Guide to the Human Genome
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Search of human proteins with 224451133

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
         (1132 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ...  2348   0.0  
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [...  2338   0.0  
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ...  2281   0.0  
gi|62460633 RNA-binding motif protein 16 [Homo sapiens]               648   0.0  
gi|160707881 formin 2 [Homo sapiens]                                  119   2e-26
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...   114   5e-25
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]    110   1e-23
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...   104   5e-22
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ...   101   4e-21
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]                    100   8e-21
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]                    100   8e-21
gi|146134388 YLP motif containing 1 [Homo sapiens]                    100   1e-20
gi|163965366 nascent polypeptide-associated complex alpha subuni...    99   2e-20
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]               97   7e-20
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre...    96   3e-19
gi|150417989 cyclin K isoform 1 [Homo sapiens]                         94   7e-19
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    91   8e-18
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    91   8e-18
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    90   1e-17
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]               90   1e-17
gi|151301053 RNA binding motif protein 33 [Homo sapiens]               90   1e-17
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]                90   1e-17
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]          90   1e-17
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]          90   1e-17
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]          90   1e-17
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]       89   2e-17
gi|47132519 Ras association and pleckstrin homology domains 1 is...    89   2e-17
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]       88   5e-17
gi|55750053 atrophin-1 [Homo sapiens]                                  87   9e-17
gi|55750041 atrophin-1 [Homo sapiens]                                  87   9e-17

>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 [Homo
            sapiens]
          Length = 1132

 Score = 2348 bits (6084), Expect = 0.0
 Identities = 1132/1132 (100%), Positives = 1132/1132 (100%)

Query: 1    MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKCKPEYKVPGLYVIDSIVRQSRH 60
            MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKCKPEYKVPGLYVIDSIVRQSRH
Sbjct: 1    MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKCKPEYKVPGLYVIDSIVRQSRH 60

Query: 61   QFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMA 120
            QFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMA
Sbjct: 61   QFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMA 120

Query: 121  AGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQT 180
            AGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQT
Sbjct: 121  AGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQT 180

Query: 181  TQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKT 240
            TQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKT
Sbjct: 181  TQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKT 240

Query: 241  AFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPP 300
            AFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPP
Sbjct: 241  AFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPP 300

Query: 301  PQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPP 360
            PQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPP
Sbjct: 301  PQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPP 360

Query: 361  FPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSR 420
            FPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSR
Sbjct: 361  FPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSR 420

Query: 421  SRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGL 480
            SRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGL
Sbjct: 421  SRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGL 480

Query: 481  PQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQD 540
            PQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQD
Sbjct: 481  PQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQD 540

Query: 541  AYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKPEELESF 600
            AYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKPEELESF
Sbjct: 541  AYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKPEELESF 600

Query: 601  CEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPI 660
            CEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPI
Sbjct: 601  CEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPI 660

Query: 661  TVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLP 720
            TVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLP
Sbjct: 661  TVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLP 720

Query: 721  PGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGN 780
            PGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGN
Sbjct: 721  PGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGN 780

Query: 781  AESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPG 840
            AESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPG
Sbjct: 781  AESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPG 840

Query: 841  LIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPF 900
            LIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPF
Sbjct: 841  LIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPF 900

Query: 901  VRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPP 960
            VRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPP
Sbjct: 901  VRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPP 960

Query: 961  TQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGR 1020
            TQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGR
Sbjct: 961  TQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGR 1020

Query: 1021 RSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPEVTDRAGGNKTVEP 1080
            RSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPEVTDRAGGNKTVEP
Sbjct: 1021 RSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPEVTDRAGGNKTVEP 1080

Query: 1081 PISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSGSAAEAPR 1132
            PISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSGSAAEAPR
Sbjct: 1081 PISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSGSAAEAPR 1132


>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [Homo
            sapiens]
          Length = 1147

 Score = 2338 bits (6058), Expect = 0.0
 Identities = 1132/1147 (98%), Positives = 1132/1147 (98%), Gaps = 15/1147 (1%)

Query: 1    MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIK---------------CKPEYKV 45
            MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIK               CKPEYKV
Sbjct: 1    MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60

Query: 46   PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 105
            PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
Sbjct: 61   PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120

Query: 106  GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQL 165
            GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQL
Sbjct: 121  GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQL 180

Query: 166  PSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQ 225
            PSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQ
Sbjct: 181  PSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQ 240

Query: 226  PSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTA 285
            PSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTA
Sbjct: 241  PSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTA 300

Query: 286  TVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLP 345
            TVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLP
Sbjct: 301  TVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLP 360

Query: 346  PNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPC 405
            PNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPC
Sbjct: 361  PNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPC 420

Query: 406  IQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQE 465
            IQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQE
Sbjct: 421  IQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQE 480

Query: 466  RRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMI 525
            RRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMI
Sbjct: 481  RRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMI 540

Query: 526  PPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVT 585
            PPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVT
Sbjct: 541  PPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVT 600

Query: 586  YIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPK 645
            YIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPK
Sbjct: 601  YIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPK 660

Query: 646  PLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPP 705
            PLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPP
Sbjct: 661  PLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPP 720

Query: 706  PPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLS 765
            PPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLS
Sbjct: 721  PPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLS 780

Query: 766  IGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVI 825
            IGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVI
Sbjct: 781  IGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVI 840

Query: 826  GLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMP 885
            GLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMP
Sbjct: 841  GLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMP 900

Query: 886  PPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQ 945
            PPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQ
Sbjct: 901  PPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQ 960

Query: 946  QQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRN 1005
            QQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRN
Sbjct: 961  QQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRN 1020

Query: 1006 DDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEK 1065
            DDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEK
Sbjct: 1021 DDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEK 1080

Query: 1066 PEVTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSG 1125
            PEVTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSG
Sbjct: 1081 PEVTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSG 1140

Query: 1126 SAAEAPR 1132
            SAAEAPR
Sbjct: 1141 SAAEAPR 1147


>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 [Homo
            sapiens]
          Length = 1125

 Score = 2281 bits (5910), Expect = 0.0
 Identities = 1109/1147 (96%), Positives = 1110/1147 (96%), Gaps = 37/1147 (3%)

Query: 1    MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIK---------------CKPEYKV 45
            MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIK               CKPEYKV
Sbjct: 1    MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60

Query: 46   PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 105
            PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
Sbjct: 61   PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120

Query: 106  GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQL 165
            GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQL
Sbjct: 121  GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQL 180

Query: 166  PSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQ 225
            PSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQ
Sbjct: 181  PSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQ 240

Query: 226  PSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTA 285
            PSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTA
Sbjct: 241  PSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTA 300

Query: 286  TVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLP 345
            TVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLP
Sbjct: 301  TVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLP 360

Query: 346  PNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPC 405
            PNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPC
Sbjct: 361  PNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPC 420

Query: 406  IQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQE 465
            IQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQE
Sbjct: 421  IQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQE 480

Query: 466  RRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMI 525
            RRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMI
Sbjct: 481  RRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMI 540

Query: 526  PPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVT 585
            PPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVT
Sbjct: 541  PPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVT 600

Query: 586  YIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPK 645
            YIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPK
Sbjct: 601  YIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPK 660

Query: 646  PLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPP 705
            PLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPP
Sbjct: 661  PLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPP 720

Query: 706  PPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLS 765
            PPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPN               
Sbjct: 721  PPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPN--------------- 765

Query: 766  IGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVI 825
                   +VSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVI
Sbjct: 766  -------LVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVI 818

Query: 826  GLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMP 885
            GLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMP
Sbjct: 819  GLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMP 878

Query: 886  PPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQ 945
            PPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQ
Sbjct: 879  PPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQ 938

Query: 946  QQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRN 1005
            QQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRN
Sbjct: 939  QQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRN 998

Query: 1006 DDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEK 1065
            DDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEK
Sbjct: 999  DDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEK 1058

Query: 1066 PEVTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSG 1125
            PEVTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSG
Sbjct: 1059 PEVTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSG 1118

Query: 1126 SAAEAPR 1132
            SAAEAPR
Sbjct: 1119 SAAEAPR 1125


>gi|62460633 RNA-binding motif protein 16 [Homo sapiens]
          Length = 1271

 Score =  648 bits (1672), Expect = 0.0
 Identities = 483/1278 (37%), Positives = 640/1278 (50%), Gaps = 276/1278 (21%)

Query: 1    MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIK---------------CKPEYKV 45
            M+AV  FN EL+SL D KPPIS+AKM  ITKAAIKAIK               CKPEYKV
Sbjct: 1    MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60

Query: 46   PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 105
            PGLYVIDSIVRQSRHQFG +KDVF PRFS NI +TFQ LY CP +DKSKIVRVLNLWQKN
Sbjct: 61   PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120

Query: 106  GVFKIEIIQPLLDMAAG------TSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSV 159
             VFK EIIQPLLDMAAG      T   A     ++N  G+P  PV  ++    Q  P+  
Sbjct: 121  NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPGTPVTPVTPANV--VQGLPD-- 176

Query: 160  PAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQ-QPPKPQSP---ALDNAVMAQVQAI 215
            P V Q+ ++D  AAVAQ+ Q+ QGQQLQQ++QT Q Q  KPQ     ALD  ++ Q+QA+
Sbjct: 177  PWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQAL 236

Query: 216  TAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAP 275
            TAQL    T  +       P EQ  +F+KKL+DRFD+ ++ E  EE KKE          
Sbjct: 237  TAQL----TAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKE---------- 282

Query: 276  AAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQ 335
                       +PA+   +  S     + F    + +QQ      QN++  + +++  QQ
Sbjct: 283  -----------IPASQL-SHVSESVNNSIFHQIAEQLQQ------QNLEHLRQQLLEQQQ 324

Query: 336  DPMHHQVPLPPNGQMPGFGL--LPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQK 393
                 Q   P + Q   FG     +P      Q  + P   V        Q Q+  + + 
Sbjct: 325  P----QKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPE--VNLDDSIDIQQQDMDIDEG 378

Query: 394  PHQQEMEVEQPCIQEVKRHMSDNR-KSRSRSASRSPKRRRSRSGSRSRRSRHR-RSRSRS 451
                E EV +   QE K+    +R ++ SRS SRSP++RRSRS S SR+ +HR RSRSRS
Sbjct: 379  QDGVEEEVFE---QEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRS 435

Query: 452  RDRRRHSPRSRSQERRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVAS 511
            R+R+R S RS S ERR RE+E+ER++KGLP ++ +T SVCSTTLWVGQ+DK+ TQQD+ +
Sbjct: 436  RERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTN 495

Query: 512  LLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIK 571
            L EEFG IESINMIPPRGCAY+ MVHRQDA+RALQKLS G+YK+  K IKIAWALNKG+K
Sbjct: 496  LFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVK 555

Query: 572  ADYKQYWDVELGVTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGI-PKKPENEVAQNG 630
             +YKQ+WDV+LGVTYIPW+KVK ++LE F EGGM+D +T+N +W+ +   +P  E  Q  
Sbjct: 556  TEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQT- 614

Query: 631  GAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLG 690
                  T+  +P+ K   V       P P+ +   Q+P   P  P V +L PPAF   + 
Sbjct: 615  ------TQSPTPVEKETVVTTQAEVFPPPVAM--LQIPV-APAVPTV-SLVPPAFPVSMP 664

Query: 691  IPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPN 750
            +PPPGF      P PPPPFLR  FNP   PPGF+PP  PPP+ PP +IPP    P S+  
Sbjct: 665  VPPPGFS-----PIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPP--VVPTSLVQ 717

Query: 751  STIAGINEDTTKDLSIGN-----------------PIPTVVSGARGNAESGDSV------ 787
             +++ +  +T KD+  G+                 P   V +     AE  + V      
Sbjct: 718  PSLS-MTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDH 776

Query: 788  -----KMYGSAVPPAAPTNL-----PTPPVTQPVSLLGTQ-----------GVAPGPV-- 824
                 +   S +P    +N        P VT    +LG Q           GV P  V  
Sbjct: 777  QISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSS 836

Query: 825  ------------------IGLQAP----STGLLGA---------------------RPGL 841
                              +G+Q P    S+GLLG                       PGL
Sbjct: 837  SSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGL 896

Query: 842  IPLQRPPG---MPPPHL--QRFPLMPPRPMPPHMMHRGPPPG--------PGGFAMPPPH 888
            +  Q P G   +PP  +  QR P MP   + P ++ + P P         P    +PPP 
Sbjct: 897  LGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPS 956

Query: 889  GM--------KGPFP-------PHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQ 933
             +        +GPFP       P  PF+ PG         P    P   D  QQ   +  
Sbjct: 957  VLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDY 1016

Query: 934  QQPQPQAPQQPQQQQQQQPPPSQ------QPPPTQQQPQQFRNDNRQQFNSGRDQ----- 982
            + P  +      ++   +PPP        +P   ++ P +   D R  F  GR       
Sbjct: 1017 RFPPIET-----RESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHF--GRPPVDIRE 1069

Query: 983  -------ERFGRRS-FGNRVENDRERYGNRNDDRDNSNRDRREWG--------------- 1019
                   +  GRR  FG    N  + +G+R D  +  +R    +G               
Sbjct: 1070 NLVRPGIDHLGRRDHFG---FNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEERGRFRSG 1126

Query: 1020 -----------RRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEAR-GKEKPE 1067
                        R   ++ HRD ++R R     R R+RD RD +  RE    R G+++ +
Sbjct: 1127 NYRFDPRSGPWNRGFGQEVHRDFDDRRR--PWERQRDRDDRDFDFCREMNGNRLGRDRIQ 1184

Query: 1068 VTDRAGGNKTVEPPISQV 1085
                   N  V PP ++V
Sbjct: 1185 -------NTWVPPPHARV 1195



 Score = 39.7 bits (91), Expect = 0.016
 Identities = 47/201 (23%), Positives = 77/201 (38%), Gaps = 20/201 (9%)

Query: 933  QQQPQPQAPQQPQQQ---QQQQPPPSQQPPPTQQ---QPQQFRNDN----RQQFNSGRDQ 982
            QQQPQ   PQ  Q+     +    PSQ    +QQ   +P+   +D+    +Q  +    Q
Sbjct: 322  QQQPQKATPQDSQEGTFGSEHSASPSQGS--SQQHFLEPEVNLDDSIDIQQQDMDIDEGQ 379

Query: 983  ERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHR 1042
            +      F    +    R  +R   R  S   R+   RRS  R   R  + R R  S  R
Sbjct: 380  DGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRK---RRSRSRSGSRKRKHRKRSRSRSR 436

Query: 1043 DRERD-----SRDRESRREKEEARGKEKPEVTDRAGGNKTVEPPISQVGNVDTASELEKG 1097
            +R+R      S +R +R  ++E + K  P +  +     +    + QV    T  +L   
Sbjct: 437  ERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNL 496

Query: 1098 VSEAAVLKPSEELPAEATSSV 1118
              E   ++    +P    + V
Sbjct: 497  FEEFGQIESINMIPPRGCAYV 517


>gi|160707881 formin 2 [Homo sapiens]
          Length = 1722

 Score =  119 bits (298), Expect = 2e-26
 Identities = 129/383 (33%), Positives = 155/383 (40%), Gaps = 80/383 (20%)

Query: 637  TEPVSPIPKPLP---VPVPPIPVPAPITVPPPQVPPH--QPGPPVVGALQPPAFTPPL-- 689
            TE + P P PLP   +P PP P+P    +P P +P     P PP+ GA  PP   PPL  
Sbjct: 905  TEMLPPPPPPLPGAGIPPPP-PLPGAGILPLPPLPGAGIPPPPPLPGAAIPP--PPPLPG 961

Query: 690  ---GIPPPGFGPGVPPPPP------PPPFLRPGFN---PMHLPPGFLPPG--------PP 729
                +PPP  G G+PPPPP      PPP   PG     P  LP   +PP         PP
Sbjct: 962  AGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1021

Query: 730  PPITPPVSIPPPH-------TPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAE 782
            PP  P   IPPP         PP  +P    AGI          G P P  + G    A 
Sbjct: 1022 PPPLPGAGIPPPPPLPGAGIPPPPPLPG---AGIPPPPPLP-GAGIPPPPPLPG----AG 1073

Query: 783  SGDSVKMYGSAVPPAAP---TNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARP 839
                  + G+ +PP  P     +P PP   P+  +G     P P  G+  P   L GA  
Sbjct: 1074 IPPPPPLPGAGIPPPPPLPGAGIPPPP---PLPGVGIPPPPPLPGAGIPPPPP-LPGA-- 1127

Query: 840  GLIPLQRPPGM---PPPHLQRFPLMPPRPM-------PPHMMHRG--PPPGPGGFAMPPP 887
            G+ P    PG    PPP L R  + PP P+       PP +   G  PPP   G  +PPP
Sbjct: 1128 GIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPP 1187

Query: 888  HGMKG---PFPPHGP---FVRPGGMPGLG-GPGPGPGGPEDRDGRQQPPQQPQQQPQPQA 940
              + G   P PP  P      P  +PG+G  P P P  P    G   PP  P   P    
Sbjct: 1188 PPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLPVSGP---- 1243

Query: 941  PQQPQQQQQQQPPPSQ---QPPP 960
            P  PQ      P P      PPP
Sbjct: 1244 PLLPQVGSSTLPTPQVCGFLPPP 1266



 Score =  103 bits (257), Expect = 9e-22
 Identities = 129/394 (32%), Positives = 147/394 (37%), Gaps = 79/394 (20%)

Query: 633  ETSHTEPVSP-------IPKPLPVP-------------VPPIPVPAP-ITVPP------P 665
            +TSH   VS        IP P P+P             VPP P P P +TVP       P
Sbjct: 838  QTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIP 897

Query: 666  QVPPHQ-------PGPPVVGA-LQPPAFTPPLGIPPPGFGPGVPPPPP--------PPPF 709
            Q PP Q       P PP+ GA + PP   P  GI P    PG   PPP        PPP 
Sbjct: 898  QPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPP 957

Query: 710  LRPGFNPMHLPPGFLPPG-PPPPITPPVSIPPPH-------TPPISIPNSTIAGINEDTT 761
              PG   + LPP     G PPPP  P   IPPP         PP  +P    AGI     
Sbjct: 958  PLPGAG-IPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG---AGIPPPPP 1013

Query: 762  KDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAP---TNLPTPPVTQPVSLLGTQG 818
                 G P P  + G    A       + G+ +PP  P     +P PP   P+   G   
Sbjct: 1014 LP-GAGIPPPPPLPG----AGIPPPPPLPGAGIPPPPPLPGAGIPPPP---PLPGAGIPP 1065

Query: 819  VAPGPVIGLQAPSTGLLGARPGLIPLQRPPGM---PPPHLQRFPLMPPRPMPPHMMHRGP 875
              P P  G+  P   L GA  G+ P    PG    PPP L    + PP P+P   +   P
Sbjct: 1066 PPPLPGAGIPPPPP-LPGA--GIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGI-PPP 1121

Query: 876  PPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQ 935
            PP PG    PPP       PP  P  R G  P    PG G   P    G   PP  P   
Sbjct: 1122 PPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPP--PPPL 1179

Query: 936  PQPQAPQQPQQQQQQQPPPSQQP----PPTQQQP 965
            P    P  P       PPP   P    PP    P
Sbjct: 1180 PGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLP 1213



 Score = 94.4 bits (233), Expect = 6e-19
 Identities = 90/283 (31%), Positives = 108/283 (38%), Gaps = 70/283 (24%)

Query: 617  GIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPIT---VPPPQVPPHQ-- 671
            GIP  P        G       P + IP P P+P   IP P P+    +PPP   P    
Sbjct: 1040 GIPPPPP---LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1096

Query: 672  -PGPPVVGA-LQPPAFTPPLGIPPPGF--GPGVPPP--------PPPPPFLRPGFNPMHL 719
             P PP+ G  + PP   P  GIPPP    G G+PPP        PPPPP  R G  P   
Sbjct: 1097 PPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPP--- 1153

Query: 720  PPGFLPPG-PPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGAR 778
            PP     G PPPP  P   IPPP  PP+                   +G P P  + G  
Sbjct: 1154 PPPLPGAGIPPPPPLPGAGIPPP--PPLP-----------------GVGIPPPPPLPGV- 1193

Query: 779  GNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGAR 838
                           +PP  P  LP   +  P  L G  G+ P P   L  P TG+    
Sbjct: 1194 --------------GIPPPPP--LPGAGIPPPPPLPG-MGIPPAPAPPLPPPGTGI--PP 1234

Query: 839  PGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGG 881
            P L+P+  PP +P       P        P +    PPP P G
Sbjct: 1235 PPLLPVSGPPLLPQVGSSTLP-------TPQVCGFLPPPLPSG 1270



 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 37/116 (31%), Positives = 44/116 (37%), Gaps = 12/116 (10%)

Query: 275  PAAAVPPAP----TATVPAAAAPAAASPPPPQAPF-------GFPGDGMQQPAYTQHQNM 323
            P A +PP P        P    P A  PPPP  P          PG G+  P       +
Sbjct: 1070 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGI 1129

Query: 324  DQFQPRM-MGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQP 378
                P    GI   P   +V +PP   +PG G+ P PP P    P  PP P V  P
Sbjct: 1130 PPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIP 1185



 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 35/109 (32%), Positives = 43/109 (39%), Gaps = 9/109 (8%)

Query: 275  PAAAVPPAP----TATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPR- 329
            P A +PP P        P    P A  PPPP      PG G+  P       +    P  
Sbjct: 1092 PGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPP----LPGAGIPPPPPLPGAGIPPPPPLP 1147

Query: 330  MMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQP 378
             +GI   P      +PP   +PG G+ P PP P +  P  PP P V  P
Sbjct: 1148 RVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIP 1196



 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 275  PAAAVPPAP----TATVPAAAAPAAASPPPPQAPF-------GFPGDGMQQPAYTQHQNM 323
            P A +PP P        P    P A  PPPP  P          PG G+  P       +
Sbjct: 1114 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGI 1173

Query: 324  DQFQPRM-MGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQP 378
                P   +GI   P    V +PP   +PG G+ P PP P M  P   P PP+  P
Sbjct: 1174 PPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPP-APAPPLPPP 1228



 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 9/109 (8%)

Query: 275  PAAAVPPAP----TATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRM 330
            P A +PP P        P    P A  PPPP      PG G+  P       +    P  
Sbjct: 1004 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP----LPGAGIPPPPPLPGAGIPPPPPLP 1059

Query: 331  -MGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQP 378
              GI   P      +PP   +PG G+ P PP P    P  PP P V  P
Sbjct: 1060 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIP 1108



 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 34/111 (30%), Positives = 41/111 (36%), Gaps = 12/111 (10%)

Query: 275  PAAAVPPAP----TATVPAAAAPAAASPPPPQAPFG-------FPGDGMQQPAYTQHQNM 323
            P A +PP P       +P    P A  PPPP  P          PG G+  P       +
Sbjct: 916  PGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGI 975

Query: 324  DQFQPRM-MGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTP 373
                P    GI   P      +PP   +PG G+ P PP P    P  PP P
Sbjct: 976  PPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1026



 Score = 48.1 bits (113), Expect = 5e-05
 Identities = 34/104 (32%), Positives = 41/104 (39%), Gaps = 9/104 (8%)

Query: 279  VPPAPTATVPAAAA-PAAASPPPPQAPFG-------FPGDGMQQPAYTQHQNMDQFQPRM 330
            +PP P A +P     P AA PPPP  P          PG G+  P       +    P  
Sbjct: 934  LPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLP 993

Query: 331  -MGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTP 373
              GI   P      +PP   +PG G+ P PP P    P  PP P
Sbjct: 994  GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1037



 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 66/259 (25%), Positives = 87/259 (33%), Gaps = 35/259 (13%)

Query: 139 SPPPPVKVSSEPPTQATPNSVPAVPQLPSSDA--FAAVAQLFQTTQGQQLQ----QILQT 192
           SP     V + PP    P   P  P   S     F +   L  + +   +Q    Q  Q+
Sbjct: 747 SPTEEGGVLTLPPVDGLPGRPPCPPGAESGPQTKFCSEISLIVSPRRISVQLDSHQPTQS 806

Query: 193 FQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDY 252
             QPP P S  L +A   Q  +      +T  Q S + +        +AF          
Sbjct: 807 ISQPPPPPS-LLWSAGQGQPGSQPPHSISTEFQTSHEHSV------SSAFKNSC--NIPS 857

Query: 253 DDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPP-------PQAPF 305
                  E S       +    P    PP P  TVP   + A   PPP       P  P 
Sbjct: 858 PPPLPCTESSSSMPGLGMVPPPP----PPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPP 913

Query: 306 GFPGDGMQQPAYTQHQNMDQFQPRM-MGIQQDPMHHQVPLPPNGQMPGFGL-----LP-- 357
             PG G+  P       +    P    GI   P      +PP   +PG G+     LP  
Sbjct: 914 PLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGA 973

Query: 358 -TPPFPPMAQPVIPPTPPV 375
             PP PP+    IPP PP+
Sbjct: 974 GIPPPPPLPGAGIPPPPPL 992



 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 37/113 (32%), Positives = 44/113 (38%), Gaps = 14/113 (12%)

Query: 275  PAAAVPPAP----TATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRM 330
            P A +PP P        P    P A  PPPP      PG G+  P       +    P  
Sbjct: 1136 PGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPP----LPGAGIPPPPPLPGVGIPPPPPLP 1191

Query: 331  -MGIQQDPMHHQVPLPPNGQMPGFGL--LPTPPFPPMAQPVIPPTP--PVQQP 378
             +GI   P      +PP   +PG G+   P PP PP     IPP P  PV  P
Sbjct: 1192 GVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTG-IPPPPLLPVSGP 1243



 Score = 41.2 bits (95), Expect = 0.006
 Identities = 63/285 (22%), Positives = 96/285 (33%), Gaps = 58/285 (20%)

Query: 139 SPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQ--- 195
           S PP  +   E     + ++V   PQ  S      V  +    Q   +QQ+ QT +    
Sbjct: 629 SKPPDEEHRLEDAETESQSAVSETPQKRSDAVQKEVVDMKSEGQATVIQQLEQTIEDLRT 688

Query: 196 ---PPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDY 252
                + Q PALD  V +  Q     L+   T   +        E+K     ++L     
Sbjct: 689 KIAELERQYPALDTEVASGHQG----LENGVTASGDVCLEALRLEEKEVRHHRIL----- 739

Query: 253 DDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAP------------------- 293
             E ++++ S  E+   V T  P   +P  P     A + P                   
Sbjct: 740 --EAKSIQTSPTEEG-GVLTLPPVDGLPGRPPCPPGAESGPQTKFCSEISLIVSPRRISV 796

Query: 294 ---------AAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQ--V 342
                    + + PPPP +     G G Q  +   H    +FQ            +   +
Sbjct: 797 QLDSHQPTQSISQPPPPPSLLWSAGQG-QPGSQPPHSISTEFQTSHEHSVSSAFKNSCNI 855

Query: 343 PLPP-------NGQMPGFGLLPTPP--FPPMAQPVIPPTPPVQQP 378
           P PP       +  MPG G++P PP   P M  P +P T   Q P
Sbjct: 856 PSPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPP 900



 Score = 41.2 bits (95), Expect = 0.006
 Identities = 36/113 (31%), Positives = 42/113 (37%), Gaps = 23/113 (20%)

Query: 275  PAAAVPPAP----TATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRM 330
            P A +PP P        P    P    PPPP      PG G+  P       +    P  
Sbjct: 1158 PGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPP----LPGVGIPPPPPLPGAGIPPPPPLP 1213

Query: 331  -MGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIP-------PTPPV 375
             MGI   P     PLPP    PG G+ P P  P    P++P       PTP V
Sbjct: 1214 GMGIPPAPAP---PLPP----PGTGIPPPPLLPVSGPPLLPQVGSSTLPTPQV 1259



 Score = 40.4 bits (93), Expect = 0.010
 Identities = 50/185 (27%), Positives = 63/185 (34%), Gaps = 18/185 (9%)

Query: 793 AVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGL-QAP-STGLLGARPGLIPLQRPPGM 850
           A  PAAP   PT    QP + LG      GP  G  +AP S     A   L  L      
Sbjct: 229 AEEPAAP---PTAVSPQPGAFLGLDRFLLGPSGGAGEAPGSPDTEQALSALSDLPESLAA 285

Query: 851 PPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLG 910
            P    R P  PP P    +      P     A   P     PFP  GP     G P  G
Sbjct: 286 EP----REPQQPPSPGGLPVSEAPSLPAAQPAAKDSPSSTAFPFPEAGPGEEAAGAPVRG 341

Query: 911 GPGPGPGGPED--------RDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQ 962
                  G ED          G +  P+  +  PQ +  ++P+++ Q    P+    P  
Sbjct: 342 AGDTDEEGEEDAFEDAPRGSPGEEWAPEVGEDAPQ-RLGEEPEEEAQGPDAPAAASLPGS 400

Query: 963 QQPQQ 967
             P Q
Sbjct: 401 PAPSQ 405



 Score = 33.1 bits (74), Expect = 1.5
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 926 QQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQP--PPTQQQPQ 966
           QQ  +  QQQ Q    Q  QQQQQQQ   +++P  PPT   PQ
Sbjct: 200 QQAIRLQQQQQQQLQLQLQQQQQQQQLQGAEEPAAPPTAVSPQ 242


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score =  114 bits (285), Expect = 5e-25
 Identities = 110/378 (29%), Positives = 136/378 (35%), Gaps = 83/378 (21%)

Query: 634 TSHTEPVSPIPKPLPVPVPPIPV-------PAPITVPPPQVPPHQPGPPVVGALQPPAFT 686
           T H E   P P P P+  PP P+       P+ I  PPPQ PP    PP+ G   PP   
Sbjct: 555 TPHLE-TPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPP--L 611

Query: 687 PPLGIPPPGFGPGVPPPP---PPPPFLRPGFNPMHLPPGFLP----------PGPPPPIT 733
            PL  PPP   P +  PP   PP P   P  +P+  P    P          P  PPP +
Sbjct: 612 SPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP-S 670

Query: 734 PPVSIP--PPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYG 791
           PPV  P  PP +PP+S P++T       +    S+  P   V      +     S     
Sbjct: 671 PPVQAPFSPPASPPVS-PSAT-----PPSQAPPSLAAPPLQVPPSPPASPPMSPS----- 719

Query: 792 SAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMP 851
           +  PP AP  L  PP+  P          P P             A P + P   PP   
Sbjct: 720 ATPPPQAPPPLAAPPLQVP----------PSP------------PASPPMSPSATPPPRV 757

Query: 852 PPHLQRFPLM----PPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGP---FPPHGPFVRPG 904
           PP L   PL     PP  +P   + + PP  P   A PP   +  P   FP   PF    
Sbjct: 758 PPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSA 817

Query: 905 GMPGLGGPGPGPGGPEDRDG-RQQPPQQPQQQPQPQAPQQPQQQQQQ------------- 950
            +P      P P  P        Q P  P   P  QAP++P                   
Sbjct: 818 SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALA 877

Query: 951 ---QPPPSQQPPPTQQQP 965
               PPPS+ P  T   P
Sbjct: 878 PGPPPPPSRSPSSTLSGP 895



 Score = 88.2 bits (217), Expect = 4e-17
 Identities = 111/418 (26%), Positives = 139/418 (33%), Gaps = 104/418 (24%)

Query: 631 GAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLG 690
           G +     P      PLP  +PP P   P+  P P  PP    PP +  L  P  TPP  
Sbjct: 311 GTKARPVPPPDNAATPLPATLPPSP---PLATPLPLAPPSPSAPPSLQTLPSPPATPPSQ 367

Query: 691 IPPPGFGPGVPPPP---------------------PPPPFLRP--------GFNPMHLPP 721
            PP    P +  PP                     PP P            G   +    
Sbjct: 368 APPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATH 427

Query: 722 GFLPPGP-----------PPPITPPVSIPPPHTPPISIPNS-----TIAGINEDTTKDLS 765
            FL   P            P  TPP S  PP   P+S+P S     +++      +  L+
Sbjct: 428 SFLTMSPRQTQASLTSPSRPASTPPDS--PPLQAPLSLPASPPLQTSLSPAVSPLSSPLT 485

Query: 766 IGNPIPTVVSGARGNAESGDS------VKMYGSAVPPA---APTNLPTPPVTQPVSLLGT 816
           I +P+  + S A  + ++  S      ++   S  PP+    P +L TPP+    SL   
Sbjct: 486 I-HPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSL--- 541

Query: 817 QGVAPGPVIGLQAPSTG---LLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHR 873
              AP P+    AP T         P   PLQ PP          PL  P P  P  +  
Sbjct: 542 ---APPPLQTASAPLTTPHLETPPCPAPCPLQAPPS---------PLTTPPPETPSSIAT 589

Query: 874 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRPG-------GMPGLGGPGPGPGGPE----DR 922
            PP  P   A PP  G+  P PP  P   P         +P L  P   P  P       
Sbjct: 590 PPPQAPPALASPPLQGL--PSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLAT 647

Query: 923 DGRQQP----------PQQPQQQPQPQAPQQPQQQQQQQP---PPSQQPPPTQQQPQQ 967
              Q P          P  P   P  QAP  P       P   PPSQ PP     P Q
Sbjct: 648 PSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQ 705



 Score = 87.0 bits (214), Expect = 9e-17
 Identities = 115/416 (27%), Positives = 141/416 (33%), Gaps = 82/416 (19%)

Query: 608 SDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQV 667
           S +  P  + +P  P    +Q   A  S T P    P  L   +PPI VP  +T P  Q 
Sbjct: 347 SPSAPPSLQTLPSPPATPPSQ---APPSMTTPPMQAPPSLQT-IPPIQVPHSLTSPSLQA 402

Query: 668 PPH-----------QPGPPVVGALQP------------------PAFTPPLGIPPPGFGP 698
           PP              G P + A                     PA TPP   PP     
Sbjct: 403 PPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPP-DSPPLQAPL 461

Query: 699 GVPPPPPPPPFLRPGFNPMHLPPGFLP-----------PGPP------PPITPPVSIPPP 741
            +P  PP    L P  +P+  P    P           P  P      PP+    S+ PP
Sbjct: 462 SLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPP 521

Query: 742 --HTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAP 799
              TPP S+    +        ++L    P P   + A       ++          A P
Sbjct: 522 SLQTPPASLTTPPL--------ENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPP 573

Query: 800 TNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFP 859
           + L TPP   P S+      AP P +    P  GL    P L PL  PP   PP L   P
Sbjct: 574 SPLTTPPPETPSSIATPPPQAP-PALA-SPPLQGL--PSPPLSPLATPPPQAPPXLALPP 629

Query: 860 LMPPRPMPPHMMHRGP-----PPGPGGFAMPPPHGMKGPF-PPHGPFVRPGGMPGLGGPG 913
           L  P P PP      P     P  P   A+   H ++ PF PP  P V+    P    P 
Sbjct: 630 LQAP-PSPPASPPLSPLATPSPQAPNALAV---HLLQAPFSPPPSPPVQAPFSP----PA 681

Query: 914 PGPGGPEDRDGRQQPPQ--QPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQ 967
             P  P      Q PP    P  Q  P  P  P       PPP Q PPP    P Q
Sbjct: 682 SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP-QAPPPLAAPPLQ 736



 Score = 74.7 bits (182), Expect = 5e-13
 Identities = 104/376 (27%), Positives = 135/376 (35%), Gaps = 91/376 (24%)

Query: 622  PENEVAQNGGAETSHTEPVSPIPK-PLPVPVPPIPVP---------APITVPPPQVPPHQ 671
            P  +V  +  A    +   +P P+ P P+  PP+ VP         +P   PPP+VPP  
Sbjct: 702  PPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLL 761

Query: 672  PGPPVVGALQPPAFTP--PLGIPPPGFGPGVPPPP----PPPPFLRPGFNPMHLPPGFLP 725
              PP+     PPA  P  PL  PPP   P +  PP    P PP   PG  P   P   LP
Sbjct: 762  AAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFS-PSASLP 820

Query: 726  PGP---PPPITPPV------SIPP----------PHTPPISIPNSTIAGINEDTTKDLSI 766
              P   PPP  PPV       +PP          P  PP   P+++++G     T  L+ 
Sbjct: 821  MSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPR--LTLALAP 878

Query: 767  GNPIP------TVVSGA--RGNAESGDS----VKMYGSAVPPAAPTNLPTPPVTQPVSLL 814
            G P P      + +SG    G++ S  S    ++ Y S     A  +   PP    ++  
Sbjct: 879  GPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAAS---PPPDAELAAC 935

Query: 815  GTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLM-----PPRPMP-P 868
                 + GP     AP     GA PG  PL  PP   P        +     P    P P
Sbjct: 936  HPAAWSRGP-----APPLAFRGA-PGA-PLPWPPATGPGSADGLCTIYETEGPESATPAP 988

Query: 869  HMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMP--------------------- 907
              +  GP PG  G       G  G         R G +P                     
Sbjct: 989  GALDPGPSPGTSGGKAAAGAGA-GASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAA 1047

Query: 908  ---GLGGPGPGPGGPE 920
                 GG G GPGG E
Sbjct: 1048 AEGAAGGSGGGPGGAE 1063



 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 85/319 (26%), Positives = 109/319 (34%), Gaps = 34/319 (10%)

Query: 622 PENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPP-QVPPHQPGPPVVGAL 680
           P ++   +  A      P  P   P+     P P   P    PP QVPP  P  P +   
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMS-- 748

Query: 681 QPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPG-PPPPI----TPP 735
             P+ TPP  +PP    P +  PP PP  L    +P+  PP   PP    PP+    +PP
Sbjct: 749 --PSATPPPRVPPLLAAPPLQVPPSPPASL--PMSPLAKPPPQAPPALATPPLQALPSPP 804

Query: 736 VSIP--PPHTPPISIPNSTIAGINEDTTKDLSI-------GNPIPTVVSGARGNAESGDS 786
            S P   P +P  S+P S +A         L+          P    +   R     G  
Sbjct: 805 ASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPD 864

Query: 787 VKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQR 846
             + G  +  A     P PP   P S L    +A         P   L G   G  P   
Sbjct: 865 TSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEE-LRGYDSG--PEGG 921

Query: 847 PPGMPPPHLQRFPLMPPR----PMPPHMMHRGPP----PGPGGFAMPPPHGMKGPFPPHG 898
               PPP  +     P      P PP +  RG P    P P         G+   +   G
Sbjct: 922 AAASPPPDAELAACHPAAWSRGPAPP-LAFRGAPGAPLPWPPATGPGSADGLCTIYETEG 980

Query: 899 PFVRPGGMPGLGGPGPGPG 917
           P       PG   PGP PG
Sbjct: 981 P-ESATPAPGALDPGPSPG 998



 Score = 70.9 bits (172), Expect = 7e-12
 Identities = 78/288 (27%), Positives = 103/288 (35%), Gaps = 50/288 (17%)

Query: 619  PKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVP-APITVPPPQVPPHQPGPPVV 677
            P  P +              P+   P     P PP  +P +P+  PPPQ PP    PP+ 
Sbjct: 739  PSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQ 798

Query: 678  GALQPPAFTP--------------PLGIPPPGFGPGVPPP---PPPPPFLRPGFNPMHLP 720
                PPA  P              PL  PPP   P +  P    PP P   P       P
Sbjct: 799  ALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRP 858

Query: 721  PGFLPPGPPPPITPP----VSIPPPHTPPISIPNSTIAG--INEDTTKDLSIGNPIPTVV 774
            P    PGP   ++ P       P P  PP   P+ST++G  +   ++   S    +    
Sbjct: 859  P---TPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYD 915

Query: 775  SGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGL 834
            SG  G A +        +A  PAA +  P P    P++  G  G AP P      P+TG 
Sbjct: 916  SGPEGGAAASPPPDAELAACHPAAWSRGPAP----PLAFRGAPG-APLP----WPPATG- 965

Query: 835  LGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMP-PHMMHRGPPPGPGG 881
             G+  GL  +    G            P    P P  +  GP PG  G
Sbjct: 966  PGSADGLCTIYETEG------------PESATPAPGALDPGPSPGTSG 1001



 Score = 54.7 bits (130), Expect = 5e-07
 Identities = 78/374 (20%), Positives = 123/374 (32%), Gaps = 92/374 (24%)

Query: 117 LDMAAGTSNAAPVAENVTNNEGSPPPPVKVS-SEPPTQATPN--SVPAV--------PQL 165
           L +A  + +A P  + + +   +PP     S + PP QA P+  ++P +        P L
Sbjct: 341 LPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSL 400

Query: 166 PSSDAFAAVAQL----------------FQTTQGQQLQQILQTFQQPPK----------- 198
            +  +  A++ L                F T   +Q Q  L +  +P             
Sbjct: 401 QAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAP 460

Query: 199 ---PQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDE 255
              P SP L  ++   V  +++ L   P Q     A+  P    ++     L+       
Sbjct: 461 LSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLET-QSSLA 519

Query: 256 PEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAA----------------AAPAAASPP 299
           P +++      TT      P+ A PP  TA+ P                  A P+  + P
Sbjct: 520 PPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTP 579

Query: 300 PPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLP-- 357
           PP+ P        Q P            P + G+   P+   +  PP    P   L P  
Sbjct: 580 PPETPSSIATPPPQAPPALA-------SPPLQGLPSPPL-SPLATPPPQAPPXLALPPLQ 631

Query: 358 TPPFPPMAQPVI------------------------PPTPPVQQPFQASFQAQNEPLTQK 393
            PP PP + P+                         PP+PPVQ PF         P    
Sbjct: 632 APPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATP 691

