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Search of human proteins with 223555933
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223555933 dynein, axonemal, heavy polypeptide 14 isoform 2
[Homo sapiens]
(453 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [H... 904 0.0
gi|223555933 dynein, axonemal, heavy polypeptide 14 isoform 2 [H... 904 0.0
gi|149944493 dynein, axonemal, heavy polypeptide 14 isoform 3 [H... 439 e-123
gi|194353966 dynein, axonemal, heavy polypeptide 6 [Homo sapiens] 65 1e-10
gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens] 40 0.003
gi|222144247 dynein heavy chain domain 1 isoform 2 [Homo sapiens] 40 0.003
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 40 0.004
gi|27883882 P18SRP protein [Homo sapiens] 38 0.022
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 36 0.063
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 36 0.063
gi|15149465 caldesmon 1 isoform 5 [Homo sapiens] 35 0.11
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] 35 0.11
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] 35 0.11
gi|4826657 caldesmon 1 isoform 2 [Homo sapiens] 35 0.11
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 35 0.11
gi|75677353 AAA-ATPase TOB3 [Homo sapiens] 35 0.11
gi|117938254 BCL2-associated transcription factor 1 isoform 3 [H... 33 0.41
gi|117938251 BCL2-associated transcription factor 1 isoform 2 [H... 33 0.41
gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Hom... 33 0.41
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 33 0.53
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 33 0.53
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 33 0.53
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 33 0.53
gi|226371725 FCH domain only 2 isoform b [Homo sapiens] 33 0.53
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 33 0.53
gi|104526627 triadin [Homo sapiens] 33 0.53
gi|148746195 trichohyalin [Homo sapiens] 33 0.69
gi|23308553 spermatogenesis associated 13 [Homo sapiens] 33 0.69
gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens] 33 0.69
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 32 1.2
>gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [Homo
sapiens]
Length = 4515
Score = 904 bits (2337), Expect = 0.0
Identities = 453/453 (100%), Positives = 453/453 (100%)
Query: 1 METFIPIDLTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVR 60
METFIPIDLTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVR
Sbjct: 1 METFIPIDLTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVR 60
Query: 61 TFSESLKSEKTEDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTHACPNVRKARPVSYD 120
TFSESLKSEKTEDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTHACPNVRKARPVSYD
Sbjct: 61 TFSESLKSEKTEDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTHACPNVRKARPVSYD 120
Query: 121 RTEPKDDDVIRNIIRLREKLGWQTILPQHSLKYGSSKIAIQKITLKKPLEDDGEFVYCLP 180
RTEPKDDDVIRNIIRLREKLGWQTILPQHSLKYGSSKIAIQKITLKKPLEDDGEFVYCLP
Sbjct: 121 RTEPKDDDVIRNIIRLREKLGWQTILPQHSLKYGSSKIAIQKITLKKPLEDDGEFVYCLP 180
Query: 181 RKSPKSLYNPYDLQVVSAHTAKHCKEFWVITASFISKVINIVGSVKEVELIPTLEWLSER 240
RKSPKSLYNPYDLQVVSAHTAKHCKEFWVITASFISKVINIVGSVKEVELIPTLEWLSER
Sbjct: 181 RKSPKSLYNPYDLQVVSAHTAKHCKEFWVITASFISKVINIVGSVKEVELIPTLEWLSER 240
Query: 241 RHYYLLRQFKIFSDFRMNKAFVTWKLNVKRIKTEKSRSFLYHHLFLADDLFQTCLVYIRG 300
RHYYLLRQFKIFSDFRMNKAFVTWKLNVKRIKTEKSRSFLYHHLFLADDLFQTCLVYIRG
Sbjct: 241 RHYYLLRQFKIFSDFRMNKAFVTWKLNVKRIKTEKSRSFLYHHLFLADDLFQTCLVYIRG 300
Query: 301 LCEDAINLKNYNDHENNLSAICLVKLDSSRTYSLDEFCEEQLQQATQALKQLEDIRNKAI 360
LCEDAINLKNYNDHENNLSAICLVKLDSSRTYSLDEFCEEQLQQATQALKQLEDIRNKAI
Sbjct: 301 LCEDAINLKNYNDHENNLSAICLVKLDSSRTYSLDEFCEEQLQQATQALKQLEDIRNKAI 360
Query: 361 SEMKSTFLKVAEKNEIKEYFESKLSEDDTTHFKLPKYRRLLETFFKFVMLVDYIFQELIR 420
