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Search of human proteins with 115511057
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|115511057 hypothetical protein LOC256643 [Homo sapiens]
(682 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|115511057 hypothetical protein LOC256643 [Homo sapiens] 1422 0.0
gi|167234419 thyroid hormone receptor associated protein 3 [Homo... 105 2e-22
gi|117938251 BCL2-associated transcription factor 1 isoform 2 [H... 104 2e-22
gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Hom... 104 2e-22
gi|117938254 BCL2-associated transcription factor 1 isoform 3 [H... 103 4e-22
gi|239756568 PREDICTED: similar to BCL2-associated transcription... 101 3e-21
gi|169218320 PREDICTED: similar to BCL2-associated transcription... 101 3e-21
gi|87299628 biorientation of chromosomes in cell division 1-like... 61 4e-09
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 50 9e-06
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 48 3e-05
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 44 5e-04
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 44 5e-04
gi|244790020 synaptotagmin-like 2 isoform i [Homo sapiens] 44 6e-04
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 43 8e-04
gi|4504487 histidine rich calcium binding protein precursor [Hom... 42 0.002
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 41 0.004
gi|15011902 synaptotagmin-like 2 isoform a [Homo sapiens] 40 0.007
gi|244790013 synaptotagmin-like 2 isoform g [Homo sapiens] 40 0.007
gi|60097902 filaggrin [Homo sapiens] 39 0.016
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 39 0.016
gi|34098946 nuclease sensitive element binding protein 1 [Homo s... 38 0.027
gi|4503351 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo... 38 0.035
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 38 0.035
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] 37 0.060
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 37 0.079
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 37 0.079
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 37 0.079
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 36 0.10
gi|14149807 coiled-coil domain containing 55 isoform 1 [Homo sap... 36 0.10
gi|52426743 cisplatin resistance-associated overexpressed protei... 36 0.10
>gi|115511057 hypothetical protein LOC256643 [Homo sapiens]
Length = 682
Score = 1422 bits (3680), Expect = 0.0
Identities = 682/682 (100%), Positives = 682/682 (100%)
Query: 1 MARSRSRSPRWKHRSLSPVPRNAEHYKQRHSHGHYGCEYRKDPKRPVAWRMDSEKHGQSK 60
MARSRSRSPRWKHRSLSPVPRNAEHYKQRHSHGHYGCEYRKDPKRPVAWRMDSEKHGQSK
Sbjct: 1 MARSRSRSPRWKHRSLSPVPRNAEHYKQRHSHGHYGCEYRKDPKRPVAWRMDSEKHGQSK 60
Query: 61 PRIPSRGNIYYQSYEHRSPSPNIRNSLENVYMYKPHRGYSPGRGDSNRRAQYMPKYSEGI 120
PRIPSRGNIYYQSYEHRSPSPNIRNSLENVYMYKPHRGYSPGRGDSNRRAQYMPKYSEGI
Sbjct: 61 PRIPSRGNIYYQSYEHRSPSPNIRNSLENVYMYKPHRGYSPGRGDSNRRAQYMPKYSEGI 120
Query: 121 PYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEGKWHEDELRHQRIQ 180
PYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEGKWHEDELRHQRIQ
Sbjct: 121 PYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEGKWHEDELRHQRIQ 180
Query: 181 EEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESREPARNPKWKP 240
EEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESREPARNPKWKP
Sbjct: 181 EEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESREPARNPKWKP 240
Query: 241 EHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLLDGDQDFSDGRT 300
EHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLLDGDQDFSDGRT
Sbjct: 241 EHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLLDGDQDFSDGRT 300
Query: 301 QKYCKEEDRKYSFQKGPLNRELDCFNTGRGRETQDGQVKEPFKPSKKDSIACTYSNKNDV 360
QKYCKEEDRKYSFQKGPLNRELDCFNTGRGRETQDGQVKEPFKPSKKDSIACTYSNKNDV
Sbjct: 301 QKYCKEEDRKYSFQKGPLNRELDCFNTGRGRETQDGQVKEPFKPSKKDSIACTYSNKNDV 360
Query: 361 DLRSSNDKWKEKIKKEGDCRKESNSSSNQLDKSQKLPDVKPSPINLRKKSLTVKVDVKKT 420
DLRSSNDKWKEKIKKEGDCRKESNSSSNQLDKSQKLPDVKPSPINLRKKSLTVKVDVKKT
Sbjct: 361 DLRSSNDKWKEKIKKEGDCRKESNSSSNQLDKSQKLPDVKPSPINLRKKSLTVKVDVKKT 420
Query: 421 VDTFRVASSYSTERQMSHDLVAVGRKSENFHPVFEHLDSTQNTENKPTGEFAQEIITIIH 480
VDTFRVASSYSTERQMSHDLVAVGRKSENFHPVFEHLDSTQNTENKPTGEFAQEIITIIH
Sbjct: 421 VDTFRVASSYSTERQMSHDLVAVGRKSENFHPVFEHLDSTQNTENKPTGEFAQEIITIIH 480
Query: 481 QVKANYFPSPGITLHERFSTMQDIHKADVNEIPLNSDPEIHRRIDMSLAELQSKQAVIYE 540
QVKANYFPSPGITLHERFSTMQDIHKADVNEIPLNSDPEIHRRIDMSLAELQSKQAVIYE
Sbjct: 481 QVKANYFPSPGITLHERFSTMQDIHKADVNEIPLNSDPEIHRRIDMSLAELQSKQAVIYE 540
Query: 541 SEQTLIKIIDPNDLRHDIERRRKERLQNEDEHIFHIASAAERDDQNSSFSKNYTTQRKDI 600
SEQTLIKIIDPNDLRHDIERRRKERLQNEDEHIFHIASAAERDDQNSSFSKNYTTQRKDI
Sbjct: 541 SEQTLIKIIDPNDLRHDIERRRKERLQNEDEHIFHIASAAERDDQNSSFSKNYTTQRKDI 600
Query: 601 ITHKPFEVEGNHRNTRVRPFKSNFRGGRCQPNYKSGLVQKSLYIQAKYQRLRFTGPRGFI 660
ITHKPFEVEGNHRNTRVRPFKSNFRGGRCQPNYKSGLVQKSLYIQAKYQRLRFTGPRGFI
Sbjct: 601 ITHKPFEVEGNHRNTRVRPFKSNFRGGRCQPNYKSGLVQKSLYIQAKYQRLRFTGPRGFI 660
Query: 661 THKFRERLMRKKKEYTDVATGI 682
THKFRERLMRKKKEYTDVATGI
Sbjct: 661 THKFRERLMRKKKEYTDVATGI 682
>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
sapiens]
Length = 955
Score = 105 bits (261), Expect = 2e-22
Identities = 81/266 (30%), Positives = 138/266 (51%), Gaps = 23/266 (8%)
Query: 381 KESNSSSNQLDKSQKLPDVKPSPINLRKKSLTVKVDVKKTVDTFRVASSYSTERQMSHDL 440
++++ S ++L P K S R+ + V++D D R + + ER++ DL
Sbjct: 539 RKTSESRDKLGAKGDFPTGKSSFSITREAQVNVRMD-SFDEDLARPSGLLAQERKLCRDL 597
Query: 441 VAVGRKSENFHPVFEHLDSTQNTENKPTGEFAQEIITIIHQVKANYFPSPGITLHERFST 500
V +K + F +F+H+ S Q+ + P+ FAQ I+TI+H VK ++F S G+TLHERF+
Sbjct: 598 VHSNKKEQEFRSIFQHIQSAQS-QRSPSELFAQHIVTIVHHVKEHHFGSSGMTLHERFT- 655
Query: 501 MQDIHKADVNEIPLN-SDPEIHRRIDMSLA----------ELQSKQAVIYESEQTLIKII 549
+ + + E N PEIHRRID+S + E++S + Y++E
Sbjct: 656 -KYLKRGTEQEAAKNKKSPEIHRRIDISPSTFRKHGLAHDEMKSPREPGYKAEGKYKD-- 712
Query: 550 DPNDLRHDIERRRKERLQNEDEHIFHIASAAERDDQNSSFSKNYTTQRKDIITHKPFEVE 609
DP DLR DIERR+K +++ + S D ++SS S+ + ++ + THK + +
Sbjct: 713 DPVDLRLDIERRKK----HKERDLKRGKSRESVDSRDSSHSRERSAEKTE-KTHKGSKKQ 767
Query: 610 GNHRNTRVRPFKSNFRGGRCQPNYKS 635
HR R R +S+ + +YK+
Sbjct: 768 KKHRRARDRS-RSSSSSSQSSHSYKA 792
>gi|117938251 BCL2-associated transcription factor 1 isoform 2 [Homo
sapiens]
Length = 869
Score = 104 bits (260), Expect = 2e-22
Identities = 110/448 (24%), Positives = 193/448 (43%), Gaps = 55/448 (12%)
Query: 191 GSEDFETRSSFQKRYPEDRD---FRKYGHTSKRPKDVERYESREPAR-NPKWKPEHSLPP 246
G ++ F KR+ ++ G+T R K+ + + E R +W+ + +L
Sbjct: 324 GDQETAKTGKFLKRFTDEESRVFLLDRGNT--RDKEASKEKGSEKGRAEGEWEDQEALDY 381
Query: 247 YQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLL-DGDQDFSDGRTQKYCK 305
+ + G Q + +E + E + DYR R +L D + F+ + + +
Sbjct: 382 FSDKES----GKQKFNDSEGDDTEETE------DYRQFRKSVLADQGKSFATA-SHRNTE 430
Query: 306 EEDRKYSFQ---KGPLNRELDCFNTGRGRETQD--------GQVKEPFKPSKKDSIACTY 354
EE KY + KG NRE D F + + ++ K+ K K+S T
Sbjct: 431 EEGLKYKSKVSLKG--NRESDGFREEKNYKLKETGYVVERPSTTKDKHKEEDKNSERITV 488
Query: 355 SNKNDVDLRSSNDKWKEKIKKEGDCRKESNSSSNQLDKSQKLPDVKPSPINLRKKSLTVK 414
+ + ++K K+ K ++ + + +K + + + +K
Sbjct: 489 KKETQSPEQVKSEKLKDLFDYSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLK 548
Query: 415 VDVKKTVDTFRVASSYSTERQMSHDLVAVGRKSENFHPVFEHLDSTQNTENKPTGE-FAQ 473
+ D+ R AS + +R ++ LV +K + F +F+H+ Q +K T E F Q
Sbjct: 549 MAPVPLDDSNRPAS-LTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQ--ASKSTSESFIQ 605
Query: 474 EIITIIHQVKANYFPSPGITLHERFSTMQDIHKADVNEIPLNSDPEIHRRIDMSLAELQ- 532
I++++H VK YF S +TL+ERF++ Q KA PEIHRRID+S + L+
Sbjct: 606 HIVSLVHHVKEQYFKSAAMTLNERFTSYQ---KATEEHSTRQKSPEIHRRIDISPSTLRK 662