Query: 394 PHQQEMEVEQPCIQ 407
           P Q    +  P +Q
Sbjct: 692 PSQAPPSLAAPPLQ 705



 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 76/316 (24%), Positives = 103/316 (32%), Gaps = 66/316 (20%)

Query: 141 PPPVKVSSEP---------------PTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQ 185
           PPP++ +S P               P QA P+ +   P    S       Q         
Sbjct: 543 PPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPP 602

Query: 186 LQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSE---QKAAFPPPEQKTAF 242
           LQ +      P  P SP       A        L+  P+ P+       A P P+   A 
Sbjct: 603 LQGL------PSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNAL 656

Query: 243 DKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASP---- 298
              LL    +   P    ++           +P A+ P +P+AT P+ A P+ A+P    
Sbjct: 657 AVHLLQA-PFSPPPSPPVQAP---------FSPPASPPVSPSATPPSQAPPSLAAPPLQV 706

Query: 299 ---------------PPPQAPFGFPGDGMQ----QPAYTQHQNMDQFQPRMMGIQQDPMH 339
                          PPPQAP       +Q     PA           PR+  +   P  
Sbjct: 707 PPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAP-P 765

Query: 340 HQVPLPPNGQMPGFGLLPTPPFPPMAQPVIP----PTPPV----QQPFQASFQAQNEPLT 391
            QVP  P   +P   L   PP  P A    P    P+PP     Q PF  S      PL 
Sbjct: 766 LQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLA 825

Query: 392 QKPHQQEMEVEQPCIQ 407
             P Q    +  P +Q
Sbjct: 826 TPPPQAPPVLAAPLLQ 841



 Score = 50.4 bits (119), Expect = 9e-06
 Identities = 81/310 (26%), Positives = 97/310 (31%), Gaps = 60/310 (19%)

Query: 693 PPGFGPGVPPPPP----PPPFLRPGFNPMHLPPGFLPPGPPPP----ITPPVSIPPPHTP 744
           PP  G G   PP     P P   PG        G   PGP       I+   ++      
Sbjct: 94  PPASGRGERAPPAKNTSPGPVSSPG-----RASGTTRPGPLGQKGLRISAEETVARGKAT 148

Query: 745 PISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPT 804
                ++  AG   DT+     G P P +   AR +  +G  V      +P  AP+  P 
Sbjct: 149 EAPKRSALSAGARRDTSGPTP-GTPSPAM---ARRSRAAGTEV-----GLPRPAPSARPR 199

Query: 805 PPVTQP---VSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLM 861
           PP   P   VS               + PS G  G       LQRP           PL 
Sbjct: 200 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAG--GG------LQRPASRSLSS-SATPLS 250

Query: 862 PPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGG------PGPG 915
            P    P    RG P  P   + P P G++   PP     R    P LG         P 
Sbjct: 251 SPARSGPSA--RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS 308

Query: 916 PGGPEDRD-----------GRQQPPQQPQQQPQPQAPQQPQQQQQQQ-------PPPSQQ 957
           P G + R                PP  P   P P AP  P      Q        PPSQ 
Sbjct: 309 PSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQA 368

Query: 958 PPPTQQQPQQ 967
           PP     P Q
Sbjct: 369 PPSMTTPPMQ 378



 Score = 43.9 bits (102), Expect = 9e-04
 Identities = 65/292 (22%), Positives = 86/292 (29%), Gaps = 49/292 (16%)

Query: 115 PLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAV 174
           P L +      + P++ + T    +PPP     + PP Q  P+   + P  PS+     V
Sbjct: 702 PPLQVPPSPPASPPMSPSATPPPQAPPP----LAAPPLQVPPSPPASPPMSPSATPPPRV 757

Query: 175 AQLFQTTQGQQLQQILQTFQQPPK--PQSPALDNAVMAQVQAITAQLKTTPTQPSE---- 228
             L            LQ    PP   P SP       A     T  L+  P+ P+     
Sbjct: 758 PPLLAAPP-------LQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQ 810

Query: 229 -----------QKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAA 277
                         A PPP+        LL        P A          + T  AP  
Sbjct: 811 APFSPSASLPMSPLATPPPQAPPVLAAPLLQ---VPPSPPA----------SPTLQAPRR 857

Query: 278 AVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQP-RMMGIQQD 336
              P P  +V       A +P PP  P   P   +  P    H +     P  + G    
Sbjct: 858 PPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSG 917

Query: 337 PMHHQVPLPPNG------QMPGFGLLPTPPFPPMAQPVIP-PTPPVQQPFQA 381
           P       PP            +   P PP      P  P P PP   P  A
Sbjct: 918 PEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSA 969



 Score = 36.6 bits (83), Expect = 0.14
 Identities = 67/297 (22%), Positives = 100/297 (33%), Gaps = 31/297 (10%)

Query: 120 AAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLP--------SSDAF 171
           +AGTS+  P +    +  G   PP K +S  P  +   +       P        S++  
Sbjct: 82  SAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEET 141

Query: 172 AAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQL-----KTTPTQP 226
            A  +  +  +   L    +     P P +P+   A  ++       L        P  P
Sbjct: 142 VARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPP 201

Query: 227 SE--QKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPT 284
           +E  +K+     E  T        R            S+   ++A   ++PA + P A  
Sbjct: 202 TEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSA-R 260

Query: 285 ATVPAAAAPAAASPPPPQA---PFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQ 341
            T  A A P+   P   QA   P   P      PA     +     P   G +  P    
Sbjct: 261 GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARP---- 316

Query: 342 VPLPPNGQMPGFGLLPT--PPFPPMAQ--PVIPPTPPVQQPFQASFQAQNEPLTQKP 394
           VP P N   P    LP   PP PP+A   P+ PP+P      Q        P +Q P
Sbjct: 317 VPPPDNAATP----LPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAP 369



 Score = 36.2 bits (82), Expect = 0.18
 Identities = 70/285 (24%), Positives = 83/285 (29%), Gaps = 42/285 (14%)

Query: 716 PMHLPPGFLPPGPPPPITPPVSIPPPHTPPISI-------PNSTIAGINEDTTKDLSIGN 768
           P    PG L P PP    PP  + P     +         P +  AG     T   S   
Sbjct: 17  PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76

Query: 769 PIPTVVSGARG-NAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPV--- 824
             PT  +G    N  S       G   PPA   N    PV+ P    GT    PGP+   
Sbjct: 77  AGPTRSAGTSSRNPASRPPASGRGERAPPA--KNTSPGPVSSPGRASGT--TRPGPLGQK 132

Query: 825 -------------IGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQR------FPLMPPRP 865
                           +AP    L A          PG P P + R        +  PRP
Sbjct: 133 GLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRP 192

Query: 866 MPPHMMHRGPPPGP-GGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDG 924
             P    R P  GP    +    H    P P      RP    GL  P            
Sbjct: 193 -APSARPRPPTEGPRKSVSSASEHSTTEPSP--AARRRPSAGGGLQRPASRSLSSSATPL 249

Query: 925 RQQPPQQPQQQPQPQAPQQPQQQQ----QQQPPPSQQPPPTQQQP 965
                  P  +  P+AP  P Q +    Q   PP   PP     P
Sbjct: 250 SSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP 294



 Score = 35.4 bits (80), Expect = 0.31
 Identities = 58/285 (20%), Positives = 93/285 (32%), Gaps = 69/285 (24%)

Query: 120 AAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQ 179
           +AG     P + +++++      P +  S P  + TP + PA P  P      A+     
Sbjct: 229 SAGGGLQRPASRSLSSSATPLSSPAR--SGPSARGTPRA-PAHPSQPKPKGLQAL----- 280

Query: 180 TTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQK 239
                          +PP+   P  D A    +  +++    TP+    +    PPP+  
Sbjct: 281 ---------------RPPQVTPPRKDAA--PALGPLSSSPLATPSPSGTKARPVPPPDNA 323

Query: 240 TAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPP 299
                           P  +  S    T       P    PP+P+A       P+  + P
Sbjct: 324 AT------------PLPATLPPSPPLAT-------PLPLAPPSPSAPPSLQTLPSPPATP 364

Query: 300 PPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTP 359
           P QAP       MQ P            P +  I    + H +  P          L  P
Sbjct: 365 PSQAPPSMTTPPMQAP------------PSLQTIPPIQVPHSLTSPS---------LQAP 403

Query: 360 PFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQP 404
           P  P+A   +  T  +  P   + QA +  LT  P Q +  +  P
Sbjct: 404 P-SPLALSSLQATTSLGSP---TLQATHSFLTMSPRQTQASLTSP 444


>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
          Length = 416

 Score =  110 bits (274), Expect = 1e-23
 Identities = 128/393 (32%), Positives = 146/393 (37%), Gaps = 84/393 (21%)

Query: 619 PKKPENEVAQNG----GAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPP-------PQV 667
           P KP+    Q G    G      +P  P P+    P  P P   P   PP       P+ 
Sbjct: 54  PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRS 113

Query: 668 PPHQP-GPPVVGALQPPAFTPPLGIP--PPGFGPGVP--PPPP-----PPPFLRPGFNPM 717
           PP +P GPP  G  QP    PP G P  PP  G   P  PPPP     PPP         
Sbjct: 114 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSS 173

Query: 718 HLPPGFLPPGPPP-----PITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPT 772
             PPG  P GPPP     P  PP   PPP  P    P     G N+        G P P 
Sbjct: 174 RSPPG-KPQGPPPQGGNQPQGPP---PPPGKPQGPPPQ----GGNKPQ------GPPPP- 218

Query: 773 VVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPST 832
                +G    GD+ K   +  PP  P   P     QP      QG  P P      P  
Sbjct: 219 --GKPQGPPPQGDN-KSQSARSPPGKPQGPPPQGGNQP------QGPPPPPGKPQGPPPQ 269

Query: 833 GLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKG 892
           G            +P G PPP   + P  PP+        R PP  P G   PPP G   
Sbjct: 270 GG----------NKPQGPPPPGKPQGP--PPQGGSKSRSSRSPPGKPQG---PPPQGGNQ 314

Query: 893 PFPPHGPFVRPGGMPGLGG------PGPG-PGGPEDRDG-----RQQPPQQPQQQPQ--- 937
           P  P  P  +P G P  GG      P PG P GP  + G      + PP +PQ  PQ   
Sbjct: 315 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEG 374

Query: 938 --PQAPQQPQ--QQQQQQPPPSQQPPPTQQQPQ 966
             PQ P  P     QQ Q PP+ QP    + PQ
Sbjct: 375 NNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQ 407



 Score =  103 bits (257), Expect = 9e-22
 Identities = 125/367 (34%), Positives = 138/367 (37%), Gaps = 62/367 (16%)

Query: 627 AQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFT 686
           AQN   + S  E  S I    P   PP     P    PP  P    GPP  G  QP    
Sbjct: 16  AQNLNEDVSQEESPSLIAGN-PQGAPPQGGNKP--QGPPSPPGKPQGPPPQGGNQPQGPP 72

Query: 687 PPLGIP--PPGFGPGVP--PPPP-----PPPFLRPGFNPMHLPPGFLPPGPPP-----PI 732
           PP G P  PP  G   P  PPPP     PPP      +P   PPG  P GPPP     P 
Sbjct: 73  PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRS-PPG-KPQGPPPQGGNQPQ 130

Query: 733 TPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGS 792
            PP   PPP  P    P     G N+        G P P      +G    GD+ K   S
Sbjct: 131 GPP---PPPGKPQGPPPQ----GGNKPQ------GPPPP---GKPQGPPPQGDN-KSRSS 173

Query: 793 AVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARP-GLIPLQRPPGMP 851
             PP  P   P     QP      QG  P P      P  G  G +P G  P  +P G P
Sbjct: 174 RSPPGKPQGPPPQGGNQP------QGPPPPPGKPQGPPPQG--GNKPQGPPPPGKPQGPP 225

Query: 852 PP-----HLQRFPLMPPRPMPPH--MMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPG 904
           P         R P   P+  PP      +GPPP PG    PPP G   P  P  P  +P 
Sbjct: 226 PQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP-GKPQ 284

Query: 905 GMPGLGG--------PGPGPGGPEDRDGRQ-QPPQQPQQQPQPQAPQQPQQQQQQQPPPS 955
           G P  GG        P   P GP  + G Q Q P  P  +PQ   PQ   + Q   PP  
Sbjct: 285 GPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK 344

Query: 956 QQPPPTQ 962
            Q PP Q
Sbjct: 345 PQGPPPQ 351



 Score = 98.6 bits (244), Expect = 3e-20
 Identities = 116/381 (30%), Positives = 139/381 (36%), Gaps = 58/381 (15%)

Query: 618 IPKKPENEVAQNG----GAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPG 673
           I   P+    Q G    G  +   +P  P P+    P  P P P     PPPQ      G
Sbjct: 32  IAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 91

Query: 674 PPVVGALQPPAFTPPLGIPP--PGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPP 731
           PP  G  Q P   PP G     P   PG P  PPP    +P   P   PP   P GPPP 
Sbjct: 92  PPPPGKPQGP---PPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPP---PPPGKPQGPPPQ 145

Query: 732 ITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYG 791
                  PPP   P   P     G N+  +     G P        +G    G + +  G
Sbjct: 146 GGNKPQGPPPPGKPQGPPPQ---GDNKSRSSRSPPGKP--------QGPPPQGGN-QPQG 193

Query: 792 SAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMP 851
              PP  P   P     +P      QG  P P      P  G   ++    P  +P G P
Sbjct: 194 PPPPPGKPQGPPPQGGNKP------QGPPP-PGKPQGPPPQGDNKSQSARSPPGKPQG-P 245

Query: 852 PPHLQRFPLMPPRPM------PPHMMHR--GPPPGPGGFAMPPPHG-------MKGPFPP 896
           PP     P  PP P       PP   ++  GPPP PG    PPP G          P  P
Sbjct: 246 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP-PGKPQGPPPQGGSKSRSSRSPPGKP 304

Query: 897 HGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQ---QPQQQPQPQAPQQPQQQQQQQPP 953
            GP  + G  P   GP P PG P+       PPQ   +PQ  P P  PQ P  Q   +  
Sbjct: 305 QGPPPQGGNQP--QGPPPPPGKPQG-----PPPQGGNKPQGPPPPGKPQGPPPQGGSKSR 357

Query: 954 PSQQPPPTQQQPQQFRNDNRQ 974
            ++ PP   Q P Q   +N Q
Sbjct: 358 SARSPPGKPQGPPQQEGNNPQ 378



 Score = 75.1 bits (183), Expect = 4e-13
 Identities = 76/240 (31%), Positives = 96/240 (40%), Gaps = 35/240 (14%)

Query: 751 STIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQP 810
           S+   +NED +++ S     P++++G    A      K  G   PP  P   P     QP
Sbjct: 14  SSAQNLNEDVSQEES-----PSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQP 68

Query: 811 VSLLGTQGVAPGPVIGLQAPSTGLLGARP-GLIPLQRPPGMPPP-HLQRFPLMPP-RPMP 867
                 QG  P P      P  G  G +P G  P  +P G PP     R P  PP +P  
Sbjct: 69  ------QGPPPPPGKPQGPPPQG--GNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQG 120

Query: 868 PHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGP-GPGPGGPEDRDGRQ 926
           P       P GP     PPP   +GP P  G   +P G P  G P GP P G       +
Sbjct: 121 PPPQGGNQPQGPP----PPPGKPQGPPPQGGN--KPQGPPPPGKPQGPPPQGDNKSRSSR 174

Query: 927 QPPQQPQQQPQPQAPQQPQ-----QQQQQQPP------PSQQPPPTQQQPQQFRNDNRQQ 975
            PP +PQ  P PQ   QPQ       + Q PP      P   PPP + Q    + DN+ Q
Sbjct: 175 SPPGKPQGPP-PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQ 233



 Score = 48.5 bits (114), Expect = 4e-05
 Identities = 61/263 (23%), Positives = 73/263 (27%), Gaps = 55/263 (20%)

Query: 128 PVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQ 187
           P  +     +G PPPP K    PP        P  P  P               QG    
Sbjct: 183 PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP----------PQGDNKS 232

Query: 188 QILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLL 247
           Q  ++   P KPQ P        Q           P      K   PPP  K        
Sbjct: 233 QSARS--PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQ------ 284

Query: 248 DRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGF 307
                   P+   +S+            + + P  P    P         PPPP  P G 
Sbjct: 285 -----GPPPQGGSKSRS-----------SRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 328

Query: 308 PGDGMQQPAYTQHQNMDQFQPRMMGI----------------QQDPMHHQVPLPPNGQMP 351
           P  G  +P         Q  P   G                 QQ+  + Q P PP G  P
Sbjct: 329 PPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNP 388

Query: 352 GFGLLPTPPFPPMAQPVIPPTPP 374
                  P  PP  QP  PP PP
Sbjct: 389 -----QQPQAPPAGQPQGPPRPP 406



 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 57/251 (22%), Positives = 70/251 (27%), Gaps = 35/251 (13%)

Query: 128 PVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQ 187
           P  +     +G PPPP K    PP        P  P  P               QG    
Sbjct: 121 PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP----------PQGDNKS 170

Query: 188 QILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLL 247
           +  ++   P KPQ P        Q           P      K   PPP  K        
Sbjct: 171 RSSRS--PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP------- 221

Query: 248 DRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGF 307
                   P    ++K +          A + P  P    P         PPPP  P G 
Sbjct: 222 ------QGPPPQGDNKSQS---------ARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 266

Query: 308 PGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQP 367
           P  G  +P         Q  P   G  +       P  P G  P  G  P  P PP  +P
Sbjct: 267 PPQGGNKPQGPPPPGKPQGPPPQGG-SKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKP 325

Query: 368 VIPPTPPVQQP 378
             PP     +P
Sbjct: 326 QGPPPQGGNKP 336



 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 61/263 (23%), Positives = 78/263 (29%), Gaps = 22/263 (8%)

Query: 119 MAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQAT-PNSVPAVPQLPSSDAFAAVAQL 177
           + AG    AP  +     +G P PP K    PP     P   P  P  P         Q 
Sbjct: 31  LIAGNPQGAP-PQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP----PQG 85

Query: 178 FQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPE 237
               QG            P KPQ P          ++   + +  P Q   Q    PPP 
Sbjct: 86  GNKPQGP---------PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPP 136

Query: 238 QKTAFDKKLLDRFDYDDEPEAVEES--KKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAA 295
            K                P    +    + D  + ++ +P    P  P    P       
Sbjct: 137 GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSP----PGKPQGPPPQGGNQPQ 192

Query: 296 ASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGL 355
             PPPP  P G P  G  +P         Q  P   G  +       P  P G  P  G 
Sbjct: 193 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQ-GPPPQGDNKSQSARSPPGKPQGPPPQGGN 251

Query: 356 LPTPPFPPMAQPVIPPTPPVQQP 378
            P  P PP  +P  PP     +P
Sbjct: 252 QPQGPPPPPGKPQGPPPQGGNKP 274



 Score = 38.5 bits (88), Expect = 0.036
 Identities = 39/159 (24%), Positives = 49/159 (30%), Gaps = 22/159 (13%)

Query: 280 PPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMH 339
           P  P    P         PPPP  P G P  G  +P         Q  P      + P  
Sbjct: 54  PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSP-- 111

Query: 340 HQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEM 399
              P  P G  P  G  P  P PP  +P  PP        Q   + Q  P   KP     
Sbjct: 112 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP-------QGGNKPQGPPPPGKPQGPPP 164

Query: 400 EVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSR 438
           +              DN+   SRS    P+    + G++
Sbjct: 165 Q-------------GDNKSRSSRSPPGKPQGPPPQGGNQ 190


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score =  104 bits (259), Expect = 5e-22
 Identities = 96/292 (32%), Positives = 111/292 (38%), Gaps = 59/292 (20%)

Query: 674 PPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPIT 733
           PP +G  Q      P+G  P   GP  P PPPPP          H      PP  PPP  
Sbjct: 35  PPGMGLNQNRG---PMGPGPGQSGPKPPIPPPPP----------HQQQQQPPPQQPPPQQ 81

Query: 734 PPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSA 793
           PP   PPPH  P            +D++K        P V  G  G A    S     S+
Sbjct: 82  PPPHQPPPHPQPHQ--QQQPPPPPQDSSK--------PVVAQGP-GPAPGVGSAPPASSS 130

Query: 794 VPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPP 853
            PPA P     PP           G  PGP      P   +  A PG  P       P P
Sbjct: 131 APPATPPTSGAPP-----------GSGPGPT---PTPPPAVTSAPPGAPP-------PTP 169

Query: 854 HLQRFPLMPPR----PMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGL 909
                P  PP+    P PP  +   P PGPG    P P G KG   P GP  +PGG PGL
Sbjct: 170 PSSGVPTTPPQAGGPPPPPAAV---PGPGPGPKQGPGPGGPKGGKMPGGP--KPGGGPGL 224

Query: 910 GGPG-----PGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQ 956
             PG     P  GG E R GRQ  P   QQ  Q   P  P  + +++   S+
Sbjct: 225 STPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSE 276



 Score = 77.4 bits (189), Expect = 7e-14
 Identities = 83/253 (32%), Positives = 94/253 (37%), Gaps = 57/253 (22%)

Query: 644 PKPLPVPVPPI----PVPAPITVPPPQVPPHQPGP-PVVGALQPPAFTP-----PLGIPP 693
           PKP P+P PP       P P   PP Q PPHQP P P     Q P   P     P+    
Sbjct: 56  PKP-PIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQG 114

Query: 694 PGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTI 753
           PG  PGV   PP      P   P    P    PGP P   P V+  PP  PP + P+S +
Sbjct: 115 PGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGV 174

Query: 754 AGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSL 813
                 TT   + G P P                       P A P   P P        
Sbjct: 175 -----PTTPPQAGGPPPP-----------------------PAAVPGPGPGP-------- 198

Query: 814 LGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMP-PPHL-QRFPLMPPRPMPPH-- 869
              QG  PG   G + P     G  PG   L  P G P PPH     P    +  PP+  
Sbjct: 199 --KQGPGPGGPKGGKMPGGPKPGGGPG---LSTPGGHPKPPHRGGGEPRGGRQHHPPYHQ 253

Query: 870 MMHRGPPP-GPGG 881
             H+GPPP GPGG
Sbjct: 254 QHHQGPPPGGPGG 266



 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 38/118 (32%), Positives = 46/118 (38%), Gaps = 6/118 (5%)

Query: 843 PLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVR 902
           P  +PP  P PH Q+ P  PP+     ++ +GP P PG  + PP      P  P      
Sbjct: 83  PPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATP-----P 137

Query: 903 PGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPP 960
             G P   GPGP P  P        P   P   P    P  P Q     PPP+  P P
Sbjct: 138 TSGAPPGSGPGPTP-TPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGP 194



 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 44/99 (44%), Positives = 46/99 (46%), Gaps = 14/99 (14%)

Query: 873 RGPPPGPGG---FAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPP 929
           RG   G GG   F  PPP GM G     GP    G  PG  GP P    P     +QQPP
Sbjct: 19  RGGGGGRGGLHDFRSPPP-GM-GLNQNRGPM---GPGPGQSGPKPPIPPPPPHQQQQQPP 73

Query: 930 QQ---PQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQP 965
            Q   PQQ P  Q P  PQ  QQQQPPP   PP    +P
Sbjct: 74  PQQPPPQQPPPHQPPPHPQPHQQQQPPP---PPQDSSKP 109



 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 44/112 (39%), Positives = 47/112 (41%), Gaps = 16/112 (14%)

Query: 637 TEPVSPIPK---PLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPP 693
           T P S  P    P P P PP   PA +T  PP  PP  P PP  G    P   P  G PP
Sbjct: 135 TPPTSGAPPGSGPGPTPTPP---PA-VTSAPPGAPP--PTPPSSGV---PTTPPQAGGPP 185

Query: 694 PGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPP 745
           P   P   P P P P   PG  P     G +P GP P   P +S P  H  P
Sbjct: 186 P--PPAAVPGPGPGPKQGPG--PGGPKGGKMPGGPKPGGGPGLSTPGGHPKP 233



 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 35/87 (40%), Positives = 40/87 (45%), Gaps = 12/87 (13%)

Query: 898 GPFVRPGGMPGLGG------PGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQ 951
           G F R GG  G GG      P PG G  ++R      P   Q  P+P  P  P  QQQQQ
Sbjct: 14  GGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRG--PMGPGPGQSGPKPPIPPPPPHQQQQQ 71

Query: 952 PPPS----QQPPPTQQQPQQFRNDNRQ 974
           PPP     QQPPP Q  P    +  +Q
Sbjct: 72  PPPQQPPPQQPPPHQPPPHPQPHQQQQ 98



 Score = 50.4 bits (119), Expect = 9e-06
 Identities = 62/258 (24%), Positives = 79/258 (30%), Gaps = 62/258 (24%)

Query: 140 PPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKP 199
           PPPP +   +PP Q  P   P   Q P                     Q  Q  Q PP P
Sbjct: 62  PPPPHQQQQQPPPQQPPPQQPPPHQPPPHP------------------QPHQQQQPPPPP 103

Query: 200 QSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAV 259
           Q  +    V+AQ       + + P   S    A PP                    P   
Sbjct: 104 QDSS--KPVVAQGPGPAPGVGSAPPASSSAPPATPPTS----------------GAPPGS 145

Query: 260 EESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQ 319
                       T+AP  A PP P ++      P A  PPPP A    PG G +Q     
Sbjct: 146 GPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQ----- 200

Query: 320 HQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPF 379
                   P   G +   M       P G  PG G       P ++ P   P PP +   
Sbjct: 201 -------GPGPGGPKGGKM-------PGGPKPGGG-------PGLSTPGGHPKPPHRGGG 239

Query: 380 QASFQAQNEPLTQKPHQQ 397
           +     Q+ P   + H Q
Sbjct: 240 EPRGGRQHHPPYHQQHHQ 257



 Score = 43.1 bits (100), Expect = 0.001
 Identities = 40/142 (28%), Positives = 44/142 (30%), Gaps = 44/142 (30%)

Query: 836 GARPGLIPLQRPPG----------MPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMP 885
           G R GL   + PP           M P   Q  P  P  P PPH   + PPP       P
Sbjct: 23  GGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQP 82

Query: 886 PPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQ 945
           PPH      PPH                             QP QQ Q  P PQ   +P 
Sbjct: 83  PPHQP----PPH----------------------------PQPHQQQQPPPPPQDSSKPV 110

Query: 946 QQQQQQPPP--SQQPPPTQQQP 965
             Q   P P     PP +   P
Sbjct: 111 VAQGPGPAPGVGSAPPASSSAP 132



 Score = 43.1 bits (100), Expect = 0.001
 Identities = 47/141 (33%), Positives = 50/141 (35%), Gaps = 20/141 (14%)

Query: 622 PENEVAQNGGAETSHTEPVS-PIPKPLPVPV-----PPIPVPAPITVPPPQVPPHQPGPP 675
           P +  A      TS   P S P P P P P      P  P P P +   P  PP   GPP
Sbjct: 126 PASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPP 185

Query: 676 VVGALQP-----PAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPP---GFLPPG 727
              A  P     P   P  G P  G  PG P P   P    PG +P   PP   G  P G
Sbjct: 186 PPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPK--PPHRGGGEPRG 243

Query: 728 ----PPPPITPPVSIPPPHTP 744
                PP        PPP  P
Sbjct: 244 GRQHHPPYHQQHHQGPPPGGP 264



 Score = 33.1 bits (74), Expect = 1.5
 Identities = 30/112 (26%), Positives = 34/112 (30%), Gaps = 24/112 (21%)

Query: 273 TAPAAAVPPAPT---ATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPR 329
           + P   +PP P       P    P    PPP Q P          P    HQ      P 
Sbjct: 54  SGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPP----------PHPQPHQQQQPPPP- 102

Query: 330 MMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPT---PPVQQP 378
                  P     P+   G  P  G+   PP    A P  PPT   PP   P
Sbjct: 103 -------PQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGP 147



 Score = 32.0 bits (71), Expect = 3.4
 Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 8/77 (10%)

Query: 328 PRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQN 387
           P  MG+ Q+    + P+ P     G    P PP PP         PP QQP         
Sbjct: 35  PPGMGLNQN----RGPMGPGPGQSG----PKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQ 86

Query: 388 EPLTQKPHQQEMEVEQP 404
            P   +PHQQ+     P
Sbjct: 87  PPPHPQPHQQQQPPPPP 103



 Score = 31.6 bits (70), Expect = 4.5
 Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 14/75 (18%)

Query: 340 HQVPLPPNGQMPGFGLL----PTPPFPPMA--QPVIPPTPPVQQ----PFQASFQAQNEP 389
           H    PP    PG GL     P  P P  +  +P IPP PP QQ    P Q     Q  P
Sbjct: 29  HDFRSPP----PGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPP 84

Query: 390 LTQKPHQQEMEVEQP 404
               PH Q  + +QP
Sbjct: 85  HQPPPHPQPHQQQQP 99



 Score = 31.2 bits (69), Expect = 5.8
 Identities = 36/161 (22%), Positives = 62/161 (38%), Gaps = 28/161 (17%)

Query: 936  PQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVE 995
            P+  A + P  Q++++ PP      T      F  +  Q++ S  + E+  R      ++
Sbjct: 460  PEKLAQKNPMYQKERETPPRFAQHGT------FEYEYSQRWKSLDEMEKQQREQVEKNMK 513

Query: 996  NDRERYGNRNDD---RDNSNRDRREWGRRSPDRDRHRDL----------------EERNR 1036
            + +++  +  +D      +N  R++  RR  +  R  +L                EER R
Sbjct: 514  DAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRRMEELHNQEMQKRKEMQLRQEEERRR 573

Query: 1037 RSSGH--RDRERDSRDRESRREKEEARGKEKPEVTD-RAGG 1074
            R      R RE + + R  R E     G   P   D R GG
Sbjct: 574  REEEMMIRQREMEEQMRRQREESYSRMGYMDPRERDMRMGG 614


>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
            sapiens]
          Length = 1362

 Score =  101 bits (252), Expect = 4e-21
 Identities = 150/668 (22%), Positives = 236/668 (35%), Gaps = 147/668 (22%)

Query: 357  PTPPFPPMAQPVIPP-----TPPVQQPFQASFQAQNEPLTQKPHQQ------EMEVEQPC 405
            P  P   ++ P +PP      PP      +   + ++  T    ++      E++ +   
Sbjct: 461  PEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKA 520

Query: 406  IQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRR-SRHRRSRSRSRDRRRHSPRSRSQ 464
            + E    +S  ++++ +   +  K ++     R      +++S+++    ++    + S 
Sbjct: 521  VHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSN 580

Query: 465  ERRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINM 524
                +++    + K  P  + E    C    +    +KR    D             IN 
Sbjct: 581  SNVSKKEPAPMKSKPPPTYESEEEDKCKPMSYE---EKRQLSLD-------------INK 624

Query: 525  IPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIK----------IAWALNKGIKADY 574
            +P      +V +  Q    +L+  +    +++ +++K          +   L K  K   
Sbjct: 625  LPGEKLGRVVHII-QSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQA 683

Query: 575  KQYWDVELGVTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAET 634
            ++  DV  G + +        E ES  E    DS+    +     KK  +   +      
Sbjct: 684  EKV-DVIAGSSKMKG--FSSSESESSSESSSSDSEDSETEMAPKSKKKGHPGREQKKHHH 740

Query: 635  SHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPP 694
             H + +   P P+P   PP          PPQ PP  P PP     QPP   PP  +P  
Sbjct: 741  HHHQQMQQAPAPVPQQPPP----------PPQQPP--PPPPPQQQQQPPPPPPPPSMPQQ 788

Query: 695  GFGPGVPPPPPP-----PPFLRPG-----FNP--------MHLPPGFLPPGPPPPITPPV 736
               P +   PPP      P L P      F+P        +HLP   LPP  P P   P 
Sbjct: 789  A-APAMKSSPPPFIATQVPVLEPQLPGSVFDPIGHFTQPILHLPQPELPPHLPQP---PE 844

Query: 737  SIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPP 796
               PPH    ++ +              ++ N +P   S     A +         AV P
Sbjct: 845  HSTPPHLNQHAVVSPP------------ALHNALPQQPSRPSNRAAALPPKPARPPAVSP 892

Query: 797  AAPTN--LPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPH 854
            A      LP PP+ QP  +L      P P      P T +       + LQ+        
Sbjct: 893  ALTQTPLLPQPPMAQPPQVLLEDEEPPAP------PLTSMQMQ----LYLQQ-------- 934

Query: 855  LQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGP 914
            LQ+  + PP P+ P +  +  PP P    +PPP        PH     P     L    P
Sbjct: 935  LQK--VQPPTPLLPSVKVQSQPPPP----LPPP--------PH-----PSVQQQLQQQPP 975

Query: 915  GPGGPEDRDGRQQPPQQPQQQPQP--------------QAPQQPQQQQQQQPPPSQQPPP 960
             P  P+      QPP Q Q QP P              Q P  PQ QQ   PPP QQPPP
Sbjct: 976  PPPPPQP-----QPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPPP 1030

Query: 961  TQ-QQPQQ 967
             Q  +PQQ
Sbjct: 1031 PQPAKPQQ 1038



 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 93/422 (22%), Positives = 149/422 (35%), Gaps = 82/422 (19%)

Query: 646  PLPVPVPPIP-VPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPP 704
            P P+P PP P V   +   PP  PP QP PP     QPP    P+ + P  F   +  PP
Sbjct: 955  PPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPP--RPVHLQPMQFSTHIQQPP 1012

Query: 705  PPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDL 764
            PP      G  P H PPG  PP PP P  P   I   H+P     +    G   +    L
Sbjct: 1013 PPQ-----GQQPPHPPPGQQPP-PPQPAKPQQVIQHHHSPRHHKSDPYSTGHLREAPSPL 1066

Query: 765  SIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPV 824
             I +P                 +  + S    + P     P   +   L     V P P+
Sbjct: 1067 MIHSP----------------QMSQFQSLTHQSPPQQNVQPKKQE---LRAASVVQPQPL 1107

Query: 825  IGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPP-RPMPPHMMHRGPPPGPGGFA 883
            + ++                     +  P ++  P  P  RP PP    + P        
Sbjct: 1108 VVVKEEK------------------IHSPIIRSEPFSPSLRPEPP----KHPESIKAPVH 1145

Query: 884  MPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQ 943
            +P    MK P     P +RP   P    P PG             P + +Q+ +P+ P  
Sbjct: 1146 LPQRPEMK-PVDVGRPVIRP---PEQNAPPPGA------------PDKDKQKQEPKTPVA 1189

Query: 944  PQQQQQQQPPPS-----QQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDR 998
            P++  + +   S     Q+ P T     +  +D+ +QF          RR+   + E ++
Sbjct: 1190 PKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQF----------RRAAREKEEREK 1239

Query: 999  ERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKE 1058
                          R R+E  R   D D        +  +   +++++  R  + +++++
Sbjct: 1240 ALKAQAEHAEKEKERLRQERMRSREDEDALEQARRAHEEARRRQEQQQQQRQEQQQQQQQ 1299

Query: 1059 EA 1060
            +A
Sbjct: 1300 QA 1301



 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 71/282 (25%), Positives = 98/282 (34%), Gaps = 54/282 (19%)

Query: 140  PPPPVKVSSEPPTQATPNSVP---------------------AVPQLPSSDAFAAVAQLF 178
            PPPP +   +PP    P S+P                       PQLP S  F  +    
Sbjct: 766  PPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLPGS-VFDPIGHFT 824

Query: 179  QTTQGQQLQQILQTFQQPPKPQSPA-LDNAVMAQVQAITAQLKTTPTQPSEQKAAFPP-P 236
            Q        ++     QPP+  +P  L+   +    A+   L   P++PS + AA PP P
Sbjct: 825  QPILHLPQPELPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKP 884

Query: 237  EQKTAF-----DKKLLDRFDYDDEPEAVEESKKEDTTAVTT------TAPAAAVPPAPTA 285
             +  A         LL +      P+ + E ++     +T+            V P PT 
Sbjct: 885  ARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQP-PTP 943

Query: 286  TVPAAAAPAAASPPPPQAPFGFPGDGMQQ------PAYTQHQNMDQFQPRMMGIQQDPM- 338
             +P+    +   PP P  P       +QQ      P   Q     Q QP    +   PM 
Sbjct: 944  LLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQ 1003

Query: 339  ---HHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQ 377
               H Q P PP GQ         PP PP  Q   PP P   Q
Sbjct: 1004 FSTHIQQPPPPQGQQ--------PPHPPPGQQPPPPQPAKPQ 1037



 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 43/158 (27%), Positives = 54/158 (34%), Gaps = 41/158 (25%)

Query: 604 GMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPI-TV 662
           G  ++ T  P    +P   +            +  PV   P P P   P + V  P+ TV
Sbjct: 182 GRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTV 241

Query: 663 PPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPG 722
            PPQ                     PL  PPP     VPP P PPP   P   P+   P 
Sbjct: 242 VPPQ---------------------PLQTPPP-----VPPQPQPPP--APAPQPVQSHPP 273

Query: 723 FLPPGPPP-----------PITPPVSIPPPHTPPISIP 749
            +   P P             T P +I P H PP S+P
Sbjct: 274 IIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPP-SLP 310



 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 93/452 (20%), Positives = 152/452 (33%), Gaps = 123/452 (27%)

Query: 129  VAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQ 188
            V+  +T     P PP+   ++PP     +  P  P L S      + QL +      L  
Sbjct: 890  VSPALTQTPLLPQPPM---AQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLP 946

Query: 189  ILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLD 248
             ++   QPP P  P    +V  Q+Q    Q    P  P  Q    PPP+Q+         
Sbjct: 947  SVKVQSQPPPPLPPPPHPSVQQQLQ----QQPPPPPPPQPQ----PPPQQQ--------- 989

Query: 249  RFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFP 308
               +   P  V     + +T +         PP P    P    P    PPP  A    P
Sbjct: 990  ---HQPPPRPVHLQPMQFSTHIQQ-------PPPPQGQQPPHPPPGQQPPPPQPAK---P 1036

Query: 309  GDGMQQPAYTQHQNMDQF---------------QPRMMGIQQDPMHHQVPLPPNGQMPGF 353
               +Q     +H   D +                P+M   Q   + HQ P   N Q    
Sbjct: 1037 QQVIQHHHSPRHHKSDPYSTGHLREAPSPLMIHSPQMSQFQS--LTHQSPPQQNVQPKKQ 1094

Query: 354  GL-----------------------LPTPPFPPMAQPVIPPTP-----PVQQPFQASFQA 385
             L                       + + PF P  +P  P  P     PV  P +   + 
Sbjct: 1095 ELRAASVVQPQPLVVVKEEKIHSPIIRSEPFSPSLRPEPPKHPESIKAPVHLPQRPEMKP 1154

Query: 386  QN--EPLTQKPHQ------------QEMEVEQPCIQE--------------VKRH----- 412
             +   P+ + P Q            Q+ E + P   +              V++H     
Sbjct: 1155 VDVGRPVIRPPEQNAPPPGAPDKDKQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPS 1214

Query: 413  -----MSDNRKSRSRSASRSPKRRRSRSG----SRSRRSRHRRSRSRSR---DRRRHSPR 460
                  SD+ +   R+A    +R ++       +   + R R+ R RSR   D    + R
Sbjct: 1215 STAKSSSDSFEQFRRAAREKEEREKALKAQAEHAEKEKERLRQERMRSREDEDALEQARR 1274

Query: 461  SRSQERRDREKERERRQKGLPQVKPETASVCS 492
            +  + RR +E+++++RQ+   Q + + A+V +
Sbjct: 1275 AHEEARRRQEQQQQQRQEQQQQQQQQAAAVAA 1306



 Score = 48.5 bits (114), Expect = 4e-05
 Identities = 64/218 (29%), Positives = 83/218 (38%), Gaps = 44/218 (20%)

Query: 756 INEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLG 815
           INE  T++  I   I       RG  E+G + K   S VP    T   TPP TQ      
Sbjct: 161 INELPTEETEI--MIVQAKGRGRGRKETG-TAKPGVSTVPNT--TQASTPPQTQ------ 209

Query: 816 TQGVAPGPVIGLQAPSTGLLGARPGLIPLQRP--PGMPPPHLQRFPLMPPRPMPPHMMHR 873
           T    P PV   QA         P LI +Q P    +PP  LQ  P +PP+P PP     
Sbjct: 210 TPQPNPPPV---QATPHPFPAVTPDLI-VQTPVMTVVPPQPLQTPPPVPPQPQPP----- 260

Query: 874 GPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPG----PGPGGPEDRDGRQQPP 929
            P P P             P   H P +     P     G         P   D   +PP
Sbjct: 261 -PAPAP------------QPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPP 307

Query: 930 QQPQQQPQPQAPQQPQQQQQQQP--PPSQQPPPTQQQP 965
             P   P+P+  +  Q+++  +P  PP +  P +QQ P
Sbjct: 308 SLP---PEPKTTKLGQRRESSRPVKPPKKDVPDSQQHP 342



 Score = 43.5 bits (101), Expect = 0.001
 Identities = 46/143 (32%), Positives = 52/143 (36%), Gaps = 30/143 (20%)

Query: 630 GGAETSHTEP-VSPIPKPLPVPVPP---IPVPAPITVPPPQVPPHQPGPPVVGALQPPAF 685
           G  ET   +P VS +P       PP    P P P   PP Q  PH P P V   L     
Sbjct: 182 GRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNP---PPVQATPH-PFPAVTPDLIVQ-- 235

Query: 686 TPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPP 745
           TP + + PP   P   PPP PP                 P  PP P   PV   PP    
Sbjct: 236 TPVMTVVPPQ--PLQTPPPVPPQ----------------PQPPPAPAPQPVQSHPPIIAA 277

