHERPPGGTGSADPERPPGATCPESPGPG 109
>gi|113865921 hypothetical protein LOC441457 [Homo sapiens]
Length = 492
Score = 31.6 bits (70), Expect = 0.81
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 9 IAPPECSTVVSTAVDSLIWQ-PNSLNMHMIRPK-----SAKGRTRPSLQKSQGVEVC--- 59
+ PP+ T++ T L+WQ P +L ++ P +A G S Q G + C
Sbjct: 92 VKPPQAQTLILTQAP-LVWQAPGTLCGGVMCPPPLLLAAAPGVPVTSAQVVGGTQACEGG 150
Query: 60 -AHHIPSPPPAIPYELPSSQKPGACAPKSPNQGASDE 95
+H +P PPP ++ PG P QGA E
Sbjct: 151 WSHGLPLPPPPPAAQVAPIVSPGNAGPWP--QGAHGE 185
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.126 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,613,166
Number of Sequences: 37866
Number of extensions: 568243
Number of successful extensions: 2866
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 156
Number of HSP's that attempted gapping in prelim test: 2750
Number of HSP's gapped (non-prelim): 291
length of query: 280
length of database: 18,247,518
effective HSP length: 101
effective length of query: 179
effective length of database: 14,423,052
effective search space: 2581726308
effective search space used: 2581726308
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.