Query: 533 -----SKQAVIYESEQTLIKII--DPNDLRHDIERRRKERLQNEDEHIFHIASAAERDDQ 585
++ V E Q K + D DLRHDI+RRRKER + + + +
Sbjct: 663 HTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGD---------SKGSR 713
Query: 586 NSSFSKNYTTQRKDIITHKPFEVEGNHR 613
SS S+ KD +K ++ + H+
Sbjct: 714 ESSGSRKQEKTPKDYKEYKSYKDDSKHK 741
Score = 36.6 bits (83), Expect = 0.079
Identities = 107/566 (18%), Positives = 196/566 (34%), Gaps = 91/566 (16%)
Query: 53 SEKHGQSKPRIPSRGNIYYQSYEHRSPSPNIRNSLENVY-------------MYKPH--- 96
S+ QS R SR + + Y RS + + S + +Y M +P+
Sbjct: 13 SKSRSQSSSRSRSRSHSRKKRYRSRSRTYSRSRSRDRMYSRDYRRDYRNNRGMRRPYGYR 72
Query: 97 ---RGYSPGRGDSNRRAQYMPKYS---EGIPYKEHERNSYPQKVQGGHSPDDHRVRGSGK 150
RGY G G R Y P ++ P + R+ P++ R R S +
Sbjct: 73 GRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYR 132
Query: 151 GGKPPQRSIADSFRFEGKWHEDELRHQRIQEEKYSQSTRRGSEDFETRSSFQKRYPED-- 208
+ P+ S S R + + + +R +EK ++ ++ S + P+D
Sbjct: 133 SSRSPRSS---SSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTF 189
Query: 209 -----RDFRKYGHTSKRPKDV----ERYES--REP------ARNPKWKPEHSLPPYQEDT 251
++ +S D+ Y++ R P A P S P
Sbjct: 190 EHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTV 249
Query: 252 DQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLLDGDQDFSDGRTQKYCKEEDRKY 311
P + H+ + PE S + V +G +S + R+
Sbjct: 250 HSAKNTPSQHSHSIQHSPERSGSGSVG-----------NGSSRYSPSQNSPIHHIPSRRS 298
Query: 312 SFQK-GPLNRELDCFNTGRGRETQDGQVKEPFKPSK-------KDSIACTYSNKNDVDLR 363
+ P N D + GR DG +E K K ++S N D
Sbjct: 299 PAKTIAPQNAPRD-ESRGRSSFYPDGGDQETAKTGKFLKRFTDEESRVFLLDRGNTRDKE 357
Query: 364 SSNDKWKEKIKKEGDCRKE------SNSSSNQLDKSQKLPDVKPSPINLRKKSLTVKVDV 417
+S +K EK + EG+ + S+ S + + D + R+ +V D
Sbjct: 358 ASKEKGSEKGRAEGEWEDQEALDYFSDKESGKQKFNDSEGDDTEETEDYRQFRKSVLADQ 417
Query: 418 KKTVDTFRVASSYSTERQ----MSHDLVAVGRKSENFHPVFEHLDSTQNTENKPTGEFAQ 473
K +F AS +TE + S + R+S+ F +N + K TG +
Sbjct: 418 GK---SFATASHRNTEEEGLKYKSKVSLKGNRESDGFR-------EEKNYKLKETGYVVE 467
Query: 474 EIITIIHQVKANYFPSPGITLHERFSTMQDIHKADVNEIPLNSDPEIHRRIDMSLAELQS 533
T + K S IT+ + + + + + ++ + P +H+ +D
Sbjct: 468 RPSTTKDKHKEEDKNSERITVKKETQSPEQVKSEKLKDL-FDYSPPLHKNLD------AR 520
Query: 534 KQAVIYESEQTLIKIIDPNDLRHDIE 559
+++ E IK+I + R +++
Sbjct: 521 EKSTFREESPLRIKMIASDSHRPEVK 546
>gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Homo
sapiens]
Length = 920
Score = 104 bits (260), Expect = 2e-22
Identities = 110/448 (24%), Positives = 193/448 (43%), Gaps = 55/448 (12%)
Query: 191 GSEDFETRSSFQKRYPEDRD---FRKYGHTSKRPKDVERYESREPAR-NPKWKPEHSLPP 246
G ++ F KR+ ++ G+T R K+ + + E R +W+ + +L
Sbjct: 326 GDQETAKTGKFLKRFTDEESRVFLLDRGNT--RDKEASKEKGSEKGRAEGEWEDQEALDY 383
Query: 247 YQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLL-DGDQDFSDGRTQKYCK 305
+ + G Q + +E + E + DYR R +L D + F+ + + +
Sbjct: 384 FSDKES----GKQKFNDSEGDDTEETE------DYRQFRKSVLADQGKSFATA-SHRNTE 432
Query: 306 EEDRKYSFQ---KGPLNRELDCFNTGRGRETQD--------GQVKEPFKPSKKDSIACTY 354
EE KY + KG NRE D F + + ++ K+ K K+S T
Sbjct: 433 EEGLKYKSKVSLKG--NRESDGFREEKNYKLKETGYVVERPSTTKDKHKEEDKNSERITV 490
Query: 355 SNKNDVDLRSSNDKWKEKIKKEGDCRKESNSSSNQLDKSQKLPDVKPSPINLRKKSLTVK 414
+ + ++K K+ K ++ + + +K + + + +K
Sbjct: 491 KKETQSPEQVKSEKLKDLFDYSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLK 550
Query: 415 VDVKKTVDTFRVASSYSTERQMSHDLVAVGRKSENFHPVFEHLDSTQNTENKPTGE-FAQ 473
+ D+ R AS + +R ++ LV +K + F +F+H+ Q +K T E F Q
Sbjct: 551 MAPVPLDDSNRPAS-LTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQ--ASKSTSESFIQ 607
Query: 474 EIITIIHQVKANYFPSPGITLHERFSTMQDIHKADVNEIPLNSDPEIHRRIDMSLAELQ- 532
I++++H VK YF S +TL+ERF++ Q KA PEIHRRID+S + L+
Sbjct: 608 HIVSLVHHVKEQYFKSAAMTLNERFTSYQ---KATEEHSTRQKSPEIHRRIDISPSTLRK 664
Query: 533 -----SKQAVIYESEQTLIKII--DPNDLRHDIERRRKERLQNEDEHIFHIASAAERDDQ 585
++ V E Q K + D DLRHDI+RRRKER + + + +
Sbjct: 665 HTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGD---------SKGSR 715
Query: 586 NSSFSKNYTTQRKDIITHKPFEVEGNHR 613
SS S+ KD +K ++ + H+
Sbjct: 716 ESSGSRKQEKTPKDYKEYKSYKDDSKHK 743
>gi|117938254 BCL2-associated transcription factor 1 isoform 3 [Homo
sapiens]
Length = 747
Score = 103 bits (258), Expect = 4e-22
Identities = 154/644 (23%), Positives = 255/644 (39%), Gaps = 109/644 (16%)
Query: 2 ARSRSRSPRWKHRSLSPV-PRNAEHYKQRHSHGHYGCEYRKDPKRPVAWRMDSEKHGQSK 60
+ SRS S R K RS S R+ H +++ R S ++
Sbjct: 4 SNSRSHSSRSKSRSQSSSRSRSRSHSRKK--------------------RYSSRSRSRTY 43
Query: 61 PRIPSRGNIYYQSYEHRSPSPNIRNS--LENVYMYKPH-RGYSPGRGDSNRRAQYMPKYS 117
R SR +Y + Y + RN+ + Y Y+ RGY G G R Y P ++
Sbjct: 44 SRSRSRDRMYSRDYRR-----DYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWN 98
Query: 118 EG---IPYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEGKWHEDEL 174
P + R+ P++ R R S + + P+ S + S
Sbjct: 99 RRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSS---------- 148
Query: 175 RHQRIQEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESREPAR 234
K S RRGS++ +T+ + + P++ K + + PKD ++
Sbjct: 149 -----PYSKSPVSKRRGSQEKQTKKA--EGEPQEESPLK-SKSQEEPKDTFEHD------ 194
Query: 235 NPKWKPEHSLPPYQEDT----DQWNLGPQTYRHAERE-HPETSSATKVSYDYRHKRPKLL 289
P S+ + + + D W G Y ++ R H + AT S +L
Sbjct: 195 -----PSESIDEFNKSSATSGDIWP-GLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPML 248
Query: 290 DGDQDFSDGRTQKYCKEEDRKYSFQKGPLNRELDCFNTGRGR--ETQDGQVKE-PFKPSK 346
+ +Q +S Q P G R +Q+ + P + S
Sbjct: 249 STVHSAKNTPSQ-------HSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSP 301
Query: 347 KDSIACTYSNKNDVDLRSS--NDKWKEKIKKEGDCRKESNSSSNQLDKSQKLPDVKPSPI 404
+IA + +++ RSS D ++ K G K N LD +K + SP+
Sbjct: 302 AKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKN-LDAREKSTFREESPL 360
Query: 405 NLR---KKSLTVKVDVKKT---VDTFRVASSYSTERQMSHDLVAVGRKSENFHPVFEHLD 458
++ S +V +K +D +S + +R ++ LV +K + F +F+H+
Sbjct: 361 RIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIK 420
Query: 459 STQNTENKPTGE-FAQEIITIIHQVKANYFPSPGITLHERFSTMQDIHKADVNEIPLNSD 517
Q +K T E F Q I++++H VK YF S +TL+ERF++ Q KA
Sbjct: 421 LPQ--ASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQ---KATEEHSTRQKS 475
Query: 518 PEIHRRIDMSLAELQ------SKQAVIYESEQTLIKII--DPNDLRHDIERRRKERLQNE 569
PEIHRRID+S + L+ ++ V E Q K + D DLRHDI+RRRKER +
Sbjct: 476 PEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKER 535
Query: 570 DEHIFHIASAAERDDQNSSFSKNYTTQRKDIITHKPFEVEGNHR 613
+ + + SS S+ KD +K ++ + H+
Sbjct: 536 GD---------SKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHK 570
>gi|239756568 PREDICTED: similar to BCL2-associated transcription
factor 1 [Homo sapiens]
Length = 869
Score = 101 bits (251), Expect = 3e-21
Identities = 112/467 (23%), Positives = 196/467 (41%), Gaps = 55/467 (11%)
Query: 191 GSEDFETRSSFQKRYPEDRD---FRKYGHTSKRPKDVERYESREPAR-NPKWKPEHSLPP 246
G ++ F KR+ ++ G+T R K+ + + E R +W+ + +L
Sbjct: 324 GDQETAKTGKFLKRFTDEESRVFLLDRGNT--RDKEASKEKGSEKGRAEGEWEDQEALDY 381
Query: 247 YQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLL-DGDQDFSDGRTQKYCK 305
+ + G Q + +E + E + DYR R +L D + F+ + + +
Sbjct: 382 FSDKES----GKQKFNDSEGDDTEETE------DYRQFRKSVLADQGKSFATA-SHRNTE 430
Query: 306 EEDRKYSFQ---KGPLNRELDCFNTGRG---RET-----QDGQVKEPFKPSKKDSIACTY 354
EE KY + KG NRE D F + +ET + K+ K K+S T
Sbjct: 431 EEGLKYKSKVSLKG--NRESDGFREEKNDKHKETGYVVERPSTTKDKHKEEDKNSERITV 488
Query: 355 SNKNDVDLRSSNDKWKEKIKKEGDCRKESNSSSNQLDKSQKLPDVKPSPINLRKKSLTVK 414
+ + ++K K+ K ++ + + +K + + + +K
Sbjct: 489 KKETQSPEQVKSEKLKDLFDYSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLK 548
Query: 415 VDVKKTVDTFRVASSYSTERQMSHDLVAVGRKSENFHPVFEHLDSTQNTENKPTGE-FAQ 473
+ D+ R AS + +R ++ LV +K + F +F+H+ Q +K T E F Q
Sbjct: 549 MAPVPLDDSNRPAS-LTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQ--ASKSTSESFIQ 605