Query: 746 ISIPNSTIAGINE--DTTKDLSI 766
              P  T  G+    DTT   +I
Sbjct: 278 TPQPVKTKKGVKRKADTTTPTTI 300



 Score = 40.8 bits (94), Expect = 0.007
 Identities = 37/142 (26%), Positives = 50/142 (35%), Gaps = 18/142 (12%)

Query: 280 PPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMH 339
           PP P  ++P  AAPA  S PPP      P    Q P  +    +  F   ++ + Q  + 
Sbjct: 778 PPPPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLPG-SVFDPIGHFTQPILHLPQPELP 836

Query: 340 HQVPLPPNGQMPG-------------FGLLPTPPFPP----MAQPVIPPTPPVQQPFQAS 382
             +P PP    P                 LP  P  P     A P  P  PP   P    
Sbjct: 837 PHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQ 896

Query: 383 FQAQNEPLTQKPHQQEMEVEQP 404
                +P   +P Q  +E E+P
Sbjct: 897 TPLLPQPPMAQPPQVLLEDEEP 918



 Score = 40.4 bits (93), Expect = 0.010
 Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 15/76 (19%)

Query: 640 VSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPA-----------FTPP 688
           V P P   P PVPP P P P   P PQ  P Q  PP++ A   P             T P
Sbjct: 242 VPPQPLQTPPPVPPQPQPPP--APAPQ--PVQSHPPIIAATPQPVKTKKGVKRKADTTTP 297

Query: 689 LGIPPPGFGPGVPPPP 704
             I P    P +PP P
Sbjct: 298 TTIDPIHEPPSLPPEP 313



 Score = 36.6 bits (83), Expect = 0.14
 Identities = 20/74 (27%), Positives = 34/74 (45%)

Query: 922  RDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRD 981
            R   ++  ++ +QQ Q +  QQ QQQQQ     +   P  Q    Q   D +++    R+
Sbjct: 1273 RRAHEEARRRQEQQQQQRQEQQQQQQQQAAAVAAAATPQAQSSQPQSMLDQQRELARKRE 1332

Query: 982  QERFGRRSFGNRVE 995
            QER  R +    ++
Sbjct: 1333 QERRRREAMAATID 1346



 Score = 35.8 bits (81), Expect = 0.24
 Identities = 93/481 (19%), Positives = 148/481 (30%), Gaps = 113/481 (23%)

Query: 76  NITATFQYLYLCPSEDKSKIVRVLN--LWQKNGVFKIEIIQPLLDMAAG-------TSNA 126
           N   T  Y+Y  P +D   +   L     QK      E  + ++  A G       T  A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGTA 189

Query: 127 APVAENVTNNEGSPPPPVKVSSEP---PTQATPNSVPAV-PQLPSSDAFAAVAQLFQTTQ 182
            P    V N   +  PP   + +P   P QATP+  PAV P L        V        
Sbjct: 190 KPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVP------ 243

Query: 183 GQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAF 242
                Q LQT   PP P  P    A   Q           P Q      A  P   KT  
Sbjct: 244 ----PQPLQT--PPPVPPQPQPPPAPAPQ-----------PVQSHPPIIAATPQPVKTKK 286

Query: 243 DKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQ 302
             K                 +K DTT  TT  P    P  P             S  P +
Sbjct: 287 GVK-----------------RKADTTTPTTIDPIHEPPSLPPEPKTTKLGQRRESSRPVK 329

Query: 303 APFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQD-----------PMHHQVPLPPNGQMP 351
            P     D  Q PA  +   + +      GI ++           P +  V +   G   
Sbjct: 330 PPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHD 389

Query: 352 GFGLLPTP---------------------------------PFPPMAQPVIPPTPPVQQP 378
              ++  P                                  + P    V+     +Q  
Sbjct: 390 YCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDV 449

Query: 379 FQASFQAQNEPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSR 438
           F+  F      +  +P +  + V  P +    + ++    S S S S S     +     
Sbjct: 450 FEMRF----AKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEE 505

Query: 439 SRRSR-----------HRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQVKPET 487
            R  R           H +  + S+  +++ P+ + +++++++KE+ +R++ + + K   
Sbjct: 506 ERAQRLAELQEQLKAVHEQLAALSQP-QQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSK 564

Query: 488 A 488
           A
Sbjct: 565 A 565



 Score = 35.0 bits (79), Expect = 0.40
 Identities = 38/132 (28%), Positives = 48/132 (36%), Gaps = 23/132 (17%)

Query: 274 APAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQF------- 326
           AP    PP P    P    P     PPP  P   P    QQ A     +   F       
Sbjct: 751 APVPQQPPPPPQQPPPPPPPQQQQQPPPPPP---PPSMPQQAAPAMKSSPPPFIATQVPV 807

Query: 327 -QPRMMGIQQDPM-HHQVPLPPNGQMPGFGLLPTPPFPP-MAQPVIPPTPP-VQQPFQAS 382
            +P++ G   DP+ H   P+           LP P  PP + QP    TPP + Q    S
Sbjct: 808 LEPQLPGSVFDPIGHFTQPILH---------LPQPELPPHLPQPPEHSTPPHLNQHAVVS 858

Query: 383 FQAQNEPLTQKP 394
             A +  L Q+P
Sbjct: 859 PPALHNALPQQP 870



 Score = 34.3 bits (77), Expect = 0.69
 Identities = 27/91 (29%), Positives = 34/91 (37%), Gaps = 17/91 (18%)

Query: 300 PPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTP 359
           P     G PG   ++  +  HQ M Q           P+  Q P PP          P P
Sbjct: 723 PKSKKKGHPGREQKKHHHHHHQQMQQAPA--------PVPQQPPPPPQQ--------PPP 766

Query: 360 PFPP-MAQPVIPPTPPVQQPFQASFQAQNEP 389
           P PP   Q   PP PP   P QA+   ++ P
Sbjct: 767 PPPPQQQQQPPPPPPPPSMPQQAAPAMKSSP 797



 Score = 32.3 bits (72), Expect = 2.6
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 9/60 (15%)

Query: 637  TEPVSPIPKPLPVPVPPIPVPAPITVPP-PQVPPHQPGPPVVGALQPPAFTPPLGIPPPG 695
            +EP SP  +P P P  P  + AP+ +P  P++ P   G PV+         P    PPPG
Sbjct: 1122 SEPFSPSLRPEP-PKHPESIKAPVHLPQRPEMKPVDVGRPVIRP-------PEQNAPPPG 1173


>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
          Length = 1263

 Score =  100 bits (249), Expect = 8e-21
 Identities = 87/254 (34%), Positives = 103/254 (40%), Gaps = 67/254 (26%)

Query: 658 APITVPP--PQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFN 715
           A ITVPP  P   P  P PP+ G        PP   P     P  PPPPPPPP   PG  
Sbjct: 559 AAITVPPSVPSRAPVPPAPPLPG--DSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGV 616

Query: 716 PMHLPPGFLPPG----PPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIP 771
            +  PP  LP G    PPPP++   +IPPP  PP+                   +G P P
Sbjct: 617 CISSPPS-LPGGTAISPPPPLSGDATIPPP--PPLPE----------------GVGIPSP 657

Query: 772 TVVSGARGNAESGDSVKMYGSAVPPAAP----TNLPTPPVTQPVSLLGTQGVAPGPVIGL 827
           + + G              G+A+PP  P      +P PP   P    G+ G+ P P    
Sbjct: 658 SSLPG--------------GTAIPPPPPLPGSARIPPPPPPLP----GSAGIPPPP---- 695

Query: 828 QAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPG-GFAMPP 886
             P  G  G  P   PL   PG+PPP        PP P  P +    PPP PG G   PP
Sbjct: 696 -PPLPGEAGMPPPPPPLPGGPGIPPP--------PPFPGGPGI----PPPPPGMGMPPPP 742

Query: 887 PHGMKGPFPPHGPF 900
           P G   P  P  PF
Sbjct: 743 PFGFGVPAAPVLPF 756



 Score = 82.4 bits (202), Expect = 2e-15
 Identities = 76/252 (30%), Positives = 87/252 (34%), Gaps = 82/252 (32%)

Query: 639 PVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGAL---QPPAFTPPLGI--PP 693
           P  P+P      +PP P P   T PPP  PP  P PP+ G +    PP+      I  PP
Sbjct: 575 PAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPP 634

Query: 694 PGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTI 753
           P  G    PPPPP P      +P  LP G   P PPPP+     IPPP  P   +P S  
Sbjct: 635 PLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIP-PPPPLPGSARIPPPPPP---LPGSA- 689

Query: 754 AGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSL 813
                        G P P                       PP  P     PP   P  L
Sbjct: 690 -------------GIPPP-----------------------PPPLPGEAGMPP--PPPPL 711

Query: 814 LGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHR 873
            G  G+ P P                   P    PG+PPP             PP M   
Sbjct: 712 PGGPGIPPPP-------------------PFPGGPGIPPP-------------PPGM--G 737

Query: 874 GPPPGPGGFAMP 885
            PPP P GF +P
Sbjct: 738 MPPPPPFGFGVP 749



 Score = 65.1 bits (157), Expect = 4e-10
 Identities = 51/137 (37%), Positives = 67/137 (48%), Gaps = 22/137 (16%)

Query: 630 GGAETSHTEPVS---PIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFT 686
           GG   S   P+S    IP P P+P   + +P+P ++P     P  P PP+ G+ + P   
Sbjct: 626 GGTAISPPPPLSGDATIPPPPPLP-EGVGIPSPSSLPGGTAIP--PPPPLPGSARIPPPP 682

Query: 687 PPL----GIPPP----GFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPP--PPITPPV 736
           PPL    GIPPP        G+PPPPPP P   PG  P   PP F  PG P  PP  P +
Sbjct: 683 PPLPGSAGIPPPPPPLPGEAGMPPPPPPLPG-GPGIPP---PPPF--PGGPGIPPPPPGM 736

Query: 737 SIPPPHTPPISIPNSTI 753
            +PPP      +P + +
Sbjct: 737 GMPPPPPFGFGVPAAPV 753



 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 55/189 (29%), Positives = 66/189 (34%), Gaps = 33/189 (17%)

Query: 794 VPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPP 853
           VPP+ P+  P PP        GT  + P P      P+ G     P   P   PP  PPP
Sbjct: 563 VPPSVPSRAPVPPAPPLPGDSGT--IIPPP------PAPGDSTTPP---PPPPPPPPPPP 611

Query: 854 -----HLQRFP-------LMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKG-----PFPP 896
                 +   P       + PP P+        PPP P G  +P P  + G     P PP
Sbjct: 612 LPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPP 671

Query: 897 HGPFVR----PGGMPGLGG-PGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQ 951
                R    P  +PG  G P P P  P +      PP  P     P  P  P       
Sbjct: 672 LPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPP 731

Query: 952 PPPSQQPPP 960
           PPP    PP
Sbjct: 732 PPPGMGMPP 740



 Score = 41.6 bits (96), Expect = 0.004
 Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 23/140 (16%)

Query: 259 VEESKKE--DTTAVTTTAPA-----AAVPPAPT------ATVPAAAAPAAAS-----PPP 300
           +E++KKE    +A   T P      A VPPAP         +P   AP  ++     PPP
Sbjct: 546 LEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPP 605

Query: 301 PQAPFGFPGDG-MQQPAYTQHQNMDQFQPRMMGIQQ----DPMHHQVPLPPNGQMPGFGL 355
           P  P   PG   +  P            P + G        P+   V +P    +PG   
Sbjct: 606 PPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTA 665

Query: 356 LPTPPFPPMAQPVIPPTPPV 375
           +P PP  P +  + PP PP+
Sbjct: 666 IPPPPPLPGSARIPPPPPPL 685



 Score = 41.6 bits (96), Expect = 0.004
 Identities = 41/179 (22%), Positives = 52/179 (29%), Gaps = 49/179 (27%)

Query: 196 PPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDE 255
           PP P  P      ++   ++      +P  P    A  PPP                   
Sbjct: 605 PPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPL---------------- 648

Query: 256 PEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQP 315
           PE V           T   P   +P +     P    P +A  PPP  P   PG+     
Sbjct: 649 PEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPP--LPGEA---- 702

Query: 316 AYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPP 374
                                     +P PP     G G+ P PPFP    P IPP PP
Sbjct: 703 -------------------------GMPPPPPPLPGGPGIPPPPPFP--GGPGIPPPPP 734



 Score = 36.2 bits (82), Expect = 0.18
 Identities = 40/127 (31%), Positives = 47/127 (37%), Gaps = 25/127 (19%)

Query: 859 PLMPPR-PMPPHMMHRGPP-PGPGGFAMPPPHG-------MKGPFPPHGPFVRPGGM--- 906
           P +P R P+PP      PP PG  G  +PPP            P PP  P   PGG+   
Sbjct: 565 PSVPSRAPVPP-----APPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCIS 619

Query: 907 --PGL-GGPGPGPGGPEDRDGR-QQPPQQPQQQPQPQAPQQPQQQQQQQPPP----SQQP 958
             P L GG    P  P   D     PP  P+    P     P       PPP    ++ P
Sbjct: 620 SPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIP 679

Query: 959 PPTQQQP 965
           PP    P
Sbjct: 680 PPPPPLP 686


>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
          Length = 1272

 Score =  100 bits (249), Expect = 8e-21
 Identities = 87/254 (34%), Positives = 103/254 (40%), Gaps = 67/254 (26%)

Query: 658 APITVPP--PQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFN 715
           A ITVPP  P   P  P PP+ G        PP   P     P  PPPPPPPP   PG  
Sbjct: 568 AAITVPPSVPSRAPVPPAPPLPG--DSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGV 625

Query: 716 PMHLPPGFLPPG----PPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIP 771
            +  PP  LP G    PPPP++   +IPPP  PP+                   +G P P
Sbjct: 626 CISSPPS-LPGGTAISPPPPLSGDATIPPP--PPLPE----------------GVGIPSP 666

Query: 772 TVVSGARGNAESGDSVKMYGSAVPPAAP----TNLPTPPVTQPVSLLGTQGVAPGPVIGL 827
           + + G              G+A+PP  P      +P PP   P    G+ G+ P P    
Sbjct: 667 SSLPG--------------GTAIPPPPPLPGSARIPPPPPPLP----GSAGIPPPP---- 704

Query: 828 QAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPG-GFAMPP 886
             P  G  G  P   PL   PG+PPP        PP P  P +    PPP PG G   PP
Sbjct: 705 -PPLPGEAGMPPPPPPLPGGPGIPPP--------PPFPGGPGI----PPPPPGMGMPPPP 751

Query: 887 PHGMKGPFPPHGPF 900
           P G   P  P  PF
Sbjct: 752 PFGFGVPAAPVLPF 765



 Score = 82.4 bits (202), Expect = 2e-15
 Identities = 76/252 (30%), Positives = 87/252 (34%), Gaps = 82/252 (32%)

Query: 639 PVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGAL---QPPAFTPPLGI--PP 693
           P  P+P      +PP P P   T PPP  PP  P PP+ G +    PP+      I  PP
Sbjct: 584 PAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPP 643

Query: 694 PGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTI 753
           P  G    PPPPP P      +P  LP G   P PPPP+     IPPP  P   +P S  
Sbjct: 644 PLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIP-PPPPLPGSARIPPPPPP---LPGSA- 698

Query: 754 AGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSL 813
                        G P P                       PP  P     PP   P  L
Sbjct: 699 -------------GIPPP-----------------------PPPLPGEAGMPP--PPPPL 720

Query: 814 LGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHR 873
            G  G+ P P                   P    PG+PPP             PP M   
Sbjct: 721 PGGPGIPPPP-------------------PFPGGPGIPPP-------------PPGM--G 746

Query: 874 GPPPGPGGFAMP 885
            PPP P GF +P
Sbjct: 747 MPPPPPFGFGVP 758



 Score = 65.1 bits (157), Expect = 4e-10
 Identities = 51/137 (37%), Positives = 67/137 (48%), Gaps = 22/137 (16%)

Query: 630 GGAETSHTEPVS---PIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFT 686
           GG   S   P+S    IP P P+P   + +P+P ++P     P  P PP+ G+ + P   
Sbjct: 635 GGTAISPPPPLSGDATIPPPPPLP-EGVGIPSPSSLPGGTAIP--PPPPLPGSARIPPPP 691

Query: 687 PPL----GIPPP----GFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPP--PPITPPV 736
           PPL    GIPPP        G+PPPPPP P   PG  P   PP F  PG P  PP  P +
Sbjct: 692 PPLPGSAGIPPPPPPLPGEAGMPPPPPPLPG-GPGIPP---PPPF--PGGPGIPPPPPGM 745

Query: 737 SIPPPHTPPISIPNSTI 753
            +PPP      +P + +
Sbjct: 746 GMPPPPPFGFGVPAAPV 762



 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 55/189 (29%), Positives = 66/189 (34%), Gaps = 33/189 (17%)

Query: 794 VPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPP 853
           VPP+ P+  P PP        GT  + P P      P+ G     P   P   PP  PPP
Sbjct: 572 VPPSVPSRAPVPPAPPLPGDSGT--IIPPP------PAPGDSTTPP---PPPPPPPPPPP 620

Query: 854 -----HLQRFP-------LMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKG-----PFPP 896
                 +   P       + PP P+        PPP P G  +P P  + G     P PP
Sbjct: 621 LPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPP 680

Query: 897 HGPFVR----PGGMPGLGG-PGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQ 951
                R    P  +PG  G P P P  P +      PP  P     P  P  P       
Sbjct: 681 LPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPP 740

Query: 952 PPPSQQPPP 960
           PPP    PP
Sbjct: 741 PPPGMGMPP 749



 Score = 41.6 bits (96), Expect = 0.004
 Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 23/140 (16%)

Query: 259 VEESKKE--DTTAVTTTAPA-----AAVPPAPT------ATVPAAAAPAAAS-----PPP 300
           +E++KKE    +A   T P      A VPPAP         +P   AP  ++     PPP
Sbjct: 555 LEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPP 614

Query: 301 PQAPFGFPGDG-MQQPAYTQHQNMDQFQPRMMGIQQ----DPMHHQVPLPPNGQMPGFGL 355
           P  P   PG   +  P            P + G        P+   V +P    +PG   
Sbjct: 615 PPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTA 674

Query: 356 LPTPPFPPMAQPVIPPTPPV 375
           +P PP  P +  + PP PP+
Sbjct: 675 IPPPPPLPGSARIPPPPPPL 694



 Score = 41.6 bits (96), Expect = 0.004
 Identities = 41/179 (22%), Positives = 52/179 (29%), Gaps = 49/179 (27%)

Query: 196 PPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDE 255
           PP P  P      ++   ++      +P  P    A  PPP                   
Sbjct: 614 PPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPL---------------- 657

Query: 256 PEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQP 315
           PE V           T   P   +P +     P    P +A  PPP  P   PG+     
Sbjct: 658 PEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPP--LPGEA---- 711

Query: 316 AYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPP 374
                                     +P PP     G G+ P PPFP    P IPP PP
Sbjct: 712 -------------------------GMPPPPPPLPGGPGIPPPPPFP--GGPGIPPPPP 743



 Score = 36.2 bits (82), Expect = 0.18
 Identities = 40/127 (31%), Positives = 47/127 (37%), Gaps = 25/127 (19%)

Query: 859 PLMPPR-PMPPHMMHRGPP-PGPGGFAMPPPHG-------MKGPFPPHGPFVRPGGM--- 906
           P +P R P+PP      PP PG  G  +PPP            P PP  P   PGG+   
Sbjct: 574 PSVPSRAPVPP-----APPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCIS 628

Query: 907 --PGL-GGPGPGPGGPEDRDGR-QQPPQQPQQQPQPQAPQQPQQQQQQQPPP----SQQP 958
             P L GG    P  P   D     PP  P+    P     P       PPP    ++ P
Sbjct: 629 SPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIP 688

Query: 959 PPTQQQP 965
           PP    P
Sbjct: 689 PPPPPLP 695


>gi|146134388 YLP motif containing 1 [Homo sapiens]
          Length = 2146

 Score = 99.8 bits (247), Expect = 1e-20
 Identities = 210/922 (22%), Positives = 321/922 (34%), Gaps = 147/922 (15%)

Query: 140 PPPPVKVSSEPPTQATPNSVPA-------VPQLPSSDAFAA-----VAQLFQTTQ--GQQ 185
           PPPPV     PP  A P + P         P  PSS  F +     +AQL Q  Q   +Q
Sbjct: 15  PPPPVP---PPPPVALPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMHQKQ 71

Query: 186 LQQILQTFQQPPKP--QSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFD 243
           +Q +LQ    PP P    P +        Q         P  P       PPP    ++ 
Sbjct: 72  MQCVLQPHHLPPPPLPPPPVMPGGGYGDWQP------PPPPMP-------PPPGPALSYQ 118

Query: 244 KKLLDRFDY----DDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPP 299
           K+   +        D P  +   + E         P + +PP+ +   P    P+   P 
Sbjct: 119 KQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPT 178

Query: 300 P--PQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGF---- 353
              P  P   P      P+ +       +       Q    H Q  LP +   P      
Sbjct: 179 SSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQG 238

Query: 354 ---GLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPCIQEVK 410
                L  PP PP A P    T   Q+P ++  + ++    Q   + +     P  Q+  
Sbjct: 239 HSKSQLLAPP-PPSAPPGNKTTVQ-QEPLESGAKNKSTEQQQAAPEPDPSTMTPQEQQQY 296

Query: 411 RHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDRE 470
            +       + R+    P  ++    ++      +   +     +   P S S E     
Sbjct: 297 WYRQHLLSLQQRTKVHLPGHKKGPVVAKDTPEPVKEEVTVPATSQ--VPESPSSEEPPLP 354

Query: 471 KERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGC 530
              E     LP  +P++           + D R  Q   A+   +      +      G 
Sbjct: 355 PPNEEVPPPLPPEEPQSEDP--------EEDARLKQLQAAAAHWQQHQQHRV------GF 400

Query: 531 AY--IVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIP 588
            Y  I+  H Q     LQ++ +   ++ Q    I   ++  ++  + +    +    Y  
Sbjct: 401 QYQGIMQKHTQ-----LQQILQQYQQIIQPPPHIQ-TMSVDMQLRHYEMQQQQFQHLYQE 454

Query: 589 WDK---VKPEELESFCEGGMLDS-DTLNPDWKGIPKKPENEVAQNGGA-ETSHTEPVSPI 643
           W++   +  E+L S+     L   +     W+G  K  ++ + +   + +    + +  +
Sbjct: 455 WEREFQLWEEQLHSYPHKDQLQEYEKQWKTWQGHMKATQSYLQEKVNSFQNMKNQYMGNM 514

Query: 644 PKPLPVPVPPIPVPAPITV-PPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVP- 701
             P P  VP   +P P+   PPP +PP  P P +  AL  PA  PP G+PPP   P +P 
Sbjct: 515 SMPPPF-VPYSQMPPPLPTMPPPVLPPSLPPPVMPPAL--PATVPPPGMPPPVMPPSLPT 571

Query: 702 --PPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSI----PPP---------HTPPI 746
             PPP  PP L     P  LPP  L    PPP+ PP S+    PPP          TPP 
Sbjct: 572 SVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPP 631

Query: 747 SIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNL---P 803
            IP     G+ +     L+   P+P         A S  S ++     P   PT +    
Sbjct: 632 GIPP---PGVPQGIPPQLTAA-PVPP--------ASSSQSSQVPEKPRPALLPTPVSFGS 679

Query: 804 TPPVTQPVSLLGTQGVAPGPVIGLQAPST------GLLGARPGLIPLQRPPGMPPPHLQR 857
            PP T    L   Q   P   +  +AP +          +  GL      P  P   ++ 
Sbjct: 680 APPTTYHPPL---QSAGPSEQVNSKAPLSKSALPYSSFSSDQGLGESSAAPSQPITAVKD 736

Query: 858 FPLMPP--RPMPPHMMHRGPPPGPGGFAMPP-----PHGMKGPFP---------PHGPFV 901
            P+      P PP   +   P GP  F  P          +GP P         P GP  
Sbjct: 737 MPVRSGGLLPDPPRSSYLESPRGP-RFDGPRRFEDLGSRCEGPRPKGPRFEGNRPDGPRP 795

Query: 902 RPGGMPGLGGP---GPGPGGPEDR----DGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPP 954
           R  G P  G     G  P GP  +          P+  Q  PQ + P+    QQ QQ P 
Sbjct: 796 RYEGHPAEGTKSKWGMIPRGPASQFYITPSTSLSPR--QSGPQWKGPKPAFGQQHQQQPK 853

Query: 955 SQ-QPPPTQQQPQQFRNDNRQQ 975
           SQ +P    ++P    + N+Q+
Sbjct: 854 SQAEPLSGNKEPLADTSSNQQK 875



 Score = 95.5 bits (236), Expect = 3e-19
 Identities = 103/376 (27%), Positives = 137/376 (36%), Gaps = 59/376 (15%)

Query: 639 PVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTP--PLGIPPPGF 696
           P S +P PLP   PP+    P ++PPP +PP  P       + PP   P  P  +PPPG 
Sbjct: 522 PYSQMPPPLPTMPPPV---LPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGM 578

Query: 697 GPGV----PPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI---------TPPVSIPPPHT 743
            P +    PPP  PPP L     P  LPP  L    PPP+         TPP  IPPP  
Sbjct: 579 PPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGV 638

Query: 744 PPISIPNSTIAGINEDTTKD----------------LSIGNPIPTVVSGARGNAESGDSV 787
           P    P  T A +   ++                  +S G+  PT       +A   + V
Sbjct: 639 PQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHPPLQSAGPSEQV 698

Query: 788 KMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVI----GLQAPSTGLLGARPGLIP 843
               ++  P + + LP    +    L G    AP   I     +   S GLL   P    
Sbjct: 699 ----NSKAPLSKSALPYSSFSSDQGL-GESSAAPSQPITAVKDMPVRSGGLLPDPPRSSY 753

Query: 844 LQRPPGMPPPHLQRFPLMP-----PRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFP--P 896
           L+ P G      +RF  +      PRP  P      P      +   P  G K  +   P
Sbjct: 754 LESPRGPRFDGPRRFEDLGSRCEGPRPKGPRFEGNRPDGPRPRYEGHPAEGTKSKWGMIP 813

Query: 897 HGP----FVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQP 952
            GP    ++ P         GP   GP+   G     QQ QQQP+ QA      ++    
Sbjct: 814 RGPASQFYITPSTSLSPRQSGPQWKGPKPAFG-----QQHQQQPKSQAEPLSGNKEPLAD 868

Query: 953 PPSQQPPPTQQQPQQF 968
             S Q    + Q   F
Sbjct: 869 TSSNQQKNFKMQSAAF 884



 Score = 65.1 bits (157), Expect = 4e-10
 Identities = 83/319 (26%), Positives = 113/319 (35%), Gaps = 70/319 (21%)

Query: 717  MHLPPGFLP--------PGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGN 768
            M +PP F+P        P  PPP+ PP S+PPP  PP ++P +T+             G 
Sbjct: 514  MSMPPPFVPYSQMPPPLPTMPPPVLPP-SLPPPVMPP-ALP-ATVP----------PPGM 560

Query: 769  PIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQ 828
            P P                      +PP+ PT++P P +   +S  G   V P P +   
Sbjct: 561  PPP---------------------VMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSA 599

Query: 829  APSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPH 888
             P   L    P L     PP MP P L      PP  +PP  + +G PP      +PP  
Sbjct: 600  GPPPVL--PPPSLSSTAPPPVMPLPPLS--SATPPPGIPPPGVPQGIPPQLTAAPVPPAS 655

Query: 889  GMKGPFPPHGPFVRPGGMPGLGGPGPGP----------GGPEDRDGRQQP------PQQP 932
              +    P  P  RP  +P     G  P           GP ++   + P      P   
Sbjct: 656  SSQSSQVPEKP--RPALLPTPVSFGSAPPTTYHPPLQSAGPSEQVNSKAPLSKSALPYSS 713

Query: 933  QQQPQ-----PQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGR 987
                Q       AP QP    +  P  S    P   +     +    +F+  R  E  G 
Sbjct: 714  FSSDQGLGESSAAPSQPITAVKDMPVRSGGLLPDPPRSSYLESPRGPRFDGPRRFEDLGS 773

Query: 988  RSFGNRVENDRERYGNRND 1006
            R  G R +  R   GNR D
Sbjct: 774  RCEGPRPKGPRFE-GNRPD 791



 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 75/277 (27%), Positives = 106/277 (38%), Gaps = 56/277 (20%)

Query: 837  ARPGLIPLQRPPGM--PPPHLQRFPLMPPRPMPPHMMHRGP---PPGPGGFAMPPPHGMK 891
            +RPG+ P   PPG   PPP + + P    RP  P      P   PP P     PPP    
Sbjct: 1501 SRPGMYP---PPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPP---- 1553

Query: 892  GPFPPHGPFVRP------------GGMPGLGGPGPGPG-GPEDRDGRQQPPQQPQQQPQP 938
             P PP  P ++P                GL       G   E +      P  P   P P
Sbjct: 1554 -PLPPPPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSETAAIPSAPVLPPPP 1612

Query: 939  -QAPQQPQQQQQQQPPPSQQPPPTQQ-----QPQQFRNDNRQQFNSGR------------ 980
              +   P        PP  +PPP QQ       +    +  +Q   G             
Sbjct: 1613 VHSSIPPPGPVPMGMPPMSKPPPVQQTVDYGHGRDISTNKVEQIPYGERITLRPDPLPER 1672

Query: 981  ---DQERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNRR 1037
               + E  G+R   +R E DRE Y +R   + N   D R++ R   DR+ HRD  +R+R 
Sbjct: 1673 STFETEHAGQRDRYDR-ERDREPYFDR---QSNVIADHRDFKR---DRETHRD-RDRDRG 1724

Query: 1038 SSGHRDRERDSRDRESRREKEEARGKEKPEVTDRAGG 1074
               + DR+R  R+R  R ++ ++   +K   + R GG
Sbjct: 1725 VIDY-DRDRFDRERRPRDDRAQSYRDKKDHSSSRRGG 1760



 Score = 47.4 bits (111), Expect = 8e-05
 Identities = 56/194 (28%), Positives = 70/194 (36%), Gaps = 39/194 (20%)

Query: 665  PQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLP-PGF 723
            PQ+  H P  P    LQ  +  P +  PP  + P  P   PP   +RP   P     P  
Sbjct: 1483 PQMADHLP--PQESRLQNTSSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVT 1540

Query: 724  LPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAES 783
             PP P PP  PP  + PP  PP  I   T A   E   +D   G        G     +S
Sbjct: 1541 RPPVPIPPPPPPPPL-PP--PPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKS 1597

Query: 784  GDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIP 843
                    +A  P+AP  LP PPV   +         PGPV                  P
Sbjct: 1598 -------ETAAIPSAPV-LPPPPVHSSIP-------PPGPV------------------P 1624

Query: 844  LQRPPGMPPPHLQR 857
            +  PP   PP +Q+
Sbjct: 1625 MGMPPMSKPPPVQQ 1638



 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 76/299 (25%), Positives = 104/299 (34%), Gaps = 54/299 (18%)

Query: 128 PVAENVTNNEGSPPPPVKVSSEPP-----TQATPNSVPAVPQL--PSSDA-----FAAVA 175
           PV E VT    S  P    S EPP      +  P   P  PQ   P  DA      AA A
Sbjct: 329 PVKEEVTVPATSQVPESPSSEEPPLPPPNEEVPPPLPPEEPQSEDPEEDARLKQLQAAAA 388

Query: 176 QLFQTTQGQ-------------QLQQILQTFQQ----PPKPQSPALDNAV------MAQV 212
              Q  Q +             QLQQILQ +QQ    PP  Q+ ++D  +        Q 
Sbjct: 389 HWQQHQQHRVGFQYQGIMQKHTQLQQILQQYQQIIQPPPHIQTMSVDMQLRHYEMQQQQF 448

Query: 213 QAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAV-- 270
           Q +  + +       EQ  ++P  +Q   ++K+      +    +A +   +E   +   
Sbjct: 449 QHLYQEWEREFQLWEEQLHSYPHKDQLQEYEKQWK---TWQGHMKATQSYLQEKVNSFQN 505

Query: 271 -------TTTAPAAAVP----PAPTATVPAAAAPAAASPP--PPQAPFGFPGDGMQQPAY 317
                    + P   VP    P P  T+P    P +  PP  PP  P   P  GM  P  
Sbjct: 506 MKNQYMGNMSMPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVM 565

Query: 318 TQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPG-FGLLPTPPFPPMAQPVIPPTPPV 375
                     P M           V  PP+    G   +LP P     A P + P PP+
Sbjct: 566 PPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPL 624



 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 46/172 (26%), Positives = 62/172 (36%), Gaps = 58/172 (33%)

Query: 614  DWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPG 673
            D+   P+  ++   Q    + + + P    P     P PP+  P P ++  P  PP +  
Sbjct: 1478 DFGSEPQMADHLPPQESRLQNTSSRPGMYPPPGSYRPPPPMGKP-PGSIVRPSAPPARSS 1536

Query: 674  PPVVGALQPPAFTPPLGIPPPGFGPGVPPP--PPPPPFLRP------------------- 712
             PV          PP+ IPPP      PPP  PPPPP ++P                   
Sbjct: 1537 VPVT--------RPPVPIPPPP-----PPPPLPPPPPVIKPQTSAVEQERWDEDSFYGLW 1583

Query: 713  ------GFN-------------PMHLPP----GFLPPGPPPPITPPVSIPPP 741
                  G N             P+  PP       PPGP P   PP+S PPP
Sbjct: 1584 DTNDEQGLNSEFKSETAAIPSAPVLPPPPVHSSIPPPGPVPMGMPPMSKPPP 1635



 Score = 42.0 bits (97), Expect = 0.003
 Identities = 54/226 (23%), Positives = 81/226 (35%), Gaps = 40/226 (17%)

Query: 280  PPAPTA--TVPAAAAPAAASPPPPQAPFGFPGDGMQ-QPAYTQHQNMDQ----------- 325
            P AP A  +VP    P    PPPP  P   P   ++ Q +  + +  D+           
Sbjct: 1528 PSAPPARSSVPVTRPPVPIPPPPPPPPLPPPPPVIKPQTSAVEQERWDEDSFYGLWDTND 1587

Query: 326  -------FQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQ- 377
                   F+     I   P+     LPP    P    +P P   PM  P +   PPVQQ 
Sbjct: 1588 EQGLNSEFKSETAAIPSAPV-----LPPP---PVHSSIPPPGPVPMGMPPMSKPPPVQQT 1639

Query: 378  -PFQASFQAQNEPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSG 436
              +          + Q P+ + + +    + E     +++   R R       R R R  
Sbjct: 1640 VDYGHGRDISTNKVEQIPYGERITLRPDPLPERSTFETEHAGQRDRY-----DRERDREP 1694

Query: 437  SRSRRSR---HRRSRSRSRDRRRHSPRSRSQERRDREK-ERERRQK 478
               R+S      R   R R+  R   R R     DR++ +RERR +
Sbjct: 1695 YFDRQSNVIADHRDFKRDRETHRDRDRDRGVIDYDRDRFDRERRPR 1740



 Score = 37.4 bits (85), Expect = 0.081
 Identities = 74/350 (21%), Positives = 113/350 (32%), Gaps = 81/350 (23%)

Query: 131  ENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQIL 190
            +N ++  G  PPP      PP    P S+   P  P + +   V +              
Sbjct: 1497 QNTSSRPGMYPPPGSYRPPPPMGKPPGSIVR-PSAPPARSSVPVTR-------------- 1541

Query: 191  QTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRF 250
                 PP P  P L                  P  P   K      EQ+   +      +
Sbjct: 1542 PPVPIPPPPPPPPL------------------PPPPPVIKPQTSAVEQERWDEDSFYGLW 1583

Query: 251  DYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGD 310
            D +DE     E K E  TA   +AP    PP  ++            PPP   P G P  
Sbjct: 1584 DTNDEQGLNSEFKSE--TAAIPSAPVLPPPPVHSSI-----------PPPGPVPMGMP-- 1628

Query: 311  GMQQPAYTQHQNMDQFQPRMMG---IQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQP 367
             M +P   Q Q +D    R +    ++Q P   ++ L P+               P+   
Sbjct: 1629 PMSKPPPVQ-QTVDYGHGRDISTNKVEQIPYGERITLRPD---------------PL--- 1669

Query: 368  VIPPTPPVQQPFQASFQAQNEPL-TQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASR 426
                  P +  F+     Q +    ++  +   + +   I + +    D    R R   R
Sbjct: 1670 ------PERSTFETEHAGQRDRYDRERDREPYFDRQSNVIADHRDFKRDRETHRDRDRDR 1723

Query: 427  SPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERR---DREKER 473
                       R RR R  R++S  RD++ HS   R    R   DR+ +R
Sbjct: 1724 GVIDYDRDRFDRERRPRDDRAQS-YRDKKDHSSSRRGGFDRPSYDRKSDR 1772



 Score = 35.8 bits (81), Expect = 0.24
 Identities = 53/212 (25%), Positives = 84/212 (39%), Gaps = 35/212 (16%)

Query: 875  PPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRD-----GRQQPP 929
            P PG GG  M P H  +   PP  P+           P  G   P +R+      R++  
Sbjct: 1171 PEPGDGGEKMYPYHRDE---PPRAPWNHGEERGHEEFPLDGRNAPMERERLDDWDRERYW 1227

Query: 930  QQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQP--------QQFRND-NRQ-QFNSG 979
            ++ ++  Q    +   ++ +   PPS+     ++ P        Q    D NR+ + +  
Sbjct: 1228 RECERDYQDDTLELYNREDRFSAPPSRSHDGDRRGPWWDDWERDQDMDEDYNREMERDMD 1287

Query: 980  RDQERFGR------RSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRS-------PDRD 1026
            RD +R  R      RS  N  + D   YG   D++++  R+R              P  D
Sbjct: 1288 RDVDRISRPMDMYDRSLDNEWDRD---YGRPLDEQESQFRERDIPSLPPLPPLPPLPPLD 1344

Query: 1027 RHRDLEERNRRSSGHRDRERDSRDRESRREKE 1058
            R+RD   R  R+  H   +RD RDR   R +E
Sbjct: 1345 RYRDDRWREERNREH-GYDRDFRDRGELRIRE 1375



 Score = 33.9 bits (76), Expect = 0.90
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 46/201 (22%)

Query: 861  MPPRPMPPHMMHRGPPPGPG----GFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGP 916
            +PPR        RGPP GPG    G         +GPF P          PG GG    P
Sbjct: 1134 IPPRRAGSR--ERGPPRGPGSRERGLGRSDFGRDRGPFRPE---------PGDGGEKMYP 1182

Query: 917  GGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQF 976
                    R +PP+ P    +       ++  ++ P   +  P  +++   +        
Sbjct: 1183 ------YHRDEPPRAPWNHGE-------ERGHEEFPLDGRNAPMERERLDDW-------- 1221

Query: 977  NSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSP---DRDRHRDLEE 1033
                D+ER+ R    +  ++  E Y NR D          +  RR P   D +R +D++E
Sbjct: 1222 ----DRERYWRECERDYQDDTLELY-NREDRFSAPPSRSHDGDRRGPWWDDWERDQDMDE 1276

Query: 1034 RNRRSSGHRDRERDSRDRESR 1054
               R    RD +RD  DR SR
Sbjct: 1277 DYNREM-ERDMDRDV-DRISR 1295



 Score = 33.5 bits (75), Expect = 1.2
 Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 45/130 (34%)

Query: 251  DYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGD 310
            D+  EP+  +    +++    T++     PP           P +  PPPP    G P  
Sbjct: 1478 DFGSEPQMADHLPPQESRLQNTSSRPGMYPP-----------PGSYRPPPPM---GKPPG 1523

Query: 311  GMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPL--PPNGQMPGFGLLPTPPFPPMAQPV 368
             + +P+                    P    VP+  PP         +P PP PP   P 
Sbjct: 1524 SIVRPS------------------APPARSSVPVTRPP---------VPIPPPPP--PPP 1554

Query: 369  IPPTPPVQQP 378
            +PP PPV +P
Sbjct: 1555 LPPPPPVIKP 1564


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 113/383 (29%), Positives = 133/383 (34%), Gaps = 58/383 (15%)

Query: 608  SDTLNPDWKGIPKKPENEV-AQNGGAET-----SHTEPVSPIPKPLPVPVPPIPVPAPIT 661
            S    P  KG P  P   + +  GG  T     + T P +  P P   P  P P  AP  
Sbjct: 1046 SPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAP-- 1103

Query: 662  VPPPQVPPHQPG----PPVVGALQPPAFTPP-----LGIPPPGFGPGVP---PPPP---- 705
            +PP   PP   G    PP  GA   PA TPP     L  PPP   P  P   PP P    
Sbjct: 1104 MPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGL 1163

Query: 706  --PPPFLRPGFNPMHLPP----GFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINED 759
              PPP   P   P   PP    G   P P    T P + PP     ++ P+   A     
Sbjct: 1164 ATPPPKGAP-TTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA 1222

Query: 760  TTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGV 819
             T     G        GA     +       G A PP  P   PTPP   P SL G  G+
Sbjct: 1223 ATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPP--PKGAPTPPAATPPSLKG--GL 1278

Query: 820  APGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGP 879
            A  P  G  AP+       P ++    P G P     +    PP   PP      P   P
Sbjct: 1279 ATPPHKG--APN-------PAVVTPPSPKGGPATSPPKGAPTPPAATPP-----SPKGSP 1324

