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Search of human proteins with 223633959
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223633959 proline-rich acidic protein 1 isoform 1 [Homo
sapiens]
(151 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223633959 proline-rich acidic protein 1 isoform 1 [Homo sapiens] 323 4e-89
gi|223633957 proline-rich acidic protein 1 isoform 2 [Homo sapiens] 296 6e-81
gi|33457316 pleckstrin homology domain containing, family O memb... 33 0.092
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 32 0.16
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 32 0.16
gi|4502015 A-kinase anchor protein 1 precursor [Homo sapiens] 32 0.27
gi|91754185 hypothetical protein LOC254268 [Homo sapiens] 30 0.60
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 30 0.78
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 30 0.78
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 30 0.78
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 30 0.78
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 30 0.78
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 30 0.78
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 30 0.78
gi|239750425 PREDICTED: hypothetical protein XP_002347391 [Homo ... 30 1.0
gi|187281517 cytosolic phosphoenolpyruvate carboxykinase 1 [Homo... 30 1.0
gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens] 29 1.3
gi|113430055 PREDICTED: similar to cancer/testis antigen family ... 29 1.3
gi|58530845 zyxin [Homo sapiens] 29 1.3
gi|4508047 zyxin [Homo sapiens] 29 1.3
gi|21361118 DNA-damage-inducible transcript 3 [Homo sapiens] 29 1.7
gi|71274178 developing brain homeobox 1 [Homo sapiens] 29 1.7
gi|134142062 acetyl-Coenzyme A carboxylase beta [Homo sapiens] 28 2.3
gi|7657419 opticin precursor [Homo sapiens] 28 2.3
gi|20070331 oxysterol binding protein-like 9 isoform e [Homo sap... 28 2.3
gi|22547176 oxysterol binding protein-like 9 isoform f [Homo sap... 28 2.3
gi|22547173 oxysterol binding protein-like 9 isoform d [Homo sap... 28 2.3
gi|22547171 oxysterol binding protein-like 9 isoform c [Homo sap... 28 2.3
gi|22547169 oxysterol binding protein-like 9 isoform b [Homo sap... 28 2.3
gi|22547167 oxysterol binding protein-like 9 isoform a [Homo sap... 28 2.3
>gi|223633959 proline-rich acidic protein 1 isoform 1 [Homo sapiens]
Length = 151
Score = 323 bits (827), Expect = 4e-89
Identities = 151/151 (100%), Positives = 151/151 (100%)
Query: 1 MRRLLLVTSLVVVLLWEAGAVPAPKVPIKMQVKHWPSEQDPEKAWGARVVEPPEKDDQLV 60
MRRLLLVTSLVVVLLWEAGAVPAPKVPIKMQVKHWPSEQDPEKAWGARVVEPPEKDDQLV
Sbjct: 1 MRRLLLVTSLVVVLLWEAGAVPAPKVPIKMQVKHWPSEQDPEKAWGARVVEPPEKDDQLV 60
Query: 61 VLFPVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYHPPPEED 120
VLFPVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYHPPPEED
Sbjct: 61 VLFPVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYHPPPEED 120
Query: 121 QGEERPRLWVMPNHQVLLGPEEDQDHIYHPQ 151
QGEERPRLWVMPNHQVLLGPEEDQDHIYHPQ
Sbjct: 121 QGEERPRLWVMPNHQVLLGPEEDQDHIYHPQ 151
>gi|223633957 proline-rich acidic protein 1 isoform 2 [Homo sapiens]
Length = 142
Score = 296 bits (757), Expect = 6e-81
Identities = 142/151 (94%), Positives = 142/151 (94%), Gaps = 9/151 (5%)
Query: 1 MRRLLLVTSLVVVLLWEAGAVPAPKVPIKMQVKHWPSEQDPEKAWGARVVEPPEKDDQLV 60
MRRLLLVTSLVVVLLWEAGAVPAPKVPIKMQVKHWPSEQDPEKAWGARVVEPPEKDDQLV