Query: 474 EIITIIHQVKANYFPSPGITLHERFSTMQDIHKADVNEIPLNSDPEIHRRIDMSLAELQ- 532
I++++H VK YF S +TL ERF++ Q KA PEIHRRID+S + L+
Sbjct: 606 HIVSLVHHVKEQYFKSAAMTLSERFTSYQ---KATEEHSTRQKSPEIHRRIDISPSTLRK 662
Query: 533 -----SKQAVIYESEQTLIKII--DPNDLRHDIERRRKERLQNEDEHIFHIASAAERDDQ 585
++ V E Q K + D DLRHDI+ RRKER + + + +
Sbjct: 663 DTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDHRRKERSKERGD---------SKGSR 713
Query: 586 NSSFSKNYTTQRKDIITHKPFEVEGNHRNTRVRPFKSNFRGGRCQPN 632
S S+ KD +K ++ + H+ + S+ P+
Sbjct: 714 ESRGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSLSSSSSASPSSPS 760
>gi|169218320 PREDICTED: similar to BCL2-associated transcription
factor 1 isoform 2 [Homo sapiens]
Length = 869
Score = 101 bits (251), Expect = 3e-21
Identities = 112/467 (23%), Positives = 196/467 (41%), Gaps = 55/467 (11%)
Query: 191 GSEDFETRSSFQKRYPEDRD---FRKYGHTSKRPKDVERYESREPAR-NPKWKPEHSLPP 246
G ++ F KR+ ++ G+T R K+ + + E R +W+ + +L
Sbjct: 324 GDQETAKTGKFLKRFTDEESRVFLLDRGNT--RDKEASKEKGSEKGRAEGEWEDQEALDY 381
Query: 247 YQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLL-DGDQDFSDGRTQKYCK 305
+ + G Q + +E + E + DYR R +L D + F+ + + +
Sbjct: 382 FSDKES----GKQKFNDSEGDDTEETE------DYRQFRKSVLADQGKSFATA-SHRNTE 430
Query: 306 EEDRKYSFQ---KGPLNRELDCFNTGRG---RET-----QDGQVKEPFKPSKKDSIACTY 354
EE KY + KG NRE D F + +ET + K+ K K+S T
Sbjct: 431 EEGLKYKSKVSLKG--NRESDGFREEKNDKHKETGYVVERPSTTKDKHKEEDKNSERITV 488
Query: 355 SNKNDVDLRSSNDKWKEKIKKEGDCRKESNSSSNQLDKSQKLPDVKPSPINLRKKSLTVK 414
+ + ++K K+ K ++ + + +K + + + +K
Sbjct: 489 KKETQSPEQVKSEKLKDLFDYSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLK 548
Query: 415 VDVKKTVDTFRVASSYSTERQMSHDLVAVGRKSENFHPVFEHLDSTQNTENKPTGE-FAQ 473
+ D+ R AS + +R ++ LV +K + F +F+H+ Q +K T E F Q
Sbjct: 549 MAPVPLDDSNRPAS-LTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQ--ASKSTSESFIQ 605
Query: 474 EIITIIHQVKANYFPSPGITLHERFSTMQDIHKADVNEIPLNSDPEIHRRIDMSLAELQ- 532
I++++H VK YF S +TL ERF++ Q KA PEIHRRID+S + L+
Sbjct: 606 HIVSLVHHVKEQYFKSAAMTLSERFTSYQ---KATEEHSTRQKSPEIHRRIDISPSTLRK 662
Query: 533 -----SKQAVIYESEQTLIKII--DPNDLRHDIERRRKERLQNEDEHIFHIASAAERDDQ 585
++ V E Q K + D DLRHDI+ RRKER + + + +
Sbjct: 663 DTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDHRRKERSKERGD---------SKGSR 713
Query: 586 NSSFSKNYTTQRKDIITHKPFEVEGNHRNTRVRPFKSNFRGGRCQPN 632
S S+ KD +K ++ + H+ + S+ P+
Sbjct: 714 ESRGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSLSSSSSASPSSPS 760
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 60.8 bits (146), Expect = 4e-09
Identities = 120/605 (19%), Positives = 230/605 (38%), Gaps = 123/605 (20%)
Query: 52 DSEKHGQSKPRIPSRGNIYYQSYEHRSPSPNIRNSLENVYMYKPHRGYSPGRGDSN---- 107
D EK+ Q+K + + + S S+ + Y++KP+ YS DS+
Sbjct: 442 DEEKNKQNKTKTQTSDS-----------SEGKTKSVRHAYVHKPYL-YSKYYSDSDDELT 489
Query: 108 ---RRAQYMPKYSEGIPYKEHERNSYPQK-VQGGHSPDDHRVRGSGKGGKPPQRSIADSF 163
RR + E + ++ R +K Q + +G G+ + S S
Sbjct: 490 VEQRRQSIAKEKEERLLRRQINREKLEEKRKQKAEKTKSSKTKGQGRSSVDLEESSTKSL 549
Query: 164 RFEGKWHEDELRHQRIQEEKYSQSTRR--GSEDFETRSSFQKRYPED--RDFRKYGHTSK 219
+ ++ L+ +++ E+K + S +R S + E S +++Y ED + H K
Sbjct: 550 EPKAARIKEVLKERKVLEKKVALSKKRKKDSRNVEENSKKKQQYEEDSKETLKTSEHCEK 609
Query: 220 R----PKDVERYESREPARNPKWKPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSAT 275
K+++ ++ P + SL E+ ++ L EREH +S
Sbjct: 610 EKISSSKELKHVHAKSEPSKPARRLSESLHVVDENKNESKL--------EREHKRRTST- 660
Query: 276 KVSYDYRHKRPKLLDGDQDFSDGRTQK-------YCKEEDRKYSFQKGPLNRELDCFNTG 328
P +++G Q+ +D R K C EE +K QK L E
Sbjct: 661 ----------PVIMEGVQEETDTRDVKRQVERSEICTEEPQK---QKSTLKNEKHL---- 703
Query: 329 RGRETQDGQVKEPFKPSKKDSIACTYSNKNDVDLRSSNDKWKEKIKKEGDCRKESNSSSN 388
+ +++ +K K K S K + + S DK K K +GDC ++ +
Sbjct: 704 KKDDSETPHLKSLLKKEVKSS-----KEKPEREKTPSEDKLSVKHKYKGDCMHKTGDETE 758
Query: 389 QLDKSQKLPDVKPSPINLRKKSLTVKVDVKKTVDTFRVASSYSTERQMSH----DLVAVG 444
++ +K L V+ +++K +++S TER+ H L +G
Sbjct: 759 ---------------LHSSEKGLKVEENIQKQSQQTKLSSDDKTERKSKHRNERKLSVLG 803
Query: 445 RKSENFHPVFEHL----DSTQNTENKPTGEFAQEIITIIHQVKANY----------FPSP 490
+ + PV E++ ++ + NK + E H+ + +
Sbjct: 804 KDGK---PVSEYIIKTDENVRKENNKKERRLSAEKTKAEHKSRRSSDSKIQKDSLGSKQH 860
Query: 491 GITLHERF-STMQDIHKADVNEIPLNSDPE--IHRRIDMSLAELQSKQAVIYES--EQTL 545
GITL R S +D D + N PE +H+ + + L+ K + +S +
Sbjct: 861 GITLQRRSESYSEDKCDMDSTNMDSNLKPEEVVHKEKRRTKSLLEEKLVLKSKSKTQGKQ 920
Query: 546 IKIIDPNDLRHDIERRRKERLQNEDEHIFHIASAAERDDQNSSFSKNYTTQRKDIITHKP 605
+K+++ +L+ ++ A+ + D + ++ + QRK + KP
Sbjct: 921 VKVVE-TELQEGATKQ---------------ATTPKPDKEKNTEENDSEKQRKSKVEDKP 964
Query: 606 FEVEG 610
FE G
Sbjct: 965 FEETG 969
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 49.7 bits (117), Expect = 9e-06
Identities = 83/380 (21%), Positives = 141/380 (37%), Gaps = 59/380 (15%)
Query: 13 HRSLSPVPRNAEHYKQRHSHGHYGCEYRKDPKRPVAWRMDSEKHGQSKPRIPSRGNIYYQ 72
HR++S P N ++ K++ H +D +R +SEK + K ++ R +
Sbjct: 409 HRNVSESP-NRKNEKEKKVKDHKSNSKERDIRR------NSEKDDKYKNKVKKRAKSKSR 461
Query: 73 SYEHRSPSPNIRNSLENVYMYKPHRGYSPGRGDSNRRAQYMPKYSEGIPYKEHERNSYPQ 132
S R+S N K R S GR N + + S+G + +
Sbjct: 462 SKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSK 521
Query: 133 KVQGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEGKWHEDELRHQRIQEEKYSQSTR-RG 191
+++ + DH + K + RS R I + K+S ++R R
Sbjct: 522 QLESKSNEHDHS-KSKEKDRRAQSRS----------------RECDITKGKHSYNSRTRE 564
Query: 192 SEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESREPARNPKWKP-EHSLPPYQED 250
RS + DRD R K+ RY +E R + + E PP +
Sbjct: 565 RSRSRDRSRRVRSRTHDRD-------RSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSR 617
Query: 251 TDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLLDGDQDFSDGRTQKYCKEEDRK 310
+ + R +ERE ++ + K YR +Q+ ++ + E R
Sbjct: 618 SKDRRRRRRDSRSSEREESQSRNKDK----YR---------NQESKSSHRKENSESEKRM 664
Query: 311 YSFQKGPLNRELDCFNTGRGRETQDGQVKEPFKPSKKDS-----IACTYSNKNDVDLRSS 365
YS + D ++ RE + + + PF K+ S + NK D +RSS
Sbjct: 665 YS-------KSRDHNSSNNSREKKADRDQSPFSKIKQSSQDNELKSSMLKNKEDEKIRSS 717
Query: 366 NDKWKEKIK-KEGDCRKESN 384
+K +K K +E D E N
Sbjct: 718 VEKENQKSKGQENDHVHEKN 737
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 47.8 bits (112), Expect = 3e-05
Identities = 76/346 (21%), Positives = 132/346 (38%), Gaps = 39/346 (11%)
Query: 52 DSEKHGQSKPRIPSRGNIYYQ--SYEHRSPSPNIRNSLENVYMYKPHRGYSPGRGDSNRR 109
+ ++ + KPR S ++ S H S S +S++ + P R +P S +R
Sbjct: 305 ERQREKRDKPRSTSPAGQHHSPISSRHHSSSSQSGSSIQR-HSPSPRRKRTPS--PSYQR 361
Query: 110 AQYMPKYSEGIPYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEGKW 169
P PY H +S PQ+ Q SP HR KG +R+ R
Sbjct: 362 TLTPPLRRSASPYPSHSLSS-PQRKQ---SPPRHRSPMREKGRHDHERTSQSHDR----- 412
Query: 170 HEDELRHQRIQEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYES 229
RH+R ++ RG D E S ++ Y +D+ + + P+D
Sbjct: 413 -----RHERREDT-------RGKRDREKDSREEREYEQDQSSSRDHRDDREPRD---GRD 457
Query: 230 REPARNPKWKPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLL 289
R AR+ + + E L ++ D + + E P S +T+ ++DYR + +
Sbjct: 458 RRDARDTRDRRE--LRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHDYRDREGRDT 515
Query: 290 DGDQDFSDGRTQKY----CKEEDRKYSFQKGPLNR---ELDCFNTGRGRETQDGQVKEPF 342
+D ++ Y +EE + + N E+ GR R ++
Sbjct: 516 HRKEDTYPEESRSYGRNHLREESSRTEIRNESRNESRSEIRNDRMGRSRGRVPELPEKGS 575
Query: 343 KPSKKDSIACTYSNKNDVDLRSSNDKWKEKIK-KEGDCRKESNSSS 387
+ S+ I SN N D + + E+ + E D R ++ SS
Sbjct: 576 RGSRGSQIDSHSSNSNYHDSWETRSSYPERDRYPERDNRDQARDSS 621
Score = 37.7 bits (86), Expect = 0.035
Identities = 71/300 (23%), Positives = 113/300 (37%), Gaps = 79/300 (26%)
Query: 171 EDELRHQRIQEEKYSQSTRRGSEDFET----RSSFQKRYPEDRDFRKYGHTSKRPKDVER 226
E E +R +E + +R ED + R ++ EDR+ R GH ++ K R