Query: 880  GGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGP----GPGGPEDRDGRQQPPQQPQQQ 935
            G    PPP G   P PP      P G P L    P    GP  P  ++G   P   P  +
Sbjct: 1325 G---TPPPKG--APTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHK 1379

Query: 936  PQPQAPQQPQQQQQQQPPPSQQP 958
              P       ++    P P   P
Sbjct: 1380 GGPAMTPPSPKRGPAIPSPKGDP 1402



 Score = 96.7 bits (239), Expect = 1e-19
 Identities = 107/378 (28%), Positives = 133/378 (35%), Gaps = 55/378 (14%)

Query: 622  PENEVAQNGGAETSHT--EPVSPIPKPLPVP------------VPP--IPVPAPITVPPP 665
            PEN ++  G  ++  T   P  P PK  P P            +PP   P P+ + +P P
Sbjct: 837  PENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFP 896

Query: 666  QVPPHQPGPPVVGALQPPAFTP--------PLGIPPPGFGPGVPPPP---PPPPF---LR 711
            +  P  P P    AL   + +P        P GIP      G P PP   PP P      
Sbjct: 897  KEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPAT 956

Query: 712  PGFNPMHLPPGFLPPGPP-PPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPI 770
            P       PP   PP P   P TP     P  TPP + P S   G    + K    G P 
Sbjct: 957  PSPKWAPTPPAATPPSPKGGPATPSPKGAP--TPPAATPPSPKGGPATPSPK----GAPT 1010

Query: 771  PTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAP 830
            P  V+          +    G++ PPAA    P  P   P +    +G    P   L +P
Sbjct: 1011 PPAVTPPSPKGSPAATPFPKGASTPPAA---TPPSPKGSPAATPLPKGAPTTPAATLPSP 1067

Query: 831  STGLLGARPGLIPLQRPPGMPPPHLQRFPLMPP---RPMPPHMMHRGPPPGPGGFAMPPP 887
              G   A P L     PP   PP  +  P  P     PMPP       PP P G    PP
Sbjct: 1068 KGG--PATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPP----AATPPSPKGGLATPP 1121

Query: 888  HGMKGPFPPHGPFVRPGGM---PGLGGP-GPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQ 943
            H      P   P    GG+   P  G P  P    P  + G   PP  P+  P   A   
Sbjct: 1122 HKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPP--PKGAPTTPAATP 1179

Query: 944  PQQQQQQQPPPSQQPPPT 961
            P  +     P  +  P T
Sbjct: 1180 PSPKGGLATPSPKGAPTT 1197



 Score = 93.6 bits (231), Expect = 1e-18
 Identities = 114/395 (28%), Positives = 134/395 (33%), Gaps = 63/395 (15%)

Query: 613  PDWKGIPKKPE-NEVAQNGGAET-----SHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQ 666
            P  KG P  P     +  GG  T     + T P +  P P      P P  AP T  P  
Sbjct: 1120 PPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTT--PAA 1177

Query: 667  VPPHQPG----PPVVGALQPPAFTPP-----LGIPPPGFGPGVPPPPPPPP---FLRPGF 714
             PP   G    P   GA   PA TPP     L  P P   P  P   PP P      P  
Sbjct: 1178 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSP 1237

Query: 715  NPMHLPPGFLPPGPPP-PITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTV 773
                  P   PP P   P TPP    P  TPP + P S   G+     K    G P P V
Sbjct: 1238 KGAPTTPAATPPSPKGGPATPPPKGAP--TPPAATPPSLKGGLATPPHK----GAPNPAV 1291

Query: 774  VSGARGNAESGDSVKMYGSAVPPAA-------------PTNLPTPPVTQPVSLLGTQ--- 817
            V+          S    G+  PPAA             P   PTPP   P S  GT    
Sbjct: 1292 VTPPSPKGGPATSPPK-GAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLP 1350

Query: 818  GVAPGPVIGLQAPSTGLLGARPGLIPLQRP-PGMPPPHLQRFPLMP-PR--PMPPHMMHR 873
               P    G   PS+      P   P  +  P M PP  +R P +P P+  P  P ++  
Sbjct: 1351 ATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPL 1410

Query: 874  GPPPGPG------GFAMPPPHGMKGPFPPHGPFVRPGGM---PGLGGPGPGPGGPEDRDG 924
             P   P       G A P     KG   P  P V P  +   P    P  GP  P  +  
Sbjct: 1411 SPKKAPATPVTREGAATPS----KGDLTP--PAVTPVSLKKAPATSAPKGGPATPSSKGD 1464

Query: 925  RQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPP 959
               P   P    +P AP+Q       +  P+   P
Sbjct: 1465 PTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAP 1499



 Score = 93.2 bits (230), Expect = 1e-18
 Identities = 118/432 (27%), Positives = 136/432 (31%), Gaps = 88/432 (20%)

Query: 613  PDWKGIPKKPENEVAQNGGAETSHTE---PVSPIPKPLPVP---VPPIPVPAPIT----- 661
            P  KGIP  P  + A    A T  +    P +P PK  P P    PP P   P T     
Sbjct: 925  PAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKG 984

Query: 662  --VPPPQVPPHQPGPPVV----GALQPPAFTPPLGIPPPGFGP---GVPPPP---PPPPF 709
               PP   PP   G P      GA  PPA TPP     P   P   G   PP   PP P 
Sbjct: 985  APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPK 1044

Query: 710  LRPGFNPMH-----LPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDL 764
              P   P+       P   LP     P TP +   P  TPP + P S   G    + K  
Sbjct: 1045 GSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAP--TPPAATPPSPKGGPATPSPK-- 1100

Query: 765  SIGNPIPTVVS--------------GARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQP 810
              G P+P   +              GA     +       G A PP  P   PT P   P
Sbjct: 1101 --GAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPP--PKGAPTTPAATP 1156

Query: 811  VSLLG-------------TQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQR 857
             S  G                  P P  GL  PS       P   P     G+  P  + 
Sbjct: 1157 PSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKG 1216

Query: 858  FPLMP-------------PRPMPPHMMHRGPPPGP-GGFAMPPPHGMKGPFPPHGPFVRP 903
             P  P             P P          PP P GG A PPP G   P P   P    
Sbjct: 1217 APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTP-PAATPPSLK 1275

Query: 904  GGM---PGLGGPGPG-------PGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPP 953
            GG+   P  G P P         GGP     +  P       P P+        +    P
Sbjct: 1276 GGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTP 1335

Query: 954  PSQQPPPTQQQP 965
            P+  PP  +  P
Sbjct: 1336 PAVTPPSPKGTP 1347



 Score = 87.8 bits (216), Expect = 5e-17
 Identities = 106/390 (27%), Positives = 126/390 (32%), Gaps = 53/390 (13%)

Query: 619  PKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVV- 677
            P  P  + A      +S  +     P P  +P  P P  AP   PP   PP   G P   
Sbjct: 900  PATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAP--TPPAATPPSPKGGPATP 957

Query: 678  ---GALQPPAFTPPLGIPPPGFGPGVPPP--PPPPPFLRPGFNPMHLPPGFLPPG--PPP 730
                A  PPA TP    P P  GP  P P   P PP   P  +P   P    P G   PP
Sbjct: 958  SPKWAPTPPAATP----PSPKGGPATPSPKGAPTPPAATPP-SPKGGPATPSPKGAPTPP 1012

Query: 731  PITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPI----PTVVSGARGNAESGDS 786
             +TPP     P   P     ST       + K      P+    PT  +    + + G +
Sbjct: 1013 AVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPA 1072

Query: 787  V-KMYGSAVPPAA-------------PTNLPTPPVTQPVSLLG------TQGVAPGPVIG 826
               + G+  PPAA             P   P PP   P S  G       +G    P   
Sbjct: 1073 TPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAAT 1132

Query: 827  LQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPP 886
              +P  GL    P   P    P   PP  +     PP    P      PP   GG A P 
Sbjct: 1133 PPSPKGGLATPPPKGAP--TTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPS 1190

Query: 887  PHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQ-APQQPQ 945
            P G   P  P      P G  GL  P P  G P         P+     P P+ AP  P 
Sbjct: 1191 PKG--APTTPAATPPSPKG--GLATPSP-KGAPTTPAATPPSPKGGLATPSPKGAPTTPA 1245

Query: 946  QQQQQ------QPPPSQQPPPTQQQPQQFR 969
                        PPP   P P    P   +
Sbjct: 1246 ATPPSPKGGPATPPPKGAPTPPAATPPSLK 1275



 Score = 74.3 bits (181), Expect = 6e-13
 Identities = 92/356 (25%), Positives = 116/356 (32%), Gaps = 65/356 (18%)

Query: 613  PDWKGIPKKPE-NEVAQNGGAETSHTEPVSPIPK---PLPVPVPPIPVPAPITVPPPQVP 668
            P  KG P  P     +  GG  T       P PK     P   PP P   P T PP    
Sbjct: 1212 PSPKGAPTTPAATPPSPKGGLAT-------PSPKGAPTTPAATPPSPKGGPATPPPK--- 1261

Query: 669  PHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNP---MHLPPGFLP 725
                G P   A  PP+    L  PP    P      PP P   P  +P      PP   P
Sbjct: 1262 ----GAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATP 1317

Query: 726  PGP------PPP---ITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSG 776
            P P      PPP    TPP   PP      ++P +T +     TT     G   P     
Sbjct: 1318 PSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPS 1377

Query: 777  ARGNAESGDSVKMYGSAVP-----PAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPS 831
             +G           G A+P     P +P  +P  P   P + +  +G A         PS
Sbjct: 1378 HKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAA--------TPS 1429

Query: 832  TGLLGARPGLIPLQRPPGMPPPHLQRFP-LMPPRPMPPHMMHRGPPPGPGGFAMPPPHGM 890
             G L           PP + P  L++ P    P+  P     +G P  P   A+ PP   
Sbjct: 1430 KGDL----------TPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLP---AVTPPSPK 1476

Query: 891  KGPFPPHGPFVRPGGMPGLGGPGPGPGGPED-----RDGRQQPPQQPQQQPQPQAP 941
            + P P     V     P      P P G            ++ P  P  +  P AP
Sbjct: 1477 EPPAPKQ---VATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAP 1529



 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 71/294 (24%), Positives = 98/294 (33%), Gaps = 13/294 (4%)

Query: 613  PDWKGIPKKPENEVAQNGGAETSHTE--PVSPIPKPL----PVPVPPIPVPAPITVPPPQ 666
            P  KG P  P    +  GG  T  ++  P  P   P     P   PP P   P  +P P+
Sbjct: 1341 PSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGP-AIPSPK 1399

Query: 667  VPPHQPGPPVVGALQPPAFTPPL--GIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFL 724
              P  P    +   + PA TP    G   P  G   PP   P    +             
Sbjct: 1400 GDPTSPAVIPLSPKKAPA-TPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPAT 1458

Query: 725  PPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNP-IPTVVSGARGNAES 783
            P     P  P V+ P P  PP     +T +   +       +G P +P V+  +     +
Sbjct: 1459 PSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPA 1518

Query: 784  GDSVKMYGSAVPPAAPTNLPTPPVTQPV-SLLGTQGVAPGPVIGLQAPSTGLLGARPGLI 842
              S +    A P A   +  TP    P  +L+      P P      P+     A P   
Sbjct: 1519 TPSSRRDPIA-PTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSK 1577

Query: 843  PLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPP 896
                PP + P   +  P      +PP +    P   P   A+ PP   KGP  P
Sbjct: 1578 EASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATP 1631



 Score = 57.4 bits (137), Expect = 8e-08
 Identities = 103/393 (26%), Positives = 130/393 (33%), Gaps = 54/393 (13%)

Query: 610  TLNPDWKG-IPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIP----VPAPITVPP 664
            T +P  +G +   P+N   + G   T  T P+ P       PV P P     P    V  
Sbjct: 672  TASPFLEGTVSLAPKNHPVKEG---TLTTLPLVPTASE-NCPVAPSPQNTCAPLATLVLA 727

Query: 665  PQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFL 724
            P++P   P P +  A  PP      GI        V   P   P    G +      G L
Sbjct: 728  PEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTL 787

Query: 725  PPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESG 784
                  P    VS+ P    P +   S  AG       D  IGN + + VS    +    
Sbjct: 788  TYLADSPSPLGVSVSPQTKRPPTKKGS--AG------PDTPIGN-LSSPVSPVEASFLPE 838

Query: 785  DSVKMYGSAVPPAAPTNLPTP------PVTQPVSLLGTQGVAPGP-------VIGLQAPS 831
            +S+   GS   PA  T+ PTP      P    V+ L  +GV   P       V+ L  P 
Sbjct: 839  NSLSFQGSKDSPAT-THSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPK 897

Query: 832  TGLLGARPGLIPLQRPPGMPPPHLQRFPL---MPPRPMP---PHMMHRGPPPGPGGFAMP 885
             G     P   P        P   +  P    +P  P P   P      PP   GG A P
Sbjct: 898  EGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATP 957

Query: 886  PPHGMKGPFPPHGPFVRPGGMPGL----GGPGPGPGGPEDRDGRQQPPQQPQQQPQPQA- 940
             P     P PP      P G P      G P P    P    G    P  P+  P P A 
Sbjct: 958  SPKW--APTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATP-SPKGAPTPPAV 1014

Query: 941  -PQQPQQQQQQQP-------PPSQQPPPTQQQP 965
             P  P+      P       PP+  PP  +  P
Sbjct: 1015 TPPSPKGSPAATPFPKGASTPPAATPPSPKGSP 1047



 Score = 53.9 bits (128), Expect = 8e-07
 Identities = 85/407 (20%), Positives = 124/407 (30%), Gaps = 52/407 (12%)

Query: 619  PKK-PENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVV 677
            PKK P     +   A  S  E  SP P   P      P P  + +PP    P     P  
Sbjct: 1558 PKKTPAIPTPKEAPATPSSKEASSP-PAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPT- 1615

Query: 678  GALQPPAFTPPLGIPPPGFGPGVPPP---PPPPPFLRPGFNPMHLPP-------GFLPP- 726
                PPA TP    P P  GP  P P   P  PP            P       G   P 
Sbjct: 1616 ----PPAVTP----PSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQ 1667

Query: 727  -------------------GPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIG 767
                                P P  TP ++ P    P     ++T   I  D +      
Sbjct: 1668 ASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSK 1727

Query: 768  NPIPTVVSG--ARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVI 825
             P+ TV          +S  + K   ++  P  P   P    + P++    + V P P  
Sbjct: 1728 GPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKP-- 1785

Query: 826  GLQAPSTGLLGARPGLIPLQRPPGMP--PPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFA 883
              ++ S     + P  +PL  P  +P  PP  Q  P  P   +        P        
Sbjct: 1786 --ESASVSAAPSPPVSLPL-APSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADEDELLP 1842

Query: 884  MPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGG--PEDRDGRQQPPQQPQQQPQPQAP 941
            + PP  + G  P     V        G P P P    P  ++ +    +    +  P+  
Sbjct: 1843 LIPPEPISGGVPFQSVLVNMPTPKSAGIPVPTPSAKQPVTKNNKGSGTESDSDESVPELE 1902

Query: 942  QQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRR 988
            +Q   Q   Q           ++P      +R +  + +   + G R
Sbjct: 1903 EQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLR 1949



 Score = 43.5 bits (101), Expect = 0.001
 Identities = 82/298 (27%), Positives = 101/298 (33%), Gaps = 53/298 (17%)

Query: 115  PLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSD-AFAA 173
            P L M   TS++   A      +G P  P    +  P  ATP S    P  PS   A   
Sbjct: 909  PALSM---TSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTP 965

Query: 174  VAQLFQTTQGQQLQQILQTFQQPP--KPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKA 231
             A    + +G       +    PP   P SP    A  +   A T     TP  P    A
Sbjct: 966  PAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPP-AVTPPSPKGSPA 1024

Query: 232  AFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAV-----TTTAPAAAVP-----P 281
            A P P+  +               P A   S K    A        T PAA +P     P
Sbjct: 1025 ATPFPKGAST-------------PPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGP 1071

Query: 282  APTATVPAAAAPAAASPPPPQ------APFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQ 335
            A T ++  A  P AA+PP P+      +P G P      PA T         P   G   
Sbjct: 1072 A-TPSLKGAPTPPAATPPSPKGGPATPSPKGAP----MPPAAT--------PPSPKGGLA 1118

Query: 336  DPMHHQVPLPPNGQMPG-FGLLPTPPFPPMAQPVIP-PTPPVQQPFQASFQAQNEPLT 391
             P H   P  P    P   G L TP  PP   P  P  TPP  +   A+   +  P T
Sbjct: 1119 TPPHKGAPTTPAATPPSPKGGLATP--PPKGAPTTPAATPPSPKGGLATPPPKGAPTT 1174



 Score = 43.5 bits (101), Expect = 0.001
 Identities = 75/334 (22%), Positives = 121/334 (36%), Gaps = 53/334 (15%)

Query: 139  SPPPPVKVSSEPPTQATPNSVPAVPQL----PSSDAF------AAVAQLFQTTQGQQLQQ 188
            +PP P K  + P  + TP S P  P      P+S A       A V Q  +    ++   
Sbjct: 1620 TPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPT 1679

Query: 189  ILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPT---QPSEQKAAFPP---------- 235
             L+     P P+S  +  A   +         T+P     PS +  +  P          
Sbjct: 1680 ALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLL 1739

Query: 236  PEQK-TAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVP----------PAPT 284
            P QK ++   K  D       P A  ESK   +T +T  A    +P          P+P 
Sbjct: 1740 PVQKDSSKTAKGKDASHSPKGPLAPPESKA--STPLTAAAFEKVLPKPESASVSAAPSPP 1797

Query: 285  ATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPL 344
             ++P A +P    PP  Q     PG  ++ P+          +P     + + +    P 
Sbjct: 1798 VSLPLAPSPVPTLPPKQQFLPSSPGLVLESPS----------KPLAPADEDELLPLIPPE 1847

Query: 345  PPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQ---AQNEPLTQKPHQQEMEV 401
            P +G +P   +L   P P  A  +  PTP  +QP   + +    +++     P  +E + 
Sbjct: 1848 PISGGVPFQSVLVNMPTPKSA-GIPVPTPSAKQPVTKNNKGSGTESDSDESVPELEEQDS 1906

Query: 402  EQPCIQEVKRHMS---DNRKSRSRSASRSPKRRR 432
             Q   Q+ +   +   D         SRS K+ R
Sbjct: 1907 TQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKAR 1940



 Score = 42.0 bits (97), Expect = 0.003
 Identities = 40/148 (27%), Positives = 48/148 (32%), Gaps = 31/148 (20%)

Query: 262 SKKEDTTAVTTTAPAAAVPPAPTATVPAA----AAPAAASPPPPQAPFGFPGDGMQQPAY 317
           SK    T  + T P+    P P+A  P +      P   +P P      FP +G   PA 
Sbjct: 846 SKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAP 905

Query: 318 TQHQNMDQFQ---------PRMMGIQQDPMHHQVPLPPNGQMP---GFGLLPTP---PFP 362
            Q   +             P   GI   P     P PP    P   G    P+P   P P
Sbjct: 906 KQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTP 965

Query: 363 PMAQPVIP------------PTPPVQQP 378
           P A P  P            PTPP   P
Sbjct: 966 PAATPPSPKGGPATPSPKGAPTPPAATP 993



 Score = 41.6 bits (96), Expect = 0.004
 Identities = 66/278 (23%), Positives = 82/278 (29%), Gaps = 62/278 (22%)

Query: 139  SPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQG------QQLQQILQT 192
            SP PP    +  P+  TP S   V   P      +V  L    +G      +Q   +  T
Sbjct: 855  SPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMT 914

Query: 193  FQQPPKPQSPALDNAVMAQVQ---------AITAQLKTTPTQPSEQKAAFPP-------- 235
               P K ++      + A            A     K  P  PS + A  PP        
Sbjct: 915  SSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPK 974

Query: 236  -----PEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVT---TTAPAAAVPPAPTATV 287
                 P  K A              P A   S K      +      P A  PP+P  + 
Sbjct: 975  GGPATPSPKGA-----------PTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSP 1023

Query: 288  PAAAAPAAASPPP---PQAPFG------FPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPM 338
             A   P  AS PP   P +P G       P      PA T         P   G    P 
Sbjct: 1024 AATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAAT--------LPSPKGGPATPS 1075

Query: 339  HHQVPLPPNGQMP---GFGLLPTPPFPPMAQPVIPPTP 373
                P PP    P   G    P+P   PM     PP+P
Sbjct: 1076 LKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSP 1113



 Score = 38.5 bits (88), Expect = 0.036
 Identities = 45/197 (22%), Positives = 67/197 (34%), Gaps = 20/197 (10%)

Query: 120  AAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQ 179
            A  +S   P    VT      PP  K   +  T ++P   PA P    +    AV     
Sbjct: 1457 ATPSSKGDPTLPAVTPPSPKEPPAPK---QVATSSSPKKAPATPAPMGAPTLPAVIP--- 1510

Query: 180  TTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKA-AFPPPEQ 238
             +  +++     + + P  P +  L     A +    A +    T PS +K  A P P++
Sbjct: 1511 -SSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKE 1569

Query: 239  -------KTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAA 291
                   K A     +    Y   P     S KE       T+P+    P P A  P + 
Sbjct: 1570 APATPSSKEASSPPAVTPSTYKGAP-----SPKELLIPPAVTSPSPKEAPTPPAVTPPSP 1624

Query: 292  APAAASPPPPQAPFGFP 308
                A+P P   P   P
Sbjct: 1625 EKGPATPAPKGTPTSPP 1641



 Score = 38.1 bits (87), Expect = 0.048
 Identities = 67/272 (24%), Positives = 81/272 (29%), Gaps = 47/272 (17%)

Query: 128  PVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQ 187
            P A    + +G P  P    +  P  ATP S    P  PS                    
Sbjct: 965  PPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPT-------------- 1010

Query: 188  QILQTFQQPP--KPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKK 245
                    PP   P SP    A     +  +     TP  P    AA P P+        
Sbjct: 1011 --------PPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPT---- 1058

Query: 246  LLDRFDYDDEPEAVEESKKEDTTAVT---TTAPAAAVPPAPTATVPAAAAPAAASPPPPQ 302
                      P A   S K      +      P AA PP+P    PA  +P  A P PP 
Sbjct: 1059 ---------TPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGG-PATPSPKGA-PMPPA 1107

Query: 303  APFGFPGDGMQQPAYTQHQNMD-QFQPRMMGIQQDPMHHQVPLPPNGQMPG-FGLLPTPP 360
            A    P  G+  P +           P   G    P     P  P    P   G L TP 
Sbjct: 1108 ATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATP- 1166

Query: 361  FPPMAQPVIP-PTPPVQQPFQASFQAQNEPLT 391
             PP   P  P  TPP  +   A+   +  P T
Sbjct: 1167 -PPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1197



 Score = 37.7 bits (86), Expect = 0.062
 Identities = 62/275 (22%), Positives = 88/275 (32%), Gaps = 28/275 (10%)

Query: 128  PVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQ 187
            P A    + +GSP  P    +  P   TP S    P LP++   +       +++     
Sbjct: 1312 PPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTP 1371

Query: 188  QILQTFQQ------PPKPQ------SPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPP 235
                   +      PP P+      SP  D    A +     +   TP   + + AA P 
Sbjct: 1372 PAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPV--TREGAATPS 1429

Query: 236  PEQKT--AFDKKLLDRFDYDDEPEA--VEESKKEDTTAVTTTAPAAAVPPAP----TATV 287
                T  A     L +      P+      S K D T    T P+   PPAP    T++ 
Sbjct: 1430 KGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSS 1489

Query: 288  PAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVP---- 343
            P  A    A    P  P   P    + PA T     D   P    + +       P    
Sbjct: 1490 PKKAPATPAPMGAPTLPAVIPSSPKEVPA-TPSSRRDPIAPTATLLSKKTPATLAPKEAL 1548

Query: 344  LPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQP 378
            +PP   +P     P  P P  A P  P +     P
Sbjct: 1549 IPPAMTVPSPKKTPAIPTPKEA-PATPSSKEASSP 1582



 Score = 35.4 bits (80), Expect = 0.31
 Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 33/188 (17%)

Query: 130 AENVTNNEGSPPPPVKVSSEP-----PTQATPNSVPAVPQ-LPSSDAFAAVAQLFQTTQG 183
           +E V N +G+P PP  VS+ P     P  +  + V ++PQ  P++    A  Q+  TT  
Sbjct: 193 SEVVPNPKGTPSPPCIVSTVPYHCVTPMASIQSGVASLPQTTPTTTLAIASPQVKDTT-- 250

Query: 184 QQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFP--PPEQKTA 241
                I      P  P S +L   V +   A++   ++ P   S QK A P  PP+   +
Sbjct: 251 -----ISSVLISPQNPGSLSLKGPV-SPPAALSLSTQSLPVVTSSQKTAGPNTPPDFPIS 304

Query: 242 FDKKLLDRFDYD---------------DEPEAVEESKKEDTTAVTTTAPAAAVPPAPT-- 284
               L                       +P     S    +T  +  +  + +PP P+  
Sbjct: 305 LGSHLAPLHQSSFGSVQLLGQTGPSALSDPTVKTISVDHSSTGASYPSQRSVIPPLPSRN 364

Query: 285 ATVPAAAA 292
             VPA  A
Sbjct: 365 EVVPATVA 372



 Score = 35.0 bits (79), Expect = 0.40
 Identities = 63/288 (21%), Positives = 83/288 (28%), Gaps = 42/288 (14%)

Query: 134  TNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTF 193
            T    +PP P    + PP +  P +  A P  P         +   TT            
Sbjct: 1150 TTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGL 1209

Query: 194  QQPPKPQSPALDNAVMAQVQA--ITAQLKTTPTQPSEQKA------AFPPPEQKTAFDKK 245
              P    +P    A     +    T   K  PT P+          A PPP+        
Sbjct: 1210 ATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPT---- 1265

Query: 246  LLDRFDYDDEPEAVEESKK-----------EDTTAVTTTAPA---AAVPPAPTATVPAAA 291
                      P A   S K            +   VT  +P    A  PP    T PAA 
Sbjct: 1266 ---------PPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAAT 1316

Query: 292  APAAASPPPPQAPFGFP-GDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQM 350
             P+    P    P G P    +  P+      +    P   G    P   + P PP    
Sbjct: 1317 PPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATP 1376

Query: 351  PGFGLLPTPPFPPMAQPVIP-----PTPPVQQPFQASFQAQNEPLTQK 393
               G     P  P   P IP     PT P   P     +A   P+T++
Sbjct: 1377 SHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPK-KAPATPVTRE 1423



 Score = 34.7 bits (78), Expect = 0.53
 Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 39/236 (16%)

Query: 656 VPAPITVPPPQVPPHQPGPPVVGALQPPA----FTPPLGIPPPGFGPGVPPPPPPPPFLR 711
           +P   T   P      P P    A+ P +     T  LG P    GP +PPP  P P   
Sbjct: 1   MPGEATETVPATEQELPQPQAETAVLPMSSALSVTAALGQP----GPTLPPPCSPAPQQC 56

Query: 712 PGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIP 771
           P        P    P P    + P+ +P P +             +  T   L      P
Sbjct: 57  PLSAANQASPF---PSPSTIASTPLEVPFPQS-------------SSGTALPLGTAPEAP 100

Query: 772 TVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLL-----GTQGVAPGPVIG 826
           T +    G   S  ++ +   A P  APT   TP  + P++L+       Q  +  P   
Sbjct: 101 TFLPNLIGPPISPAALAL---ASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNL 157

Query: 827 LQAPSTGLLGARPGLIPLQRP--PGMPPPHLQRFP--LMP-PR--PMPPHMMHRGP 875
           L +P +  +     +I L  P  P  P  +L + P  ++P P+  P PP ++   P
Sbjct: 158 LTSPPSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKGTPSPPCIVSTVP 213


>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
          Length = 411

 Score = 97.4 bits (241), Expect = 7e-20
 Identities = 91/286 (31%), Positives = 114/286 (39%), Gaps = 60/286 (20%)

Query: 640 VSPIPKPLPVPVP---PIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGF 696
           +SP P P+P P+P    IP P P ++P P   P Q   P+   +  P  + P+ IP P  
Sbjct: 92  LSPGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGP-ISGPVQIPGPFR 150

Query: 697 GPGVPPPPPPPPFLRPGFNPMHLP-PGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAG 755
           GP   P   P P   P   P   P PG +P   P PI  P+S P P   PIS+P      
Sbjct: 151 GPIPGPISGPAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISGPIPG--PISVP------ 202

Query: 756 INEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTP-PVTQPVSLL 814
                     I  PIP  +SG                  P + P   P P P+  P+S  
Sbjct: 203 ----------IPGPIPGPISG------------------PISGPNPGPIPGPIPGPIS-- 232

Query: 815 GTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRG 874
              G  PGP+ G       + G  PGLIP   P  +  P     P++ P P P  +   G
Sbjct: 233 ---GPNPGPIPG------PISGPNPGLIPGPIPGPISGPG----PIIGPIPSPAQIPGPG 279

Query: 875 PPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLG---GPGPGPG 917
              GPG    P      G  P   P + PG  PG G    P PGPG
Sbjct: 280 RLQGPGPILSPGRMRSPGSLPGLAPILGPGSGPGSGSVPAPIPGPG 325



 Score = 91.3 bits (225), Expect = 5e-18
 Identities = 103/337 (30%), Positives = 124/337 (36%), Gaps = 87/337 (25%)

Query: 643 IPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPP 702
           IP  L     PIP P P    P Q+P   PG                 IP P  GP   P
Sbjct: 88  IPAALSPGPGPIPAPIP---GPAQIPGPLPG----------------SIPGPIPGPAQIP 128

Query: 703 PPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPN-STIAGINEDTT 761
            P P P   P   P+ +P  F  P  P PI+ P  IP P + P S PN   I G N    
Sbjct: 129 SPIPAPIPGPISGPVQIPGPFRGP-IPGPISGPAPIPGPISGPFSGPNPGPIPGPNP--- 184

Query: 762 KDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTP-PVTQPVS--LLG-TQ 817
                  PIP  +SG                  P   P ++P P P+  P+S  + G   
Sbjct: 185 ------GPIPGPISG------------------PIPGPISVPIPGPIPGPISGPISGPNP 220

Query: 818 GVAPGPVIG-LQAPSTG-----LLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMM 871
           G  PGP+ G +  P+ G     + G  PGLIP   P  +  P     P++ P P P  + 
Sbjct: 221 GPIPGPIPGPISGPNPGPIPGPISGPNPGLIPGPIPGPISGPG----PIIGPIPSPAQI- 275

Query: 872 HRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLG---GPGPGPGGPEDRDGRQQP 928
                PGPG    P      GP    G    PG +PGL    GPG GPG           
Sbjct: 276 -----PGPGRLQGP------GPILSPGRMRSPGSLPGLAPILGPGSGPGS---------- 314

Query: 929 PQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQP 965
              P   P P +   P     Q P  S   P TQ  P
Sbjct: 315 GSVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFP 351



 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 58/206 (28%), Positives = 71/206 (34%), Gaps = 21/206 (10%)

Query: 771 PTVVSGARGN-AESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQA 829
           P  V G RG  A +   V    ++ P   P+ +   P  +P ++        GP    Q 
Sbjct: 30  PQRVPGQRGRGARAAPLVPAASASAPQRGPSGIL--PAAEP-TICSLHQAWGGPGCRAQK 86

Query: 830 PSTGLLGARPGLIPLQRP---------PGMPP---PHLQRFPLMPPRPMPPHMMHRGPPP 877
                L   PG IP   P         PG  P   P   + P   P P+P  +   GP  
Sbjct: 87  GIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPIS--GPVQ 144

Query: 878 GPGGFAMPPPHGMKGPFPPHGPFVRP--GGMPG-LGGPGPGPGGPEDRDGRQQPPQQPQQ 934
            PG F  P P  + GP P  GP   P  G  PG + GP PGP           P   P  
Sbjct: 145 IPGPFRGPIPGPISGPAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISGPIPGPISVPIP 204

Query: 935 QPQPQAPQQPQQQQQQQPPPSQQPPP 960
            P P     P       P P   P P
Sbjct: 205 GPIPGPISGPISGPNPGPIPGPIPGP 230


>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
           preproprotein [Homo sapiens]
          Length = 331

 Score = 95.5 bits (236), Expect = 3e-19
 Identities = 107/360 (29%), Positives = 122/360 (33%), Gaps = 68/360 (18%)

Query: 625 EVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPA 684
           +V+Q          P  P P+    P  P P P     PPPQ      GPP  G  Q P 
Sbjct: 22  DVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP- 80

Query: 685 FTPPLGIPP--PGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI-TPPVSIPPP 741
             PP G     P   PG P  PPP    +P   P   PP   P GPPP     P   PPP
Sbjct: 81  --PPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPP---PPPGKPQGPPPQGGNRPQGPPPP 135

Query: 742 HTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTN 801
             P                                 +G    GD  +   S  PP  P  
Sbjct: 136 GKP---------------------------------QGPPPQGDKSRSPRS--PPGKPQG 160

Query: 802 LPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARP-GLIPLQRPPGMPPP----HLQ 856
            P     QP      QG  P P      P  G  G +P G  P  +P G PP        
Sbjct: 161 PPPQGGNQP------QGPPPPPGKPQGPPPQG--GKKPQGPPPPGKPQGPPPQGDKSRSS 212

Query: 857 RFPLMPPRPMPPH--MMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGG--- 911
           + P   P+  PP      +GPPP PG    PPP G   P  P  P  +P G P  GG   
Sbjct: 213 QSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG-KPQGPPAQGGSKS 271

Query: 912 -----PGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQ 966
                P   P GP  ++G       P     PQ PQ P   Q Q PP   Q     + PQ
Sbjct: 272 QSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPPQ 331



 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 92/302 (30%), Positives = 104/302 (34%), Gaps = 58/302 (19%)

Query: 682 PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPP 741
           P     P G PPP   PG P  PPP    + G  P   PP   P GPPP      S   P
Sbjct: 41  PQGGNKPQGPPPP---PGKPQGPPP----QGGNKPQGPPPPGKPQGPPPQGDKSRS---P 90

Query: 742 HTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTN 801
            +PP         G N+        G P      G  GN   G          PP  P  
Sbjct: 91  RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG--GNRPQGPP--------PPGKPQG 140

Query: 802 LPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLM 861
            P P   +  S     G   GP      P  G            +P G PPP     P  
Sbjct: 141 -PPPQGDKSRSPRSPPGKPQGP-----PPQGG-----------NQPQGPPPP-----PGK 178

Query: 862 PPRPMPPHMMHRGPPPGPGGFAMPPPHGMKG------PFPPHGPFVRPGGMPGLGGPGPG 915
           P  P P        PP PG    PPP G K       P  P GP  + G  P   GP P 
Sbjct: 179 PQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQ--GPPPP 236

Query: 916 PGGPEDRDGRQQPPQ---QPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDN 972
           PG P+       PPQ   +PQ  P P  PQ P  Q   +   ++ PP   Q P Q   +N
Sbjct: 237 PGKPQG-----PPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNN 291

Query: 973 RQ 974
            Q
Sbjct: 292 PQ 293



 Score = 78.6 bits (192), Expect = 3e-14
 Identities = 98/346 (28%), Positives = 113/346 (32%), Gaps = 90/346 (26%)

Query: 613 PDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQP 672
           P   G P+ P  +  ++    +   +P  P P+    P  P P P     PPPQ      
Sbjct: 71  PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQ 130

Query: 673 GPPVVGALQPPAFTPPLG--IPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPP 730
           GPP  G  Q P   PP G     P   PG P  PPP    +P   P   PP   P GPPP
Sbjct: 131 GPPPPGKPQGP---PPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPP---PPPGKPQGPPP 184

Query: 731 PITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMY 790
                   PPP   P                                +G    GD  K  
Sbjct: 185 QGGKKPQGPPPPGKP--------------------------------QGPPPQGD--KSR 210

Query: 791 GSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGM 850
            S  PP  P   P     QP      QG  P P                      +P G 
Sbjct: 211 SSQSPPGKPQGPPPQGGNQP------QGPPPPP---------------------GKPQG- 242

Query: 851 PPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLG 910
           PPP     P  PP P  P    +GPP   G  +         P  P GP  + G  P   
Sbjct: 243 PPPQGGNKPQGPPPPGKP----QGPPAQGGSKSQ---SARSPPGKPQGPPQQEGNNP--Q 293

Query: 911 GPGPGPGGPEDRDGRQQPPQQPQQQP--QPQAPQQPQQQQQQQPPP 954
           GP P  GG          PQQPQ  P  QPQ P +P Q  +   PP
Sbjct: 294 GPPPPAGG---------NPQQPQAPPAGQPQGPPRPPQGGRPSRPP 330



 Score = 74.3 bits (181), Expect = 6e-13
 Identities = 73/233 (31%), Positives = 93/233 (39%), Gaps = 32/233 (13%)

Query: 751 STIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQP 810
           S+   +NED +++ S     P++++G           K  G   PP  P   P     +P
Sbjct: 14  SSAQNLNEDVSQEES-----PSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKP 68

Query: 811 VSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPM---- 866
                 QG  P P    Q P      +R    P  +P G PPP     P  PP P     
Sbjct: 69  ------QG--PPPPGKPQGPPPQGDKSRSPRSPPGKPQG-PPPQGGNQPQGPPPPPGKPQ 119

Query: 867 --PPHMMHR--GPPPGPGGFAMPPPHGMKG------PFPPHGPFVRPGGMPGLGGPGPG- 915
             PP   +R  GPPP PG    PPP G K       P  P GP  + G  P    P PG 
Sbjct: 120 GPPPQGGNRPQGPPP-PGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGK 178

Query: 916 PGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQ--QQPQ 966
           P GP  + G++     P  +PQ   PQ  + +  Q PP   Q PP Q   QPQ
Sbjct: 179 PQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQ 231



 Score = 74.3 bits (181), Expect = 6e-13
 Identities = 94/298 (31%), Positives = 103/298 (34%), Gaps = 91/298 (30%)

Query: 688 PLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPP--GFLPPGPPPPITPPVSIPPPHTPP 745
           P G  P G   G  P  PPPP   PG  P   PP  G  P GPPPP  P    PPP    
Sbjct: 36  PQGPSPQG---GNKPQGPPPP---PG-KPQGPPPQGGNKPQGPPPPGKPQG--PPPQGDK 86

Query: 746 ISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTP 805
              P S                                           PP  P   P  
Sbjct: 87  SRSPRS-------------------------------------------PPGKPQGPPPQ 103

Query: 806 PVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARP-GLIPLQRPPGMPPP-HLQRFPLMPP 863
              QP      QG  P P      P  G  G RP G  P  +P G PP     R P  PP
Sbjct: 104 GGNQP------QGPPPPPGKPQGPPPQG--GNRPQGPPPPGKPQGPPPQGDKSRSPRSPP 155

Query: 864 -RPMPPHMMH----RGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGP-GPGPG 917
            +P  P        +GPPP PG    PPP G K          +P G P  G P GP P 
Sbjct: 156 GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGK----------KPQGPPPPGKPQGPPPQ 205

Query: 918 GPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQ 975
           G + R   Q PP +PQ  P       PQ   Q Q PP   PPP + Q    +  N+ Q
Sbjct: 206 GDKSRSS-QSPPGKPQGPP-------PQGGNQPQGPP---PPPGKPQGPPPQGGNKPQ 252



 Score = 48.1 bits (113), Expect = 5e-05
 Identities = 59/247 (23%), Positives = 72/247 (29%), Gaps = 25/247 (10%)

Query: 128 PVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQ 187
           P  +     +G PPPP K    PP        P  P  P               QG + +
Sbjct: 100 PPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPP----------PQGDKSR 149

Query: 188 QILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLL 247
                   P KPQ P        Q           P     +K   PPP  K        
Sbjct: 150 S---PRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQG 206

Query: 248 DRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGF 307
           D+      P    +             P    PP      P         PPPP  P G 
Sbjct: 207 DKSRSSQSPPGKPQGPPPQGGNQPQGPPP---PPGKPQGPPPQGGNKPQGPPPPGKPQGP 263

Query: 308 PGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQP 367
           P  G  +   +Q       +P+    QQ+  + Q P PP G  P       P  PP  QP
Sbjct: 264 PAQGGSK---SQSARSPPGKPQGPP-QQEGNNPQGPPPPAGGNP-----QQPQAPPAGQP 314

Query: 368 VIPPTPP 374
             PP PP
Sbjct: 315 QGPPRPP 321



 Score = 43.9 bits (102), Expect = 9e-04
 Identities = 62/254 (24%), Positives = 76/254 (29%), Gaps = 15/254 (5%)

Query: 135 NNEGSPPPPVKVSSEPPT---QATPNSVPAVPQLP---SSDAFAAVAQLFQTTQGQQLQQ 188
           N    PPPP K    PP      +P S P  PQ P     +            QG   Q 
Sbjct: 66  NKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG 125

Query: 189 ILQTFQQPP--KPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKL 246
             +    PP  KPQ P          ++   + +  P Q   Q    PPP  K       
Sbjct: 126 GNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 185

Query: 247 LDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPA-PTATVPAAAAPAAASPPPPQAPF 305
             +      P      K +        + ++  PP  P    P         PPPP  P 
Sbjct: 186 GGKKPQGPPPPG----KPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 241

Query: 306 GFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMA 365
           G P  G  +P         Q  P   G +        P  P G     G  P  P PP  
Sbjct: 242 GPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSP-PGKPQGPPQQEGNNPQGPPPPAG 300