Sbjct: 1 MRRLLLVTSLVVVLLWEAGAVPAPKVPIKMQVKHWPSEQDPEKAWGARVVEPPEKDDQLV 60
Query: 61 VLFPVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYHPPPEED 120
VLFPVQKPKLLTTEEKPR GTKAWMETEDTLGHVLSPEPDHDSLYHPPPEED
Sbjct: 61 VLFPVQKPKLLTTEEKPR---------GTKAWMETEDTLGHVLSPEPDHDSLYHPPPEED 111
Query: 121 QGEERPRLWVMPNHQVLLGPEEDQDHIYHPQ 151
QGEERPRLWVMPNHQVLLGPEEDQDHIYHPQ
Sbjct: 112 QGEERPRLWVMPNHQVLLGPEEDQDHIYHPQ 142
>gi|33457316 pleckstrin homology domain containing, family O member
2 [Homo sapiens]
Length = 490
Score = 33.1 bits (74), Expect = 0.092
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 22/89 (24%)
Query: 64 PVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDT-------------------LGHVLS 104
PV P +E +PR R P++P TK ++ E T +S
Sbjct: 183 PVFAPSNHVSEAQPRETPR-PLMPPTKPFLAPETTSPGDRVETPVGERAPTPVSASSEVS 241
Query: 105 PEPDHDSLYHPPPEEDQGEERPRLWVMPN 133
PE DS P EED G E+P V+P+
Sbjct: 242 PESQEDS--ETPAEEDSGSEQPPNSVLPD 268
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 32.3 bits (72), Expect = 0.16
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 52 PPEKDDQLVVLFPVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDS 111
PPE+ + L P + P +T P GP LP ++ + E+T + P +S
Sbjct: 1150 PPEEPPTMPPLPPEEPP--MTPPLPPEEPPEGPALPTEQSALTAENTWPTEVPSSPSEES 1207
Query: 112 LYHPPPEEDQGE 123
+ P P Q E
Sbjct: 1208 VSQPEPPVSQSE 1219
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 32.3 bits (72), Expect = 0.16
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 52 PPEKDDQLVVLFPVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDS 111
PPE+ + L P + P +T P GP LP ++ + E+T + P +S
Sbjct: 1150 PPEEPPTMPPLPPEEPP--MTPPLPPEEPPEGPALPTEQSALTAENTWPTEVPSSPSEES 1207
Query: 112 LYHPPPEEDQGE 123
+ P P Q E
Sbjct: 1208 VSQPEPPVSQSE 1219
>gi|4502015 A-kinase anchor protein 1 precursor [Homo sapiens]
Length = 903
Score = 31.6 bits (70), Expect = 0.27
Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 10/78 (12%)
Query: 17 EAGAV-----PAPKVPIKMQVKHWPSEQDPEKAWGARVVEPPEKDDQLVVLFPVQKPKLL 71
EAGAV PA K P+ ++ P V EPPEK+ V P + P LL
Sbjct: 42 EAGAVQLRADPAIKEPLPVEDVCPKVVSTPPS-----VTEPPEKELSTVSKLPAEPPALL 96
Query: 72 TTEEKPRGQGRGPILPGT 89
T R ILP T
Sbjct: 97 QTHPPCRRSESSGILPNT 114
>gi|91754185 hypothetical protein LOC254268 [Homo sapiens]
Length = 836
Score = 30.4 bits (67), Expect = 0.60
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 9/90 (10%)
Query: 35 WPSEQDPEKAWGARVVEPPEKDDQLVVLFPVQKPKLLTTEEKPRGQGRGPILPGTKAWME 94
WP EQ PE P++D + KP TT E+ GP+ G + E
Sbjct: 160 WPKEQTPELTDQLN----PKRDGE-----NSNKPGSATTTEENTSDLEGPVAAGDSSHQE 210
Query: 95 TEDTLGHVLSPEPDHDSLYHPPPEEDQGEE 124
+ L P S P++ Q E+
Sbjct: 211 NVNVLTKTKGPGDKQKSYQGQSPQKQQTEK 240
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 30.0 bits (66), Expect = 0.78
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 46 GARVVEPPEKDDQLVVLFPVQKPKLLTTEEKPR-GQGRGPILPGTKAWMETEDTLGHVLS 104
G + E + D V + V+ K+LT + P+ GQ +AW+E G+ ++
Sbjct: 603 GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQ--------LEAWLEMNP--GYEVA 652
Query: 105 PEPDHDSLYHPPPEEDQGEERPRLW---VMPNHQVLLGPEEDQDHI 147
P D + EE++ EE+P+ +P + P+ D D +
Sbjct: 653 PRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDV 698
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 30.0 bits (66), Expect = 0.78
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 46 GARVVEPPEKDDQLVVLFPVQKPKLLTTEEKPR-GQGRGPILPGTKAWMETEDTLGHVLS 104