Sbjct: 769 ERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRNPRD-GHDERKSKKRYR 827
Query: 227 YE-SREPARNPKWKPEHSLPPYQEDTDQWNLG---------------PQTYRHAEREH-- 268
E S P ++PK + EHS D+D +N G PQ R H
Sbjct: 828 NEGSPSPRQSPKRRREHS-----PDSDAYNSGDDKNEKHRLLSQVVRPQESRSLSPSHLT 882
Query: 269 -------------PETSSATK-----------VSYDYRHKRPKLLD----------GDQD 294
PE +++ S D + ++ ++L+ G
Sbjct: 883 EDRQGRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESSRMRAQDIIGHHQ 942
Query: 295 FSDGRTQKYCKEEDRKYS-FQKGPLNREL-DCFNTGRGR---ETQDGQVKEPFKPSKKDS 349
D T +E++K + QK P+ ++ D RG ++DGQV P K KK S
Sbjct: 943 SEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVGIERGNIETTSEDGQVFSPKKGQKKKS 1002
Query: 350 I-ACTYSNKNDVDLRSSNDKWKEKIKKEG----------DCRKESNSSSNQLDKSQKLPD 398
I +K D D+ S + ++ KK G + + N + L+ SQK D
Sbjct: 1003 IEKKRKKSKGDSDI-SDEEAAQQSKKKRGPRTPPITTKEELVEMCNGKNGILEDSQKKED 1061
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 43.9 bits (102), Expect = 5e-04
Identities = 108/464 (23%), Positives = 170/464 (36%), Gaps = 101/464 (21%)
Query: 3 RSRSRSP---RWKHRSLSPVP-----RNAEHYKQRHSHGHYGCEYRKDPK---------R 45
RSRSRSP R+ RS SP N + Q + Y YR+ P R
Sbjct: 721 RSRSRSPPYRRYHSRSRSPQAFRGQSPNKRNVPQGETEREYFNRYREVPPPYDMKAYYGR 780
Query: 46 PVAWR--MDSEKHGQSKPRIPSRGNIYYQSYEHRS---PSPNIRNSLENVYMYKPHRGYS 100
V +R + E++ + + + YY+ Y + PS N N ++ R
Sbjct: 781 SVDFRDPFEKERYREWERKYREWYEKYYKGYAAGAQPRPSANRENFSPERFLPLNIRNSP 840
Query: 101 PGRGDSNRRAQYMPKYSEGIPYKEHERNSYPQKVQG--GHSPDDH---------RVRGSG 149
RG RR Y+ S + ++YP+K+ GH+ D+ G G
Sbjct: 841 FTRG---RREDYVGGQSHR---SRNIGSNYPEKLSARDGHNQKDNTKSKEKESENAPGDG 894
Query: 150 KGGKPPQRSIADSFRFEGKWHEDELRHQRIQEEKYSQSTRRGSEDFETRSSFQ------- 202
KG K + R +G+ E L + ++ + S+ G E+ +T S F
Sbjct: 895 KGNKHKKHRK----RRKGEESEGFLNPELLETSRKSREPT-GVEENKTDSLFVLPSRDDA 949
Query: 203 ---KRYPEDRDFRKYGHTSKRPKDVERYESREPARNPKWKPEHSLPPYQEDTDQWNLGPQ 259
+ P D + + S++ K ER + + K K + S +E+ + GPQ
Sbjct: 950 TPVRDEPMDAESITFKSVSEKDKR-ERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQ 1008
Query: 260 TYRHAEREHPETSSATKVSYDYRHKRPKLLDGDQDFSDGRTQKYCKEEDRKYSFQKGPLN 319
ERE S P + K KEE K K +
Sbjct: 1009 EKVDGERERSPRSE------------PPI-------------KKAKEETPKTDNTKSSSS 1043
Query: 320 RELDCFNTGRGRETQDGQVKE--PFKPSKKDSIACTYS------------------NKND 359
+ D TG R+ KE KP K++ + YS N+ +
Sbjct: 1044 SQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKSEKLTTKEEKAKKPNEKN 1103
Query: 360 VDLRSSNDKWKEKIKKEGDCRKESNSSSNQLDKSQKLPDVKPSP 403
L + +K K K +++G K+ SSS ++ K + VKPSP
Sbjct: 1104 KPLDNKGEKRKRKTEEKG-VDKDFESSSMKISKLEVTEIVKPSP 1146
Score = 38.5 bits (88), Expect = 0.021
Identities = 107/496 (21%), Positives = 176/496 (35%), Gaps = 84/496 (16%)
Query: 18 PVPRNAEHYKQRHSHGHYGCEYRKDPKRPVAWRMDSEKHGQSKPRIPSRG--NIYYQSYE 75
P+ R + +QR Y ++ + G ++ R SR + +SY
Sbjct: 635 PLSREEFYREQRRLKEESKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFSRSHSRSYS 694
Query: 76 HRSPSPNIRNSLENVYMYKPHRGYSPGRGDSNRRAQYMPKYSEGIPYKE-HERNSYPQKV 134
P P + RG S +R Y S PY+ H R+ PQ
Sbjct: 695 RSPPYP------------RRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAF 742
Query: 135 QGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEGKWHEDELRHQRIQEEKYSQSTRRG-SE 193
+ G SP+ V PQ G+ + R Y G S
Sbjct: 743 R-GQSPNKRNV---------PQ----------GETEREYFNRYREVPPPYDMKAYYGRSV 782
Query: 194 DFETRSSFQK-RYPE-DRDFRKYGHTSKRPKDVERYESREPARNPKWKPEHSLP------ 245
DF R F+K RY E +R +R++ + + R A + PE LP
Sbjct: 783 DF--RDPFEKERYREWERKYREW-YEKYYKGYAAGAQPRPSANRENFSPERFLPLNIRNS 839
Query: 246 PYQEDTDQWNLGPQTY--RHAEREHPETSSATKVSYDYRHKRPKLLDGDQDFSDGRTQKY 303
P+ + +G Q++ R+ +PE SA + + K + + DG+ K+
Sbjct: 840 PFTRGRREDYVGGQSHRSRNIGSNYPEKLSARDGHNQKDNTKSKEKESENAPGDGKGNKH 899
Query: 304 CK-EEDRKYSFQKGPLNRELDCFNTGRGRETQDGQVKE----------------PFKPSK 346
K + RK +G LN EL T R G V+E P +
Sbjct: 900 KKHRKRRKGEESEGFLNPEL--LETSRKSREPTG-VEENKTDSLFVLPSRDDATPVRDEP 956
Query: 347 KDSIACTYSNKNDVDLRSSNDKWKEKIKKEGDCRKESN-----SSSNQLDKSQKLPDVKP 401
D+ + T+ + ++ D R ++K K +GD K N S + K K P K
Sbjct: 957 MDAESITFKSVSEKDKRE-----RDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQEKV 1011
Query: 402 SPINLR--KKSLTVKVDVKKTVDTFRVASSYSTERQMSHDLVAVGRKSENFHPVFEHLDS 459
R + +K ++T T SS S+ Q + RK+ + EH ++
Sbjct: 1012 DGERERSPRSEPPIKKAKEETPKTDNTKSSSSS--QKDEKITGTPRKAHS-KSAKEHQET 1068
Query: 460 TQNTENKPTGEFAQEI 475
E K ++++++
Sbjct: 1069 KPVKEEKVKKDYSKDV 1084
Score = 32.7 bits (73), Expect = 1.1
Identities = 67/328 (20%), Positives = 117/328 (35%), Gaps = 60/328 (18%)
Query: 103 RGDSNRRAQYMPKYSEGIPYKEHERNSYPQKVQGGH------SPDDHRVRGSGKGGKP-- 154
R SN+ + P + Y E +S ++ + SP ++ SG+ KP
Sbjct: 1426 RASSNK--DFTPNRDKKTDYDTREYSSSKRRDEKNELTRRKDSPSRNKDSASGQKNKPRE 1483
Query: 155 ----PQRSIADSFRFEGKWHEDELRHQRIQEEKYSQSTRRGSEDFETRSSFQKRYPEDRD 210
P++ DS + D H + K + T+R +E ET+S
Sbjct: 1484 ERDLPKKGTGDSKKSNSSPSRDRKPH----DHKATYDTKRPNE--ETKS----------- 1526
Query: 211 FRKYGHTSKRP-KDVERY--ESREPARNPKWKPEHSLPPYQEDTDQWNLGPQTYRHAERE 267
K P KD E++ E+R + K + L P + ++ + Q + +
Sbjct: 1527 ------VDKNPCKDREKHVLEARNNKESSGNKLLYILNPPETQVEKEQITGQIDKSTVKP 1580
Query: 268 HPETSSATKVSYDY-RHKRPKLLDGDQDFSDGRTQKYCKEEDRKYSFQKGPLNRELD--- 323
P+ S ++++S D R + D + SD + KEE+ + K ++ ++
Sbjct: 1581 KPQLSHSSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEESSGNISKDLKDKIVEKAK 1640
Query: 324 -------CFNTGRGRETQDGQVKEPFKPSKKDSIACTYSNKNDVDLRSSNDKWKEKIKKE 376
G R S S + T S+ + S D K+K KKE
Sbjct: 1641 ESLDTAAVVQVGISRNQSHSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKE 1700
Query: 377 GDCRKESNSSSN---------QLDKSQK 395
K+ +L+KSQK
Sbjct: 1701 KKKHKKHKKHKKHKKHAGTEVELEKSQK 1728
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 43.9 bits (102), Expect = 5e-04
Identities = 108/464 (23%), Positives = 170/464 (36%), Gaps = 101/464 (21%)
Query: 3 RSRSRSP---RWKHRSLSPVP-----RNAEHYKQRHSHGHYGCEYRKDPK---------R 45
RSRSRSP R+ RS SP N + Q + Y YR+ P R
Sbjct: 755 RSRSRSPPYRRYHSRSRSPQAFRGQSPNKRNVPQGETEREYFNRYREVPPPYDMKAYYGR 814
Query: 46 PVAWR--MDSEKHGQSKPRIPSRGNIYYQSYEHRS---PSPNIRNSLENVYMYKPHRGYS 100
V +R + E++ + + + YY+ Y + PS N N ++ R
Sbjct: 815 SVDFRDPFEKERYREWERKYREWYEKYYKGYAAGAQPRPSANRENFSPERFLPLNIRNSP 874
Query: 101 PGRGDSNRRAQYMPKYSEGIPYKEHERNSYPQKVQG--GHSPDDH---------RVRGSG 149
RG RR Y+ S + ++YP+K+ GH+ D+ G G
Sbjct: 875 FTRG---RREDYVGGQSHR---SRNIGSNYPEKLSARDGHNQKDNTKSKEKESENAPGDG 928
Query: 150 KGGKPPQRSIADSFRFEGKWHEDELRHQRIQEEKYSQSTRRGSEDFETRSSFQ------- 202
KG K + R +G+ E L + ++ + S+ G E+ +T S F
Sbjct: 929 KGNKHKKHRK----RRKGEESEGFLNPELLETSRKSREPT-GVEENKTDSLFVLPSRDDA 983
Query: 203 ---KRYPEDRDFRKYGHTSKRPKDVERYESREPARNPKWKPEHSLPPYQEDTDQWNLGPQ 259
+ P D + + S++ K ER + + K K + S +E+ + GPQ
Sbjct: 984 TPVRDEPMDAESITFKSVSEKDKR-ERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQ 1042
Query: 260 TYRHAEREHPETSSATKVSYDYRHKRPKLLDGDQDFSDGRTQKYCKEEDRKYSFQKGPLN 319
ERE S P + K KEE K K +
Sbjct: 1043 EKVDGERERSPRSE------------PPI-------------KKAKEETPKTDNTKSSSS 1077
Query: 320 RELDCFNTGRGRETQDGQVKE--PFKPSKKDSIACTYS------------------NKND 359
+ D TG R+ KE KP K++ + YS N+ +
Sbjct: 1078 SQKDEKITGTPRKAHSKSAKEHQETKPVKEEKVKKDYSKDVKSEKLTTKEEKAKKPNEKN 1137
Query: 360 VDLRSSNDKWKEKIKKEGDCRKESNSSSNQLDKSQKLPDVKPSP 403
L + +K K K +++G K+ SSS ++ K + VKPSP
Sbjct: 1138 KPLDNKGEKRKRKTEEKG-VDKDFESSSMKISKLEVTEIVKPSP 1180
Score = 37.0 bits (84), Expect = 0.060
Identities = 101/444 (22%), Positives = 160/444 (36%), Gaps = 75/444 (16%)
Query: 73 SYEHRSPSPNIRNSLENVYMYKPH-----RGYSPGRGDSNRRAQYMPKYSEGIPYKE-HE 126
S RS S + S Y P RG S +R Y S PY+ H
Sbjct: 709 STRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHS 768
Query: 127 RNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEGKWHEDELRHQRIQEEKYSQ 186
