Guide to the Human Genome
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Name: REG4 Sequence: fasta or formatted (134aa) NCBI GI: 226823235
Description:

regenerating islet-derived family, member 4 isoform 2

Referenced in:

Pancreas and Insulin

Other entries for this name:
alt prot [158aa] regenerating islet-derived family, member 4 isoform 1
alt prot [158aa] regenerating islet-derived family, member 4 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         10           1
 C cysteine            3.7          5           1
 D aspartate           4.5          6           1
 E glutamate           5.2          7           2
 F phenylalanine       3.7          5           1
 G glycine             7.5         10           1
 H histidine           2.2          3           1
 I isoleucine          3.0          4           2
 K lysine              4.5          6           1
 L leucine            11.9         16           5
 M methionine          2.2          3           1
 N asparagine          3.7          5           1
 P proline             6.0          8           1
 Q glutamine           3.0          4           1
 R arginine            6.0          8           1
 S serine             10.4         14           2
 T threonine           3.0          4           1
 V valine              5.2          7           1
 W tryptophan          3.7          5           1
 Y tyrosine            3.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   regenerating islet-derived family, member 4 isoform... 
REG4                  0.365   regenerating islet-derived family, member 4 isoform...
REG4                  0.365   regenerating islet-derived family, member 4 isoform ...
BCAN                  0.035   brevican isoform 1 
ACAN                  0.027   aggrecan isoform 2 precursor 
KLRK1                 0.027   NKG2-D type II integral membrane protein 
NCAN                  0.027   chondroitin sulfate proteoglycan 3 
GDAP1L1               0.023   ganglioside-induced differentiation-associated prote...
CLEC1A                0.023   C-type lectin-like receptor-1 
CLEC1B                0.019   C-type lectin domain family 1, member B isoform b [...
CLEC1B                0.019   C-type lectin domain family 1, member B isoform a [...
ASGR1                 0.019   asialoglycoprotein receptor 1 
ACAN                  0.019   aggrecan isoform 1 precursor 
CLEC7A                0.019   dendritic cell-associated C-type lectin 1 isoform d ...
CLEC7A                0.019   dendritic cell-associated C-type lectin 1 isoform b ...
OTUD6A                0.019   OTU domain containing 6A 
VCAN                  0.019   versican isoform 2 
VCAN                  0.019   versican isoform 1 
C4orf44               0.015   hypothetical protein LOC345222 isoform a 
C4orf44               0.015   hypothetical protein LOC345222 isoform b 
NUP155                0.015   nucleoporin 155kDa isoform 2 
NUP155                0.015   nucleoporin 155kDa isoform 1 
HECW2                 0.015   HECT, C2 and WW domain containing E3 ubiquitin prote...
KLRF1                 0.012   killer cell lectin-like receptor subfamily F, member ...
PLA2R1                0.012   phospholipase A2 receptor 1 isoform 2 precursor [Hom...
PLA2R1                0.012   phospholipase A2 receptor 1 isoform 1 precursor [Hom...
OLR1                  0.012   oxidized low density lipoprotein (lectin-like) recept...
ASGR2                 0.012   asialoglycoprotein receptor 2 isoform c 
ASGR2                 0.012   asialoglycoprotein receptor 2 isoform b 
ASGR2                 0.012   asialoglycoprotein receptor 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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