G + E + D V + V+ K+LT + P+ GQ +AW+E G+ ++
Sbjct: 603 GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQ--------LEAWLEMNP--GYEVA 652
Query: 105 PEPDHDSLYHPPPEEDQGEERPRLW---VMPNHQVLLGPEEDQDHI 147
P D + EE++ EE+P+ +P + P+ D D +
Sbjct: 653 PRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDV 698
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 30.0 bits (66), Expect = 0.78
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 46 GARVVEPPEKDDQLVVLFPVQKPKLLTTEEKPR-GQGRGPILPGTKAWMETEDTLGHVLS 104
G + E + D V + V+ K+LT + P+ GQ +AW+E G+ ++
Sbjct: 603 GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQ--------LEAWLEMNP--GYEVA 652
Query: 105 PEPDHDSLYHPPPEEDQGEERPRLW---VMPNHQVLLGPEEDQDHI 147
P D + EE++ EE+P+ +P + P+ D D +
Sbjct: 653 PRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDV 698
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 30.0 bits (66), Expect = 0.78
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 46 GARVVEPPEKDDQLVVLFPVQKPKLLTTEEKPR-GQGRGPILPGTKAWMETEDTLGHVLS 104
G + E + D V + V+ K+LT + P+ GQ +AW+E G+ ++
Sbjct: 603 GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQ--------LEAWLEMNP--GYEVA 652
Query: 105 PEPDHDSLYHPPPEEDQGEERPRLW---VMPNHQVLLGPEEDQDHI 147
P D + EE++ EE+P+ +P + P+ D D +
Sbjct: 653 PRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDV 698
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 30.0 bits (66), Expect = 0.78
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 46 GARVVEPPEKDDQLVVLFPVQKPKLLTTEEKPR-GQGRGPILPGTKAWMETEDTLGHVLS 104
G + E + D V + V+ K+LT + P+ GQ +AW+E G+ ++
Sbjct: 603 GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQ--------LEAWLEMNP--GYEVA 652
Query: 105 PEPDHDSLYHPPPEEDQGEERPRLW---VMPNHQVLLGPEEDQDHI 147
P D + EE++ EE+P+ +P + P+ D D +
Sbjct: 653 PRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDV 698
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 30.0 bits (66), Expect = 0.78
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 46 GARVVEPPEKDDQLVVLFPVQKPKLLTTEEKPR-GQGRGPILPGTKAWMETEDTLGHVLS 104
G + E + D V + V+ K+LT + P+ GQ +AW+E G+ ++
Sbjct: 603 GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQ--------LEAWLEMNP--GYEVA 652
Query: 105 PEPDHDSLYHPPPEEDQGEERPRLW---VMPNHQVLLGPEEDQDHI 147
P D + EE++ EE+P+ +P + P+ D D +
Sbjct: 653 PRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDV 698
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 30.0 bits (66), Expect = 0.78
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 46 GARVVEPPEKDDQLVVLFPVQKPKLLTTEEKPR-GQGRGPILPGTKAWMETEDTLGHVLS 104
G + E + D V + V+ K+LT + P+ GQ +AW+E G+ ++
Sbjct: 603 GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQ--------LEAWLEMNP--GYEVA 652
Query: 105 PEPDHDSLYHPPPEEDQGEERPRLW---VMPNHQVLLGPEEDQDHI 147
P D + EE++ EE+P+ +P + P+ D D +
Sbjct: 653 PRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDV 698
>gi|239750425 PREDICTED: hypothetical protein XP_002347391 [Homo
sapiens]
Length = 341
Score = 29.6 bits (65), Expect = 1.0
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 91 AWMETEDTLGHVLSPEPDHDSLYHPPPEEDQGEE-RPRLWVMPNHQVL 137
+W D H L P+P + HP P+ED EE R R+ P VL
Sbjct: 265 SWPVYRDPASHPLLPQP----VLHPEPQEDSSEECRRRINPQPTVGVL 308
>gi|187281517 cytosolic phosphoenolpyruvate carboxykinase 1 [Homo
sapiens]