R+ PQ + G SP+ V PQ G+ + R Y
Sbjct: 769 RSRSPQAFR-GQSPNKRNV---------PQ----------GETEREYFNRYREVPPPYDM 808
Query: 187 STRRG-SEDFETRSSFQK-RYPE-DRDFRKYGHTSKRPKDVERYESREPARNPKWKPEHS 243
G S DF R F+K RY E +R +R++ + + R A + PE
Sbjct: 809 KAYYGRSVDF--RDPFEKERYREWERKYREW-YEKYYKGYAAGAQPRPSANRENFSPERF 865
Query: 244 LP------PYQEDTDQWNLGPQTY--RHAEREHPETSSATKVSYDYRHKRPKLLDGDQDF 295
LP P+ + +G Q++ R+ +PE SA + + K + +
Sbjct: 866 LPLNIRNSPFTRGRREDYVGGQSHRSRNIGSNYPEKLSARDGHNQKDNTKSKEKESENAP 925
Query: 296 SDGRTQKYCK-EEDRKYSFQKGPLNRELDCFNTGRGRETQDGQVKE-------------- 340
DG+ K+ K + RK +G LN EL T R G V+E
Sbjct: 926 GDGKGNKHKKHRKRRKGEESEGFLNPEL--LETSRKSREPTG-VEENKTDSLFVLPSRDD 982
Query: 341 --PFKPSKKDSIACTYSNKNDVDLRSSNDKWKEKIKKEGDCRKESN-----SSSNQLDKS 393
P + D+ + T+ + ++ D R ++K K +GD K N S + K
Sbjct: 983 ATPVRDEPMDAESITFKSVSEKDKRE-----RDKPKAKGDKTKRKNDGSAVSKKENIVKP 1037
Query: 394 QKLPDVKPSPINLR--KKSLTVKVDVKKTVDTFRVASSYSTERQMSHDLVAVGRKSENFH 451
K P K R + +K ++T T SS S+ Q + RK+ +
Sbjct: 1038 AKGPQEKVDGERERSPRSEPPIKKAKEETPKTDNTKSSSSS--QKDEKITGTPRKAHS-K 1094
Query: 452 PVFEHLDSTQNTENKPTGEFAQEI 475
EH ++ E K ++++++
Sbjct: 1095 SAKEHQETKPVKEEKVKKDYSKDV 1118
Score = 32.7 bits (73), Expect = 1.1
Identities = 67/328 (20%), Positives = 117/328 (35%), Gaps = 60/328 (18%)
Query: 103 RGDSNRRAQYMPKYSEGIPYKEHERNSYPQKVQGGH------SPDDHRVRGSGKGGKP-- 154
R SN+ + P + Y E +S ++ + SP ++ SG+ KP
Sbjct: 1460 RASSNK--DFTPNRDKKTDYDTREYSSSKRRDEKNELTRRKDSPSRNKDSASGQKNKPRE 1517
Query: 155 ----PQRSIADSFRFEGKWHEDELRHQRIQEEKYSQSTRRGSEDFETRSSFQKRYPEDRD 210
P++ DS + D H + K + T+R +E ET+S
Sbjct: 1518 ERDLPKKGTGDSKKSNSSPSRDRKPH----DHKATYDTKRPNE--ETKS----------- 1560
Query: 211 FRKYGHTSKRP-KDVERY--ESREPARNPKWKPEHSLPPYQEDTDQWNLGPQTYRHAERE 267
K P KD E++ E+R + K + L P + ++ + Q + +
Sbjct: 1561 ------VDKNPCKDREKHVLEARNNKESSGNKLLYILNPPETQVEKEQITGQIDKSTVKP 1614
Query: 268 HPETSSATKVSYDY-RHKRPKLLDGDQDFSDGRTQKYCKEEDRKYSFQKGPLNRELD--- 323
P+ S ++++S D R + D + SD + KEE+ + K ++ ++
Sbjct: 1615 KPQLSHSSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEESSGNISKDLKDKIVEKAK 1674
Query: 324 -------CFNTGRGRETQDGQVKEPFKPSKKDSIACTYSNKNDVDLRSSNDKWKEKIKKE 376
G R S S + T S+ + S D K+K KKE
Sbjct: 1675 ESLDTAAVVQVGISRNQSHSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKE 1734
Query: 377 GDCRKESNSSSN---------QLDKSQK 395
K+ +L+KSQK
Sbjct: 1735 KKKHKKHKKHKKHKKHAGTEVELEKSQK 1762
>gi|244790020 synaptotagmin-like 2 isoform i [Homo sapiens]
Length = 935
Score = 43.5 bits (101), Expect = 6e-04
Identities = 65/313 (20%), Positives = 122/313 (38%), Gaps = 48/313 (15%)
Query: 326 NTGRGRETQDGQVKEPFKPSKKDSIACTYSNKNDVDLRSSNDKWKEKIKKEGDCRKE--- 382
NT + + + Q K PF SK + KN+ ++ + E KE
Sbjct: 147 NTRKPNVSPEKQRKNPFNSSKLPEGHSSQQTKNEQSKNGRTGLFQTSKEDELSESKEKST 206
Query: 383 -SNSSSNQLDKS-QKLPDVK-----PSPINLRKKSLTVKVDVKKTVDTFRVASSYSTERQ 435
+++S +L+KS Q LP + +PI +K + D+ K + S RQ
Sbjct: 207 VADTSIQKLEKSKQTLPGLSNGSQIKAPIPKARKMIYKSTDLNKD-------DNQSFPRQ 259
Query: 436 MSHDLVAVGRKSENFHPVFEHLDSTQNTENKPTGEFAQEIITIIHQVKA-NYFPSPGITL 494
+ L A G + + S+ +T++ E + H + + SPG+T+
Sbjct: 260 RTDSLKARGAP----RGILKRNSSSSSTDS--------ETLRYNHNFEPKSKIVSPGLTI 307
Query: 495 HERFSTMQDIHKADVNEIPLNSDPEIHRRIDMSLAELQSKQAVIYESEQTLIKIIDPNDL 554
HER S + H + N P + +P H R EL +I+ E +++ + L
Sbjct: 308 HERISEKE--HSLEDNSSPNSLEPLKHVRFSAVKDELPQSPGLIHGREVGEFSVLESDRL 365
Query: 555 RHDIE---------------RRRKERLQNEDEHIFHIASAAERDDQNS-SFSKNYTTQRK 598
++ +E + RK L ++ +++ + S SF N
Sbjct: 366 KNGMEDAGDTEEFQSDPKPSQYRKPSLFHQSTSSPYVSKSETHQPMTSGSFPINGLHSHS 425
Query: 599 DIITHKPFEVEGN 611
+++T +P +E +
Sbjct: 426 EVLTARPQSMENS 438
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 43.1 bits (100), Expect = 8e-04
Identities = 58/243 (23%), Positives = 96/243 (39%), Gaps = 19/243 (7%)
Query: 2 ARSRSRSPRWKHRSLSPVPRNAEHYKQRHSHGHYGCEYRKDPKRPVAWRMDSEKHGQSKP 61
+RSRSR R K RS S +++ H K R S G R + R S+K K
Sbjct: 194 SRSRSRHSR-KSRSRSGSSKSS-HSKSR-SRSRSGSRSRSKSRSRSQSRSRSKKE---KS 247
Query: 62 RIPSRGNIYYQSYEHRSPSPNIRNSLENVYMYKPHRGYSPGRGDSNRRAQYMPKY-SEGI 120
R PS+ +S+ ++ E + G R S +++ + S+
Sbjct: 248 RSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQER 307
Query: 121 PYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEGKWHEDELRHQRIQ 180
+E +R S + S R R KGG + R K + +R +
Sbjct: 308 RVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRS------RSRSKSKDKRKGRKRSR 361
Query: 181 EEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESREPARNPKWKP 240
EE S+S R ++S ++ RD + K+ +D +R +SR P+R+ +
Sbjct: 362 EESRSRSRSR------SKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKER 415
Query: 241 EHS 243
EH+
Sbjct: 416 EHA 418
Score = 32.3 bits (72), Expect = 1.5
Identities = 44/229 (19%), Positives = 77/229 (33%), Gaps = 11/229 (4%)
Query: 175 RHQRIQEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESREPAR 234
R R+ E+K RR + S + R R R +SK R SR +R
Sbjct: 168 RKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSR 227
Query: 235 N-----------PKWKPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRH 283
+ + K E S P +E + + R ++ E +
Sbjct: 228 SRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPK 287
Query: 284 KRPKLLDGDQDFSDGRTQKYCKEEDRKYSFQKGPLNRELDCFNTGRGRETQDGQVKEPFK 343
R + S R+Q+ EE+++ S +G + + R R + + +
Sbjct: 288 SRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSR 347
Query: 344 PSKKDSIACTYSNKNDVDLRSSNDKWKEKIKKEGDCRKESNSSSNQLDK 392
KD ++ + RS + E+ +K G R SS + K
Sbjct: 348 SKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKK 396
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 41.6 bits (96), Expect = 0.002
Identities = 87/422 (20%), Positives = 149/422 (35%), Gaps = 91/422 (21%)
Query: 23 AEHYKQRHSHGHYGCEYRKDPKRPVAWRMDSEKHGQSKPRIPSRGNIYYQSYEHRSPSPN 82
AEH Q H +G E D+E + + +PS ++S+ H+ +
Sbjct: 125 AEHGGQARGHRGHGSE-------------DTEDSAEHRHHLPS-----HRSHSHQDEDED 166
Query: 83 IRNSLENVY--MYKPHRGYSPGRGDSNRRAQYMPKYSEGIPYKEHERNSYPQKVQGGHSP 140
S E+ + + HRG+ G D EG +E E + GH
Sbjct: 167 EVVSSEHHHHILRHGHRGHD-GEDD------------EGEEEEEEEEEEEEASTEYGHQA 213
Query: 141 DDHRVRGSGKGG--KPPQRSIADSFRFEGKWHED-----------------ELRHQRI-- 179
HR GS + S R +G +D E RHQ
Sbjct: 214 HRHRGHGSEEDEDVSDGHHHHGPSHRHQGHEEDDDDDDDDDDDDDDDDVSIEYRHQAHRH 273
Query: 180 ------QEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESREPA 233
++E S RS + +D +YGH + R +D + E +
Sbjct: 274 QGHGIEEDEDVSDGHHHRDPSHRHRSHEEDDNDDDDVSTEYGHQAHRHQDHRKEEVEAVS 333
Query: 234 -RNPKWKPEHSLPPYQED-------TDQWNLGPQTYRHA---EREHPETSSATKVSYDYR 282
+ P+H ++++ T++W+ GPQ H E E E + Y
Sbjct: 334 GEHHHHVPDHRHQGHRDEEEDEDVSTERWHQGPQHVHHGLVDEEEEEEEITVQFGHYVAS 393
Query: 283 HKRPKLLDGDQDFSD--------GRTQKYCKEEDRKYSFQKG---PLNREL-DCFNTGRG 330
H+ ++DF D + +EED + S + G P +R+ TG G
Sbjct: 394 HQPRGHKSDEEDFQDEYKTEVPHHHHHRVPREEDEEVSAELGHQAPSHRQSHQDEETGHG 453
Query: 331 RETQDGQVKEPFKPSKKDSIACTYSNKNDVDLRSSNDKWKEKIKKEGDCRKESNSSSNQL 390
Q G +KE ++ K+ LR + + +++ +++ +E + SS Q
Sbjct: 454 ---QRGSIKEMSHHPPGHTVV-----KDRSHLRKDDSEEEKEKEEDPGSHEEDDESSEQG 505
Query: 391 DK 392
+K
Sbjct: 506 EK 507
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 40.8 bits (94), Expect = 0.004
Identities = 65/319 (20%), Positives = 117/319 (36%), Gaps = 49/319 (15%)
Query: 3 RSRSRSPRWKHRSLSPV-----PRNAEHYKQRHSHGHYGCEYRKDPKRPVAWRMDSEKHG 57
R RSRSPR RSLSP R+ H+++ H + E ++ +R R++ E
Sbjct: 257 RRRSRSPR---RSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQ---RLEREAKE 310
Query: 58 QSKPRIPSRGNIYYQSYEHRSPSPNIRNSLENVYMYKPHRGYSPGRGDSNRRAQYMPKYS 117
+ K R SR + E R R HR S R R
Sbjct: 311 REKERRRSRS--IDRGLERRRSRSRER-----------HRSRSRSRDRKGDR-------- 349
Query: 118 EGIPYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEGKWHEDELRHQ 177