Query: 366 -QPVIPPTPPVQQP 378
             P  P  PP  QP
Sbjct: 301 GNPQQPQAPPAGQP 314



 Score = 37.7 bits (86), Expect = 0.062
 Identities = 31/118 (26%), Positives = 41/118 (34%), Gaps = 5/118 (4%)

Query: 261 ESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQH 320
           ++  ED +   + +  A  P  P+   P         PPPP  P G P  G  +P     
Sbjct: 17  QNLNEDVSQEESPSLIAGNPQGPS---PQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPP 73

Query: 321 QNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQP 378
               Q  P      + P     P  P G  P  G  P  P PP  +P  PP     +P
Sbjct: 74  PGKPQGPPPQGDKSRSP--RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRP 129


>gi|150417989 cyclin K isoform 1 [Homo sapiens]
          Length = 580

 Score = 94.0 bits (232), Expect = 7e-19
 Identities = 94/312 (30%), Positives = 124/312 (39%), Gaps = 41/312 (13%)

Query: 613 PDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQV-PPHQ 671
           P     P +P+ +  Q    +    +P     KP P P  P  V   + V P +     +
Sbjct: 293 PSQSSEPSQPQQKDPQQPAQQQ---QPAQQPKKPSPQPSSPRQVKRAVVVSPKEENKAAE 349

Query: 672 PGPPVVGALQ------PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLP 725
           P PP +  ++      PPA  PP   PP     G   PP P          + +PP   P
Sbjct: 350 PPPPKIPKIETTHPPLPPAHPPPDRKPPLAAALGEAEPPGPVD--ATDLPKVQIPP---P 404

Query: 726 PGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGD 785
             P P   PP   P PH PP   P+S + G++  TT     G    ++ S  +    S  
Sbjct: 405 AHPAPVHQPP---PLPHRPPPPPPSSYMTGMS--TTSSYMSGEGYQSLQSMMKTEGPS-- 457

Query: 786 SVKMYGSAVPPA--APTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIP 843
               YG A+PPA   P +LP  P   P +        P P      P++    A P   P
Sbjct: 458 ----YG-ALPPAYGPPAHLPYHPHVYPPN--------PPPPPVPPPPASFPPPAIPPPTP 504

Query: 844 LQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPG--GFAMPPPHGMKGPFPPHGPFV 901
              PP  PP +   FP  PPR  P H +   PPPG G    + PPP    G  PP  P +
Sbjct: 505 GYPPP--PPTYNPNFPPPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPPPI 562

Query: 902 RPGGMPGLGGPG 913
            P GMP +GG G
Sbjct: 563 PPPGMPPVGGLG 574



 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 91/370 (24%), Positives = 114/370 (30%), Gaps = 111/370 (30%)

Query: 625 EVAQNGGAETSHTEPVSPIPKPLPVPVPPIPV-----PAPITVP--PPQVPPHQPGPPVV 677
           ++   G  +  H  P      P   P P +P      P+  + P  P Q  P QP     
Sbjct: 256 DLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQ 315

Query: 678 GALQPPAFTPPLGIP----------PPGFGPGVPPPPPPPPFLR---PGFNPMHLPPGFL 724
            A QP   +P    P          P        PPPP  P +    P   P H PP   
Sbjct: 316 PAQQPKKPSPQPSSPRQVKRAVVVSPKEENKAAEPPPPKIPKIETTHPPLPPAHPPPDRK 375

Query: 725 PP--------GPPPPIT----PPVSIPPP-HTPPISIPNSTIAGINEDTTKDLSIGNPIP 771
           PP         PP P+     P V IPPP H  P+  P                   P+P
Sbjct: 376 PPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPP------------------PLP 417

Query: 772 TVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPS 831
                                  PP  P++  T   T    + G    +   ++  + PS
Sbjct: 418 --------------------HRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPS 457

Query: 832 TGLLGARPGLIPLQRPPGM-PPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGM 890
            G L           PP   PP HL         P  PH+    PPP P    +PPP   
Sbjct: 458 YGAL-----------PPAYGPPAHL---------PYHPHVYPPNPPPPP----VPPP--- 490

Query: 891 KGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQ 950
              FPP          P +  P PG   P        PP  P+  P    P  P      
Sbjct: 491 PASFPP----------PAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPPPGLGL 540

Query: 951 QPPPSQQPPP 960
             PP+  PPP
Sbjct: 541 --PPASYPPP 548



 Score = 55.1 bits (131), Expect = 4e-07
 Identities = 73/310 (23%), Positives = 94/310 (30%), Gaps = 61/310 (19%)

Query: 678 GALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVS 737
           G  Q P  TP     PP   P   P  P     +P  +     P    P  P     P  
Sbjct: 261 GKQQMPHHTPHQLQQPPSLQP--TPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQ 318

Query: 738 IPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPA 797
            P   +P  S P      +     ++     P P  +            ++     +PPA
Sbjct: 319 QPKKPSPQPSSPRQVKRAVVVSPKEENKAAEPPPPKIP----------KIETTHPPLPPA 368

Query: 798 APTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQR 857
            P     PP+   +     +   PGPV     P             +Q PP   P  + +
Sbjct: 369 HPPPDRKPPLAAALG----EAEPPGPVDATDLPK------------VQIPPPAHPAPVHQ 412

Query: 858 FPLMPPRPMPP--------------HMMHRG--------PPPGPGGFAMPPPHGMKGPFP 895
            P +P RP PP              +M   G           GP   A+PP +G     P
Sbjct: 413 PPPLPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPPAHLP 472

Query: 896 PHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPS 955
            H P V P   P    P P P  P        PP      P P  P  P       PPP 
Sbjct: 473 YH-PHVYPPNPP----PPPVPPPPASFPPPAIPP------PTPGYPPPPPTYNPNFPPPP 521

Query: 956 QQPPPTQQQP 965
            + PPT   P
Sbjct: 522 PRLPPTHAVP 531



 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 62/268 (23%), Positives = 86/268 (32%), Gaps = 55/268 (20%)

Query: 159 VPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPK----PQSPALDNAVMAQVQA 214
           V  VP     D    +  L+   + Q         QQPP     PQ P +  +  +Q   
Sbjct: 239 VQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSE 298

Query: 215 ITAQLKTTPTQPSEQKAAF-----PPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTA 269
            +   +  P QP++Q+        P P+  +    K        +E +A E    +    
Sbjct: 299 PSQPQQKDPQQPAQQQQPAQQPKKPSPQPSSPRQVKRAVVVSPKEENKAAEPPPPKIPKI 358

Query: 270 VTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPR 329
            TT  P     P P    P AAA   A PP P      P   +  PA+    +       
Sbjct: 359 ETTHPPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVH------- 411

Query: 330 MMGIQQDPMHHQVPLPP---------------------------NGQMPGFGLLPTP--- 359
               Q  P+ H+ P PP                             + P +G LP     
Sbjct: 412 ----QPPPLPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGP 467

Query: 360 ----PFPPMAQPVIPPTPPVQQPFQASF 383
               P+ P   P  PP PPV  P  ASF
Sbjct: 468 PAHLPYHPHVYPPNPPPPPVPPP-PASF 494



 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 66/264 (25%), Positives = 84/264 (31%), Gaps = 43/264 (16%)

Query: 127 APVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQL 186
           A V      N+ + PPP K+   P  + T   +P  P  P  D    +A      +    
Sbjct: 336 AVVVSPKEENKAAEPPPPKI---PKIETTHPPLP--PAHPPPDRKPPLAAALGEAE---- 386

Query: 187 QQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKL 246
                    PP P        V     A  A +   P  P       PPP          
Sbjct: 387 ---------PPGPVDATDLPKVQIPPPAHPAPVHQPPPLPHRPP---PPPPSSYMTGMST 434

Query: 247 LDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFG 306
              +   +  ++++   K +  +     PA   PPA     P    P    PP P  P  
Sbjct: 435 TSSYMSGEGYQSLQSMMKTEGPSYGALPPAYG-PPAHLPYHPHVYPPNPPPPPVPPPPAS 493

Query: 307 F-------PGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGL---- 355
           F       P  G   P  T + N     PR+      P H   P PP    PG GL    
Sbjct: 494 FPPPAIPPPTPGYPPPPPTYNPNFPPPPPRL-----PPTHAVPPHPP----PGLGLPPAS 544

Query: 356 LPTPPFPPMAQ-PVIPPTPPVQQP 378
            P P  PP  Q PV PP PP   P
Sbjct: 545 YPPPAVPPGGQPPVPPPIPPPGMP 568



 Score = 40.8 bits (94), Expect = 0.007
 Identities = 29/75 (38%), Positives = 32/75 (42%), Gaps = 14/75 (18%)

Query: 924 GRQQPP--------QQPQQQPQPQAPQQPQQQQQQQPPPSQ------QPPPTQQQPQQFR 969
           G+QQ P        Q P  QP PQ PQ  Q Q  Q   PSQ      Q P  QQQP Q  
Sbjct: 261 GKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP 320

Query: 970 NDNRQQFNSGRDQER 984
                Q +S R  +R
Sbjct: 321 KKPSPQPSSPRQVKR 335



 Score = 37.0 bits (84), Expect = 0.11
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 916 PGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQ 975
           P   + +  +   P QPQQ+     PQQP QQQQ    P+QQP     QP   R   R  
Sbjct: 286 PQVQQSQPSQSSEPSQPQQKD----PQQPAQQQQ----PAQQPKKPSPQPSSPRQVKRAV 337

Query: 976 FNSGRDQER 984
             S +++ +
Sbjct: 338 VVSPKEENK 346



 Score = 35.0 bits (79), Expect = 0.40
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 914 PGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQ-QPPPSQQPPPTQQQPQQFR 969
           P P  P+ +  +     +P Q PQ + PQQP QQQQ  Q P  ++P P    P+Q +
Sbjct: 281 PTPQVPQVQQSQPSQSSEPSQ-PQQKDPQQPAQQQQPAQQP--KKPSPQPSSPRQVK 334


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 90.5 bits (223), Expect = 8e-18
 Identities = 99/363 (27%), Positives = 129/363 (35%), Gaps = 70/363 (19%)

Query: 644 PKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQP-PAFTPPLGIPPPGFGPG--- 699
           P+    P  P P       PP   PP +   P +G L   P  TP    PP    P    
Sbjct: 254 PRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQ 313

Query: 700 -VPPPPPPPPFLRP---GFNPMHLPPGFLPPGP------PPPITPP-VSIPP---PHTPP 745
            +P PP  PP       G   +     FLP  P      PPP  PP +++PP   P +PP
Sbjct: 314 TLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPP 373

Query: 746 ISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTP 805
            S P S +A              P P          ++ +++ ++    P + P   P+P
Sbjct: 374 ASPPLSPLA-------------TPSP----------QAPNALAVHLLQAPFSPP---PSP 407

Query: 806 PVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFP---LMP 862
           PV  P S   +  V+P      QAP +  L A P  +P   PP  PP      P     P
Sbjct: 408 PVQAPFSPPASPPVSPSATPPSQAPPS--LAAPPLQVP-PSPPASPPMSPSATPPPQAPP 464

Query: 863 PRPMPPHMMHRGPPPGPGGFAMPPPHGMKGP---FPPHGPFVRPGGMPGLGGPGPGPGGP 919
           P   PP  + + PP  P   A PP   +  P   FP   PF     +P      P P  P
Sbjct: 465 PLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP 524

Query: 920 EDRDG-RQQPPQQPQQQPQPQAPQQPQQQQQQ----------------QPPPSQQPPPTQ 962
                   Q P  P   P  QAP++P                       PPPS+ P  T 
Sbjct: 525 PVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL 584

Query: 963 QQP 965
             P
Sbjct: 585 SGP 587



 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 96/344 (27%), Positives = 125/344 (36%), Gaps = 40/344 (11%)

Query: 642 PIPKPLPVPVPPIPVPA---PITVPPPQVPPH--QPGPPVVGALQPPAFTPPLGIPPPGF 696
           P  + L     P+  PA   P     P+ P H  QP P  + AL+PP  TPP     P  
Sbjct: 228 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 287

Query: 697 GPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGI 756
           GP    P   P                 P  PP P  PP S+    +PP + P+     +
Sbjct: 288 GPLSSSPLATPS----------------PSAPPSPSAPP-SLQTLPSPPATPPSQATTSL 330

Query: 757 NEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQP------ 810
              T +      P P +   A    ++  ++ +     PP+ P + P  P+  P      
Sbjct: 331 GSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPN 390

Query: 811 ---VSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPL-MPPRP- 865
              V LL     +P P   +QAP +    A P + P   PP   PP L   PL +PP P 
Sbjct: 391 ALAVHLLQAP-FSPPPSPPVQAPFSP--PASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 447

Query: 866 -MPPHMMHRGPPP-GPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRD 923
             PP      PPP  P   A PP    K P P   P +    +  L  P     G     
Sbjct: 448 ASPPMSPSATPPPQAPPPLAAPPLQLAKPP-PQAPPALATPPLQALPSPPASFPGQAPFS 506

Query: 924 GRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQ 967
                P  P   P PQAP         Q PPS    PT Q P++
Sbjct: 507 PSASLPMSPLATPPPQAP-PVLAAPLLQVPPSPPASPTLQAPRR 549



 Score = 87.0 bits (214), Expect = 9e-17
 Identities = 92/351 (26%), Positives = 125/351 (35%), Gaps = 51/351 (14%)

Query: 619 PKKPENEVAQNGGAETSH-TEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVV 677
           P  P ++   + G+ T   T    P P   P+  PP   P  + +PP Q PP  P  P +
Sbjct: 319 PATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPL 378

Query: 678 GALQPPAFTPPLGI----------PPPGFGPGVPPPPPPPPFLRPGFNP-------MHLP 720
             L  P+   P  +          PPP      P  PP  P + P   P       +  P
Sbjct: 379 SPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAP 438

Query: 721 PGFLPPGPP--PPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIG--NPIPTVVSG 776
           P  +PP PP  PP++P  + PP   PP++ P   +A         L+      +P+  + 
Sbjct: 439 PLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPAS 498

Query: 777 ARGNAESGDSVKMYGSAV---PPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTG 833
             G A    S  +  S +   PP AP  L  P +  P S   +  +          P T 
Sbjct: 499 FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTS 558

Query: 834 LLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMH--------RGPPPGP--GGFA 883
           + G R  L     PP  PPP       +    +  H           RG   GP  G  A
Sbjct: 559 VSGPRLTLALAPGPP--PPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAA 616

Query: 884 MPPPHG----------MKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDG 924
            PPP             +GP PP    +   G PG   P P   GP   DG
Sbjct: 617 SPPPDAELAACHPAAWSRGPAPP----LAFRGAPGAPLPWPPATGPGSADG 663



 Score = 77.8 bits (190), Expect = 5e-14
 Identities = 83/302 (27%), Positives = 98/302 (32%), Gaps = 46/302 (15%)

Query: 639 PVSPIPKP--LPVPVPPIPVPAPITVPPPQVPPHQPGPPVV--GALQPPAFTPPLGIPPP 694
           P SP   P   P   PP   P  +  PP QVPP  P  P +   A  PP   PPL  PP 
Sbjct: 412 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 471

Query: 695 GFGPGVPPPPPPPPFLRPGFNPMHLPPGFLP---PGPPPPITP--PVSIPPPHTPPI--- 746
                 PPP  PP    P    +  PP   P   P  P    P  P++ PPP  PP+   
Sbjct: 472 QLAK--PPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA 529

Query: 747 ---SIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLP 803
               +P S                 P    +   R     G    + G  +  A     P
Sbjct: 530 PLLQVPPSP----------------PASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPP 573

Query: 804 TPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPP 863
            PP   P S L    +A         P   L G   G  P       PPP  +     P 
Sbjct: 574 PPPSRSPSSTLSGPDLAGHSSSATSTPEE-LRGYDSG--PEGGAAASPPPDAELAACHPA 630

Query: 864 R----PMPPHMMHRGPP----PGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPG 915
                P PP +  RG P    P P         G+   +   GP       PG   PGP 
Sbjct: 631 AWSRGPAPP-LAFRGAPGAPLPWPPATGPGSADGLCTIYETEGP-ESATPAPGALDPGPS 688

Query: 916 PG 917
           PG
Sbjct: 689 PG 690



 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 87/320 (27%), Positives = 113/320 (35%), Gaps = 53/320 (16%)

Query: 639 PVSPIPKPLPVPVPPIPVPA-PITVPPPQVPPHQPGPPVVGALQPPAFTP---------- 687
           P+SP   P P   PP+  P   +  PPPQ PP    PP+     PPA  P          
Sbjct: 451 PMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS 510

Query: 688 ----PLGIPPPGFGPGVPPP----PPPPPFLRPGFNPMHLPPGFLPPGPPPPITPP---- 735
               PL  PPP   P +  P    PP PP   P       PP    PGP   ++ P    
Sbjct: 511 LPMSPLATPPPQAPPVLAAPLLQVPPSPP-ASPTLQAPRRPP---TPGPDTSVSGPRLTL 566

Query: 736 VSIPPPHTPPISIPNSTIAG--INEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSA 793
              P P  PP   P+ST++G  +   ++   S    +    SG  G A +        +A
Sbjct: 567 ALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAA 626

Query: 794 VPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPP 853
             PAA +  P PP+    +  G  G AP P      P+TG  G+  GL  +    G P  
Sbjct: 627 CHPAAWSRGPAPPL----AFRGAPG-APLP----WPPATGP-GSADGLCTIYETEG-PES 675

Query: 854 HLQRFPLMPPRPMPPHMMHRGPP-PGPGGFAMPPPHGMKGPFPPHG------------PF 900
                  + P P P     +     G G  +  P     G  P                 
Sbjct: 676 ATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTL 735

Query: 901 VRPGGMPGLGGPGPGPGGPE 920
           +        GG G GPGG E
Sbjct: 736 LLAAAEGAAGGSGGGPGGAE 755



 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 75/277 (27%), Positives = 98/277 (35%), Gaps = 38/277 (13%)

Query: 618 IPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGP-PV 676
           +P  P      +  A      P      PL +  PP   P  +  PP Q  P  P   P 
Sbjct: 442 VPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPG 501

Query: 677 VGALQPPAFTP--PLGIPPPGFGPGVPPP---PPPPPFLRPGFNPMHLPPGFLPPGPPPP 731
                P A  P  PL  PPP   P +  P    PP P   P       PP    PGP   
Sbjct: 502 QAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP---TPGPDTS 558

Query: 732 ITPP----VSIPPPHTPPISIPNSTIAG--INEDTTKDLSIGNPIPTVVSGARGNAESGD 785
           ++ P       P P  PP   P+ST++G  +   ++   S    +    SG  G A +  
Sbjct: 559 VSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASP 618

Query: 786 SVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQ 845
                 +A  PAA +  P P    P++  G  G AP P      P+TG  G+  GL  + 
Sbjct: 619 PPDAELAACHPAAWSRGPAP----PLAFRGAPG-APLP----WPPATG-PGSADGLCTIY 668

Query: 846 RPPGMPPPHLQRFPLMPPRPMP-PHMMHRGPPPGPGG 881
              G            P    P P  +  GP PG  G
Sbjct: 669 ETEG------------PESATPAPGALDPGPSPGTSG 693



 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 76/287 (26%), Positives = 107/287 (37%), Gaps = 51/287 (17%)

Query: 120 AAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQ 179
           A G  +++P+A   T +  +PP P    S PP+  T  S PA P  PS    +  +   Q
Sbjct: 286 ALGPLSSSPLA---TPSPSAPPSP----SAPPSLQTLPSPPATP--PSQATTSLGSPTLQ 336

Query: 180 TTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQK 239
            T        L     PP    PAL    +  +QA  +   + P  P     A P P+  
Sbjct: 337 ATHSFLPSPPLSPLATPPPQAPPAL---ALPPLQAPPSPPASPPLSP----LATPSPQAP 389

Query: 240 TAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPP 299
            A    LL    +   P    ++           +P A+ P +P+AT P+ A P+ A+PP
Sbjct: 390 NALAVHLLQA-PFSPPPSPPVQAP---------FSPPASPPVSPSATPPSQAPPSLAAPP 439

Query: 300 ----------PPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPP--- 346
                     PP +P   P      P       + +  P+       P    +P PP   
Sbjct: 440 LQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASF 499

Query: 347 NGQMP--GFGLLPTPPF---PPMAQPV-------IPPTPPVQQPFQA 381
            GQ P      LP  P    PP A PV       +PP+PP     QA
Sbjct: 500 PGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQA 546



 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 93/369 (25%), Positives = 114/369 (30%), Gaps = 72/369 (19%)

Query: 644 PKPLPVPVPPIPV-PAPITV-----PPPQVPPHQPGPPVVGALQP---PAFTPPLGIPPP 694
           P+P   P PP PV PA + V        + P  +    + GA  P   P   P     PP
Sbjct: 27  PRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSRPP 86

Query: 695 GFGPGVPPPPP----PPPFLRPGFNPMHLPPGFLPPGPPPP----ITPPVSIPPPHTPPI 746
             G G   PP     P P   PG        G   PGP       I+   ++        
Sbjct: 87  ASGRGERAPPAKNTSPGPVSSPG-----RASGTTRPGPLGQKGLRISAEETVARGKATEA 141

Query: 747 SIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPP 806
              ++  AG   DT+     G P P +   AR +  +G  V      +P  AP+  P PP
Sbjct: 142 PKRSALSAGARRDTSGPTP-GTPSPAM---ARRSRAAGTEV-----GLPRPAPSARPRPP 192

Query: 807 VTQP---VSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPP 863
              P   VS               + PS G  G       LQRP           PL  P
Sbjct: 193 TEGPRKSVSSASEHSTTEPSPAARRRPSAG--GG------LQRPASRSLSS-SATPLSSP 243

Query: 864 RPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLG------------G 911
               P    RG P  P   + P P G++   PP     R    P LG             
Sbjct: 244 ARSGPSA--RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPS 301

Query: 912 PGPGPGGPEDRDGRQQPPQQPQQQPQ---------------PQAPQQPQQQQQQQPPPSQ 956
             P P  P        PP  P  Q                 P  P  P      Q PP+ 
Sbjct: 302 APPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPAL 361

Query: 957 QPPPTQQQP 965
             PP Q  P
Sbjct: 362 ALPPLQAPP 370



 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 62/259 (23%), Positives = 80/259 (30%), Gaps = 41/259 (15%)

Query: 139 SPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPK 198
           S P P  + +  P Q TP    A P L    +                   LQT   PP 
Sbjct: 261 SQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPA 320

Query: 199 -PQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPE 257
            P S A  +     +QA  + L + P  P     A PPP+   A     L          
Sbjct: 321 TPPSQATTSLGSPTLQATHSFLPSPPLSP----LATPPPQAPPALALPPL---------- 366

Query: 258 AVEESKKEDTTAVTTTAPAAAVPPAPTA-TVPAAAAPAAASPPPP-QAPFGFPGDGMQQP 315
              ++      +   +  A   P AP A  V    AP +  P PP QAPF  P      P
Sbjct: 367 ---QAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 423

Query: 316 AYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPV 375
           + T                          PP+   P   + P+PP  P   P   P P  
Sbjct: 424 SATPPSQA---------------------PPSLAAPPLQVPPSPPASPPMSPSATPPPQA 462

Query: 376 QQPFQASFQAQNEPLTQKP 394
             P  A      +P  Q P
Sbjct: 463 PPPLAAPPLQLAKPPPQAP 481



 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 64/261 (24%), Positives = 82/261 (31%), Gaps = 31/261 (11%)

Query: 139 SPP--PPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQP 196
           SPP  PPV  S+ PP+QA P+      Q+P S   +       T   Q    +     Q 
Sbjct: 414 SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQL 473

Query: 197 PKPQSPALDNAVMAQVQAITAQLKTTPTQ----PSEQ----KAAFPPPEQKTAFDKKLLD 248
            KP   A        +QA+ +   + P Q    PS        A PPP+        LL 
Sbjct: 474 AKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQ 533

Query: 249 RFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFP 308
                  P A          + T  AP     P P  +V       A +P PP  P   P
Sbjct: 534 ---VPPSPPA----------SPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP 580

Query: 309 GDGMQQPAYTQHQNMDQFQP-RMMGIQQDPMHHQVPLPPNG------QMPGFGLLPTPPF 361
              +  P    H +     P  + G    P       PP            +   P PP 
Sbjct: 581 SSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPL 640

Query: 362 PPMAQPVIP-PTPPVQQPFQA 381
                P  P P PP   P  A
Sbjct: 641 AFRGAPGAPLPWPPATGPGSA 661



 Score = 43.5 bits (101), Expect = 0.001
 Identities = 61/297 (20%), Positives = 100/297 (33%), Gaps = 61/297 (20%)

Query: 138 GSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPP 197
           G P P       PPT+    SV +  +  +++   A  +  + + G  LQ          
Sbjct: 179 GLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARR--RPSAGGGLQ---------- 226

Query: 198 KPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPE 257
           +P S +L ++       +++  ++ P+     +A   P + K    + L         P 
Sbjct: 227 RPASRSLSSSATP----LSSPARSGPSARGTPRAPAHPSQPKPKGLQAL--------RPP 274

Query: 258 AVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAAS-PPPPQAPFGFPGDGMQQPA 316
            V   +K+   A+   + +    P+P+A    +A P+  + P PP  P       +  P 
Sbjct: 275 QVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPT 334

Query: 317 YTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLP--TPPFPPMAQPVIP---- 370
               Q    F P        P    +  PP    P   L P   PP PP + P+ P    
Sbjct: 335 L---QATHSFLP-------SPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATP 384

Query: 371 --------------------PTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPCIQ 407
                               P+PPVQ PF         P    P Q    +  P +Q
Sbjct: 385 SPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQ 441



 Score = 37.0 bits (84), Expect = 0.11
 Identities = 68/280 (24%), Positives = 80/280 (28%), Gaps = 41/280 (14%)

Query: 716 PMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLS---IGNPIPT 772
           P    PG L P PP    P    PPP TP           +      + +    G  IP 
Sbjct: 17  PAARAPGLLTPRPPGSPRP----PPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPE 72

Query: 773 VVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPV-------- 824
               A     S       G   PPA   N    PV+ P    GT    PGP+        
Sbjct: 73  SAPRAGPTRTSRPPASGRGERAPPA--KNTSPGPVSSPGRASGT--TRPGPLGQKGLRIS 128

Query: 825 --------IGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQR------FPLMPPRPMPPHM 870
                      +AP    L A          PG P P + R        +  PRP  P  
Sbjct: 129 AEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRP-APSA 187

Query: 871 MHRGPPPGP-GGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPP 929
             R P  GP    +    H    P P      RP    GL  P                 
Sbjct: 188 RPRPPTEGPRKSVSSASEHSTTEPSP--AARRRPSAGGGLQRPASRSLSSSATPLSSPAR 245

Query: 930 QQPQQQPQPQAPQQPQQQQ----QQQPPPSQQPPPTQQQP 965
             P  +  P+AP  P Q +    Q   PP   PP     P
Sbjct: 246 SGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP 285


>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
            sapiens]
          Length = 1130

 Score = 90.5 bits (223), Expect = 8e-18
 Identities = 128/521 (24%), Positives = 190/521 (36%), Gaps = 134/521 (25%)

Query: 638  EPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGP-PVVGALQPPAFTPPLGIPPPGF 696
            +P+ P   P P PVPP   P+P   PP     H PGP P VG++ P A   P   P P  
Sbjct: 639  QPMGPTC-PTPAPVPPPEAPSPFRAPPF----HPPGPMPSVGSM-PSAGPMPSAGPMPSA 692

Query: 697  GPGVPPPPPPPPFLR-------PGFNPMHLPPGFLPPGPP-------------PPITPPV 736
            GP VP   P PP          PG   + +PP  LP GP              P  TPP 
Sbjct: 693  GP-VPSARPGPPTTANHLGLSVPGL--VSVPPRLLP-GPENHRAGSNEDPILAPSGTPPP 748

Query: 737  SIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPP 796
            +IPP  T    +P       +++   D+ I              ++S DSV +    +PP
Sbjct: 749  TIPPDETFGGRVPRPAFVHYDKEEASDVEISL-----------ESDSDDSVVIVPEGLPP 797

Query: 797  AAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRP---PGMPPP 853
                 LP PP +         G  P P+    AP TG   A P +   + P   P  P P
Sbjct: 798  -----LPPPPPS---------GATPPPI----AP-TGPPTASPPVPAKEEPEELPAAPGP 838

Query: 854  HLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPG 913
                   +PP P PP       PP PG   +PPP             + P G PG GGP 
Sbjct: 839  -------LPPPPPPP-------PPVPGPVTLPPPQ------------LVPEGTPGGGGP- 871

Query: 914  PGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNR 973
              P   ED           +++ + +  ++ ++++++           ++  ++   D  
Sbjct: 872  --PALEEDLTVININSSDEEEEEEEEEEEEEEEEEEE-----------EEDFEEEEEDEE 918

Query: 974  QQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEE 1033
            + F    ++E      F    E +        ++ D    +  E            ++E+
Sbjct: 919  EYFEEEEEEE----EEFEEEFEEEEGELEEEEEEEDEEEEEELE------------EVED 962

Query: 1034 RNRRSSGHRDRE--RDSRDRESRREKEEARGKEKPEVTDRAGGNKTVEPPISQVGNVDTA 1091
                ++G    E               E+  K +PE     G    VE P          
Sbjct: 963  LEFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVEEP---------G 1013

Query: 1092 SELEKGVSEAAVLKPSEELPAEATSSVEPEKDSGSAAEAPR 1132
            +E E+G   A  L P E LP++    VE E +S +A   P+
Sbjct: 1014 TEEERGADTAPTLAP-EALPSQ--GEVEREGESPAAGPPPQ 1051



 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 40/105 (38%), Positives = 48/105 (45%), Gaps = 15/105 (14%)

Query: 633 ETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVP--PHQPGPPVVGALQPPAFTPPLG 690
           E+   + V  +P+ LP P+PP P P+  T PPP  P  P    PPV    +P        
Sbjct: 781 ESDSDDSVVIVPEGLP-PLPP-PPPSGAT-PPPIAPTGPPTASPPVPAKEEPEEL----- 832

Query: 691 IPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPP 735
             P   GP  PPPPPPPP   P   P   PP  +P G P    PP
Sbjct: 833 --PAAPGPLPPPPPPPPPVPGPVTLP---PPQLVPEGTPGGGGPP 872



 Score = 47.8 bits (112), Expect = 6e-05
 Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 22/122 (18%)

Query: 586 YIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENE--------VAQNGGAETSHT 637
           ++ +DK +  ++E   E    DS  + P+  G+P  P           +A  G    S  
Sbjct: 765 FVHYDKEEASDVEISLESDSDDSVVIVPE--GLPPLPPPPPSGATPPPIAPTGPPTASPP 822

Query: 638 EPVSPIPKPLPV--------PVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPL 689
            P    P+ LP         P PP PVP P+T+PPPQ+ P   G P  G   PPA    L
Sbjct: 823 VPAKEEPEELPAAPGPLPPPPPPPPPVPGPVTLPPPQLVPE--GTP--GGGGPPALEEDL 878

Query: 690 GI 691
            +
Sbjct: 879 TV 880



 Score = 41.6 bits (96), Expect = 0.004
 Identities = 54/274 (19%), Positives = 99/274 (36%), Gaps = 24/274 (8%)

Query: 140  PPPPVKVS-SEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPK 198
            PPPPV    + PP Q  P   P     P+ +    V  +  + + ++ ++  +  ++  +
Sbjct: 845  PPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEEEEEEEE 904

Query: 199  PQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEA 258
             +    +     + +    +         E++  F   E+    + +L +  + +DE E 
Sbjct: 905  EEEEDFEEEEEDEEEYFEEE--------EEEEEEFE--EEFEEEEGELEEEEEEEDEEEE 954

Query: 259  VEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGM----QQ 314
             E  + ED    T         P P    PA   P +   PP   P   P  G+    ++
Sbjct: 955  EELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPES---PPKVQPEPEPEPGLLLEVEE 1011

Query: 315  PAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPP 374
            P   + +  D        +  + +  Q  +   G+ P  G  P P      +P  PPT  
Sbjct: 1012 PGTEEERGADTAPT----LAPEALPSQGEVEREGESPAAG--PPPQELVEEEPSAPPTLL 1065

Query: 375  VQQPFQASFQAQNEPLTQKPHQQEMEVEQPCIQE 408
             ++    S + Q  P T    + E E E   +QE
Sbjct: 1066 EEETEDGSDKVQPPPETPAEEEMETETEAEALQE 1099



 Score = 38.9 bits (89), Expect = 0.028
 Identities = 66/315 (20%), Positives = 102/315 (32%), Gaps = 56/315 (17%)

Query: 113 IQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFA 172
           + PL  M       APV          PPP        P    P  +P+V  +PS+    
Sbjct: 635 VPPLQPMGPTCPTPAPV----------PPPEAPSPFRAPPFHPPGPMPSVGSMPSAGPMP 684

Query: 173 AVAQLFQ------------TTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLK 220
           +   +              TT       +      PP+      ++   +    I A   
Sbjct: 685 SAGPMPSAGPVPSARPGPPTTANHLGLSVPGLVSVPPRLLPGPENHRAGSNEDPILAPSG 744

Query: 221 TTPTQ--PSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAA 278
           T P    P E      P      +DK         +E   VE S + D+       P   
Sbjct: 745 TPPPTIPPDETFGGRVPRPAFVHYDK---------EEASDVEISLESDSDDSVVIVPEG- 794

Query: 279 VPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPM 338
           +PP P         P + + PPP AP G P      PA        + +P  +     P+
Sbjct: 795 LPPLPPP-------PPSGATPPPIAPTGPPTASPPVPA--------KEEPEELPAAPGPL 839

Query: 339 HHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQP-----FQASFQAQNEPLTQK 393
               P PP   +PG   LP P   P   P     P +++        +S + + E   ++
Sbjct: 840 --PPPPPPPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEE 897

Query: 394 PHQQEMEVEQPCIQE 408
             ++E E E+   +E
Sbjct: 898 EEEEEEEEEEEDFEE 912



 Score = 38.1 bits (87), Expect = 0.048
 Identities = 32/139 (23%), Positives = 51/139 (36%), Gaps = 19/139 (13%)

Query: 851  PPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFA-MPPPHGMKGPFPPHGPFVRPGGMPGL 909
            PPP L   P +PP   PP +    P P PG    +  P   +       P + P  +P  
Sbjct: 978  PPPTLP--PALPPPESPPKVQPE-PEPEPGLLLEVEEPGTEEERGADTAPTLAPEALPSQ 1034

Query: 910  G-----GPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQ 964
            G     G  P  G          PP Q   + +P AP    +++ +      QPPP    
Sbjct: 1035 GEVEREGESPAAG----------PPPQELVEEEPSAPPTLLEEETEDGSDKVQPPPETPA 1084

Query: 965  PQQFRNDNRQQFNSGRDQE 983
             ++   +   +    ++Q+
Sbjct: 1085 EEEMETETEAEALQEKEQD 1103



 Score = 35.0 bits (79), Expect = 0.40
 Identities = 32/127 (25%), Positives = 43/127 (33%), Gaps = 35/127 (27%)

Query: 257 EAVEESKKEDTTAVTT-------TAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPG 309
           +A    ++ED+  V++       T  A   P  P         P  A  PPP+AP  F  
Sbjct: 603 QAFSLGQREDSLEVSSFCSEALVTCAALTHPRVPPLQPMGPTCPTPAPVPPPEAPSPF-- 660

Query: 310 DGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPV- 368
                                   +  P H   P+P  G MP  G +P+    P A PV 
Sbjct: 661 ------------------------RAPPFHPPGPMPSVGSMPSAGPMPSAGPMPSAGPVP 696

Query: 369 -IPPTPP 374
              P PP
Sbjct: 697 SARPGPP 703



 Score = 35.0 bits (79), Expect = 0.40
 Identities = 40/178 (22%), Positives = 61/178 (34%), Gaps = 33/178 (18%)

Query: 137  EGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQP 196
            EG+PPPP    + PP ++ P   P     P                      +L   ++P
Sbjct: 974  EGAPPPPTLPPALPPPESPPKVQPEPEPEPG---------------------LLLEVEEP 1012

Query: 197  PKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPP----EQKTAFDKKLLDR--F 250
               +    D A     +A+ +Q +    +  E  AA PPP    E++ +    LL+    
Sbjct: 1013 GTEEERGADTAPTLAPEALPSQGEV--EREGESPAAGPPPQELVEEEPSAPPTLLEEETE 1070

Query: 251  DYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAA----AAPAAASPPPPQAP 304
            D  D+ +   E+  E+     T A A             A      P    PPPP  P
Sbjct: 1071 DGSDKVQPPPETPAEEEMETETEAEALQEKEQDDTAAMLADFIDCPPDDEKPPPPTEP 1128



 Score = 33.5 bits (75), Expect = 1.2
 Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 13/113 (11%)

Query: 722  GFLPPGPPPPITPPVSIPPPHTPPISIPN-----STIAGINEDTTKDLSIGNPIPTVVSG 776
            G +  G PPP T P ++PPP +PP   P        +  + E  T++    +  PT+   
Sbjct: 970  GEVEEGAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVEEPGTEEERGADTAPTLAPE 1029

Query: 777  ARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLL------GTQGVAPGP 823
            A  +    +      +A PP  P  L     + P +LL      G+  V P P
Sbjct: 1030 ALPSQGEVEREGESPAAGPP--PQELVEEEPSAPPTLLEEETEDGSDKVQPPP 1080



 Score = 31.6 bits (70), Expect = 4.5
 Identities = 32/107 (29%), Positives = 34/107 (31%), Gaps = 44/107 (41%)

Query: 682  PPAFTPPLGIPPPGFGPGVPPPPPPPPFL-----RPGFNPMH-------LPPGFLP---- 725
            PP  T P  +PPP   P V P P P P L      PG            L P  LP    
Sbjct: 977  PPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVEEPGTEEERGADTAPTLAPEALPSQGE 1036

Query: 726  ---------PGPPP-------PITPPVSI------------PPPHTP 744
                      GPPP       P  PP  +            PPP TP
Sbjct: 1037 VEREGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDKVQPPPETP 1083


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 90.1 bits (222), Expect = 1e-17
 Identities = 101/358 (28%), Positives = 130/358 (36%), Gaps = 38/358 (10%)

Query: 642 PIPKPLPVPVPPIPVPA---PITVPPPQVPPH--QPGPPVVGALQPPAFTPPLGIPPPGF 696
           P  + L     P+  PA   P     P+ P H  QP P  + AL+PP  TPP     P  
Sbjct: 237 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 296

Query: 697 GP--GVPPPPPPPPFLRPGFNPMHLP------------PGFLPPGPPPPITPPVSIPPPH 742
           GP    P   P P        P  LP               LP  PP P  PP S+    
Sbjct: 297 GPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPP-SLQTLP 355

Query: 743 TPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNL 802
           +PP + P+     +   T +      P P +   A    ++  ++ +     PP+ P + 
Sbjct: 356 SPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASP 415

Query: 803 PTPPVTQP---------VSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPP 853
           P  P+  P         V LL     +P P   +QAP +    A P + P   PP   PP
Sbjct: 416 PLSPLATPSPQAPNALAVHLLQAP-FSPPPSPPVQAPFSP--PASPPVSPSATPPSQAPP 472

Query: 854 HLQRFPL-MPPRP--MPPHMMHRGPPP-GPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGL 909
            L   PL +PP P   PP      PPP  P   A PP    K P P   P +    +  L
Sbjct: 473 SLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPP-PQAPPALATPPLQAL 531

Query: 910 GGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQ 967
             P     G          P  P   P PQAP         Q PPS    PT Q P++
Sbjct: 532 PSPPASFPGQAPFSPSASLPMSPLATPPPQAP-PVLAAPLLQVPPSPPASPTLQAPRR 588



 Score = 89.4 bits (220), Expect = 2e-17
 Identities = 95/354 (26%), Positives = 123/354 (34%), Gaps = 71/354 (20%)

Query: 641 SPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPP------LGIPPP 694
           S  P  LP       +   +  P P  PP    PP +  L  P  TPP      LG P  
Sbjct: 315 SQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTL 374

Query: 695 GFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIA 754
                  P PP         +P+  PP   P  PP    PP+  PP  +PP S P S +A
Sbjct: 375 QATHSFLPSPP--------LSPLATPP---PQAPPALALPPLQAPP--SPPASPPLSPLA 421

Query: 755 GINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLL 814
                         P P          ++ +++ ++    P + P   P+PPV  P S  
Sbjct: 422 -------------TPSP----------QAPNALAVHLLQAPFSPP---PSPPVQAPFSPP 455

Query: 815 GTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFP---LMPPRPMPPHMM 871
            +  V+P      QAP +  L A P  +P   PP  PP      P     PP   PP  +
Sbjct: 456 ASPPVSPSATPPSQAPPS--LAAPPLQVP-PSPPASPPMSPSATPPPQAPPPLAAPPLQL 512

Query: 872 HRGPPPGPGGFAMPPPHGMKGP---FPPHGPFVRPGGMPGLGGPGPGPGGPEDRDG-RQQ 927
            + PP  P   A PP   +  P   FP   PF     +P      P P  P        Q
Sbjct: 513 AKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQ 572

Query: 928 PPQQPQQQPQPQAPQQPQQQQQQ----------------QPPPSQQPPPTQQQP 965
            P  P   P  QAP++P                       PPPS+ P  T   P
Sbjct: 573 VPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGP 626



 Score = 87.0 bits (214), Expect = 9e-17
 Identities = 92/351 (26%), Positives = 125/351 (35%), Gaps = 51/351 (14%)

Query: 619 PKKPENEVAQNGGAETSH-TEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVV 677
           P  P ++   + G+ T   T    P P   P+  PP   P  + +PP Q PP  P  P +
Sbjct: 358 PATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPL 417