Length = 622
Score = 29.6 bits (65), Expect = 1.0
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 11 VVVLLWEAGAVPAPKVPIKMQVKHWPSEQDPEKAWGAR 48
V+V + VP PK + Q+ W SE+D EKA+ AR
Sbjct: 93 VIVTQEQRDTVPIPKTGLS-QLGRWMSEEDFEKAFNAR 129
>gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens]
Length = 4967
Score = 29.3 bits (64), Expect = 1.3
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 12/66 (18%)
Query: 77 PRGQGRGPILPG-TKAWMETEDTLGHVLSPEPDHDSLYHP---PPEEDQGEERPRLWVMP 132
PR + L G K+W+ETE+ H + D L P PPEED+G +R V P
Sbjct: 3612 PRHRAVNLFLQGYEKSWIETEE---HYFEDKLIED-LAKPGAEPPEEDEGTKR----VDP 3663
Query: 133 NHQVLL 138
HQ++L
Sbjct: 3664 LHQLIL 3669
>gi|113430055 PREDICTED: similar to cancer/testis antigen family
147, member B1 isoform 1 [Homo sapiens]
Length = 284
Score = 29.3 bits (64), Expect = 1.3
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 14 LLWEAGAVPAPKVPIKM-QVKHWPSEQDPEKAWGARVVEPPEKDD 57
LL EA VP P+VP + ++ P+E+ E+ E P K++
Sbjct: 180 LLQEAALVPEPEVPADLAEMAREPAEEPAEEELAEEAAEEPAKEE 224
>gi|58530845 zyxin [Homo sapiens]
Length = 572
Score = 29.3 bits (64), Expect = 1.3
Identities = 31/119 (26%), Positives = 44/119 (36%), Gaps = 26/119 (21%)
Query: 19 GAVPAPKVPIKMQVKHWPSEQDPEKAWGAR--------VVEPPEKDDQLVVLFPVQKPKL 70
G V APK + P + +P A GA+ + PP +D FP+ P L
Sbjct: 27 GPVVAPKPKVN---PFRPGDSEPPPAPGAQRAQMGRVGEIPPPPPED-----FPLPPPPL 78
Query: 71 LTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYH---PPPEEDQGEERP 126
+ G G P E+ P P + ++ PPPEE+ G E P
Sbjct: 79 AGDGDDAEGALGGAFPPPPPPIEES-------FPPAPLEEEIFPSPPPPPEEEGGPEAP 130
>gi|4508047 zyxin [Homo sapiens]
Length = 572
Score = 29.3 bits (64), Expect = 1.3
Identities = 31/119 (26%), Positives = 44/119 (36%), Gaps = 26/119 (21%)
Query: 19 GAVPAPKVPIKMQVKHWPSEQDPEKAWGAR--------VVEPPEKDDQLVVLFPVQKPKL 70
G V APK + P + +P A GA+ + PP +D FP+ P L
Sbjct: 27 GPVVAPKPKVN---PFRPGDSEPPPAPGAQRAQMGRVGEIPPPPPED-----FPLPPPPL 78
Query: 71 LTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYH---PPPEEDQGEERP 126
+ G G P E+ P P + ++ PPPEE+ G E P
Sbjct: 79 AGDGDDAEGALGGAFPPPPPPIEES-------FPPAPLEEEIFPSPPPPPEEEGGPEAP 130
>gi|21361118 DNA-damage-inducible transcript 3 [Homo sapiens]
Length = 169
Score = 28.9 bits (63), Expect = 1.7
Identities = 24/84 (28%), Positives = 30/84 (35%), Gaps = 15/84 (17%)
Query: 46 GARVVEPPEKDDQLVVLFPVQKPKLLT--TEEKPRGQGRGPILPGTKAWMETEDTLGHVL 103
G V PP +++ +F P L TEE+P E T
Sbjct: 35 GGTYVSPPGNEEEESKIFTTLDPASLAWLTEEEPEPA-------------EVTSTSQSPH 81
Query: 104 SPEPDHDSLYHPPPEEDQGEERPR 127
SP+ SL EEDQG R R
Sbjct: 82 SPDSSQSSLAQEEEEEDQGRTRKR 105
>gi|71274178 developing brain homeobox 1 [Homo sapiens]
Length = 382
Score = 28.9 bits (63), Expect = 1.7
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 96 EDTLGHVLSPEPDHDSLYHPPPEEDQGEERPRLWVMPNHQVLLGPEEDQDHIYHPQ 151
E TL L+P PD + P ++ EE P P+H++ D H+ P+
Sbjct: 291 EQTLPTKLNPHPDLSDVGQKGPGNEEEEEGPG---SPSHRLAYHASSDPQHLRDPR 343
>gi|134142062 acetyl-Coenzyme A carboxylase beta [Homo sapiens]
Length = 2458
Score = 28.5 bits (62), Expect = 2.3
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 73 TEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYHPPPEEDQGEERPRLWVMP 132
T+E P +GR I+ G D + S P D LY E + E P+++V
Sbjct: 1779 TQEYP--EGRDVIVIGN-------DITFRIGSFGPGEDLLYLRASEMARAEGIPKIYVAA 1829
Query: 133 NHQVLLGPEEDQDHIYH 149
N +G E+ H++H