++ +R + +G D+ + K +RS S + +E +H+
Sbjct: 350 -----RDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHK 404
Query: 178 RIQEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESREPARNPK 237
++++ + +R S+ + S + R + R + + KR + + +S + K
Sbjct: 405 EDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESK 464
Query: 238 WKP-EHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLLDGDQDFS 296
K + S Q TD + +REH + ++ + R K +D S
Sbjct: 465 EKSNKRSRSGSQGRTD------SVEKSKKREHSPSKEKSR-----KRSRSKERSHKRDHS 513
Query: 297 DGRTQKYCKEEDRKYSFQK 315
D + Q + R S ++
Sbjct: 514 DSKDQSDKHDRRRSQSIEQ 532
>gi|15011902 synaptotagmin-like 2 isoform a [Homo sapiens]
Length = 910
Score = 40.0 bits (92), Expect = 0.007
Identities = 62/300 (20%), Positives = 116/300 (38%), Gaps = 48/300 (16%)
Query: 339 KEPFKPSKKDSIACTYSNKNDVDLRSSNDKWKEKIKKEGDCRKE----SNSSSNQLDKS- 393
K PF SK + KN+ ++ + E KE +++S +L+KS
Sbjct: 159 KNPFNSSKLPEGHSSQQTKNEQSKNGRTGLFQTSKEDELSESKEKSTVADTSIQKLEKSK 218
Query: 394 QKLPDVK-----PSPINLRKKSLTVKVDVKKTVDTFRVASSYSTERQMSHDLVAVGRKSE 448
Q LP + +PI +K + D+ K + S RQ + L A G
Sbjct: 219 QTLPGLSNGSQIKAPIPKARKMIYKSTDLNKD-------DNQSFPRQRTDSLKARGAP-- 269
Query: 449 NFHPVFEHLDSTQNTENKPTGEFAQEIITIIHQVKA-NYFPSPGITLHERFSTMQDIHKA 507
+ + S+ +T++ E + H + + SPG+T+HER S + H
Sbjct: 270 --RGILKRNSSSSSTDS--------ETLRYNHNFEPKSKIVSPGLTIHERISEKE--HSL 317
Query: 508 DVNEIPLNSDPEIHRRIDMSLAELQSKQAVIYESEQTLIKIIDPNDLRHDIE-------- 559
+ N P + +P H R EL +I+ E +++ + L++ +E
Sbjct: 318 EDNSSPNSLEPLKHVRFSAVKDELPQSPGLIHGREVGEFSVLESDRLKNGMEDAGDTEEF 377
Query: 560 -------RRRKERLQNEDEHIFHIASAAERDDQNS-SFSKNYTTQRKDIITHKPFEVEGN 611
+ RK L ++ +++ + S SF N +++T +P +E +
Sbjct: 378 QSDPKPSQYRKPSLFHQSTSSPYVSKSETHQPMTSGSFPINGLHSHSEVLTARPQSMENS 437
>gi|244790013 synaptotagmin-like 2 isoform g [Homo sapiens]
Length = 934
Score = 40.0 bits (92), Expect = 0.007
Identities = 62/300 (20%), Positives = 116/300 (38%), Gaps = 48/300 (16%)
Query: 339 KEPFKPSKKDSIACTYSNKNDVDLRSSNDKWKEKIKKEGDCRKE----SNSSSNQLDKS- 393
K PF SK + KN+ ++ + E KE +++S +L+KS
Sbjct: 159 KNPFNSSKLPEGHSSQQTKNEQSKNGRTGLFQTSKEDELSESKEKSTVADTSIQKLEKSK 218
Query: 394 QKLPDVK-----PSPINLRKKSLTVKVDVKKTVDTFRVASSYSTERQMSHDLVAVGRKSE 448
Q LP + +PI +K + D+ K + S RQ + L A G
Sbjct: 219 QTLPGLSNGSQIKAPIPKARKMIYKSTDLNKD-------DNQSFPRQRTDSLKARGAP-- 269
Query: 449 NFHPVFEHLDSTQNTENKPTGEFAQEIITIIHQVKA-NYFPSPGITLHERFSTMQDIHKA 507
+ + S+ +T++ E + H + + SPG+T+HER S + H
Sbjct: 270 --RGILKRNSSSSSTDS--------ETLRYNHNFEPKSKIVSPGLTIHERISEKE--HSL 317
Query: 508 DVNEIPLNSDPEIHRRIDMSLAELQSKQAVIYESEQTLIKIIDPNDLRHDIE-------- 559
+ N P + +P H R EL +I+ E +++ + L++ +E
Sbjct: 318 EDNSSPNSLEPLKHVRFSAVKDELPQSPGLIHGREVGEFSVLESDRLKNGMEDAGDTEEF 377
Query: 560 -------RRRKERLQNEDEHIFHIASAAERDDQNS-SFSKNYTTQRKDIITHKPFEVEGN 611
+ RK L ++ +++ + S SF N +++T +P +E +
Sbjct: 378 QSDPKPSQYRKPSLFHQSTSSPYVSKSETHQPMTSGSFPINGLHSHSEVLTARPQSMENS 437
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 38.9 bits (89), Expect = 0.016
Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 18/177 (10%)
Query: 106 SNRRAQYMPKYSEGIPYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRS--IADSF 163
S R + + + + H + + G S H GS + ++ D
Sbjct: 1171 SRRGGRQGSHHEQSVDRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRQTRKDKQSGDGS 1230
Query: 164 RFEGKWHE------DELRHQRIQEEKYSQS-TRRGSEDFETRSSFQKRYPEDRDFRKYGH 216
R G H D RH ++ +E+ S S T R ++ S +R+ +D + R G
Sbjct: 1231 RHSGSRHHEAASWADSSRHSQVGQEQSSGSRTSRHQGSSVSQDSDSERHSDDSE-RLSGS 1289
Query: 217 TSKRPKDVERYESREPARNPKWKPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETSS 273
S+ R +SR+ +R+P + +QED + R + H E+SS
Sbjct: 1290 ASRNHHGSSREQSRDGSRHPGF--------HQEDRASHGHSADSSRQSGTHHTESSS 1338
Score = 37.0 bits (84), Expect = 0.060
Identities = 49/241 (20%), Positives = 87/241 (36%), Gaps = 32/241 (13%)
Query: 56 HGQSKPRIPSRGNIYYQSYEHRSPSPNIRNSLENVYMYKPHRGYSPGRGDSNRRAQYMPK 115
HGQ+ P R ++ + S ++ + + RG+ PG R+ Y
Sbjct: 1455 HGQTAPSTGGRQGSRHEQARNSSRHSASQDGQDTI------RGH-PGSSRGGRQGSY--- 1504
Query: 116 YSEGIPYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPP--QRSIADSFRFEGKWHED- 172
+ + + H + G S H G + + D R G H +
Sbjct: 1505 HEQSVDRSGHSGYHHSHTTPQGRSDASHGQSGPRSASRQTRNEEQSGDGSRHSGSRHHEP 1564
Query: 173 -----ELRHQRIQEEKYS---QSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDV 224
RH ++ + + + S R+GS + R S + + ED + R+ S+
Sbjct: 1565 STRAGSSRHSQVGQGESAGSKTSRRQGSSVSQDRDS--EGHSEDSE-RRSESASRNHYGS 1621
Query: 225 ERYESREPARNPKWKPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHK 284
R +SR +RNP+ +QED ++ R + H ETSS + +
Sbjct: 1622 AREQSRHGSRNPR--------SHQEDRASHGHSAESSRQSGTRHAETSSGGQAASSQEQA 1673
Query: 285 R 285
R
Sbjct: 1674 R 1674
Score = 32.0 bits (71), Expect = 1.9
Identities = 76/341 (22%), Positives = 120/341 (35%), Gaps = 54/341 (15%)
Query: 21 RNAEHYKQRHSH-GHYGCEYRKDPKRPVAWRMDSEKHGQSKPRIPSRGNIYYQSYEHRSP 79
R H++Q GH G + + R D+ HGQS R SR Q+ + +
Sbjct: 1176 RQGSHHEQSVDRSGHSGSHHSHTTSQG---RSDAS-HGQSGSRSASR-----QTRKDKQS 1226
Query: 80 SPNIRNSLENVYMYKPHRGYSPGRGDSNRRAQYMPKYSEGIPYKEHERNSYPQKVQG-GH 138
R+S + H S DS+R +Q + S G H+ +S Q H
Sbjct: 1227 GDGSRHSGS-----RHHEAAS--WADSSRHSQVGQEQSSGSRTSRHQGSSVSQDSDSERH 1279
Query: 139 SPDDHRVRGSGK---GGKPPQRSIADSFRFEGKWHEDELRHQRIQEEKYSQSTRRGSEDF 195
S D R+ GS G ++S D R G ED H +S + R S
Sbjct: 1280 SDDSERLSGSASRNHHGSSREQS-RDGSRHPGFHQEDRASH------GHSADSSRQSGTH 1332
Query: 196 ETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESR-----EPARNPKWKPEHSLPPYQED 250
T SS + H R ER+ SR + +R+ + ++
Sbjct: 1333 HTESSSHGQAVS-------SHEQARSSPGERHGSRHQQSADSSRHSGIGHRQASSAVRDS 1385
Query: 251 TDQWNLGPQTYR---HAEREHPETSSATKVSYDYRHKRPKLLDGDQDFSDGRTQKY---- 303
+ + G Q H+E ++ SA + ++ + G S GR++ +
Sbjct: 1386 GHRGSSGSQVTNSEGHSEDSDTQSVSAHGQAGPHQQSHKESARGQSGESSGRSRSFLYQV 1445
Query: 304 -CKEEDRKYSFQKGPL------NRELDCFNTGRGRETQDGQ 337
E+ Q P +R N+ R +QDGQ
Sbjct: 1446 SSHEQSESTHGQTAPSTGGRQGSRHEQARNSSRHSASQDGQ 1486
Score = 30.8 bits (68), Expect = 4.3
Identities = 37/193 (19%), Positives = 65/193 (33%), Gaps = 18/193 (9%)
Query: 102 GRGDSNRRAQYMPKYSEGIPYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRSIAD 161
G S+RR + Y + + H + + G S GS + +
Sbjct: 3436 GHPGSSRRGRQGSHYEQSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRQTRNDEQS 3495
Query: 162 --------SFRFEGKWHEDELRH-QRIQEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFR 212
S E D RH Q Q + T R ++ S + + ED + R
Sbjct: 3496 GDGSRHSWSHHHEASTQADSSRHSQSGQGQSAGPRTSRNQGSSVSQDSDSQGHSEDSE-R 3554
Query: 213 KYGHTSKRPKDVERYESREPARNPKWKPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETS 272
G S+ + + +SR+ +R+P + ED ++ R + H E S
Sbjct: 3555 WSGSASRNHRGSAQEQSRDGSRHP--------TSHHEDRAGHGHSAESSRQSGTHHAENS 3606
Query: 273 SATKVSYDYRHKR 285
S + + + R
Sbjct: 3607 SGGQAASSHEQAR 3619
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 38.9 bits (89), Expect = 0.016
Identities = 91/470 (19%), Positives = 163/470 (34%), Gaps = 97/470 (20%)
Query: 125 HERNSYPQKVQGGHSPDDHRVRGSGKGGK------PPQRSIADSFRFEGKWHEDELRHQR 178
HER ++ Q + D+ R +G G PP + EDE+
Sbjct: 1241 HERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVP--- 1297
Query: 179 IQEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESREPARNPKW 238
+E +Q R E+F+ + D R E+R P R P+
Sbjct: 1298 -DDETVNQMIARHEEEFDL-------------------FMRMDLDRRREEARNPKRKPRL 1337
Query: 239 KPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLLDGDQDFSDG 298
E LP + D ER E RH++ + D+SD
Sbjct: 1338 MEEDELPSWIIKDD---------AEVERLTCEEEEEKMFGRGSRHRK------EVDYSDS 1382
Query: 299 RTQKYCKEE-------DRKYSFQKGPLNRELDCFNTGRGRETQDGQVKEPFKPSKKDSIA 351
T+K ++ D S +G + F T + ++G ++E + ++