Query: 678 GALQPPAFTPPLGI----------PPPGFGPGVPPPPPPPPFLRPGFNP-------MHLP 720
             L  P+   P  +          PPP      P  PP  P + P   P       +  P
Sbjct: 418 SPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAP 477

Query: 721 PGFLPPGPP--PPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIG--NPIPTVVSG 776
           P  +PP PP  PP++P  + PP   PP++ P   +A         L+      +P+  + 
Sbjct: 478 PLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPAS 537

Query: 777 ARGNAESGDSVKMYGSAV---PPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTG 833
             G A    S  +  S +   PP AP  L  P +  P S   +  +          P T 
Sbjct: 538 FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTS 597

Query: 834 LLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMH--------RGPPPGP--GGFA 883
           + G R  L     PP  PPP       +    +  H           RG   GP  G  A
Sbjct: 598 VSGPRLTLALAPGPP--PPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAA 655

Query: 884 MPPPHG----------MKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDG 924
            PPP             +GP PP    +   G PG   P P   GP   DG
Sbjct: 656 SPPPDAELAACHPAAWSRGPAPP----LAFRGAPGAPLPWPPATGPGSADG 702



 Score = 77.8 bits (190), Expect = 5e-14
 Identities = 83/302 (27%), Positives = 98/302 (32%), Gaps = 46/302 (15%)

Query: 639 PVSPIPKP--LPVPVPPIPVPAPITVPPPQVPPHQPGPPVV--GALQPPAFTPPLGIPPP 694
           P SP   P   P   PP   P  +  PP QVPP  P  P +   A  PP   PPL  PP 
Sbjct: 451 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 510

Query: 695 GFGPGVPPPPPPPPFLRPGFNPMHLPPGFLP---PGPPPPITP--PVSIPPPHTPPI--- 746
                 PPP  PP    P    +  PP   P   P  P    P  P++ PPP  PP+   
Sbjct: 511 QLAK--PPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA 568

Query: 747 ---SIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLP 803
               +P S                 P    +   R     G    + G  +  A     P
Sbjct: 569 PLLQVPPSP----------------PASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPP 612

Query: 804 TPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPP 863
            PP   P S L    +A         P   L G   G  P       PPP  +     P 
Sbjct: 613 PPPSRSPSSTLSGPDLAGHSSSATSTPEE-LRGYDSG--PEGGAAASPPPDAELAACHPA 669

Query: 864 R----PMPPHMMHRGPP----PGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPG 915
                P PP +  RG P    P P         G+   +   GP       PG   PGP 
Sbjct: 670 AWSRGPAPP-LAFRGAPGAPLPWPPATGPGSADGLCTIYETEGP-ESATPAPGALDPGPS 727

Query: 916 PG 917
           PG
Sbjct: 728 PG 729



 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 87/320 (27%), Positives = 113/320 (35%), Gaps = 53/320 (16%)

Query: 639 PVSPIPKPLPVPVPPIPVPA-PITVPPPQVPPHQPGPPVVGALQPPAFTP---------- 687
           P+SP   P P   PP+  P   +  PPPQ PP    PP+     PPA  P          
Sbjct: 490 PMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS 549

Query: 688 ----PLGIPPPGFGPGVPPP----PPPPPFLRPGFNPMHLPPGFLPPGPPPPITPP---- 735
               PL  PPP   P +  P    PP PP   P       PP    PGP   ++ P    
Sbjct: 550 LPMSPLATPPPQAPPVLAAPLLQVPPSPP-ASPTLQAPRRPP---TPGPDTSVSGPRLTL 605

Query: 736 VSIPPPHTPPISIPNSTIAG--INEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSA 793
              P P  PP   P+ST++G  +   ++   S    +    SG  G A +        +A
Sbjct: 606 ALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAA 665

Query: 794 VPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPP 853
             PAA +  P PP+    +  G  G AP P      P+TG  G+  GL  +    G P  
Sbjct: 666 CHPAAWSRGPAPPL----AFRGAPG-APLP----WPPATGP-GSADGLCTIYETEG-PES 714

Query: 854 HLQRFPLMPPRPMPPHMMHRGPP-PGPGGFAMPPPHGMKGPFPPHG------------PF 900
                  + P P P     +     G G  +  P     G  P                 
Sbjct: 715 ATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTL 774

Query: 901 VRPGGMPGLGGPGPGPGGPE 920
           +        GG G GPGG E
Sbjct: 775 LLAAAEGAAGGSGGGPGGAE 794



 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 75/277 (27%), Positives = 98/277 (35%), Gaps = 38/277 (13%)

Query: 618 IPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGP-PV 676
           +P  P      +  A      P      PL +  PP   P  +  PP Q  P  P   P 
Sbjct: 481 VPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPG 540

Query: 677 VGALQPPAFTP--PLGIPPPGFGPGVPPP---PPPPPFLRPGFNPMHLPPGFLPPGPPPP 731
                P A  P  PL  PPP   P +  P    PP P   P       PP    PGP   
Sbjct: 541 QAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP---TPGPDTS 597

Query: 732 ITPP----VSIPPPHTPPISIPNSTIAG--INEDTTKDLSIGNPIPTVVSGARGNAESGD 785
           ++ P       P P  PP   P+ST++G  +   ++   S    +    SG  G A +  
Sbjct: 598 VSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASP 657

Query: 786 SVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQ 845
                 +A  PAA +  P P    P++  G  G AP P      P+TG  G+  GL  + 
Sbjct: 658 PPDAELAACHPAAWSRGPAP----PLAFRGAPG-APLP----WPPATG-PGSADGLCTIY 707

Query: 846 RPPGMPPPHLQRFPLMPPRPMP-PHMMHRGPPPGPGG 881
              G            P    P P  +  GP PG  G
Sbjct: 708 ETEG------------PESATPAPGALDPGPSPGTSG 732



 Score = 61.2 bits (147), Expect = 5e-09
 Identities = 77/292 (26%), Positives = 106/292 (36%), Gaps = 45/292 (15%)

Query: 116 LLDMAAGTSNAAPVAENVTNNEGSPPPPVKVS-SEPPTQATPNSVPAVPQLPSSDAFAAV 174
           L   A  T  A P + ++T    +P P    S S PP+  T  S PA P  PS    +  
Sbjct: 313 LQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATP--PSQATTSLG 370

Query: 175 AQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFP 234
           +   Q T        L     PP    PAL    +  +QA  +   + P  P     A P
Sbjct: 371 SPTLQATHSFLPSPPLSPLATPPPQAPPAL---ALPPLQAPPSPPASPPLSP----LATP 423

Query: 235 PPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPA 294
            P+   A    LL    +   P    ++           +P A+ P +P+AT P+ A P+
Sbjct: 424 SPQAPNALAVHLLQA-PFSPPPSPPVQAP---------FSPPASPPVSPSATPPSQAPPS 473

Query: 295 AASPP----------PPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPL 344
            A+PP          PP +P   P      P       + +  P+       P    +P 
Sbjct: 474 LAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPS 533

Query: 345 PP---NGQMP--GFGLLPTPPF---PPMAQPV-------IPPTPPVQQPFQA 381
           PP    GQ P      LP  P    PP A PV       +PP+PP     QA
Sbjct: 534 PPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQA 585



 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 64/261 (24%), Positives = 82/261 (31%), Gaps = 31/261 (11%)

Query: 139 SPP--PPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQP 196
           SPP  PPV  S+ PP+QA P+      Q+P S   +       T   Q    +     Q 
Sbjct: 453 SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQL 512

Query: 197 PKPQSPALDNAVMAQVQAITAQLKTTPTQ----PSEQ----KAAFPPPEQKTAFDKKLLD 248
            KP   A        +QA+ +   + P Q    PS        A PPP+        LL 
Sbjct: 513 AKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQ 572

Query: 249 RFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFP 308
                  P A          + T  AP     P P  +V       A +P PP  P   P
Sbjct: 573 ---VPPSPPA----------SPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP 619

Query: 309 GDGMQQPAYTQHQNMDQFQP-RMMGIQQDPMHHQVPLPPNG------QMPGFGLLPTPPF 361
              +  P    H +     P  + G    P       PP            +   P PP 
Sbjct: 620 SSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPL 679

Query: 362 PPMAQPVIP-PTPPVQQPFQA 381
                P  P P PP   P  A
Sbjct: 680 AFRGAPGAPLPWPPATGPGSA 700



 Score = 43.1 bits (100), Expect = 0.001
 Identities = 68/303 (22%), Positives = 102/303 (33%), Gaps = 46/303 (15%)

Query: 123 TSNAAPV---AENVTNNEGSPPPPVKVSSEPPTQATPNSVPAV--PQL--PSSDAFAAVA 175
           +S+A P+   A +  +  G+P  P       P+Q  P  + A+  PQ+  P  DA  A+ 
Sbjct: 243 SSSATPLSSPARSGPSARGTPRAPAH-----PSQPKPKGLQALRPPQVTPPRKDAAPALG 297

Query: 176 QLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPP 235
            L  +             Q PP   +    +++  Q+         +P+ P   +    P
Sbjct: 298 PLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSP 357

Query: 236 PEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAA 295
           P                   P +   +     T   T +   + P +P AT P  A PA 
Sbjct: 358 PAT-----------------PPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPAL 400

Query: 296 ASPP---PPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPG 352
           A PP   PP  P   P   +  P+           P  + +         P  P  Q P 
Sbjct: 401 ALPPLQAPPSPPASPPLSPLATPSPQA--------PNALAVHLLQAPFSPPPSPPVQAP- 451

Query: 353 FGLLPTPPFPPMAQPV--IPPT---PPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPCIQ 407
           F    +PP  P A P    PP+   PP+Q P          P    P Q    +  P +Q
Sbjct: 452 FSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 511

Query: 408 EVK 410
             K
Sbjct: 512 LAK 514



 Score = 40.0 bits (92), Expect = 0.013
 Identities = 87/359 (24%), Positives = 105/359 (29%), Gaps = 82/359 (22%)

Query: 679 ALQPPAFTPPLGIPPPGFGPGVPPPPPP--PPFLR-------PGFNPMHLPPGFLP---- 725
           A  P A  P L  P P   PG P PPPP  P  LR        G  P+    G +     
Sbjct: 14  ARTPAARAPGLLTPRP---PGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70

Query: 726 PGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIG------------NPIPTV 773
           P   P   P  S       P S P ++  G      K+ S G             P P  
Sbjct: 71  PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLG 130

Query: 774 VSGARGNAE-------SGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIG 826
             G R +AE       + ++ K    +      T+ PTP    P   +  +  A G  +G
Sbjct: 131 QKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPA--MARRSRAAGTEVG 188

Query: 827 LQAPSTGLLGARPGLIP----------------------------LQRPPGMPPPHLQRF 858
           L  P+       P   P                            LQRP           
Sbjct: 189 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSS-SAT 247

Query: 859 PLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGP-- 916
           PL  P    P    RG P  P   + P P G++   PP     R    P LG     P  
Sbjct: 248 PLSSPARSGPSA--RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLA 305

Query: 917 -GGPEDRDGRQQPPQQPQ-----------QQPQPQAPQQPQQQQQQQPPPSQQPPPTQQ 963
              P      Q PP  P              P P AP  P      Q  PS    P  Q
Sbjct: 306 TPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQ 364



 Score = 36.2 bits (82), Expect = 0.18
 Identities = 70/285 (24%), Positives = 83/285 (29%), Gaps = 42/285 (14%)

Query: 716 PMHLPPGFLPPGPPPPITPPVSIPPPHTPPISI-------PNSTIAGINEDTTKDLSIGN 768
           P    PG L P PP    PP  + P     +         P +  AG     T   S   
Sbjct: 17  PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76

Query: 769 PIPTVVSGARG-NAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPV--- 824
             PT  +G    N  S       G   PPA   N    PV+ P    GT    PGP+   
Sbjct: 77  AGPTRSAGTSSRNPASRPPASGRGERAPPA--KNTSPGPVSSPGRASGT--TRPGPLGQK 132

Query: 825 -------------IGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQR------FPLMPPRP 865
                           +AP    L A          PG P P + R        +  PRP
Sbjct: 133 GLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRP 192

Query: 866 MPPHMMHRGPPPGP-GGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDG 924
             P    R P  GP    +    H    P P      RP    GL  P            
Sbjct: 193 -APSARPRPPTEGPRKSVSSASEHSTTEPSP--AARRRPSAGGGLQRPASRSLSSSATPL 249

Query: 925 RQQPPQQPQQQPQPQAPQQPQQQQ----QQQPPPSQQPPPTQQQP 965
                  P  +  P+AP  P Q +    Q   PP   PP     P
Sbjct: 250 SSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP 294


>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
          Length = 464

 Score = 90.1 bits (222), Expect = 1e-17
 Identities = 82/258 (31%), Positives = 103/258 (39%), Gaps = 25/258 (9%)

Query: 642 PIPKPLPVPVPPIPVPAPITV----PPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFG 697
           P P  LP   P +  P P  +    P P +P   P PP  G   PP   PP G P P   
Sbjct: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPM--PPTG-PAPSGP 274

Query: 698 PGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTI---- 753
           PG P  PPP P + P    +H P   + P P P + PP     P  P +  P S +    
Sbjct: 275 PGPPQLPPPAPGVHPPAPVVHPPASGVHP-PAPGVHPPAPGVHPPAPGVHPPTSGVHPPA 333

Query: 754 AGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSA-VPPAAPTNLPTPPVTQPVS 812
            G++        +  P P V   A G       V    SA V P AP   P  P   P  
Sbjct: 334 PGVHPPAP---GVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHP-Q 389

Query: 813 LLGTQGVAPG---PVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPH 869
             G    APG      G+     G+  + PG+ P  +PPG+ P +     + PP PMPP 
Sbjct: 390 APGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHP--QPPGVHPSNP---GVHPPTPMPPM 444

Query: 870 MMHRGPPPGPGGFAMPPP 887
           +    P  GPG    PPP
Sbjct: 445 LRPPLPSEGPGNIPPPPP 462



 Score = 79.0 bits (193), Expect = 2e-14
 Identities = 90/295 (30%), Positives = 105/295 (35%), Gaps = 54/295 (18%)

Query: 672 PGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPP 731
           P PP +     PA  P +  PPP    G+PP PP P  L P       PPG LP  P PP
Sbjct: 218 PAPPSL-----PAGPPGVKRPPPPLMNGLPPRPPLPESLPPP------PPGGLPLPPMPP 266

Query: 732 ITPPVSIPP--PHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKM 789
             P  S PP  P  PP +       G++           P P V   A G       V  
Sbjct: 267 TGPAPSGPPGPPQLPPPA------PGVHP----------PAPVVHPPASGVHPPAPGVH- 309

Query: 790 YGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPG 849
                PPA   + P P V  P     T GV P P  G+  P+ G+    PG+ P      
Sbjct: 310 -----PPAPGVHPPAPGVHPP-----TSGVHP-PAPGVHPPAPGVHPPAPGVHPPAPGVH 358

Query: 850 MPPPHLQRFPLMPPRPMPPHMMHRGP---PPGPGGFAMPPPHGMKGPFPPHGPFVRPGGM 906
            P P +   P     P  P +    P   P  PG    PP  GM    P   P   PG  
Sbjct: 359 PPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPG--VHPPAPGMHPQAPGVHP-QPPGVH 415

Query: 907 PGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPT 961
           P   G  P P G    +    P   P   P    P  P +     PP    PPPT
Sbjct: 416 PSAPGVHPQPPGVHPSNPGVHP---PTPMPPMLRPPLPSEGPGNIPP----PPPT 463



 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 67/223 (30%), Positives = 82/223 (36%), Gaps = 58/223 (26%)

Query: 618 IPKKPENEVAQNGGAETSHTEPVSP-IPKPLPVPVPP---IPVPAPITVPP-PQVPPHQP 672
           +P  P    A +G        P +P +  P PV  PP   +  PAP   PP P V P  P
Sbjct: 261 LPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAP 320

Query: 673 G---------PPVVGALQP-PAFTPPL-GIPPPGFG-----PGVPPPP-----PPPPFLR 711
           G         PP  G   P P   PP  G+ PP  G     PGV PPP     P  P + 
Sbjct: 321 GVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVH 380

Query: 712 PGFNPMH-LPPGFLPPGP------------PPPITPPVSIPPPHTPPISIPNSTIAGINE 758
           P    +H   PG  PP P            PP + P  S P  H  P  +  S   G++ 
Sbjct: 381 PAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHP--SAPGVHPQPPGVHPSN-PGVHP 437

Query: 759 DTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTN 801
            T     +  P+P   S   GN             +PP  PTN
Sbjct: 438 PTPMPPMLRPPLP---SEGPGN-------------IPPPPPTN 464



 Score = 48.5 bits (114), Expect = 4e-05
 Identities = 40/121 (33%), Positives = 44/121 (36%), Gaps = 32/121 (26%)

Query: 847 PPGM--PPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPG 904
           PPG+  PPP L     +PPRP  P  +   PPP PGG  +PP        PP GP     
Sbjct: 227 PPGVKRPPPPLMNG--LPPRPPLPESL---PPPPPGGLPLPP-------MPPTGP----- 269

Query: 905 GMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQ 964
                  P   PG P      Q PP  P   P P     P       P P   PP     
Sbjct: 270 ------APSGPPGPP------QLPPPAPGVHP-PAPVVHPPASGVHPPAPGVHPPAPGVH 316

Query: 965 P 965
           P
Sbjct: 317 P 317



 Score = 42.7 bits (99), Expect = 0.002
 Identities = 36/107 (33%), Positives = 44/107 (41%), Gaps = 11/107 (10%)

Query: 275 PAAAVPPAPTATV-PAAAAPAAASPPP-PQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMG 332
           PA  V P P+A V P A     A+P   PQAP      G+  PA   H       P+  G
Sbjct: 360 PAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAP------GVHPPAPGMHPQAPGVHPQPPG 413

Query: 333 IQQD-PMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQP 378
           +    P  H  P PP       G+ P  P PPM +P +P   P   P
Sbjct: 414 VHPSAPGVH--PQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIP 458



 Score = 40.8 bits (94), Expect = 0.007
 Identities = 41/137 (29%), Positives = 45/137 (32%), Gaps = 12/137 (8%)

Query: 273 TAPAAAVPPAPTATVPAAAA--PAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRM 330
           T PA + PP P    P A    P A    PP +    P  G+  PA   H       P  
Sbjct: 267 TGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPT 326

Query: 331 MGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQN--- 387
            G+   P    V  P  G  P     P P   P A  V PP P V  P  A    Q    
Sbjct: 327 SGVH--PPAPGVHPPAPGVHP-----PAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGV 379

Query: 388 EPLTQKPHQQEMEVEQP 404
            P     H Q   V  P
Sbjct: 380 HPAAPAVHPQAPGVHPP 396



 Score = 39.3 bits (90), Expect = 0.021
 Identities = 34/107 (31%), Positives = 41/107 (38%), Gaps = 9/107 (8%)

Query: 278 AVPPAPTATVPAA----AAPAAASPP-PPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMG 332
           ++PP P   +P        PA + PP PPQ P   P  G+  PA   H       P   G
Sbjct: 250 SLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPP--PAPGVHPPAPVVHPPASGVHPPAPG 307

Query: 333 IQQDPMHHQVPLPPNGQMPGFGL-LPTPPFPPMAQPVIPPTPPVQQP 378
           +   P     P  P    P  G+  P P   P A  V PP P V  P
Sbjct: 308 V-HPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPP 353



 Score = 37.4 bits (85), Expect = 0.081
 Identities = 29/82 (35%), Positives = 31/82 (37%), Gaps = 18/82 (21%)

Query: 298 PPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLP 357
           P PP  P G PG     P            P M G+   P     PLP +   P  G LP
Sbjct: 218 PAPPSLPAGPPGVKRPPP------------PLMNGLPPRP-----PLPESLPPPPPGGLP 260

Query: 358 TPPFPPMA-QPVIPPTPPVQQP 378
            PP PP    P  PP PP   P
Sbjct: 261 LPPMPPTGPAPSGPPGPPQLPP 282



 Score = 33.1 bits (74), Expect = 1.5
 Identities = 36/115 (31%), Positives = 43/115 (37%), Gaps = 13/115 (11%)

Query: 275 PAAAV-PPAPTATVPAAAA-PAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMG 332
           PA  V PPAP    PA    P  +   PP      P  G+  PA   H       P   G
Sbjct: 304 PAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPG 363

Query: 333 IQQDP---MHHQVP-LPP-----NGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQP 378
           +   P   +H Q P + P     + Q PG    P P   P A P + P PP   P
Sbjct: 364 VHPPPSAGVHPQAPGVHPAAPAVHPQAPGVH-PPAPGMHPQA-PGVHPQPPGVHP 416


>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
          Length = 1170

 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 103/358 (28%), Positives = 125/358 (34%), Gaps = 79/358 (22%)

Query: 639 PVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGP 698
           P  P P P   P+  +  P P+    P   PH P PP    + P   TP + + P    P
Sbjct: 320 PPPPPPPPQQQPIRSLFQPQPLQPLLPVQHPHHPSPPQGMHMPPQLETPRMMMTP----P 375

Query: 699 GVPPPPPPPPFLRPGFNPMHLPPGFLP----PGPPPPITPPVSIPPPHTPPISIPNSTIA 754
            V P  P    + P F    + P  +P    P  P P   P   P P   P   P     
Sbjct: 376 PVTPQQPKNIHINPHFKGTVVTPVQVPLLPVPSQPRPAVGPQRFPGPPEFPQHTPG---- 431

Query: 755 GINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTN----LPTPPVTQP 810
                         P+P   S                   PP  P       P PP  + 
Sbjct: 432 --------------PVPNSFSQ------------------PPRLPLQDQWRAPPPPQDRD 459

Query: 811 VSLLGTQGVAPGPV-IGLQA--------PSTGLLGARPGLIPLQRP-----PGMPPPHLQ 856
              LG  G    P  + L+         P T L  + P  +P Q P     PG       
Sbjct: 460 PFFLGVSGEPRFPSHLFLEQRSPPPPPPPPTLLNSSHP--VPTQSPLPFTQPGPAFNQQG 517

Query: 857 RFPLMP-PRPMPPHMMHRGPPPGPGG---FAMPPPHGMKGPFPPHGPFVRPGGMPGLGGP 912
           + P+ P  RP+ P +     PPGP G   F+ P     +   PP  PF+   G P L   
Sbjct: 518 QQPVFPRERPVRPALQ----PPGPVGILHFSQPGSATTRPFIPPRQPFLPGPGQPFLPTH 573

Query: 913 GP----GPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQ 966
                 GP  P      Q  PQQPQQQP PQ   QP  Q   QPPP  QPPP Q  PQ
Sbjct: 574 TQPNLQGPLHPPLPPPHQPQPQQPQQQPPPQ--HQPPHQPPHQPPPQHQPPP-QHPPQ 628



 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 71/301 (23%), Positives = 100/301 (33%), Gaps = 53/301 (17%)

Query: 141 PPPVKVSSEPPTQATPNSV----PAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQP 196
           P P +    PP   TP  +    P  PQ P +     +   F+ T    +Q  L      
Sbjct: 353 PSPPQGMHMPPQLETPRMMMTPPPVTPQQPKN---IHINPHFKGTVVTPVQVPLLPVPSQ 409

Query: 197 PKP-----QSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFD 251
           P+P     + P            +       P  P + +   PPP Q             
Sbjct: 410 PRPAVGPQRFPGPPEFPQHTPGPVPNSFSQPPRLPLQDQWRAPPPPQ------------- 456

Query: 252 YDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDG 311
            D +P  +  S +    +       +  PP P  T+  ++ P     P    PF  PG  
Sbjct: 457 -DRDPFFLGVSGEPRFPSHLFLEQRSPPPPPPPPTLLNSSHPVPTQSP---LPFTQPGPA 512

Query: 312 M----QQPAYTQHQNMDQF--QPRMMGIQQDPMHHQVP--------LPPNGQM---PGFG 354
                QQP + + + +      P  +GI    +H   P        +PP       PG  
Sbjct: 513 FNQQGQQPVFPRERPVRPALQPPGPVGI----LHFSQPGSATTRPFIPPRQPFLPGPGQP 568

Query: 355 LLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQ---QEMEVEQPCIQEVKR 411
            LPT   P +  P+ PP PP  QP     Q Q  P  Q PHQ   Q     QP  Q   +
Sbjct: 569 FLPTHTQPNLQGPLHPPLPPPHQPQPQQPQQQPPPQHQPPHQPPHQPPPQHQPPPQHPPQ 628

Query: 412 H 412
           H
Sbjct: 629 H 629



 Score = 45.1 bits (105), Expect = 4e-04
 Identities = 87/352 (24%), Positives = 114/352 (32%), Gaps = 63/352 (17%)

Query: 140 PPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQ------LFQTTQGQQL---QQIL 190
           P PP      P     PNS    P+LP  D + A          F    G+        L
Sbjct: 420 PGPPEFPQHTPGP--VPNSFSQPPRLPLQDQWRAPPPPQDRDPFFLGVSGEPRFPSHLFL 477

Query: 191 QTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRF 250
           +    PP P  P L N+       +  Q     TQP     AF    Q+  F ++   R 
Sbjct: 478 EQRSPPPPPPPPTLLNSS----HPVPTQSPLPFTQPGP---AFNQQGQQPVFPRERPVRP 530

Query: 251 DYDDEPEAVEESKKEDTTAVTTTA---------PAAAVPPAPTATVPAAAAPAAASPPPP 301
                P  V         + TT           P    P  PT T P    P     PPP
Sbjct: 531 ALQP-PGPVGILHFSQPGSATTRPFIPPRQPFLPGPGQPFLPTHTQPNLQGPLHPPLPPP 589

Query: 302 -----QAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLL 356
                Q P   P    Q P    HQ   Q QP      Q P  HQ     +        +
Sbjct: 590 HQPQPQQPQQQPPPQHQPPHQPPHQPPPQHQPPPQHPPQHPPQHQ-----HHHHHHHLSV 644

Query: 357 PTPPFPPMAQPVIPPTPPVQQPFQASFQAQ------------NEPLTQKPHQQEMEV--- 401
           P PP  PM+QP   P     QP  +S + Q            ++ ++++P QQ       
Sbjct: 645 PPPPLMPMSQPQFRPHVQTAQPQASSSRMQCPQRQGLRHNTTSQNVSKRPMQQMQPTAPR 704

Query: 402 -----EQPCIQEVKRHMSDNRKSRSRSASRSP-----KRRRSRSGSRSRRSR 443
                E P        MS +R S + SA   P        R+ +GSRS + +
Sbjct: 705 NSNLRELPIAPSHVIEMSSSRCSATPSAQVKPIVSASPPSRAVAGSRSSQGK 756



 Score = 37.0 bits (84), Expect = 0.11
 Identities = 24/45 (53%), Positives = 27/45 (60%), Gaps = 5/45 (11%)

Query: 355 LLPT-PPFPPMAQPVIPPTPPVQQPFQASFQAQN-EPL--TQKPH 395
           LLPT PP  P A P  PP PP QQP ++ FQ Q  +PL   Q PH
Sbjct: 308 LLPTQPPVVPQAPPP-PPPPPQQQPIRSLFQPQPLQPLLPVQHPH 351


>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
          Length = 424

 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 85/267 (31%), Positives = 104/267 (38%), Gaps = 74/267 (27%)

Query: 663 PPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPG-FGPGVPPPPPPPPFLRPGFNPMHLPP 721
           PPP  P      PVV +L   +  PP G+PPPG F P VPPP   PP + P   P  +PP
Sbjct: 216 PPPSAPN-----PVVSSLG--SGLPPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPP 268

Query: 722 GFLPPGPPPPITPPVSIP------PPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVS 775
           G    GPP   TP    P      P   PP  +P+  ++ +         +G+P     +
Sbjct: 269 GAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHP----HA 324

Query: 776 GARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLL 835
           G  G+          G   PP  P  +P                                
Sbjct: 325 GPPGS----------GGQPPPRPPPGMP-------------------------------- 342

Query: 836 GARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPP-----GPGGFAMPPPHG- 889
              PG  P+  PP  PP      P+  P PMPPH M RGPPP     G  G   PPP+G 
Sbjct: 343 --HPGPPPMGMPPRGPP---FGSPMGHPGPMPPHGM-RGPPPLMPPHGYTGPPRPPPYGY 396

Query: 890 MKGPFPPHGPFVRPGGMPGLGGPGPGP 916
            +GP PP  P  RP   P   GP  GP
Sbjct: 397 QRGPLPPPRPTPRPPVPP--RGPLRGP 421



 Score = 87.4 bits (215), Expect = 7e-17
 Identities = 92/280 (32%), Positives = 106/280 (37%), Gaps = 73/280 (26%)

Query: 669 PHQ---PGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLP 725
           PHQ     PP   A  P   +   G+PPPG  P    PPP PP       P  LPPG  P
Sbjct: 207 PHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPPGSFPPPVPP-------PGALPPGIPP 259

Query: 726 PGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGD 785
             PPPP+ P  +    H PP                   S G P         G    G 
Sbjct: 260 AMPPPPMPPGAA---GHGPP-------------------SAGTP---------GAGHPG- 287

Query: 786 SVKMYGSAVP-PAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPL 844
               +G + P P  P  +P P ++Q       Q    GP  GL  P  G  G+  G  P 
Sbjct: 288 ----HGHSHPHPFPPGGMPHPGMSQ------MQLAHHGPH-GLGHPHAGPPGSG-GQPPP 335

Query: 845 QRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPG 904
           + PPGMP P        PP  MPP    RGPP G        P G  GP PPHG    P 
Sbjct: 336 RPPPGMPHPG------PPPMGMPP----RGPPFGS-------PMGHPGPMPPHGMRGPPP 378

Query: 905 GMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQP 944
            MP  G  GP    P        PP +P  +P P  P+ P
Sbjct: 379 LMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRP-PVPPRGP 417



 Score = 72.0 bits (175), Expect = 3e-12
 Identities = 59/180 (32%), Positives = 66/180 (36%), Gaps = 35/180 (19%)

Query: 820 APGPVI-----GLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRG 874
           AP PV+     GL  P     G+ P  +P   PPG  PP +   P MPP PMPP     G
Sbjct: 220 APNPVVSSLGSGLPPPGMPPPGSFPPPVP---PPGALPPGIP--PAMPPPPMPPGAAGHG 274

Query: 875 PPPGPGGFAMPPPHGMKGPFP-PHGPFVRPG---------GMPGLGGPGPGPGGPEDRDG 924
           PP      A  P HG   P P P G    PG         G  GLG P  GP G     G
Sbjct: 275 PPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAGPPG----SG 330

Query: 925 RQQPPQQPQQQPQPQAPQ-----------QPQQQQQQQPPPSQQPPPTQQQPQQFRNDNR 973
            Q PP+ P   P P  P             P       PP   + PP    P  +    R
Sbjct: 331 GQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPR 390



 Score = 71.2 bits (173), Expect = 5e-12
 Identities = 78/261 (29%), Positives = 89/261 (34%), Gaps = 85/261 (32%)

Query: 640 VSPIPKPLPVPVPPIPVPAPITVPP-----PQVPPHQPGPPV----VGALQPPAFTPPLG 690
           VS +   LP P  P P   P  VPP     P +PP  P PP+     G   P A TP  G
Sbjct: 225 VSSLGSGLPPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGPPSAGTP--G 282

Query: 691 IPPPGFGPGVPPPPPPPPFLRPGFNPM----HLPPGFLPP--GPP-----PPITPPVSIP 739
              PG G   P P PP     PG + M    H P G   P  GPP     PP  PP  +P
Sbjct: 283 AGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMP 342

Query: 740 PPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAP 799
            P  PP+ +P                +G+P P    G RG                    
Sbjct: 343 HPGPPPMGMP-------PRGPPFGSPMGHPGPMPPHGMRG-------------------- 375

Query: 800 TNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFP 859
                PP+  P    G                               PP  PP   QR P
Sbjct: 376 ----PPPLMPPHGYTG-------------------------------PPRPPPYGYQRGP 400

Query: 860 LMPPRPMP-PHMMHRGPPPGP 879
           L PPRP P P +  RGP  GP
Sbjct: 401 LPPPRPTPRPPVPPRGPLRGP 421



 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 45/128 (35%), Positives = 57/128 (44%), Gaps = 13/128 (10%)

Query: 619 PKKPENEVAQNG--GAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPV 676
           P   + ++A +G  G    H  P     +P P P P +P P P   PP  +PP   GPP 
Sbjct: 304 PGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGP---PPMGMPPR--GPPF 358

Query: 677 VGALQPPAFTPPLGI--PPPGFGP-GVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPIT 733
              +  P   PP G+  PPP   P G   PP PPP+   G+    LPP    P PP P  
Sbjct: 359 GSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPY---GYQRGPLPPPRPTPRPPVPPR 415

Query: 734 PPVSIPPP 741
            P+  P P
Sbjct: 416 GPLRGPLP 423



 Score = 41.6 bits (96), Expect = 0.004
 Identities = 42/115 (36%), Positives = 48/115 (41%), Gaps = 15/115 (13%)

Query: 275 PAAAVPPA-PTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMM-- 331
           P  A+PP  P A  P    P AA   PP A  G PG G   P +  H +   F P  M  
Sbjct: 249 PPGALPPGIPPAMPPPPMPPGAAGHGPPSA--GTPGAG--HPGH-GHSHPHPFPPGGMPH 303

Query: 332 -GIQQDPMHHQVPL---PPNGQMPGFGLLPTP-PFPPMAQPVIPP--TPPVQQPF 379
            G+ Q  + H  P     P+   PG G  P P P P M  P  PP   PP   PF
Sbjct: 304 PGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPF 358



 Score = 40.4 bits (93), Expect = 0.010
 Identities = 32/116 (27%), Positives = 41/116 (35%), Gaps = 41/116 (35%)

Query: 288 PAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQ------DPMHHQ 341
           P A  P +   PPP+ P G P  G                P  MG+         PM H 
Sbjct: 322 PHAGPPGSGGQPPPRPPPGMPHPG----------------PPPMGMPPRGPPFGSPMGHP 365

Query: 342 VPLPPNGQ------MPGFGLL-------------PTPPFPPMAQPVIPPTPPVQQP 378
            P+PP+G       MP  G               P PP  P  +P +PP  P++ P
Sbjct: 366 GPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPRGPLRGP 421



 Score = 32.3 bits (72), Expect = 2.6
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 642 PIPKPLPVPVPPIPVPAPITVPPPQ 666
           P+P P P P PP+P   P+  P PQ
Sbjct: 400 PLPPPRPTPRPPVPPRGPLRGPLPQ 424



 Score = 32.0 bits (71), Expect = 3.4
 Identities = 33/125 (26%), Positives = 41/125 (32%), Gaps = 39/125 (31%)

Query: 277 AAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQD 336
           A  PP P+A  P  ++  +  PPP     G P  G   P                     
Sbjct: 212 ADAPPPPSAPNPVVSSLGSGLPPP-----GMPPPGSFPP--------------------- 245

Query: 337 PMHHQVPLPPNGQMPGFGL---LPTPPFPPMAQPVIPP---TPPVQQPFQASFQAQNEPL 390
                 P+PP G +P  G+   +P PP PP A    PP   TP    P          P 
Sbjct: 246 ------PVPPPGALPP-GIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPP 298

Query: 391 TQKPH 395
              PH
Sbjct: 299 GGMPH 303


>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
          Length = 1012

 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 102/385 (26%), Positives = 133/385 (34%), Gaps = 70/385 (18%)

Query: 602 EGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKP-------------LP 648
           EG   DS ++N +    PK  + +           T P  P P+              L 
Sbjct: 130 EGESSDSRSVNDEGSSDPKDIDQD--------NRSTSPSIPSPQDNESDSDSSAQQQMLQ 181

Query: 649 VPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPP 708
              P +  P  +T  P   PP  P  P  G        PP G P     P  P  P  P 
Sbjct: 182 AQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP- 240

Query: 709 FLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGN 768
                   +   P   P  PP P  PP   P P   P++      +  +         G 
Sbjct: 241 ---VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGP 297

Query: 769 PIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQ 828
           P P        + ++G  ++  G    P  P  LP P  +Q  + LGT   A  P   LQ
Sbjct: 298 PGP-------HSLQAGPLLQHPG----PPQPFGLP-PQASQGQAPLGTSPAAAYPHTSLQ 345

Query: 829 APSTGLLGARPGLIPLQRPP---GMPP-----PHLQRFPLMPPRPMPPHMMHRGPPPGPG 880
            P      A    +  Q+PP    +PP     PH++  P  P   +P    H+ PP   G
Sbjct: 346 LP------ASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSG 399

Query: 881 GFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQ--PQQQPQP 938
               P P  M    PP  P ++P  +  L    P    P        PP Q  PQ QP P
Sbjct: 400 ----PSPFSMNANLPP-PPALKP--LSSLSTHHPPSAHP--------PPLQLMPQSQPLP 444

Query: 939 QAPQQPQ--QQQQQQPPPSQQPPPT 961
            +P QP    Q Q  PPP    PPT
Sbjct: 445 SSPAQPPGLTQSQNLPPPPASHPPT 469



 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 64/211 (30%), Positives = 78/211 (36%), Gaps = 51/211 (24%)

Query: 638 EPVSPIPKPLPVPVPPIPVPAPITVPPPQV---PPHQPGP---------PVVGALQP--- 682
           +P+ P P  +P   PP   P P  +P PQ    PPH  GP         P   AL+P   
Sbjct: 362 QPLPPAPLAMPHIKPPPTTPIP-QLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSS 420

Query: 683 -PAFTPPLGIPPP----------GFGPGVPP--------PPPPPPFLRPGFNPMHLPPGF 723
                PP   PPP             P  PP        PPPP      G + +   P F
Sbjct: 421 LSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPF 480

Query: 724 ----LPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGN----PIPTV-- 773
                 PG PPPITPP + P   TPP     S     +       SI      P+PTV  
Sbjct: 481 AQHPFVPGGPPPITPP-TCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQI 539

Query: 774 VSGARGNAESGDSVKMYGSAVPPAAPTNLPT 804
              A  +AE  +S        PP +P+  PT
Sbjct: 540 KEEALDDAEEPES-----PPPPPRSPSPEPT 565



 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 99/422 (23%), Positives = 144/422 (34%), Gaps = 77/422 (18%)

Query: 139 SPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPK 198
           SP PP   S  PP Q    S       PS+ + A      Q   G    Q     Q P  
Sbjct: 259 SPHPPPHPSPHPPLQPLTGSAGQ----PSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGP 314

Query: 199 PQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEA 258
           PQ   L      Q     A L T+P       +   P  Q     ++          P A
Sbjct: 315 PQPFGLP----PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLA 370

Query: 259 VEESKKEDTTAVTTT-APAA----------------AVPPAPTATVPAAAA----PAAAS 297
           +   K   TT +    AP A                A  P P A  P ++     P +A 
Sbjct: 371 MPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAH 430

Query: 298 PPP----PQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGF 353
           PPP    PQ+    P    Q P  TQ QN+    P         +H   P PP  Q P  
Sbjct: 431 PPPLQLMPQSQ-PLPSSPAQPPGLTQSQNLP---PPPASHPPTGLHQVAPQPPFAQHPFV 486

Query: 354 GLLPTPPFPPM--------------AQPVIP---------------PTPPVQQPFQASFQ 384
              P P  PP               AQP                  P P VQ   +A   
Sbjct: 487 PGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDD 546

Query: 385 AQNEPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSR------SASRSPKRRRSRSGSR 438
           A+ EP +  P  +    E P + +   H S + +          S +R+       +GS+
Sbjct: 547 AE-EPESPPPPPRSPSPE-PTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSK 604

Query: 439 SRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQVKPETASVCSTTLWVG 498
             +   +R  +  + +R    ++R +  R++EKE+ER ++   + + E A+  S++   G
Sbjct: 605 LAK---KREEAIEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEG 661

Query: 499 QL 500
           +L
Sbjct: 662 RL 663



 Score = 48.5 bits (114), Expect = 4e-05
 Identities = 68/244 (27%), Positives = 81/244 (33%), Gaps = 52/244 (21%)

Query: 743 TPPISIPNSTIAGINEDTT------------KDLSIGN--PIPTVVSGARGNAESGDSVK 788
           T  IS PNS   G  E +             KD+   N    P++ S     ++S  S +
Sbjct: 117 TQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQ 176

Query: 789 MYG-SAVPPA--APTNLPTPPVTQPVSLLGTQGVAPGPVIGLQA-PSTGLLGARPGLIPL 844
                A PPA  APT +   P + P      Q   PGP     A P  G   A       
Sbjct: 177 QQMLQAQPPALQAPTGVTPAPSSAPPGT--PQLPTPGPTPSATAVPPQGSPTASQAPNQP 234

Query: 845 QRPPG-MPPPHLQRFP-LMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVR 902
           Q P   +P  H+Q+ P L P RP  PH               PPPH    P PP  P   
Sbjct: 235 QAPTAPVPHTHIQQAPALHPQRPPSPH---------------PPPH--PSPHPPLQPLTG 277

Query: 903 PGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQ 962
             G P                   QPP   Q  P P + Q     Q   PP     PP  
Sbjct: 278 SAGQPSA-------------PSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQA 324

Query: 963 QQPQ 966
            Q Q
Sbjct: 325 SQGQ 328



 Score = 37.7 bits (86), Expect = 0.062
 Identities = 59/284 (20%), Positives = 96/284 (33%), Gaps = 19/284 (6%)