Sbjct: 1830 NSGARIGMAEEIKHMFH 1846
>gi|7657419 opticin precursor [Homo sapiens]
Length = 332
Score = 28.5 bits (62), Expect = 2.3
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 15/122 (12%)
Query: 3 RLLLVTSLVVVLLWEAGAVPAPKVPIKMQVKHWPSEQDPEKAWGAR-VVEPPEKDDQLVV 61
RLL SL+ ++L E G P+ K + + P E D + R V P+ +++
Sbjct: 2 RLLAFLSLLALVLQETGTASLPRKERKRREEQMPREGDSFEVLPLRNDVLNPDNYGEVID 61
Query: 62 L--------FPVQKPKLL------TTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEP 107
L + Q P++ T P P P + M T G +LS +P
Sbjct: 62 LSNYEELTDYGDQLPEVKVTSLAPATSISPAKSTTAPGTPSSNPTMTRPTTAGLLLSSQP 121
Query: 108 DH 109
+H
Sbjct: 122 NH 123
>gi|20070331 oxysterol binding protein-like 9 isoform e [Homo
sapiens]
Length = 736
Score = 28.5 bits (62), Expect = 2.3
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 62 LFPVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYHPPP 117
+ P + +L +E++P GP+L TLGH +P P+ H PP
Sbjct: 221 VLPPEPVQLCKSEQRPSSLPVGPVLA----------TLGHHQTPTPNSTGSGHSPP 266
>gi|22547176 oxysterol binding protein-like 9 isoform f [Homo
sapiens]
Length = 746
Score = 28.5 bits (62), Expect = 2.3
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 62 LFPVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYHPPP 117
+ P + +L +E++P GP+L TLGH +P P+ H PP
Sbjct: 231 VLPPEPVQLCKSEQRPSSLPVGPVLA----------TLGHHQTPTPNSTGSGHSPP 276
>gi|22547173 oxysterol binding protein-like 9 isoform d [Homo
sapiens]
Length = 723
Score = 28.5 bits (62), Expect = 2.3
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 62 LFPVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYHPPP 117
+ P + +L +E++P GP+L TLGH +P P+ H PP
Sbjct: 208 VLPPEPVQLCKSEQRPSSLPVGPVLA----------TLGHHQTPTPNSTGSGHSPP 253
>gi|22547171 oxysterol binding protein-like 9 isoform c [Homo
sapiens]
Length = 626
Score = 28.5 bits (62), Expect = 2.3
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 62 LFPVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYHPPP 117
+ P + +L +E++P GP+L TLGH +P P+ H PP
Sbjct: 111 VLPPEPVQLCKSEQRPSSLPVGPVLA----------TLGHHQTPTPNSTGSGHSPP 156
>gi|22547169 oxysterol binding protein-like 9 isoform b [Homo
sapiens]
Length = 571
Score = 28.5 bits (62), Expect = 2.3
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 62 LFPVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYHPPP 117
+ P + +L +E++P GP+L TLGH +P P+ H PP
Sbjct: 56 VLPPEPVQLCKSEQRPSSLPVGPVLA----------TLGHHQTPTPNSTGSGHSPP 101
>gi|22547167 oxysterol binding protein-like 9 isoform a [Homo
sapiens]
Length = 558
Score = 28.5 bits (62), Expect = 2.3
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 62 LFPVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYHPPP 117
+ P + +L +E++P GP+L TLGH +P P+ H PP
Sbjct: 43 VLPPEPVQLCKSEQRPSSLPVGPVLA----------TLGHHQTPTPNSTGSGHSPP 88
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.137 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,374,459
Number of Sequences: 37866
Number of extensions: 495307
Number of successful extensions: 1168
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 1128
Number of HSP's gapped (non-prelim): 99
length of query: 151
length of database: 18,247,518
effective HSP length: 93
effective length of query: 58
effective length of database: 14,725,980
effective search space: 854106840
effective search space used: 854106840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.