Sbjct: 1383 LTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKK-- 1440
Query: 352 CTYSNKNDVDLRSSNDKWKEKIK-KEGDCRKESNSSSNQLDKSQKLPDVKPSPINLRKKS 410
+ K D D SS + + K+ + +K+ +K + P+P NL KK
Sbjct: 1441 SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEK------LSPNPPNLTKK- 1493
Query: 411 LTVKVDVKKTVDTFRVASSYSTERQMSHDLVAVG------------RKSENFHPVFEHLD 458
+KK VD S+ RQ+S + + RK +F + E +
Sbjct: 1494 ------MKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI- 1546
Query: 459 STQNTENKPTGEFAQEIITIIHQVKANYFPSPGITLHERFSTMQDIHKADVNEIPLNSDP 518
+N + + + ++++ + A F G ++E +Q + + +I D
Sbjct: 1547 --RNHKYRSLNDLEKDVMLLCQ--NAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1602
Query: 519 EIHRRIDMSLAELQSKQAVIYESEQTLIKIIDPNDLRHDIERRRKERLQN 568
E + E + ESE +K+ I+ RKE+ Q+
Sbjct: 1603 EGEESEEEEEGEEEGS-----ESESRSVKV--------KIKLGRKEKAQD 1639
>gi|34098946 nuclease sensitive element binding protein 1 [Homo
sapiens]
Length = 324
Score = 38.1 bits (87), Expect = 0.027
Identities = 38/191 (19%), Positives = 82/191 (42%), Gaps = 16/191 (8%)
Query: 63 IPSRGNIYYQSYEH-------RSPSPNIRNSLENVYMYKPHRGY-SPGRGDSNRRAQY-- 112
+P +G+ Y H R P N + + +N + + G S G + +R Y
Sbjct: 131 VPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRR 190
Query: 113 --MPKYSEGIPYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEGKWH 170
P Y PY + S P VQG + +G+G+ G+P ++++ +R ++
Sbjct: 191 RRFPPYYMRRPYGRRPQYSNPP-VQG-EVMEGADNQGAGEQGRPVRQNMYRGYR--PRFR 246
Query: 171 EDELRHQRIQEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESR 230
R ++ +E+ + ++ + + Q+RY + ++R+ + +P+D + ++
Sbjct: 247 RGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAA 306
Query: 231 EPARNPKWKPE 241
+P PE
Sbjct: 307 DPPAENSSAPE 317
>gi|4503351 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo
sapiens]
Length = 1616
Score = 37.7 bits (86), Expect = 0.035
Identities = 54/237 (22%), Positives = 86/237 (36%), Gaps = 33/237 (13%)
Query: 22 NAEHYKQRHSHGHY--GCEYRKDPKRPVAWRMDSEKHGQSKPRIPSRGNIYYQSYEHRSP 79
N H R +G G + R + +R +S SKPR P R ++ SP
Sbjct: 94 NGAHAYNREVNGRLENGNQARSEARRVGMADANSPPKPLSKPRTPRRSKSDGEAKPEPSP 153
Query: 80 SPNIRNSLENVYMYKPHRGYSPGRGDSNRRAQYMPKYSEGIPYKEHERNSYPQKVQGGHS 139
SP I H P + P +E ER + ++
Sbjct: 154 SPRITRKSTRQTTITSHFAKGPAKRK---------------PQEESERAKSDESIKEEDK 198
Query: 140 PDD---HRVRGSGKGGKP-----PQRSIADSFRFEGKWHEDELRHQRIQ---EEKYSQST 188
D RV + +P P+R+ + + R E + DE +R++ +E +
Sbjct: 199 DQDEKRRRVTSRERVARPLPAEEPERAKSGT-RTEKEEERDEKEEKRLRSQTKEPTPKQK 257
Query: 189 RRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDV---ERYESREPAR-NPKWKPE 241
+ D E R+ Q ED D + +PKD+ R E +EP + NP+ E
Sbjct: 258 LKEEPDREARAGVQADEDEDGDEKDEKKHRSQPKDLAAKRRPEEKEPEKVNPQISDE 314
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 37.7 bits (86), Expect = 0.035
Identities = 60/251 (23%), Positives = 90/251 (35%), Gaps = 31/251 (12%)
Query: 4 SRSRSPRWKHRSLSPVPRNAEHYKQRHSHGHYGCEYRKDPKRPVAW----------RMDS 53
SRSRSP+W+ R+A+ + + S G + P+RP W R S
Sbjct: 506 SRSRSPQWRR------SRSAQRWGRSRSPQRRG--RSRSPQRP-GWSRSRNTQRRGRSRS 556
Query: 54 EKHGQSKPRIP-----SRGNIYYQSYEHRSPSPNIRNSLENVYMYKPHRGYSPG-RGDSN 107
+ G+S R P SR + RS +P R S + R +P RG S
Sbjct: 557 ARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSR 616
Query: 108 RRAQYMPKYSEGIPYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEG 167
R + P + R+ P + G RG + P +R + S
Sbjct: 617 SRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPAR 676
Query: 168 KWHEDELRHQRIQEEKYSQSTRRG---SEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDV 224
+ R + S++ RRG S R R P+ R + G +S+R K+
Sbjct: 677 RSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRG--RSGSSSER-KNK 733
Query: 225 ERYESREPARN 235
R R N
Sbjct: 734 SRTSQRRSRSN 744
Score = 34.3 bits (77), Expect = 0.39
Identities = 39/169 (23%), Positives = 62/169 (36%), Gaps = 15/169 (8%)
Query: 3 RSRSRSPRWKHRSLSPVPRNAEHYKQRHSHGHYGCEYRKDPKRPVAWRMDSEKHGQSKPR 62
RSRSR+P + RS S P + + G + P+R + + G+S R
Sbjct: 657 RSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSR 716
Query: 63 IPSRGNIYYQSYEHRSPS-PNIRNSLENV--------YMYKPHRGYSPGRGDSNRRAQYM 113
P R S E ++ S + R S N + R S R + R
Sbjct: 717 TPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLR 776
Query: 114 PKYSEGIPYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRSIADS 162
S P + + + P++ + G S + K PP+RS + S
Sbjct: 777 RSLSGSSPCPKQKSQTPPRRSRSGSS------QPKAKSRTPPRRSRSSS 819
Score = 30.0 bits (66), Expect = 7.4
Identities = 69/294 (23%), Positives = 99/294 (33%), Gaps = 38/294 (12%)
Query: 3 RSRSRSPRWKHRSLSPVPRNAEHYKQRHSHGHYGCEYRKDPKRPVAWRMDSEKHGQSKPR 62
RSRSR+P + RS S P +R S R + P + G+S+ R
Sbjct: 572 RSRSRTPARRGRSRSRTP------ARRRSRSRTPTRRRSRSRTPA-------RRGRSRSR 618
Query: 63 IPSRGNIYYQS---YEHRSPSPNIRNSLENVYMYKPHRGYS-------PGRGDSNRRAQY 112
P+R +S RS SP R S + RG S GR S A+
Sbjct: 619 TPARRRSRTRSPVRRRSRSRSP-ARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARR 677
Query: 113 MPKYSEGIPYKE-HERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQR----SIADSFRFEG 167
+ P + R+ P++ G S VR + PQR + + +
Sbjct: 678 SGRSRSRTPARRGRSRSRTPRR---GRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKS 734
Query: 168 KWHEDELRHQRIQEEKYSQ-STRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVER 226
+ + R E K S+ S+RR RS + R R K+
Sbjct: 735 RTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPP 794
Query: 227 YESREPARNPKWK----PEHSLPPYQEDTDQWNLGPQTYRHAERE-HPETSSAT 275
SR + PK K P S Q + P H+ HP+ S T
Sbjct: 795 RRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGT 848
>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
Length = 564
Score = 37.0 bits (84), Expect = 0.060
Identities = 80/413 (19%), Positives = 156/413 (37%), Gaps = 56/413 (13%)
Query: 193 EDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESREPARNPKWKPEHSLPPYQEDTD 252
+DFE R +++ E+ +R D E +RE R + + L QE+
Sbjct: 2 DDFERRRELRRQKREEMRLEAERIAYQRNDDDEEEAARERRRRAR---QERLRQKQEEES 58
Query: 253 QWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLLDGDQDFS--------DGRTQKYC 304
+ Q +A+ P+ + T + ++GD + + + R QK
Sbjct: 59 LGQVTDQVEVNAQNSVPDEEAKTTTTNTQ-------VEGDDEAAFLERLARREERRQKRL 111
Query: 305 KEE-DRKYSFQKGPLNRELDCFNTGRGRETQDGQVKEPFKPSKK----------DSIACT 353
+E +R+ F + L + +T + + E + S+ +++ +
Sbjct: 112 QEALERQKEFDPTITDASLSLPSRRMQNDTAENETTEKEEKSESRQERYEIEETETVTKS 171
Query: 354 YSNKNDVDLRSSNDKWKEKIKKEGDCRKESNSSSNQLD--------KSQKLPDVKPSPIN 405
Y + D + + KEK ++E + K + NQ + K +KL + KP+
Sbjct: 172 YQKNDWRDAEENKKEDKEKEEEEEEKPKRGSIGENQGEEKGTKVQAKREKLQEDKPT--- 228
Query: 406 LRKKSLTVKVDVKKTVDTFRVASSYSTERQMSHDLVAVGRKSENFHPVFEHLDSTQNTEN 465
KK +KK + S+ ++ ++ KS+N + L T+NT +
Sbjct: 229 -FKKEEIKDEKIKKDKEPKEEVKSFMDRKKGFTEV-----KSQNGEFMTHKLKHTENTFS 282
Query: 466 KPTGEFAQEIITI--IHQVKA-----NYFPSPGITLHERFSTMQDIHKADVNEIPLNSDP 518
+P G + + QV+A G T E F ++ + E+
Sbjct: 283 RPGGRASVDTKEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKK 342
Query: 519 EIHRRIDMSLAELQSKQAVIYESEQTLIKIIDPNDLRHDIERRRKERLQNEDE 571
RR + E + KQ E+++ L + + L+ +IERRR E + +
Sbjct: 343 REERRKVLEEEEQRRKQE---EADRKLREEEEKRRLKEEIERRRAEAAEKRQK 392
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 36.6 bits (83), Expect = 0.079
Identities = 92/462 (19%), Positives = 160/462 (34%), Gaps = 113/462 (24%)
Query: 125 HERNSYPQKVQGGHSPDDHRVRGSGKGGK------PPQRSIADSFRFEGKWHEDELRHQR 178
HER ++ Q + D+ R +G G PP + EDE+
Sbjct: 1241 HERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVP--- 1297
Query: 179 IQEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESREPARNPKW 238
+E +Q R E+F+ + D R E+R P R P+
Sbjct: 1298 -DDETVNQMIARHEEEFDL-------------------FMRMDLDRRREEARNPKRKPRL 1337