Query: 120 AAGTSNAAPVAENVTNNEGSPPPPVKVSS-EPPTQATPNSVPAVPQLPSSDAFAAVAQ-- 176
           A+     +P+ E++ ++  + P     SS +   +    S   V +  SS   +   Q  
Sbjct: 39  ASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQRE 98

Query: 177 --LFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAA-- 232
                T +  +        Q+  +P SP+      +  +++  +  + P    +   +  
Sbjct: 99  KVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTS 158

Query: 233 --FPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAA 290
              P P+   +       +     +P A++ +    T A ++  P     P P  T  A 
Sbjct: 159 PSIPSPQDNESDSDSSAQQQMLQAQPPALQ-APTGVTPAPSSAPPGTPQLPTPGPTPSAT 217

Query: 291 AAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQM 350
           A P   SP   QAP   P        +T  Q      P+       P H   P P     
Sbjct: 218 AVPPQGSPTASQAP-NQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPH---PSPHPPLQ 273

Query: 351 PGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKP 394
           P  G    P  P  AQP +    P   P   S QA   PL Q P
Sbjct: 274 PLTGSAGQPSAPSHAQPPLHGQGP---PGPHSLQA--GPLLQHP 312


>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 102/385 (26%), Positives = 133/385 (34%), Gaps = 70/385 (18%)

Query: 602  EGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKP-------------LP 648
            EG   DS ++N +    PK  + +           T P  P P+              L 
Sbjct: 684  EGESSDSRSVNDEGSSDPKDIDQD--------NRSTSPSIPSPQDNESDSDSSAQQQMLQ 735

Query: 649  VPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPP 708
               P +  P  +T  P   PP  P  P  G        PP G P     P  P  P  P 
Sbjct: 736  AQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP- 794

Query: 709  FLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGN 768
                    +   P   P  PP P  PP   P P   P++      +  +         G 
Sbjct: 795  ---VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGP 851

Query: 769  PIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQ 828
            P P        + ++G  ++  G    P  P  LP P  +Q  + LGT   A  P   LQ
Sbjct: 852  PGP-------HSLQAGPLLQHPG----PPQPFGLP-PQASQGQAPLGTSPAAAYPHTSLQ 899

Query: 829  APSTGLLGARPGLIPLQRPP---GMPP-----PHLQRFPLMPPRPMPPHMMHRGPPPGPG 880
             P      A    +  Q+PP    +PP     PH++  P  P   +P    H+ PP   G
Sbjct: 900  LP------ASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSG 953

Query: 881  GFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQ--PQQQPQP 938
                P P  M    PP  P ++P  +  L    P    P        PP Q  PQ QP P
Sbjct: 954  ----PSPFSMNANLPP-PPALKP--LSSLSTHHPPSAHP--------PPLQLMPQSQPLP 998

Query: 939  QAPQQPQ--QQQQQQPPPSQQPPPT 961
             +P QP    Q Q  PPP    PPT
Sbjct: 999  SSPAQPPGLTQSQNLPPPPASHPPT 1023



 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 64/211 (30%), Positives = 78/211 (36%), Gaps = 51/211 (24%)

Query: 638  EPVSPIPKPLPVPVPPIPVPAPITVPPPQV---PPHQPGP---------PVVGALQP--- 682
            +P+ P P  +P   PP   P P  +P PQ    PPH  GP         P   AL+P   
Sbjct: 916  QPLPPAPLAMPHIKPPPTTPIP-QLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSS 974

Query: 683  -PAFTPPLGIPPP----------GFGPGVPP--------PPPPPPFLRPGFNPMHLPPGF 723
                 PP   PPP             P  PP        PPPP      G + +   P F
Sbjct: 975  LSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPF 1034

Query: 724  ----LPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGN----PIPTV-- 773
                  PG PPPITPP + P   TPP     S     +       SI      P+PTV  
Sbjct: 1035 AQHPFVPGGPPPITPP-TCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQI 1093

Query: 774  VSGARGNAESGDSVKMYGSAVPPAAPTNLPT 804
               A  +AE  +S        PP +P+  PT
Sbjct: 1094 KEEALDDAEEPES-----PPPPPRSPSPEPT 1119



 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 99/422 (23%), Positives = 144/422 (34%), Gaps = 77/422 (18%)

Query: 139  SPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPK 198
            SP PP   S  PP Q    S       PS+ + A      Q   G    Q     Q P  
Sbjct: 813  SPHPPPHPSPHPPLQPLTGSAGQ----PSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGP 868

Query: 199  PQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEA 258
            PQ   L      Q     A L T+P       +   P  Q     ++          P A
Sbjct: 869  PQPFGLP----PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLA 924

Query: 259  VEESKKEDTTAVTTT-APAA----------------AVPPAPTATVPAAAA----PAAAS 297
            +   K   TT +    AP A                A  P P A  P ++     P +A 
Sbjct: 925  MPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAH 984

Query: 298  PPP----PQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGF 353
            PPP    PQ+    P    Q P  TQ QN+    P         +H   P PP  Q P  
Sbjct: 985  PPPLQLMPQSQ-PLPSSPAQPPGLTQSQNLP---PPPASHPPTGLHQVAPQPPFAQHPFV 1040

Query: 354  GLLPTPPFPPM--------------AQPVIP---------------PTPPVQQPFQASFQ 384
               P P  PP               AQP                  P P VQ   +A   
Sbjct: 1041 PGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDD 1100

Query: 385  AQNEPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSR------SASRSPKRRRSRSGSR 438
            A+ EP +  P  +    E P + +   H S + +          S +R+       +GS+
Sbjct: 1101 AE-EPESPPPPPRSPSPE-PTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSK 1158

Query: 439  SRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQVKPETASVCSTTLWVG 498
              +   +R  +  + +R    ++R +  R++EKE+ER ++   + + E A+  S++   G
Sbjct: 1159 LAK---KREEAIEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEG 1215

Query: 499  QL 500
            +L
Sbjct: 1216 RL 1217



 Score = 48.5 bits (114), Expect = 4e-05
 Identities = 68/244 (27%), Positives = 81/244 (33%), Gaps = 52/244 (21%)

Query: 743 TPPISIPNSTIAGINEDTT------------KDLSIGN--PIPTVVSGARGNAESGDSVK 788
           T  IS PNS   G  E +             KD+   N    P++ S     ++S  S +
Sbjct: 671 TQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQ 730

Query: 789 MYG-SAVPPA--APTNLPTPPVTQPVSLLGTQGVAPGPVIGLQA-PSTGLLGARPGLIPL 844
                A PPA  APT +   P + P      Q   PGP     A P  G   A       
Sbjct: 731 QQMLQAQPPALQAPTGVTPAPSSAPPGT--PQLPTPGPTPSATAVPPQGSPTASQAPNQP 788

Query: 845 QRPPG-MPPPHLQRFP-LMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVR 902
           Q P   +P  H+Q+ P L P RP  PH               PPPH    P PP  P   
Sbjct: 789 QAPTAPVPHTHIQQAPALHPQRPPSPH---------------PPPH--PSPHPPLQPLTG 831

Query: 903 PGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQ 962
             G P                   QPP   Q  P P + Q     Q   PP     PP  
Sbjct: 832 SAGQPSA-------------PSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQA 878

Query: 963 QQPQ 966
            Q Q
Sbjct: 879 SQGQ 882



 Score = 37.7 bits (86), Expect = 0.062
 Identities = 59/284 (20%), Positives = 96/284 (33%), Gaps = 19/284 (6%)

Query: 120 AAGTSNAAPVAENVTNNEGSPPPPVKVSS-EPPTQATPNSVPAVPQLPSSDAFAAVAQ-- 176
           A+     +P+ E++ ++  + P     SS +   +    S   V +  SS   +   Q  
Sbjct: 593 ASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQRE 652

Query: 177 --LFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAA-- 232
                T +  +        Q+  +P SP+      +  +++  +  + P    +   +  
Sbjct: 653 KVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTS 712

Query: 233 --FPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAA 290
              P P+   +       +     +P A++ +    T A ++  P     P P  T  A 
Sbjct: 713 PSIPSPQDNESDSDSSAQQQMLQAQPPALQ-APTGVTPAPSSAPPGTPQLPTPGPTPSAT 771

Query: 291 AAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQM 350
           A P   SP   QAP   P        +T  Q      P+       P H   P P     
Sbjct: 772 AVPPQGSPTASQAP-NQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPH---PSPHPPLQ 827

Query: 351 PGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKP 394
           P  G    P  P  AQP +    P   P   S QA   PL Q P
Sbjct: 828 PLTGSAGQPSAPSHAQPPLHGQGP---PGPHSLQA--GPLLQHP 866



 Score = 31.2 bits (69), Expect = 5.8
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 995  ENDRERYGNRNDDRDNSNRDR-REWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRES 1053
            + D+E+  +R+ DR+   RD+ RE     P R    +   +N   S H + E D+ +  +
Sbjct: 8    DKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHSEDE-DNDNNSA 66

Query: 1054 RREKEEARGKEKP 1066
              E+   + K+KP
Sbjct: 67   TAEESTKKNKKKP 79


>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 102/385 (26%), Positives = 133/385 (34%), Gaps = 70/385 (18%)

Query: 602  EGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKP-------------LP 648
            EG   DS ++N +    PK  + +           T P  P P+              L 
Sbjct: 684  EGESSDSRSVNDEGSSDPKDIDQD--------NRSTSPSIPSPQDNESDSDSSAQQQMLQ 735

Query: 649  VPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPP 708
               P +  P  +T  P   PP  P  P  G        PP G P     P  P  P  P 
Sbjct: 736  AQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP- 794

Query: 709  FLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGN 768
                    +   P   P  PP P  PP   P P   P++      +  +         G 
Sbjct: 795  ---VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGP 851

Query: 769  PIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQ 828
            P P        + ++G  ++  G    P  P  LP P  +Q  + LGT   A  P   LQ
Sbjct: 852  PGP-------HSLQAGPLLQHPG----PPQPFGLP-PQASQGQAPLGTSPAAAYPHTSLQ 899

Query: 829  APSTGLLGARPGLIPLQRPP---GMPP-----PHLQRFPLMPPRPMPPHMMHRGPPPGPG 880
             P      A    +  Q+PP    +PP     PH++  P  P   +P    H+ PP   G
Sbjct: 900  LP------ASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSG 953

Query: 881  GFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQ--PQQQPQP 938
                P P  M    PP  P ++P  +  L    P    P        PP Q  PQ QP P
Sbjct: 954  ----PSPFSMNANLPP-PPALKP--LSSLSTHHPPSAHP--------PPLQLMPQSQPLP 998

Query: 939  QAPQQPQ--QQQQQQPPPSQQPPPT 961
             +P QP    Q Q  PPP    PPT
Sbjct: 999  SSPAQPPGLTQSQNLPPPPASHPPT 1023



 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 64/211 (30%), Positives = 78/211 (36%), Gaps = 51/211 (24%)

Query: 638  EPVSPIPKPLPVPVPPIPVPAPITVPPPQV---PPHQPGP---------PVVGALQP--- 682
            +P+ P P  +P   PP   P P  +P PQ    PPH  GP         P   AL+P   
Sbjct: 916  QPLPPAPLAMPHIKPPPTTPIP-QLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSS 974

Query: 683  -PAFTPPLGIPPP----------GFGPGVPP--------PPPPPPFLRPGFNPMHLPPGF 723
                 PP   PPP             P  PP        PPPP      G + +   P F
Sbjct: 975  LSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPF 1034

Query: 724  ----LPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGN----PIPTV-- 773
                  PG PPPITPP + P   TPP     S     +       SI      P+PTV  
Sbjct: 1035 AQHPFVPGGPPPITPP-TCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQI 1093

Query: 774  VSGARGNAESGDSVKMYGSAVPPAAPTNLPT 804
               A  +AE  +S        PP +P+  PT
Sbjct: 1094 KEEALDDAEEPES-----PPPPPRSPSPEPT 1119



 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 99/422 (23%), Positives = 144/422 (34%), Gaps = 77/422 (18%)

Query: 139  SPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPK 198
            SP PP   S  PP Q    S       PS+ + A      Q   G    Q     Q P  
Sbjct: 813  SPHPPPHPSPHPPLQPLTGSAGQ----PSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGP 868

Query: 199  PQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEA 258
            PQ   L      Q     A L T+P       +   P  Q     ++          P A
Sbjct: 869  PQPFGLP----PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLA 924

Query: 259  VEESKKEDTTAVTTT-APAA----------------AVPPAPTATVPAAAA----PAAAS 297
            +   K   TT +    AP A                A  P P A  P ++     P +A 
Sbjct: 925  MPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAH 984

Query: 298  PPP----PQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGF 353
            PPP    PQ+    P    Q P  TQ QN+    P         +H   P PP  Q P  
Sbjct: 985  PPPLQLMPQSQ-PLPSSPAQPPGLTQSQNLP---PPPASHPPTGLHQVAPQPPFAQHPFV 1040

Query: 354  GLLPTPPFPPM--------------AQPVIP---------------PTPPVQQPFQASFQ 384
               P P  PP               AQP                  P P VQ   +A   
Sbjct: 1041 PGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDD 1100

Query: 385  AQNEPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSR------SASRSPKRRRSRSGSR 438
            A+ EP +  P  +    E P + +   H S + +          S +R+       +GS+
Sbjct: 1101 AE-EPESPPPPPRSPSPE-PTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSK 1158

Query: 439  SRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQVKPETASVCSTTLWVG 498
              +   +R  +  + +R    ++R +  R++EKE+ER ++   + + E A+  S++   G
Sbjct: 1159 LAK---KREEAIEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEG 1215

Query: 499  QL 500
            +L
Sbjct: 1216 RL 1217



 Score = 48.5 bits (114), Expect = 4e-05
 Identities = 68/244 (27%), Positives = 81/244 (33%), Gaps = 52/244 (21%)

Query: 743 TPPISIPNSTIAGINEDTT------------KDLSIGN--PIPTVVSGARGNAESGDSVK 788
           T  IS PNS   G  E +             KD+   N    P++ S     ++S  S +
Sbjct: 671 TQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQ 730

Query: 789 MYG-SAVPPA--APTNLPTPPVTQPVSLLGTQGVAPGPVIGLQA-PSTGLLGARPGLIPL 844
                A PPA  APT +   P + P      Q   PGP     A P  G   A       
Sbjct: 731 QQMLQAQPPALQAPTGVTPAPSSAPPGT--PQLPTPGPTPSATAVPPQGSPTASQAPNQP 788

Query: 845 QRPPG-MPPPHLQRFP-LMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVR 902
           Q P   +P  H+Q+ P L P RP  PH               PPPH    P PP  P   
Sbjct: 789 QAPTAPVPHTHIQQAPALHPQRPPSPH---------------PPPH--PSPHPPLQPLTG 831

Query: 903 PGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQ 962
             G P                   QPP   Q  P P + Q     Q   PP     PP  
Sbjct: 832 SAGQPSA-------------PSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQA 878

Query: 963 QQPQ 966
            Q Q
Sbjct: 879 SQGQ 882



 Score = 37.7 bits (86), Expect = 0.062
 Identities = 59/284 (20%), Positives = 96/284 (33%), Gaps = 19/284 (6%)

Query: 120 AAGTSNAAPVAENVTNNEGSPPPPVKVSS-EPPTQATPNSVPAVPQLPSSDAFAAVAQ-- 176
           A+     +P+ E++ ++  + P     SS +   +    S   V +  SS   +   Q  
Sbjct: 593 ASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQRE 652

Query: 177 --LFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAA-- 232
                T +  +        Q+  +P SP+      +  +++  +  + P    +   +  
Sbjct: 653 KVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTS 712

Query: 233 --FPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAA 290
              P P+   +       +     +P A++ +    T A ++  P     P P  T  A 
Sbjct: 713 PSIPSPQDNESDSDSSAQQQMLQAQPPALQ-APTGVTPAPSSAPPGTPQLPTPGPTPSAT 771

Query: 291 AAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQM 350
           A P   SP   QAP   P        +T  Q      P+       P H   P P     
Sbjct: 772 AVPPQGSPTASQAP-NQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPH---PSPHPPLQ 827

Query: 351 PGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKP 394
           P  G    P  P  AQP +    P   P   S QA   PL Q P
Sbjct: 828 PLTGSAGQPSAPSHAQPPLHGQGP---PGPHSLQA--GPLLQHP 866



 Score = 31.2 bits (69), Expect = 5.8
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 995  ENDRERYGNRNDDRDNSNRDR-REWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRES 1053
            + D+E+  +R+ DR+   RD+ RE     P R    +   +N   S H + E D+ +  +
Sbjct: 8    DKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHSEDE-DNDNNSA 66

Query: 1054 RREKEEARGKEKP 1066
              E+   + K+KP
Sbjct: 67   TAEESTKKNKKKP 79


>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
          Length = 2240

 Score = 89.4 bits (220), Expect = 2e-17
 Identities = 154/529 (29%), Positives = 204/529 (38%), Gaps = 133/529 (25%)

Query: 681  QPPAFTPPLGIPPPGFGPGVPPPP------PPPPFLRPGFNPMHLP--PGFLPPGPPPPI 732
            +P   T PL  PPPG   G   PP      P P  L  G + +H P  PG   P PP P 
Sbjct: 1728 RPGEGTAPL--PPPGQKVGGSQPPFQGQREPGPHAL--GMSGLHGPNFPGPRGPAPPFPE 1783

Query: 733  TPPVSIPPPHTPPIS--------IPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESG 784
                S   P  PP +        IP S  +G +       S G P P+ + G RG A S 
Sbjct: 1784 ENIASNDGPRGPPPARFGAQKGPIP-SLFSGQHGPPPYGDSRG-PSPSYLGGPRGVAPSQ 1841

Query: 785  -------DSVKMYGSAVPPAAPTNLPTP-PVTQPVSLLGTQGVAPGPVIGLQAPSTGLLG 836
                      K      P    T  P     T+    LG++G AP    G +        
Sbjct: 1842 FEERKDPHGEKREFQDAPYNEVTGAPAQFEGTEQAPFLGSRGGAPFQFGGQR-------- 1893

Query: 837  ARPGLIPLQRPPGMPPPHL---QRFPLMPPR----PMPPHMMH----RGPPP----GPGG 881
             RP L  L+ P G PPP     QR P  PP     P  PH       RGP P    GP G
Sbjct: 1894 -RPLLSQLKGPRGGPPPSQFGGQRGP--PPGHFVGPRGPHPSQFETARGPHPNQFEGPRG 1950

Query: 882  FA---MPPPHGMKGP--------FPPHGPFVR---PGGMPGLGGPGPGPGGPEDRDGR-- 925
             A   MP P G++           PP     R   P    GL G  P     E    R  
Sbjct: 1951 QAPNFMPGPRGIQPQQFEDQRVHSPPRFTNQRAPAPLQFGGLRGSAPFSEKNEQTPSRFH 2010

Query: 926  --QQPPQQPQQQPQP--QAPQQPQQQQQQQ-----PPPSQQPPPTQQQPQ--------QF 968
               Q PQ  +  P+P  + P  P Q ++ +     PP +       Q P+         F
Sbjct: 2011 FQGQAPQVMKPGPRPLLELPSHPPQHRKDRWEEAGPPSALSSSAPGQGPEADGQWASADF 2070

Query: 969  R----NDNRQQFNSGRDQERF---------------GRRSFGNRVENDRERYGNRNDDRD 1009
            R    ++ R Q   GR +ERF               GR S   R E +R R  +R  D D
Sbjct: 2071 REGKGHEYRNQTFEGRQRERFDVGPKEKPLEEPDAQGRASEDRRRERERGRNWSRERDWD 2130

Query: 1010 -----NSNRDR---REWGR---RSPDRDRHRDLE-----ERNRRSSGHRDRERD---SRD 1050
                 + +RD+   R+W R   RS +RDR R+ +     +R+R  S +R+RERD    RD
Sbjct: 2131 RPREWDRHRDKDSSRDWDRNRERSANRDREREADRGKEWDRSRERSRNRERERDRRRDRD 2190

Query: 1051 RESRREKEEARGKEKPEVTDRAGGNKTVE------PPISQVGNVDTASE 1093
            R   RE++  + +++    DR   +K+ E      P  S+  +  TAS+
Sbjct: 2191 RSRSRERDRDKARDRERGRDRKDRSKSKESARDPKPEASRASDAGTASQ 2239



 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 25/68 (36%), Positives = 36/68 (52%)

Query: 415  DNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERE 474
            +    R +   RS +R R+R   R RR    RSRSR RDR +   R R ++R+DR K +E
Sbjct: 2160 EREADRGKEWDRSRERSRNRERERDRRRDRDRSRSRERDRDKARDRERGRDRKDRSKSKE 2219

Query: 475  RRQKGLPQ 482
              +   P+
Sbjct: 2220 SARDPKPE 2227



 Score = 48.1 bits (113), Expect = 5e-05
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 16/135 (11%)

Query: 370  PPTPPVQQPF---QASFQAQNEPLTQKPHQQEMEVEQPCIQEVKRHMSDNR---KSRSRS 423
            P   P+++P    +AS   + E    +   +E + ++P   +  R    +R   ++R RS
Sbjct: 2095 PKEKPLEEPDAQGRASEDRRRERERGRNWSRERDWDRPREWDRHRDKDSSRDWDRNRERS 2154

Query: 424  ASRSPKRR----------RSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKER 473
            A+R  +R           R RS +R R    RR R RSR R R   ++R +ER    K+R
Sbjct: 2155 ANRDREREADRGKEWDRSRERSRNRERERDRRRDRDRSRSRERDRDKARDRERGRDRKDR 2214

Query: 474  ERRQKGLPQVKPETA 488
             + ++     KPE +
Sbjct: 2215 SKSKESARDPKPEAS 2229



 Score = 43.9 bits (102), Expect = 9e-04
 Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 6/183 (3%)

Query: 954  PSQQPPPTQQQPQQFRNDNRQQFNSGRDQE------RFGRRSFGNRVENDRERYGNRNDD 1007
            P + PPP QQ     R   RQ   + R ++      R GRRS    +E+  E       D
Sbjct: 47   PLEPPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATD 106

Query: 1008 RDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPE 1067
             + ++    E    +    +      + R +S  + +  D  D  S  + +    KE   
Sbjct: 107  AETASEGSVESASETRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQN 166

Query: 1068 VTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSGSA 1127
               R    +  E P+  + +       E+G +E    + S+ +     S  EPE D G  
Sbjct: 167  RLRRKREQEPTERPLKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVV 226

Query: 1128 AEA 1130
            ++A
Sbjct: 227  SQA 229



 Score = 39.7 bits (91), Expect = 0.016
 Identities = 76/353 (21%), Positives = 120/353 (33%), Gaps = 58/353 (16%)

Query: 134  TNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQ-------L 186
            T   GSPPPP  +   P  +   +  PA P   ++   AA A    ++           L
Sbjct: 1255 TTPPGSPPPPPPLPEPPVLKVLSSLKPAAPSPATAATTAAAASTAASSTASSASKTASPL 1314

Query: 187  QQILQTF-----------QQPP-----KPQSP--ALDNAVMAQ------VQAITAQLKTT 222
            + ILQT            ++PP      PQ P    ++ V A       VQ      K  
Sbjct: 1315 EHILQTLFGKKKSFDPSAREPPGSTAGLPQEPKTTAEDGVPAPPLLDPIVQQFGQFSKDK 1374

Query: 223  PTQPSEQKAAFPPPEQ---KTAFDKKLLD---RFDYDDEPEAVEESKKE---DTTAVTTT 273
              +  E    + P E+   + AFD +L++   R + +  PEA    ++E   D    T  
Sbjct: 1375 ALEEEEDDRPYDPEEEYDPERAFDTQLVERGRRHEVERAPEAAAAEREEVAYDPEDETIL 1434

Query: 274  APA-AAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMG 332
              A   V   P          +   P  P A    P    QQ    +     + Q R + 
Sbjct: 1435 EEAKVTVDDLPNRMCADVRRNSVERPAEPVAGAATPSLVEQQKMLEELNKQIEEQKRQLE 1494

Query: 333  IQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQ 392
             Q++ +  Q        M  F +      PP    +     P  + FQ   Q+ ++P + 
Sbjct: 1495 EQEEALRQQ-RAAVGVSMAHFSVSDALMSPPPKSSL-----PKAELFQQEQQSADKPASL 1548

Query: 393  KPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASR---------SPKRRRSRSG 436
             P  Q      P  ++ +R  ++  +      SR          P+R  SR G
Sbjct: 1549 PPASQASNHRDP--RQARRLAAETGEGEGEPLSRLSARGAQGALPERDASRGG 1599



 Score = 35.0 bits (79), Expect = 0.40
 Identities = 67/306 (21%), Positives = 110/306 (35%), Gaps = 42/306 (13%)

Query: 89  SEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEG---------- 138
           SED+    R+      +G  K++I QP+++    +    P   +V   +           
Sbjct: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420

Query: 139 SPPPPVKVSS-----EPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTF 193
                +K  S     +P  +      P  P LP   A A +             +I    
Sbjct: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGI-------------KISSVH 467

Query: 194 QQP-PKPQSPALDNAVM--AQVQAITAQL---KTTPTQPSEQKAAFPPPEQKTAFDKKLL 247
           ++P P+ +   +  AV+  A+ +A+  +     +TP+  S+       PE+  A    LL
Sbjct: 468 KRPAPEKKETTVKKAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLL 527

Query: 248 DRFDYDDEPEAVEESKKEDTTAVTTTAPAAAV--PPAPTATVP---AAAAPAAASPPPPQ 302
            +   +D     EE       +  T  P +AV   PAP   VP   + A  AAA+P   +
Sbjct: 528 YKSTKEDRRS--EEKAAAMAASKKTAPPGSAVGKQPAPRNLVPKKSSFANVAAATPAIKK 585

Query: 303 APFGFPGDGMQQPAYTQHQNMDQFQPRMMG-IQQDPMHHQVPLPPNGQMPGFGLLPTPPF 361
            P GF G   ++P  +   +      R  G             P +  + G    P  P 
Sbjct: 586 PPSGFKGTIPKRPWLSATPSSGASAARQAGPAPAAATAASKKFPGSAALVGAVRKPVVPS 645

Query: 362 PPMAQP 367
            PMA P
Sbjct: 646 VPMASP 651



 Score = 32.3 bits (72), Expect = 2.6
 Identities = 42/164 (25%), Positives = 57/164 (34%), Gaps = 34/164 (20%)

Query: 645  KPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPP 704
            +P    VP  P  A  TVP  +  P +   P+  A    + TPP          G PPPP
Sbjct: 1219 QPEEADVPAYPKVA--TVPQSEKKPSKY--PLCSADAAVSTTPP----------GSPPPP 1264

Query: 705  PPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDL 764
            PP P   P   P+      L P  P P T   +     T   S  +S             
Sbjct: 1265 PPLP--EP---PVLKVLSSLKPAAPSPATAATTAAAASTAASSTASSA-----------S 1308

Query: 765  SIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVT 808
               +P+  ++    G  +S D      +  PP +   LP  P T
Sbjct: 1309 KTASPLEHILQTLFGKKKSFDP----SAREPPGSTAGLPQEPKT 1348


>gi|47132519 Ras association and pleckstrin homology domains 1 isoform
            1 [Homo sapiens]
          Length = 1250

 Score = 89.0 bits (219), Expect = 2e-17
 Identities = 97/340 (28%), Positives = 122/340 (35%), Gaps = 81/340 (23%)

Query: 634  TSHTEPVSPIPKPLPVPVPPIPVPAP-ITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIP 692
            T    P  P P P+P P+PP   P P +T+P P     +   PVV    PP  TPP    
Sbjct: 756  TQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAP--TSTKTVAPVVTQAAPPTPTPP---- 809

Query: 693  PPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNST 752
                   VPP    P F          P  ++PP PP   TPPV +PPP  P      S 
Sbjct: 810  -------VPPAKKQPAF----------PASYIPPSPP---TPPVPVPPPTLPK---QQSF 846

Query: 753  IAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPV--TQP 810
             A   +     LS   P+P+V             VK   S  PP      PTPP   +QP
Sbjct: 847  CA---KPPPSPLS---PVPSV-------------VKQIASQFPPP-----PTPPAMESQP 882

Query: 811  VSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQR--FPLMPPRPMPP 868
            +  +        P      P       +P  IP+  P   PPP      FP  PP P+P 
Sbjct: 883  LKPVPANVAPQSPPAVKAKPKW-----QPSSIPVPSPDFPPPPPESSLVFPPPPPSPVP- 936

Query: 869  HMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGP---GGPEDRDGR 925
                  PPP P   A P P     P         PGG      P P P      +   G 
Sbjct: 937  -----APPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKK----PPPTPQRNSSIKSSSGA 987

Query: 926  QQP-PQQPQQQPQPQAPQQPQQ----QQQQQPPPSQQPPP 960
            + P P++P           P +     ++  PPP+  P P
Sbjct: 988  EHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKP 1027



 Score = 88.6 bits (218), Expect = 3e-17
 Identities = 97/356 (27%), Positives = 121/356 (33%), Gaps = 77/356 (21%)

Query: 667 VPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNP---------- 716
           VPP  P P +V        +PPL  PPP   P  PPPPPPPP L     P          
Sbjct: 606 VPPLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFV 665

Query: 717 ------------MHLPPGFLPPGPP--------PPITPP---VSIPPPHTPPISIPNSTI 753
                        H    F PP PP        P I  P   V  PPP  PP   P S +
Sbjct: 666 KYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAM 725

Query: 754 AGINEDTTKDLSIGNPIPTVVSGARGNA--------ESGDSVKMYGSAVPPAAPTNLPTP 805
           A +            P P   S  + +A        +     ++     PP  P   P P
Sbjct: 726 AQL-----------KPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLP 774

Query: 806 PVTQPVSLL----GTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLM 861
           P   P  L+     T      PV+   AP T      P + P ++ P  P  ++   P  
Sbjct: 775 PQAPPKPLVTIPAPTSTKTVAPVVTQAAPPT----PTPPVPPAKKQPAFPASYIPPSPPT 830

Query: 862 PPRPMPPHMMHR------GPPPGPGGFAMPPPHGMK---GPFPPHGPFVRPGGMPGLGGP 912
           PP P+PP  + +       PPP P     P P  +K     FPP  P   P        P
Sbjct: 831 PPVPVPPPTLPKQQSFCAKPPPSP---LSPVPSVVKQIASQFPP--PPTPPAMESQPLKP 885

Query: 913 GPGPGGPEDRDG-RQQPPQQPQQ--QPQPQAPQQPQQQQQQQPPPSQQPPPTQQQP 965
            P    P+     + +P  QP     P P  P  P +     PPP   P P    P
Sbjct: 886 VPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPP 941



 Score = 65.1 bits (157), Expect = 4e-10
 Identities = 92/348 (26%), Positives = 121/348 (34%), Gaps = 73/348 (20%)

Query: 645  KPLPVPVPPIP---------VPAPITVPPPQVPPHQPGPPVVGALQPPAFTP-----PLG 690
            KP P P+ P+P          P P T P  +  P +P P  V    PPA        P  
Sbjct: 849  KPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSS 908

Query: 691  IPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPP--------------V 736
            IP P   P  PPPPP    + P   P  +P    PP PPPP   P               
Sbjct: 909  IPVPS--PDFPPPPPESSLVFPPPPPSPVPA---PPPPPPPTASPTPDKSGSPGKKTSKT 963

Query: 737  SIP----PPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGS 792
            S P    PP TP  +    + +G      K  S    + ++VS     AESG   K   +
Sbjct: 964  SSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRPS----VDSLVSKFTPPAESGSPSK--ET 1017

Query: 793  AVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPP 852
              PPAAP      P    +S +   GV     +  +AP   +L  R     ++ P    P
Sbjct: 1018 LPPPAAPPK----PGKLNLSGVNLPGVLQQGCVSAKAP---VLSGRGKDSVVEFP---SP 1067

Query: 853  PHLQRFPLMPPR---PMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGL 909
            P    FP  PP    P+PP  +     P        P   +  P P     +        
Sbjct: 1068 PSDSDFPPPPPETELPLPPIEI-----PAVFSGNTSPKVAVVNPQPQQWSKMSV------ 1116

Query: 910  GGPGPGPGGPEDRDGRQQPPQQPQQQPQ-----PQAPQQPQQQQQQQP 952
                P P  P+  D  +    +  +QP      PQ P  P+     QP
Sbjct: 1117 -KKAPPPTRPKRNDSTRLTQAEISEQPTMATVVPQVPTSPKSSLSVQP 1163



 Score = 60.8 bits (146), Expect = 7e-09
 Identities = 74/270 (27%), Positives = 97/270 (35%), Gaps = 73/270 (27%)

Query: 140 PPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAA--VAQLF----QTTQGQQLQQILQTF 193
           P PP+     PP    P   P  P LPS  A +A   A +F      T+ Q   Q     
Sbjct: 624 PSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGAL 683

Query: 194 QQPPKP---QSPALDNAVMAQVQAIT----------------AQLKTTPTQPSEQKAAFP 234
            +PP P   QS ++   ++     +                 AQLK  P  PS  + + P
Sbjct: 684 FKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAP 743

Query: 235 PPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPA 294
           PP  K                              +T  AP    PP P   +PA     
Sbjct: 744 PPPLKI------------------------HQVQHITQVAPPTPPPPPP---IPA----- 771

Query: 295 AASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFG 354
              P PPQAP   P   +  PA T  + +       +  Q  P     P+PP  + P F 
Sbjct: 772 ---PLPPQAP---PKPLVTIPAPTSTKTV-----APVVTQAAPPTPTPPVPPAKKQPAFP 820

Query: 355 ---LLPTPPFPPMAQPVIPPTPPVQQPFQA 381
              + P+PP PP+  PV PPT P QQ F A
Sbjct: 821 ASYIPPSPPTPPV--PVPPPTLPKQQSFCA 848



 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 73/289 (25%), Positives = 97/289 (33%), Gaps = 20/289 (6%)

Query: 93  SKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPT 152
           S I R+ N  Q +G     + +P       + +  P      N    PPPP      PP 
Sbjct: 668 STITRLQNASQHSGA----LFKPPTPPVMQSQSVKPQILVPPNGVVPPPPP------PPP 717

Query: 153 QATPNSVPA----VPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKP-QSPALDNA 207
             TP S  A     P  PS   F+A     +  Q Q + Q+      PP P  +P    A
Sbjct: 718 PPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQA 777

Query: 208 VMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKL-LDRFDYDDEPEAVEESKKED 266
               +  I A   T    P   +AA P P       KK       Y              
Sbjct: 778 PPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPP 837

Query: 267 TTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQ-PAYTQHQNMDQ 325
            T     +  A  PP+P + VP+     A+  PPP  P       ++  PA    Q+   
Sbjct: 838 PTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPA 897

Query: 326 FQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPP 374
            + +    +  P    VP P     P    L  PP PP   P  PP PP
Sbjct: 898 VKAKP---KWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPP 943



 Score = 54.3 bits (129), Expect = 6e-07
 Identities = 70/261 (26%), Positives = 89/261 (34%), Gaps = 36/261 (13%)

Query: 131 ENVTNNEGS----PPPPVKVSS--EPPTQATPNSV--PAVPQLPSSDAFAAVAQLFQTTQ 182
           +N + + G+    P PPV  S   +P     PN V  P  P  P     +A+AQL     
Sbjct: 674 QNASQHSGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPC 733

Query: 183 GQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAF 242
              L Q    F  PP P         + QVQ IT     TP  P    A  PP     A 
Sbjct: 734 APSLPQ----FSAPPPPLK-------IHQVQHITQVAPPTPPPPPPIPAPLPPQ----AP 778

Query: 243 DKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQ 302
            K L+              S K     VT  AP    PP P A    A   +   P PP 
Sbjct: 779 PKPLVTI--------PAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPT 830

Query: 303 APFGFPGDGM-QQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPF 361
            P   P   + +Q ++          P    ++Q  +  Q P PP    P     P  P 
Sbjct: 831 PPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQ--IASQFPPPPT--PPAMESQPLKPV 886

Query: 362 PPMAQPVIPPTPPVQQPFQAS 382
           P    P  PP    +  +Q S
Sbjct: 887 PANVAPQSPPAVKAKPKWQPS 907



 Score = 50.4 bits (119), Expect = 9e-06
 Identities = 66/284 (23%), Positives = 95/284 (33%), Gaps = 72/284 (25%)

Query: 114  QPLLDMAAGTSN--AAPVAENVTNNEGSPP-PPVK------VSSEPPTQATPNSVPAVPQ 164
            +PL+ + A TS    APV         +PP PP K       S  PP+  TP      P 
Sbjct: 780  KPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPT 839

Query: 165  LPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPT 224
            LP   +F A                    + PP P SP     V + V+ I +Q    PT
Sbjct: 840  LPKQQSFCA--------------------KPPPSPLSP-----VPSVVKQIASQFPPPPT 874

Query: 225  QPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAP--------- 275
             P+ +     P     A              P AV+   K   +++   +P         
Sbjct: 875  PPAMESQPLKPVPANVA-----------PQSPPAVKAKPKWQPSSIPVPSPDFPPPPPES 923

Query: 276  AAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPG--------DGMQQPAYTQHQN----- 322
            +   PP P + VPA   P   +  P     G PG         G ++P  T  +N     
Sbjct: 924  SLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKS 983

Query: 323  ---MDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPP 363
                +  +P+   +  D +  +   P     P    LP P  PP
Sbjct: 984  SSGAEHPEPKRPSV--DSLVSKFTPPAESGSPSKETLPPPAAPP 1025



 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 39/149 (26%), Positives = 54/149 (36%), Gaps = 16/149 (10%)

Query: 268 TAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQ 327
           T  T + P+  +PP P    P    P    PPPP      P  G   P + ++  + + Q
Sbjct: 617 TPYTASQPSPPLPPPPPP--PPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQ 674

Query: 328 ------------PRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPV 375
                       P    +Q   +  Q+ +PPNG +P     P PP P  A   + P P  
Sbjct: 675 NASQHSGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCA 734

Query: 376 QQPFQASFQAQNEPLTQKPHQQEMEVEQP 404
             P    F A   PL     Q   +V  P
Sbjct: 735 --PSLPQFSAPPPPLKIHQVQHITQVAPP 761



 Score = 42.7 bits (99), Expect = 0.002
 Identities = 47/173 (27%), Positives = 58/173 (33%), Gaps = 20/173 (11%)

Query: 794 VPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPP 853
           +PP  P   P PP   P          P P+    APS G   A P  +       +   
Sbjct: 628 LPPPPPPPPPPPPPPPP---------PPPPLPSQSAPSAG--SAAPMFVKYSTITRLQNA 676

Query: 854 HLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPG 913
                 L  P P PP M  +   P      + PP+G+  P PP  P   PG    +    
Sbjct: 677 SQHSGALFKP-PTPPVMQSQSVKPQ----ILVPPNGVVPPPPPPPPPPTPGS--AMAQLK 729

Query: 914 PGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQ 966
           P P  P        PP  P +  Q Q   Q        PPP   P P Q  P+
Sbjct: 730 PAPCAPSLPQFSAPPP--PLKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPK 780


>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
          Length = 2217

 Score = 87.8 bits (216), Expect = 5e-17
 Identities = 119/449 (26%), Positives = 170/449 (37%), Gaps = 83/449 (18%)

Query: 638  EPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQ-PGPPVVGALQPPAFTPPLGIPPP-- 694
            +PV P+ +P+P  +PP   PA     P Q+ P Q P  P+    Q P   PP+ + PP  
Sbjct: 747  QPVVPL-QPVPPHLPPYLAPASQVGAPAQLKPLQMPQAPLQPLAQVPPQMPPIPVVPPIT 805

Query: 695  ------GFGPGVP-------PPPPPPPFLRPGFNPMHLPPGFLPPGPP-PPITPPVSIPP 740
                  G  P +P       PP PPP +    F+P  + P    P PP  P  P  ++  
Sbjct: 806  PLAGIDGLPPALPDLPTATVPPVPPPQY----FSPAVILPSLAAPLPPASPALPLQAVKL 861

Query: 741  PHTP--PISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAA 798
            PH P  P+++P  TI      T   L++  P    +S     A+      +Y +A P  A
Sbjct: 862  PHPPGAPLAMPCRTIVPNAPATIPLLAVAPPGVAALSIHSAVAQL-PGQPVYPAAFPQMA 920

Query: 799  PTNLPTPP--------VTQPVSLLGTQ-GVAPGPVIGLQ--APSTGLLGARPGLIP---L 844
            PT++P  P         T P   L  Q  + P PV+  Q   P   +L  +P   P   L
Sbjct: 921  PTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQPVLPPQPTLPPQPVLPPQPTRPPQPVL 980

Query: 845  QRPPGMPP-PHLQRFPLMP--PRPMPPHMMHRGPP---PG-------PGGFA-------- 883
               P +PP P L   P +P  P P+ PH+  +  P   PG       P  +A        
Sbjct: 981  PPQPMLPPQPVLPPQPALPVRPEPLQPHLPEQAAPAATPGSQILLGHPAPYAVDVAAQVP 1040

Query: 884  ---MPPPHGMKGPFP----PHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQP---- 932
               +PP   +  P P    P  P + P     L            +     PP  P    
Sbjct: 1041 TVPVPPAAVLSPPLPEVLLPAAPELLPQFPSSLATVSASVQSVPTQTATLLPPANPPLPG 1100

Query: 933  -----QQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGR 987
                    P  Q   +P Q++Q     SQ  PP    PQ   +       SG++      
Sbjct: 1101 GPGIASPCPTVQLTVEPVQEEQ----ASQDKPP--GLPQSCESYGGSDVTSGKELSDSCE 1154

Query: 988  RSF-GNRVENDRERYGNRNDDRDNSNRDR 1015
             +F G R+E    R  +R   R  S ++R
Sbjct: 1155 GAFGGGRLEGRAARKHHRRSTRARSRQER 1183



