Guide to the Human Genome
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Name: SLC35F3 Sequence: fasta or formatted (490aa) NCBI GI: 27735127
Description:

solute carrier family 35, member F3

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         41           2
 C cysteine            2.4         12           2
 D aspartate           3.3         16           2
 E glutamate           3.9         19           2
 F phenylalanine       6.5         32           2
 G glycine             6.9         34           2
 H histidine           1.0          5           1
 I isoleucine          7.3         36           4
 K lysine              5.3         26           2
 L leucine            11.4         56           5
 M methionine          1.4          7           2
 N asparagine          2.7         13           1
 P proline             4.5         22           1
 Q glutamine           2.0         10           1
 R arginine            6.3         31           2
 S serine              7.8         38           2
 T threonine           4.9         24           2
 V valine              8.2         40           2
 W tryptophan          2.7         13           1
 Y tyrosine            3.1         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 35, member F3 
SLC35F4               0.443   solute carrier family 35, member F4 
SLC35F5               0.035   solute carrier family 35, member F5 
SLC35F2               0.034   solute carrier family 35, member F2 
SLC35F1               0.024   solute carrier family 35, member F1 
TMEM20                0.015   transmembrane protein 20 isoform 2 
TMEM20                0.011   transmembrane protein 20 isoform 1 
C15orf39              0.009   hypothetical protein LOC56905 
FZD4                  0.008   frizzled 4 
ABCC10                0.006   ATP-binding cassette, sub-family C, member 10 
MAS1                  0.005   MAS1 oncogene 
LPAR4                 0.005   lysophosphatidic acid receptor 4 
DDX4                  0.005   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...
DDX4                  0.005   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [...
DDX4                  0.005   DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ...
SLC35B3               0.005   solute carrier family 35, member B3 
SLC35B3               0.005   solute carrier family 35, member B3 
SLC35B3               0.005   solute carrier family 35, member B3 
SLC2A8                0.004   solute carrier family 2 (facilitated glucose transpo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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