Query: 239 KPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLLDGDQDFSDG 298
E LP + D ER E RH++ + D+SD
Sbjct: 1338 MEEDELPSWIIKDD---------AEVERLTCEEEEEKMFGRGSRHRK------EVDYSDS 1382
Query: 299 RTQKYCKEEDRKYSFQKGPLNRELDCFNTGRGRETQDGQVKEPFKPSKKDSIACTYSNKN 358
T+K + + ++G L E++ ++ + K+ + K+DS A + +
Sbjct: 1383 LTEKQWLK-----AIEEGTL-EEIE----------EEVRQKKSSRKRKRDSDAGSSTPTT 1426
Query: 359 DVDLRSSNDKWKEKIKKEGDCRKESNSSSNQLDKSQKLPDVKPSPINLRKKSLTVKVDVK 418
R +D+ K K KK G E + P+P NL KK +K
Sbjct: 1427 STRSRDKDDESK-KQKKRGRPPAEK---------------LSPNPPNLTKK-------MK 1463
Query: 419 KTVDTFRVASSYSTERQMSHDLVAVG------------RKSENFHPVFEHLDSTQNTENK 466
K VD S+ RQ+S + + RK +F + E + +N + +
Sbjct: 1464 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI---RNHKYR 1520
Query: 467 PTGEFAQEIITIIHQVKANYFPSPGITLHERFSTMQDIHKADVNEIPLNSDPEIHRRIDM 526
+ ++++ + A F G ++E +Q + + +I D E +
Sbjct: 1521 SLNDLEKDVMLLCQ--NAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEE 1578
Query: 527 SLAELQSKQAVIYESEQTLIKIIDPNDLRHDIERRRKERLQN 568
E + ESE +K+ I+ RKE+ Q+
Sbjct: 1579 EEGEEEGS-----ESESRSVKV--------KIKLGRKEKAQD 1607
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 36.6 bits (83), Expect = 0.079
Identities = 92/462 (19%), Positives = 160/462 (34%), Gaps = 113/462 (24%)
Query: 125 HERNSYPQKVQGGHSPDDHRVRGSGKGGK------PPQRSIADSFRFEGKWHEDELRHQR 178
HER ++ Q + D+ R +G G PP + EDE+
Sbjct: 1241 HERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVP--- 1297
Query: 179 IQEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESREPARNPKW 238
+E +Q R E+F+ + D R E+R P R P+
Sbjct: 1298 -DDETVNQMIARHEEEFDL-------------------FMRMDLDRRREEARNPKRKPRL 1337
Query: 239 KPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLLDGDQDFSDG 298
E LP + D ER E RH++ + D+SD
Sbjct: 1338 MEEDELPSWIIKDD---------AEVERLTCEEEEEKMFGRGSRHRK------EVDYSDS 1382
Query: 299 RTQKYCKEEDRKYSFQKGPLNRELDCFNTGRGRETQDGQVKEPFKPSKKDSIACTYSNKN 358
T+K + + ++G L E++ ++ + K+ + K+DS A + +
Sbjct: 1383 LTEKQWLK-----AIEEGTL-EEIE----------EEVRQKKSSRKRKRDSDAGSSTPTT 1426
Query: 359 DVDLRSSNDKWKEKIKKEGDCRKESNSSSNQLDKSQKLPDVKPSPINLRKKSLTVKVDVK 418
R +D+ K K KK G E + P+P NL KK +K
Sbjct: 1427 STRSRDKDDESK-KQKKRGRPPAEK---------------LSPNPPNLTKK-------MK 1463
Query: 419 KTVDTFRVASSYSTERQMSHDLVAVG------------RKSENFHPVFEHLDSTQNTENK 466
K VD S+ RQ+S + + RK +F + E + +N + +
Sbjct: 1464 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI---RNHKYR 1520
Query: 467 PTGEFAQEIITIIHQVKANYFPSPGITLHERFSTMQDIHKADVNEIPLNSDPEIHRRIDM 526
+ ++++ + A F G ++E +Q + + +I D E +
Sbjct: 1521 SLNDLEKDVMLLCQ--NAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEE 1578
Query: 527 SLAELQSKQAVIYESEQTLIKIIDPNDLRHDIERRRKERLQN 568
E + ESE +K+ I+ RKE+ Q+
Sbjct: 1579 EEGEEEGS-----ESESRSVKV--------KIKLGRKEKAQD 1607
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 36.6 bits (83), Expect = 0.079
Identities = 49/218 (22%), Positives = 83/218 (38%), Gaps = 10/218 (4%)
Query: 169 WHEDELRHQRIQEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYE 228
W + +R E + R SE + R +KR E RK K K + E
Sbjct: 34 WQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKE 93
Query: 229 SRE--PARNPKWKPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRP 286
RE R K E ++ ++ G + ERE E + R K
Sbjct: 94 ERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEE 153
Query: 287 KLLDGDQDFSDGRTQKYC--KEEDRKYSFQKGPLNRELDCFNTGRGRETQDGQVKEPFKP 344
+ + ++ R +K KEE+RK +K RE + + RE ++ + ++ +
Sbjct: 154 REKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERK 213
Query: 345 SKKDSIACTYSNKNDVDLRSSNDKWKEKIKKEGDCRKE 382
K++ K R +N + KE+ K+E RK+
Sbjct: 214 KKEE------RKKERQKDRQTNWREKERGKRERKERKK 245
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 36.2 bits (82), Expect = 0.10
Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 13/152 (8%)
Query: 147 GSGKGGKPPQRSIADSFRFEGKWHEDELRHQRIQEEKYSQSTRRGSEDFETRSSFQKRY- 205
G G PP A R+E + +R E RG+ F+ + + Y
Sbjct: 111 GGGPAYGPPPSLHAREGRYERRLDGASDNRERAYEHSAYGHHERGTGGFDRTRHYDQDYY 170
Query: 206 --PEDRDFRKYGHTSKRPKDVERYESREPARNPKWKPEHSLPP------YQEDTDQWNLG 257
P +R + + + R + R+++ +P P+ + + +LP Y++D + G
Sbjct: 171 RDPRERTLQHGLYYASRSRSPNRFDAHDPRYEPRAREQFTLPSVVHRDIYRDDITREVRG 230
Query: 258 PQTYRHAEREHPETSSATKVSYDYRHKRPKLL 289
R ER + + S + S R++ P+ L
Sbjct: 231 ----RRPERNYQHSRSRSPHSSQSRNQSPQRL 258
Score = 33.1 bits (74), Expect = 0.87
Identities = 45/220 (20%), Positives = 82/220 (37%), Gaps = 29/220 (13%)
Query: 165 FEGKWHEDELRHQRIQEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDV 224
+E ++++D ++ + + Y Q R S R ++R+ DRD +RP +
Sbjct: 669 YESRYYDDPREYRDYRNDPYEQDIREYSYRQRERERERERFESDRD----RDHERRP--I 722
Query: 225 ERYESREPARNPKWKPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHK 284
ER +S R P+ P Q + + + Y + SS + Y+ K
Sbjct: 723 ERSQSPVHLRRPQ---SPGASPSQAERLPSDSERRLYSRSSDRSGSCSSLSPPRYEKLDK 779
Query: 285 RPKLLDGDQDFSDGRTQKYCKEE--DRKYSFQKGPLNRELDCFNTGRGRETQDGQVKEPF 342
R ++Y K E D++ +F + RE + + + + K
Sbjct: 780 -------------SRLERYTKNEKTDKERTFDPERVERERRLIRKEKVEKDKTDKQKRKG 826
Query: 343 KPSKKDSIACTYSNKNDVDL-----RSSNDKWKEKIKKEG 377
K S + +N+ + RS N +EK KEG
Sbjct: 827 KVHSPSSQSSETDQENEREQSPEKPRSCNKLSREKADKEG 866
>gi|14149807 coiled-coil domain containing 55 isoform 1 [Homo
sapiens]
Length = 558
Score = 36.2 bits (82), Expect = 0.10
Identities = 50/234 (21%), Positives = 89/234 (38%), Gaps = 61/234 (26%)
Query: 170 HEDELRHQRIQEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYES 229
H H R E+ STR ++ T +KR ED+ H K+ +D E + +
Sbjct: 282 HHRSQNHSRSPSEERGHSTRHHTKGSRTSRGHEKR--EDQ------HQQKQSRDQENHYT 333
Query: 230 REPARNPKWKPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKVSYDYRHKRPKLL 289
R + H +++ W RH + + P + D R + ++
Sbjct: 334 DRDYRKERDSHRHREASHRD--SHWK------RHEQEDKPR-------ARDQRERSDRVW 378
Query: 290 DGDQDFSDGRTQKYC---KEEDRKYSFQKGPLNRELDCFNTGRGRETQDGQVKEPFKPSK 346
++D +KY +E DR+ + Q P + +G + + + KE +
Sbjct: 379 KREKD-----REKYSQREQERDRQQNDQNRP---------SEKGEKEEKSKAKEEHMKVR 424
Query: 347 KDSIACTYSNKNDVDLRSSNDKWKEKIKKE--------GDCRKESNSSSNQLDK 392
K+ Y N NDK++++ K+E RKES+ +S DK
Sbjct: 425 KE----RYEN---------NDKYRDREKREVGVQSSERNQDRKESSPNSRAKDK 465
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 36.2 bits (82), Expect = 0.10
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 18/220 (8%)
Query: 141 DDHRVRGSGKGGKPPQRSIADSFRFEGKWHEDELRHQRIQEEKYSQSTRRGSEDFETRSS 200
DDH + G + ++ + K E+ R +R+++EK + R + E
Sbjct: 209 DDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDRDERLKKEKQEREEREKEREREREER 268
Query: 201 FQKRYPEDRDFRKY----GHTSKRPKDVERYESREPARNPKWKPEHSLPPYQE---DTDQ 253
+KR E+ + K KR + R+ SR R +H +E +
Sbjct: 269 ERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSR 328
Query: 254 WNLGPQTYRHAEREHPETS-----SATKVSYDYRHKRPKLLDGDQDFSDGRTQKYCKEED 308
+++ +ER+H S S ++ Y+H R K D +QD +K +D
Sbjct: 329 DRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKH-RSKSRDREQDRKSKEKEKR-GSDD 386
Query: 309 RKYSFQKGPLNRELDCFNTGRGRETQDGQVKEPFKPSKKD 348
+K S + G ++ + NT E+++ K + +D
Sbjct: 387 KKSSVKSGSREKQSEDTNT----ESKESDTKNEVNGTSED 422
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.131 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,684,055
Number of Sequences: 37866
Number of extensions: 1525693
Number of successful extensions: 4066
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 3850
Number of HSP's gapped (non-prelim): 347
length of query: 682
length of database: 18,247,518
effective HSP length: 109
effective length of query: 573
effective length of database: 14,120,124
effective search space: 8090831052
effective search space used: 8090831052
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.