 Score = 84.3 bits (207), Expect = 6e-16
 Identities = 105/360 (29%), Positives = 129/360 (35%), Gaps = 59/360 (16%)

Query: 639  PVSPIPKPLPVPVPPIPVPAPI-----TVPPPQVP-PHQPGPPVVGALQPPAFTPPLGIP 692
            PV  +P P   P      P P       +PPP  P P  PG P     QPP    P  +P
Sbjct: 682  PVGSVPAPACPPSLQQHFPDPAMSFAPVLPPPSTPMPTGPGQPAPPGQQPPPLAQPTPLP 741

Query: 693  PPGFGPGVPPPPPPPPFLRPGFNPMHL--PPGFLPP--GPPPPITPPVSIPPPHTP-PIS 747
                   V P  P PP L P   P      P  L P   P  P+ P   +PP   P P+ 
Sbjct: 742  QVLAPQPVVPLQPVPPHLPPYLAPASQVGAPAQLKPLQMPQAPLQPLAQVPPQMPPIPVV 801

Query: 748  IPNSTIAGIN--EDTTKDLSIGN----PIPTVVSGARGNAESGDSVKMYGSAVPPAAP-- 799
             P + +AGI+       DL        P P   S A         +    + +PPA+P  
Sbjct: 802  PPITPLAGIDGLPPALPDLPTATVPPVPPPQYFSPA-------VILPSLAAPLPPASPAL 854

Query: 800  ----TNLPTP---PVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPP 852
                  LP P   P+  P   +     A  P++ +  P    L     +  L   PG  P
Sbjct: 855  PLQAVKLPHPPGAPLAMPCRTIVPNAPATIPLLAVAPPGVAALSIHSAVAQL---PGQ-P 910

Query: 853  PHLQRFPLMPPRPMPPHMMH-----RGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMP 907
             +   FP M P  +PP   H     R  PP P   A+PP      P  P  P + P   P
Sbjct: 911  VYPAAFPQMAPTDVPPSPHHTVQNMRATPPQP---ALPPQ-----PTLPPQPVLPP--QP 960

Query: 908  GLGGPGPGPGGPEDRDGRQQP--PQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQP 965
             L    P P  P       QP  P QP   PQP  P  PQ     +P P Q   P Q  P
Sbjct: 961  TL---PPQPVLPPQPTRPPQPVLPPQPMLPPQPVLP--PQPALPVRPEPLQPHLPEQAAP 1015



 Score = 73.9 bits (180), Expect = 8e-13
 Identities = 95/349 (27%), Positives = 119/349 (34%), Gaps = 62/349 (17%)

Query: 650 PVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPF 709
           PV P  +P+      P   P  P   V     PP+       P   F P +PPP  P P 
Sbjct: 660 PVLPQSLPSLGAYQQPTAAPGLPVGSVPAPACPPSLQQHFPDPAMSFAPVLPPPSTPMP- 718

Query: 710 LRPG--FNPMHLPPGFLPPGPPPPITPPVSI-----PPPHTPPISIPNSTIAGINEDTTK 762
             PG    P   PP    P P P +  P  +      PPH PP   P S +    +   K
Sbjct: 719 TGPGQPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPVPPHLPPYLAPASQVGAPAQ--LK 776

Query: 763 DLSIGN--------------PIPTV-----VSGARGNAESGDSVKMYGSAVPPAAPTNLP 803
            L +                PIP V     ++G  G              +PPA P +LP
Sbjct: 777 PLQMPQAPLQPLAQVPPQMPPIPVVPPITPLAGIDG--------------LPPALP-DLP 821

Query: 804 T---PPVTQPVSLLGTQGVAPGPVI-GLQAPSTGLLGARP-GLIPLQRPPGMPPPHLQRF 858
           T   PPV  P      Q  +P  ++  L AP      A P   + L  PPG P     R 
Sbjct: 822 TATVPPVPPP------QYFSPAVILPSLAAPLPPASPALPLQAVKLPHPPGAPLAMPCR- 874

Query: 859 PLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGG 918
            ++P  P    ++   PP    G A    H      P  G  V P   P +      P  
Sbjct: 875 TIVPNAPATIPLLAVAPP----GVAALSIHSAVAQLP--GQPVYPAAFPQMAPTDVPPSP 928

Query: 919 PEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQ 967
                  +  P QP   PQP  P QP    Q   PP    PP   +P Q
Sbjct: 929 HHTVQNMRATPPQPALPPQPTLPPQPVLPPQPTLPPQPVLPPQPTRPPQ 977



 Score = 48.5 bits (114), Expect = 4e-05
 Identities = 81/322 (25%), Positives = 108/322 (33%), Gaps = 35/322 (10%)

Query: 150  PPTQATPNSVPAVPQLPSSDAF-AAVAQLFQT----TQGQQLQQILQTFQQPPKPQSPAL 204
            PP  A  +   AV QLP    + AA  Q+  T    +    +Q +  T  QP  P  P L
Sbjct: 891  PPGVAALSIHSAVAQLPGQPVYPAAFPQMAPTDVPPSPHHTVQNMRATPPQPALPPQPTL 950

Query: 205  DNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKK 264
                +   Q         P QP+       PP+        L  +      PE ++    
Sbjct: 951  PPQPVLPPQPTLPPQPVLPPQPTRPPQPVLPPQPMLPPQPVLPPQPALPVRPEPLQPHLP 1010

Query: 265  EDTTAVTTTAPAAAVP-PAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNM 323
            E      T      +  PAP A   AA  P    P PP A    P   +  PA  +   +
Sbjct: 1011 EQAAPAATPGSQILLGHPAPYAVDVAAQVPTV--PVPPAAVLSPPLPEVLLPAAPEL--L 1066

Query: 324  DQFQPRMM----GIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPF 379
             QF   +      +Q  P      LPP          P P  P +A P  P      +P 
Sbjct: 1067 PQFPSSLATVSASVQSVPTQTATLLPPANP-------PLPGGPGIASPC-PTVQLTVEPV 1118

Query: 380  QASFQAQNEPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRS 439
            Q    +Q++P           + Q C        SD    +  S S        R   R+
Sbjct: 1119 QEEQASQDKP---------PGLPQSC---ESYGGSDVTSGKELSDSCEGAFGGGRLEGRA 1166

Query: 440  RRSRHRRS-RSRSRDRRRHSPR 460
             R  HRRS R+RSR  R   PR
Sbjct: 1167 ARKHHRRSTRARSRQERASRPR 1188



 Score = 48.5 bits (114), Expect = 4e-05
 Identities = 61/238 (25%), Positives = 87/238 (36%), Gaps = 33/238 (13%)

Query: 618  IPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVV 677
            +P  P + V QN  A    T P   +P    +P  P+  P P   P P +PP    PP  
Sbjct: 924  VPPSPHHTV-QNMRA----TPPQPALPPQPTLPPQPVLPPQPTLPPQPVLPPQPTRPP-Q 977

Query: 678  GALQPPAFTPPLGIPPPGFGPGVPPPPPP-PPFLRPGFNPMHLPPGFLPPGPPPPITPPV 736
              L P    PP  + PP   P +P  P P  P L     P   P   +  G P P    V
Sbjct: 978  PVLPPQPMLPPQPVLPP--QPALPVRPEPLQPHLPEQAAPAATPGSQILLGHPAPYAVDV 1035

Query: 737  S--IPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAV 794
            +  +P    PP ++ +  +  +      +L     +P   S     + S  SV    + +
Sbjct: 1036 AAQVPTVPVPPAAVLSPPLPEVLLPAAPEL-----LPQFPSSLATVSASVQSVPTQTATL 1090

Query: 795  PPAAPTNLPTPPVTQPVSLLGTQGVA-PGPVIGLQAPSTGLLGARPGLIPLQRPPGMP 851
             P  P N P P         G  G+A P P + L          +       +PPG+P
Sbjct: 1091 LP--PANPPLP---------GGPGIASPCPTVQLTVEP-----VQEEQASQDKPPGLP 1132



 Score = 47.4 bits (111), Expect = 8e-05
 Identities = 71/283 (25%), Positives = 99/283 (34%), Gaps = 45/283 (15%)

Query: 128  PVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQ 187
            PVAE+         PP+ +SS PP +A+ +S P   QL S +  + +A        QQL 
Sbjct: 1317 PVAEHPAPEAPESSPPLPLSSLPP-EASQDSAPYKDQLSSKEQPSFLAS-------QQLL 1368

Query: 188  QILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLL 247
                    P  P +P   ++              T T P         P   TA      
Sbjct: 1369 SQAGPSNPPGAPPAPLAPSSPPVTALPQDGAAPATSTMPE--------PASGTA------ 1414

Query: 248  DRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAAS---------P 298
             +      P+ +    +       T     AV P      P   AP AAS         P
Sbjct: 1415 SQAGGPGTPQGLTSELETSQPLAETHEAPLAVQPLVVGLAPCTPAPEAASTRDASAPREP 1474

Query: 299  PPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPT 358
             PP AP   P  G  QPA  Q   +    P  +G        Q+P PP G        PT
Sbjct: 1475 LPPPAPEPSPHSGTPQPALGQPAPL---LPAAVG-AVSLATSQLPSPPLG--------PT 1522

Query: 359  -PPFPPMAQPVIPPTPPVQQPF-QASFQAQNEPLTQKPHQQEM 399
             PP PP A       PP +  F  ++ ++ +E L    +Q+ +
Sbjct: 1523 VPPQPPSALESDGEGPPPRVGFVDSTIKSLDEKLRTLLYQEHV 1565



 Score = 47.4 bits (111), Expect = 8e-05
 Identities = 67/258 (25%), Positives = 89/258 (34%), Gaps = 47/258 (18%)

Query: 639  PVSPIPKP-LPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFG 697
            PV+  P P  P   PP+P+ +   +PP       P    + + + P+F     +     G
Sbjct: 1317 PVAEHPAPEAPESSPPLPLSS---LPPEASQDSAPYKDQLSSKEQPSFLASQQLLSQA-G 1372

Query: 698  PGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIA--- 754
            P  PP  PP P               L P  PP    P     P T  +  P S  A   
Sbjct: 1373 PSNPPGAPPAP---------------LAPSSPPVTALPQDGAAPATSTMPEPASGTASQA 1417

Query: 755  ---GINEDTTKDLSIGNPI------PTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTP 805
               G  +  T +L    P+      P  V                 S    +AP     P
Sbjct: 1418 GGPGTPQGLTSELETSQPLAETHEAPLAVQPLVVGLAPCTPAPEAASTRDASAPREPLPP 1477

Query: 806  PVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRP 865
            P  +P    GT    P P +G  AP   LL A  G + L     +P P L   P +PP+ 
Sbjct: 1478 PAPEPSPHSGT----PQPALGQPAP---LLPAAVGAVSLATSQ-LPSPPLG--PTVPPQ- 1526

Query: 866  MPPHMMH---RGPPPGPG 880
             PP  +     GPPP  G
Sbjct: 1527 -PPSALESDGEGPPPRVG 1543



 Score = 43.9 bits (102), Expect = 9e-04
 Identities = 70/283 (24%), Positives = 87/283 (30%), Gaps = 54/283 (19%)

Query: 118 DMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQL 177
           D A G      V        G P PP     E      P      P LP+S    A    
Sbjct: 562 DKARGPPVPLQVQVTYHAQAGQPGPPEPEEPEADQHLLP------PTLPTSATSLASDST 615

Query: 178 FQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPE 237
           F + QG  +    Q+ QQ           +VM    A  A        PS  +    PP 
Sbjct: 616 FDSGQGSTVYSDSQSSQQ-----------SVMLGSLADAA--------PSPAQCVCSPPV 656

Query: 238 QKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAAS 297
            +     + L       +P A              + PA A PP+     P  A   A  
Sbjct: 657 SEGPVLPQSLPSLGAYQQPTAAPGLP-------VGSVPAPACPPSLQQHFPDPAMSFAPV 709

Query: 298 PPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLP 357
            PPP  P    G G               QP   G Q  P+    PLP    +    ++P
Sbjct: 710 LPPPSTPMP-TGPG---------------QPAPPGQQPPPLAQPTPLPQ--VLAPQPVVP 751

Query: 358 TPPFPPMAQPVIPPTPPVQQPFQAS----FQAQNEPLTQKPHQ 396
             P PP   P + P   V  P Q       QA  +PL Q P Q
Sbjct: 752 LQPVPPHLPPYLAPASQVGAPAQLKPLQMPQAPLQPLAQVPPQ 794



 Score = 43.5 bits (101), Expect = 0.001
 Identities = 62/245 (25%), Positives = 84/245 (34%), Gaps = 38/245 (15%)

Query: 191 QTFQQPPKPQSPALDNAVMAQVQAITAQL-KTTPTQPSEQKAAFPPPEQKTAFDKKLLDR 249
           Q    P K + P +   V     A   Q     P +P   +   PP    +A        
Sbjct: 556 QDVGSPDKARGPPVPLQVQVTYHAQAGQPGPPEPEEPEADQHLLPPTLPTSATSLASDST 615

Query: 250 FD-------YDDEPEAVEESKKEDTTAVTTTAPAAAV--PPAPTATVPAAAAPAAASPPP 300
           FD       Y D  ++ ++S    + A    +PA  V  PP     V   + P+  +   
Sbjct: 616 FDSGQGSTVYSDS-QSSQQSVMLGSLADAAPSPAQCVCSPPVSEGPVLPQSLPSLGAYQQ 674

Query: 301 PQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPL--PPNGQMPGFGLLPT 358
           P A  G P   +  PA     ++ Q  P       DP     P+  PP+  MP     P 
Sbjct: 675 PTAAPGLPVGSVPAPACPP--SLQQHFP-------DPAMSFAPVLPPPSTPMPTGPGQPA 725

Query: 359 PPF---PPMAQP-----------VIP--PTPPVQQPFQASFQAQNEPLTQKPHQQEMEVE 402
           PP    PP+AQP           V+P  P PP   P+ A       P   KP Q      
Sbjct: 726 PPGQQPPPLAQPTPLPQVLAPQPVVPLQPVPPHLPPYLAPASQVGAPAQLKPLQMPQAPL 785

Query: 403 QPCIQ 407
           QP  Q
Sbjct: 786 QPLAQ 790



 Score = 41.2 bits (95), Expect = 0.006
 Identities = 51/203 (25%), Positives = 69/203 (33%), Gaps = 39/203 (19%)

Query: 606  LDSDTLNPDWKGIPKKPENEVAQNGGAET-----SHTEPVSPIPKP--LPVPVPPIPVPA 658
            L  D   P    +P+      +Q GG  T     S  E   P+ +    P+ V P+ V  
Sbjct: 1394 LPQDGAAPATSTMPEPASGTASQAGGPGTPQGLTSELETSQPLAETHEAPLAVQPLVVGL 1453

Query: 659  PITVPPPQVP-------PHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLR 711
                P P+         P +P PP       P  +P  G P P  G        P P L 
Sbjct: 1454 APCTPAPEAASTRDASAPREPLPPPA-----PEPSPHSGTPQPALGQ-------PAPLLP 1501

Query: 712  PGFNPMHLPPGFLPPGPPPPITPPVSIPPPHT---------PPISIPNSTIAGINEDTTK 762
                 + L    LP  P  P  PP    PP           P +   +STI  ++E   +
Sbjct: 1502 AAVGAVSLATSQLPSPPLGPTVPP---QPPSALESDGEGPPPRVGFVDSTIKSLDE-KLR 1557

Query: 763  DLSIGNPIPTVVSGARGNAESGD 785
             L     +PT  + A    E GD
Sbjct: 1558 TLLYQEHVPTSSASAGTPVEVGD 1580



 Score = 37.7 bits (86), Expect = 0.062
 Identities = 62/273 (22%), Positives = 79/273 (28%), Gaps = 67/273 (24%)

Query: 110  IEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSD 169
            I ++ P+  +A G     P   ++      P PP +  S  P    P+    +P  P+S 
Sbjct: 798  IPVVPPITPLA-GIDGLPPALPDLPTATVPPVPPPQYFS--PAVILPSLAAPLP--PASP 852

Query: 170  AFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNA----VMAQVQAITAQLKTTPTQ 225
            A    A       G  L    +T         P L  A        + +  AQL   P  
Sbjct: 853  ALPLQAVKLPHPPGAPLAMPCRTIVPNAPATIPLLAVAPPGVAALSIHSAVAQLPGQPVY 912

Query: 226  PSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTA 285
            P    AAFP                     P  V  S       +  T P  A+PP PT 
Sbjct: 913  P----AAFPQMA------------------PTDVPPSPHHTVQNMRATPPQPALPPQPTL 950

Query: 286  TVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLP 345
                   P    PP P  P                              Q     Q  LP
Sbjct: 951  PPQPVLPPQPTLPPQPVLP-----------------------------PQPTRPPQPVLP 981

Query: 346  PNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQP 378
            P   +P     P P  PP  QP +P  P   QP
Sbjct: 982  PQPMLP-----PQPVLPP--QPALPVRPEPLQP 1007



 Score = 32.0 bits (71), Expect = 3.4
 Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 19/127 (14%)

Query: 839 PGLIPLQRPPGMPPPHLQRFPLM---------------PPRPMPPHMMHRGPPPGPGGFA 883
           PGL   + P   PP  LQR  L+               P  P P  ++ +   PG    A
Sbjct: 55  PGLEAAEAPGPQPPQPLQRRVLLLCKTRRLIAERARGRPAAPAPAALVAQPGAPGAPADA 114

Query: 884 MPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQ 943
            P P G + P    GP      +     P  GP        R++     + +P+P   ++
Sbjct: 115 GPEPVGTQEP----GPDPIAAAVETAPAPDGGPREEAAATVRKEDEGAAEAKPEPGRTRR 170

Query: 944 PQQQQQQ 950
            + ++++
Sbjct: 171 DEPEEEE 177


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 87.0 bits (214), Expect = 9e-17
 Identities = 135/544 (24%), Positives = 170/544 (31%), Gaps = 121/544 (22%)

Query: 627  AQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQ--------------- 671
            A    + +S +   SP P    +P  P   P P ++     PP                 
Sbjct: 383  AAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGP 442

Query: 672  PGPPVVGAL------QPPAFTPPLGIPPPGFGP--------------------------- 698
            P PP  G L       P  F P  G       P                           
Sbjct: 443  PPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQ 502

Query: 699  --GVPPPPPPPPFLRP--GFNPMHLPPGFLPPG-----PPPPITPPVSIPPPHTPPISIP 749
              G   PPPP  F  P  G +  H  P  + P      P PP   P  +PPPH    S  
Sbjct: 503  HHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPP--GPAHLPPPH----SQV 556

Query: 750  NSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQ 809
            + + AG N             P V S +  ++ +           P   P   P P    
Sbjct: 557  SYSQAGPNG------------PPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYP--FP 602

Query: 810  PVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPH 869
            PV  + T       VI   A S       P       PPG PPP+ +R P        P 
Sbjct: 603  PVPTVTTSSATLSTVIATVASS-------PAGYKTASPPG-PPPYGKRAP-------SPG 647

Query: 870  MMHRGPPPG-----PGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGP-GPGGPEDRD 923
                  PPG     P  F    P G +G  PP GP     G P + GPGP  P GP    
Sbjct: 648  AYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTV-GPGPLPPAGPSGLP 706

Query: 924  GRQQPPQQPQQQPQPQAPQQPQQ-QQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQ 982
                PP  P   P   A Q  Q+  ++ + P S  PP     P     D     +     
Sbjct: 707  SLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKVVDVPSHASQSARF 766

Query: 983  ERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHR 1042
             +   R F +   +D                        S    +  DL E+ RR +  R
Sbjct: 767  NKHLDRGFNSCARSDLYFVPLEG----------------SKLAKKRADLVEKVRREAEQR 810

Query: 1043 DRERDSRDRESRREKEEARGKEKP---EVTDRAGGNKTVEPPISQVGNVDTASELEKGVS 1099
             RE   R+RE  REKE  R KE+     V     G   VE P   +G V      E G +
Sbjct: 811  AREEKEREREREREKEREREKERELERSVKLAQEGRAPVECP--SLGPVPHRPPFEPGSA 868

Query: 1100 EAAV 1103
             A V
Sbjct: 869  VATV 872



 Score = 82.8 bits (203), Expect = 2e-15
 Identities = 104/401 (25%), Positives = 133/401 (33%), Gaps = 75/401 (18%)

Query: 619 PKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITV---PPPQVPP---HQP 672
           P   EN+   + G       P  P P   P P PP   P        P P V P   H P
Sbjct: 138 PGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAP 197

Query: 673 -GPPVVGALQPPAFTPP-------------LGIPPPG----------FGP--GVPPPPPP 706
             PP     Q P   PP             L  PP G           GP  G   PPP 
Sbjct: 198 MEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPT 257

Query: 707 PPFLRPGFNPMHLPP----------GFLPPGPPP---PITPPVSIPPPHTPPISIPNSTI 753
            P           PP          G LP  PPP   P   P   PPP   P++  +++ 
Sbjct: 258 TPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASP 317

Query: 754 AGIN-EDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVS 812
            G+  +     L   + +   + G     E G ++     ++PPA+ ++ P PP+  P S
Sbjct: 318 PGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPAS-SSAPAPPMRFPYS 376

Query: 813 LLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMH 872
              +   A        + S     A   L     P   PPP        PP+   P +  
Sbjct: 377 SSSSSSAAASSSSSSSSSSASPFPASQALPSY--PHSFPPPTSLSVSNQPPKYTQPSLPS 434

Query: 873 RG------PPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQ 926
           +       PPP P G  +   +   GPFPP           G       P        +Q
Sbjct: 435 QAVWSQGPPPPPPYGRLLANSNAHPGPFPPS---------TGAQSTAHPPVSTHHHHHQQ 485

Query: 927 QPPQQPQQQPQPQAPQQPQQQQQQQ-----PPPSQQPPPTQ 962
           Q  QQ QQQ      QQ QQQQQ       PPP   P P +
Sbjct: 486 QQQQQQQQQ------QQQQQQQQHHGNSGPPPPGAFPHPLE 520



 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 96/360 (26%), Positives = 114/360 (31%), Gaps = 57/360 (15%)

Query: 657 PAPITVPPPQVPPHQPGPPVVGALQPPA-FTPPLGIPPPGFGPGVPPPPPPPPFLRPGFN 715
           PA    PPP  PP  P PP     QP A F P   + P G+   + PP            
Sbjct: 155 PARPYHPPPLFPP-SPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTS---------R 204

Query: 716 PMHLPPGFLPPGPP--PPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTV 773
               PPG  PP P   P  T  V   PP  P      S++ G N           PI   
Sbjct: 205 MFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPT-TPISVS 263

Query: 774 VSGARGNAESGDSVKMYGSAVPPAAPT---------NLPTPPVTQPVSL-------LGTQ 817
            SGA G   +       G    P+AP          NLP PP  +P++        LG Q
Sbjct: 264 SSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQ 323

Query: 818 GVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMH----- 872
            + PG +    A   G+ G  PG  P + P   P PH    P     P PP         
Sbjct: 324 PL-PGHLPSPHAMGQGMGGLPPG--PEKGPTLAPSPHSLP-PASSSAPAPPMRFPYSSSS 379

Query: 873 ------RGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGP--GPGGPEDRDG 924
                           A P P     P  PH  F  P  +     P     P  P     
Sbjct: 380 SSSAAASSSSSSSSSSASPFPASQALPSYPHS-FPPPTSLSVSNQPPKYTQPSLPSQAVW 438

Query: 925 RQQPPQQP---------QQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQ 975
            Q PP  P            P P  P    Q     P  +      QQQ QQ +   +QQ
Sbjct: 439 SQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQ 498



 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 92/404 (22%), Positives = 137/404 (33%), Gaps = 75/404 (18%)

Query: 136 NEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQ 195
           ++G PPPP        + A P   P      S+ A   V+      Q QQ QQ  Q  QQ
Sbjct: 439 SQGPPPPPPYGRLLANSNAHPGPFPPSTGAQST-AHPPVSTHHHHHQQQQQQQQQQQQQQ 497

Query: 196 -----------PPKP-------QSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPE 237
                      PP P       +  +  +A    +      L+  P  P    A  PPP 
Sbjct: 498 QQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGP----AHLPPPH 553

Query: 238 QKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAV---------TTTAPAAA---VPPAPTA 285
            + ++ +         + P     S    +T+           +  P  A    PP PT 
Sbjct: 554 SQVSYSQA------GPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTV 607

Query: 286 TVPAAA-----APAAASP-------PPPQAPFG--FPGDGMQQPAYTQHQNMDQFQPRMM 331
           T  +A      A  A+SP       PP   P+G   P  G  + A               
Sbjct: 608 TTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRT 667

Query: 332 GIQQDPMHHQVPLPPNGQMPG---FGLLPTPPFPPMAQPVIPPTP--PVQQPFQASFQAQ 386
           G          P  P    PG    G  P PP  P   P +PP P  P   P  ++ Q +
Sbjct: 668 GTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIK 727

Query: 387 NEPLT--QKPHQQEMEVEQPC----IQEVKRHMSDNRKSRS------RSASRSPKRRRSR 434
            EP    + P         P     + +V  H S + +          S +RS       
Sbjct: 728 QEPAEEYETPESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCARSDLYFVPL 787

Query: 435 SGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQK 478
            GS+  +   +R+    + RR    R+R ++ R+RE+ERE+ ++
Sbjct: 788 EGSKLAK---KRADLVEKVRREAEQRAREEKEREREREREKERE 828



 Score = 41.2 bits (95), Expect = 0.006
 Identities = 63/276 (22%), Positives = 94/276 (34%), Gaps = 43/276 (15%)

Query: 140 PPP--PVKVSSEPPTQATPNSVPAVP----QLPSSDAFAAVAQLFQTTQGQQLQQILQTF 193
           PPP  P+ VSS   + A P   P  P     LPS+   A    +              T 
Sbjct: 254 PPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHV--------------TP 299

Query: 194 QQPPKPQSPALDNAVMAQ----VQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDR 249
             PP P    L+NA  +      Q +   L + P    +     PP  +K       L  
Sbjct: 300 NLPPPPALRPLNNASASPPGLGAQPLPGHLPS-PHAMGQGMGGLPPGPEKGP----TLAP 354

Query: 250 FDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPG 309
             +   P +            ++++ ++A   + +++  ++A+P  AS   P  P  FP 
Sbjct: 355 SPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPP 414

Query: 310 D-----GMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPM 364
                   Q P YTQ        P      Q P     P PP G++         PFPP 
Sbjct: 415 PTSLSVSNQPPKYTQPS-----LPSQAVWSQGPP----PPPPYGRLLANSNAHPGPFPPS 465

Query: 365 AQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEME 400
                   PPV        Q Q +   Q+  QQ+ +
Sbjct: 466 TGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQ 501



 Score = 40.8 bits (94), Expect = 0.007
 Identities = 41/185 (22%), Positives = 63/185 (34%), Gaps = 15/185 (8%)

Query: 256 PEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQP 315
           P   ++     T    +++ A+  PP    T P       ++PPP   P   P   +  P
Sbjct: 247 PNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTP--NLPPP 304

Query: 316 AYTQHQNMDQFQPRMMGIQQDPMHHQVP---------LPPNGQMPGFGLLPTP-PFPPMA 365
              +  N     P  +G Q  P H   P         LPP G   G  L P+P   PP +
Sbjct: 305 PALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP-GPEKGPTLAPSPHSLPPAS 363

Query: 366 QPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSAS 425
                P PP++ P+ +S  +     +            P  Q +  +        S S S
Sbjct: 364 SSA--PAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVS 421

Query: 426 RSPKR 430
             P +
Sbjct: 422 NQPPK 426



 Score = 30.8 bits (68), Expect = 7.6
 Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 898 GPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQP---QAPQQPQQQQQQQPPP 954
           GP  RP   P L  P P P  P+    + +   +P     P    AP +P   +  Q PP
Sbjct: 154 GP-ARPYHPPPLFPPSPQP--PDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP 210

Query: 955 SQQPPPTQQQP 965
              PP  Q  P
Sbjct: 211 GAPPPHPQLYP 221



 Score = 30.4 bits (67), Expect = 9.9
 Identities = 44/176 (25%), Positives = 56/176 (31%), Gaps = 33/176 (18%)

Query: 219 LKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAA 278
           L   P +P      FPP  Q               D      E+  E   +VT T   A 
Sbjct: 151 LSQGPARPYHPPPLFPPSPQPP-------------DSTPRQPEASFEPHPSVTPTGYHAP 197

Query: 279 VPPAPTATVPAAAAPAAASPPPPQ------------APFGFPGDGMQQPAYTQHQNMDQF 326
           + P PT+ +    AP  A PP PQ             P G  G G        +      
Sbjct: 198 MEP-PTSRM--FQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHP 254

Query: 327 QPRM-MGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFP---PMAQPVIPPTPPVQQP 378
            P   + +         P  P     G G LP+ P P   P   P +PP PP  +P
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPP-PPALRP 309



 Score = 30.4 bits (67), Expect = 9.9
 Identities = 22/80 (27%), Positives = 28/80 (35%), Gaps = 20/80 (25%)

Query: 655 PVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGF 714
           PV  P   P P  PP +PG  V                PP  GP  P       + RP  
Sbjct: 848 PVECPSLGPVPHRPPFEPGSAVATV-------------PPYLGPDTPALRTLSEYARPHV 894

Query: 715 -------NPMHLPPGFLPPG 727
                  +P ++P G + PG
Sbjct: 895 MSPGNRNHPFYVPLGAVDPG 914


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 87.0 bits (214), Expect = 9e-17
 Identities = 135/544 (24%), Positives = 170/544 (31%), Gaps = 121/544 (22%)

Query: 627  AQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQ--------------- 671
            A    + +S +   SP P    +P  P   P P ++     PP                 
Sbjct: 383  AAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGP 442

Query: 672  PGPPVVGAL------QPPAFTPPLGIPPPGFGP--------------------------- 698
            P PP  G L       P  F P  G       P                           
Sbjct: 443  PPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQ 502

Query: 699  --GVPPPPPPPPFLRP--GFNPMHLPPGFLPPG-----PPPPITPPVSIPPPHTPPISIP 749
              G   PPPP  F  P  G +  H  P  + P      P PP   P  +PPPH    S  
Sbjct: 503  HHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPP--GPAHLPPPH----SQV 556

Query: 750  NSTIAGINEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQ 809
            + + AG N             P V S +  ++ +           P   P   P P    
Sbjct: 557  SYSQAGPNG------------PPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYP--FP 602

Query: 810  PVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPH 869
            PV  + T       VI   A S       P       PPG PPP+ +R P        P 
Sbjct: 603  PVPTVTTSSATLSTVIATVASS-------PAGYKTASPPG-PPPYGKRAP-------SPG 647

Query: 870  MMHRGPPPG-----PGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGP-GPGGPEDRD 923
                  PPG     P  F    P G +G  PP GP     G P + GPGP  P GP    
Sbjct: 648  AYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTV-GPGPLPPAGPSGLP 706

Query: 924  GRQQPPQQPQQQPQPQAPQQPQQ-QQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQ 982
                PP  P   P   A Q  Q+  ++ + P S  PP     P     D     +     
Sbjct: 707  SLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKVVDVPSHASQSARF 766

Query: 983  ERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHR 1042
             +   R F +   +D                        S    +  DL E+ RR +  R
Sbjct: 767  NKHLDRGFNSCARSDLYFVPLEG----------------SKLAKKRADLVEKVRREAEQR 810

Query: 1043 DRERDSRDRESRREKEEARGKEKP---EVTDRAGGNKTVEPPISQVGNVDTASELEKGVS 1099
             RE   R+RE  REKE  R KE+     V     G   VE P   +G V      E G +
Sbjct: 811  AREEKEREREREREKEREREKERELERSVKLAQEGRAPVECP--SLGPVPHRPPFEPGSA 868

Query: 1100 EAAV 1103
             A V
Sbjct: 869  VATV 872



 Score = 82.8 bits (203), Expect = 2e-15
 Identities = 104/401 (25%), Positives = 133/401 (33%), Gaps = 75/401 (18%)

Query: 619 PKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITV---PPPQVPP---HQP 672
           P   EN+   + G       P  P P   P P PP   P        P P V P   H P
Sbjct: 138 PGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAP 197

Query: 673 -GPPVVGALQPPAFTPP-------------LGIPPPG----------FGP--GVPPPPPP 706
             PP     Q P   PP             L  PP G           GP  G   PPP 
Sbjct: 198 MEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPT 257

Query: 707 PPFLRPGFNPMHLPP----------GFLPPGPPP---PITPPVSIPPPHTPPISIPNSTI 753
            P           PP          G LP  PPP   P   P   PPP   P++  +++ 
Sbjct: 258 TPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASP 317

Query: 754 AGIN-EDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVS 812
            G+  +     L   + +   + G     E G ++     ++PPA+ ++ P PP+  P S
Sbjct: 318 PGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPAS-SSAPAPPMRFPYS 376

Query: 813 LLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMH 872
              +   A        + S     A   L     P   PPP        PP+   P +  
Sbjct: 377 SSSSSSAAASSSSSSSSSSASPFPASQALPSY--PHSFPPPTSLSVSNQPPKYTQPSLPS 434

Query: 873 RG------PPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQ 926
           +       PPP P G  +   +   GPFPP           G       P        +Q
Sbjct: 435 QAVWSQGPPPPPPYGRLLANSNAHPGPFPPS---------TGAQSTAHPPVSTHHHHHQQ 485

Query: 927 QPPQQPQQQPQPQAPQQPQQQQQQQ-----PPPSQQPPPTQ 962
           Q  QQ QQQ      QQ QQQQQ       PPP   P P +
Sbjct: 486 QQQQQQQQQ------QQQQQQQQHHGNSGPPPPGAFPHPLE 520



 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 96/360 (26%), Positives = 114/360 (31%), Gaps = 57/360 (15%)

Query: 657 PAPITVPPPQVPPHQPGPPVVGALQPPA-FTPPLGIPPPGFGPGVPPPPPPPPFLRPGFN 715
           PA    PPP  PP  P PP     QP A F P   + P G+   + PP            
Sbjct: 155 PARPYHPPPLFPP-SPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTS---------R 204

Query: 716 PMHLPPGFLPPGPP--PPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTV 773
               PPG  PP P   P  T  V   PP  P      S++ G N           PI   
Sbjct: 205 MFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPT-TPISVS 263

Query: 774 VSGARGNAESGDSVKMYGSAVPPAAPT---------NLPTPPVTQPVSL-------LGTQ 817
            SGA G   +       G    P+AP          NLP PP  +P++        LG Q
Sbjct: 264 SSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQ 323

Query: 818 GVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMH----- 872
            + PG +    A   G+ G  PG  P + P   P PH    P     P PP         
Sbjct: 324 PL-PGHLPSPHAMGQGMGGLPPG--PEKGPTLAPSPHSLP-PASSSAPAPPMRFPYSSSS 379

Query: 873 ------RGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGP--GPGGPEDRDG 924
                           A P P     P  PH  F  P  +     P     P  P     
Sbjct: 380 SSSAAASSSSSSSSSSASPFPASQALPSYPHS-FPPPTSLSVSNQPPKYTQPSLPSQAVW 438

Query: 925 RQQPPQQP---------QQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQ 975
            Q PP  P            P P  P    Q     P  +      QQQ QQ +   +QQ
Sbjct: 439 SQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQ 498



 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 92/404 (22%), Positives = 137/404 (33%), Gaps = 75/404 (18%)

Query: 136 NEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQ 195
           ++G PPPP        + A P   P      S+ A   V+      Q QQ QQ  Q  QQ
Sbjct: 439 SQGPPPPPPYGRLLANSNAHPGPFPPSTGAQST-AHPPVSTHHHHHQQQQQQQQQQQQQQ 497

Query: 196 -----------PPKP-------QSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPE 237
                      PP P       +  +  +A    +      L+  P  P    A  PPP 
Sbjct: 498 QQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGP----AHLPPPH 553

Query: 238 QKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAV---------TTTAPAAA---VPPAPTA 285
            + ++ +         + P     S    +T+           +  P  A    PP PT 
Sbjct: 554 SQVSYSQA------GPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTV 607

Query: 286 TVPAAA-----APAAASP-------PPPQAPFG--FPGDGMQQPAYTQHQNMDQFQPRMM 331
           T  +A      A  A+SP       PP   P+G   P  G  + A               
Sbjct: 608 TTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRT 667

Query: 332 GIQQDPMHHQVPLPPNGQMPG---FGLLPTPPFPPMAQPVIPPTP--PVQQPFQASFQAQ 386
           G          P  P    PG    G  P PP  P   P +PP P  P   P  ++ Q +
Sbjct: 668 GTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIK 727

Query: 387 NEPLT--QKPHQQEMEVEQPC----IQEVKRHMSDNRKSRS------RSASRSPKRRRSR 434
            EP    + P         P     + +V  H S + +          S +RS       
Sbjct: 728 QEPAEEYETPESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCARSDLYFVPL 787

Query: 435 SGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQK 478
            GS+  +   +R+    + RR    R+R ++ R+RE+ERE+ ++
Sbjct: 788 EGSKLAK---KRADLVEKVRREAEQRAREEKEREREREREKERE 828



 Score = 41.2 bits (95), Expect = 0.006
 Identities = 63/276 (22%), Positives = 94/276 (34%), Gaps = 43/276 (15%)

Query: 140 PPP--PVKVSSEPPTQATPNSVPAVP----QLPSSDAFAAVAQLFQTTQGQQLQQILQTF 193
           PPP  P+ VSS   + A P   P  P     LPS+   A    +              T 
Sbjct: 254 PPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHV--------------TP 299

Query: 194 QQPPKPQSPALDNAVMAQ----VQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDR 249
             PP P    L+NA  +      Q +   L + P    +     PP  +K       L  
Sbjct: 300 NLPPPPALRPLNNASASPPGLGAQPLPGHLPS-PHAMGQGMGGLPPGPEKGP----TLAP 354

Query: 250 FDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPG 309
             +   P +            ++++ ++A   + +++  ++A+P  AS   P  P  FP 
Sbjct: 355 SPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPP 414

Query: 310 D-----GMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPM 364
                   Q P YTQ        P      Q P     P PP G++         PFPP 
Sbjct: 415 PTSLSVSNQPPKYTQPS-----LPSQAVWSQGPP----PPPPYGRLLANSNAHPGPFPPS 465

Query: 365 AQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEME 400
                   PPV        Q Q +   Q+  QQ+ +
Sbjct: 466 TGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQ 501



 Score = 40.8 bits (94), Expect = 0.007
 Identities = 41/185 (22%), Positives = 63/185 (34%), Gaps = 15/185 (8%)

Query: 256 PEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQP 315
           P   ++     T    +++ A+  PP    T P       ++PPP   P   P   +  P
Sbjct: 247 PNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTP--NLPPP 304

Query: 316 AYTQHQNMDQFQPRMMGIQQDPMHHQVP---------LPPNGQMPGFGLLPTP-PFPPMA 365
              +  N     P  +G Q  P H   P         LPP G   G  L P+P   PP +
Sbjct: 305 PALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP-GPEKGPTLAPSPHSLPPAS 363

Query: 366 QPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSAS 425
                P PP++ P+ +S  +     +            P  Q +  +        S S S
Sbjct: 364 SSA--PAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVS 421

Query: 426 RSPKR 430
             P +
Sbjct: 422 NQPPK 426



 Score = 30.8 bits (68), Expect = 7.6
 Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 898 GPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQP---QAPQQPQQQQQQQPPP 954
           GP  RP   P L  P P P  P+    + +   +P     P    AP +P   +  Q PP
Sbjct: 154 GP-ARPYHPPPLFPPSPQP--PDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP 210

Query: 955 SQQPPPTQQQP 965
              PP  Q  P
Sbjct: 211 GAPPPHPQLYP 221



 Score = 30.4 bits (67), Expect = 9.9
 Identities = 44/176 (25%), Positives = 56/176 (31%), Gaps = 33/176 (18%)

Query: 219 LKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAA 278
           L   P +P      FPP  Q               D      E+  E   +VT T   A 
Sbjct: 151 LSQGPARPYHPPPLFPPSPQPP-------------DSTPRQPEASFEPHPSVTPTGYHAP 197

Query: 279 VPPAPTATVPAAAAPAAASPPPPQ------------APFGFPGDGMQQPAYTQHQNMDQF 326
           + P PT+ +    AP  A PP PQ             P G  G G        +      
Sbjct: 198 MEP-PTSRM--FQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHP 254

Query: 327 QPRM-MGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFP---PMAQPVIPPTPPVQQP 378
            P   + +         P  P     G G LP+ P P   P   P +PP PP  +P
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPP-PPALRP 309



 Score = 30.4 bits (67), Expect = 9.9
 Identities = 22/80 (27%), Positives = 28/80 (35%), Gaps = 20/80 (25%)

Query: 655 PVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGF 714
           PV  P   P P  PP +PG  V                PP  GP  P       + RP  
Sbjct: 848 PVECPSLGPVPHRPPFEPGSAVATV-------------PPYLGPDTPALRTLSEYARPHV 894

Query: 715 -------NPMHLPPGFLPPG 727
                  +P ++P G + PG
Sbjct: 895 MSPGNRNHPFYVPLGAVDPG 914


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.133    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,701,427
Number of Sequences: 37866
Number of extensions: 5578235
Number of successful extensions: 135595
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 2211
Number of HSP's that attempted gapping in prelim test: 30082
Number of HSP's gapped (non-prelim): 47251
length of query: 1132
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1019
effective length of database: 13,968,660
effective search space: 14234064540
effective search space used: 14234064540
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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