SEMKSTFLKVAEKNEIKEYFESKLSEDDTTHFKLPKYRRLLETFFKFVMLVDYIFQELIR
Sbjct: 361 SEMKSTFLKVAEKNEIKEYFESKLSEDDTTHFKLPKYRRLLETFFKFVMLVDYIFQELIR 420
Query: 421 QLMNTAVTLLLELFNGSAGMPFSVEKKNENLIR 453
QLMNTAVTLLLELFNGSAGMPFSVEKKNENLIR
Sbjct: 421 QLMNTAVTLLLELFNGSAGMPFSVEKKNENLIR 453
>gi|223555933 dynein, axonemal, heavy polypeptide 14 isoform 2 [Homo
sapiens]
Length = 453
Score = 904 bits (2337), Expect = 0.0
Identities = 453/453 (100%), Positives = 453/453 (100%)
Query: 1 METFIPIDLTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVR 60
METFIPIDLTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVR
Sbjct: 1 METFIPIDLTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVR 60
Query: 61 TFSESLKSEKTEDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTHACPNVRKARPVSYD 120
TFSESLKSEKTEDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTHACPNVRKARPVSYD
Sbjct: 61 TFSESLKSEKTEDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTHACPNVRKARPVSYD 120
Query: 121 RTEPKDDDVIRNIIRLREKLGWQTILPQHSLKYGSSKIAIQKITLKKPLEDDGEFVYCLP 180
RTEPKDDDVIRNIIRLREKLGWQTILPQHSLKYGSSKIAIQKITLKKPLEDDGEFVYCLP
Sbjct: 121 RTEPKDDDVIRNIIRLREKLGWQTILPQHSLKYGSSKIAIQKITLKKPLEDDGEFVYCLP 180
Query: 181 RKSPKSLYNPYDLQVVSAHTAKHCKEFWVITASFISKVINIVGSVKEVELIPTLEWLSER 240
RKSPKSLYNPYDLQVVSAHTAKHCKEFWVITASFISKVINIVGSVKEVELIPTLEWLSER
Sbjct: 181 RKSPKSLYNPYDLQVVSAHTAKHCKEFWVITASFISKVINIVGSVKEVELIPTLEWLSER 240
Query: 241 RHYYLLRQFKIFSDFRMNKAFVTWKLNVKRIKTEKSRSFLYHHLFLADDLFQTCLVYIRG 300
RHYYLLRQFKIFSDFRMNKAFVTWKLNVKRIKTEKSRSFLYHHLFLADDLFQTCLVYIRG
Sbjct: 241 RHYYLLRQFKIFSDFRMNKAFVTWKLNVKRIKTEKSRSFLYHHLFLADDLFQTCLVYIRG 300
Query: 301 LCEDAINLKNYNDHENNLSAICLVKLDSSRTYSLDEFCEEQLQQATQALKQLEDIRNKAI 360
LCEDAINLKNYNDHENNLSAICLVKLDSSRTYSLDEFCEEQLQQATQALKQLEDIRNKAI
Sbjct: 301 LCEDAINLKNYNDHENNLSAICLVKLDSSRTYSLDEFCEEQLQQATQALKQLEDIRNKAI 360
Query: 361 SEMKSTFLKVAEKNEIKEYFESKLSEDDTTHFKLPKYRRLLETFFKFVMLVDYIFQELIR 420
SEMKSTFLKVAEKNEIKEYFESKLSEDDTTHFKLPKYRRLLETFFKFVMLVDYIFQELIR
Sbjct: 361 SEMKSTFLKVAEKNEIKEYFESKLSEDDTTHFKLPKYRRLLETFFKFVMLVDYIFQELIR 420
Query: 421 QLMNTAVTLLLELFNGSAGMPFSVEKKNENLIR 453
QLMNTAVTLLLELFNGSAGMPFSVEKKNENLIR
Sbjct: 421 QLMNTAVTLLLELFNGSAGMPFSVEKKNENLIR 453
>gi|149944493 dynein, axonemal, heavy polypeptide 14 isoform 3 [Homo
sapiens]
Length = 228
Score = 439 bits (1129), Expect = e-123
Identities = 217/217 (100%), Positives = 217/217 (100%)
Query: 1 METFIPIDLTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVR 60
METFIPIDLTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVR
Sbjct: 1 METFIPIDLTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVR 60
Query: 61 TFSESLKSEKTEDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTHACPNVRKARPVSYD 120
TFSESLKSEKTEDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTHACPNVRKARPVSYD
Sbjct: 61 TFSESLKSEKTEDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTHACPNVRKARPVSYD 120
Query: 121 RTEPKDDDVIRNIIRLREKLGWQTILPQHSLKYGSSKIAIQKITLKKPLEDDGEFVYCLP 180
RTEPKDDDVIRNIIRLREKLGWQTILPQHSLKYGSSKIAIQKITLKKPLEDDGEFVYCLP
Sbjct: 121 RTEPKDDDVIRNIIRLREKLGWQTILPQHSLKYGSSKIAIQKITLKKPLEDDGEFVYCLP 180
Query: 181 RKSPKSLYNPYDLQVVSAHTAKHCKEFWVITASFISK 217
RKSPKSLYNPYDLQVVSAHTAKHCKEFWVITASFISK
Sbjct: 181 RKSPKSLYNPYDLQVVSAHTAKHCKEFWVITASFISK 217
>gi|194353966 dynein, axonemal, heavy polypeptide 6 [Homo sapiens]
Length = 4158
Score = 65.5 bits (158), Expect = 1e-10
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 20/186 (10%)
Query: 175 FVYCLPRKSPKSL-YNPYDLQVVSAHTAKHCKEFWVITASFISKVINIVGSVKEVELIPT 233
F+Y +P S+ Y+ Y+L+VVS +++ I+ ++ + N +++E I
Sbjct: 201 FLYMIPAVPRSSIEYDTYNLKVVSYENINK-NDYYTISQRAVTHIYN-----EDIEFIEI 254
Query: 234 LEWLSERRHYYLLRQFKIFSDFRMNKAFVTWKLNVKRIKTEKSRSFLYHHLFLADDLFQT 293
W E ++ L + IFS FR KAF W+ NV+ K + L +LF+ + +
Sbjct: 255 DRWEQEYLYHRELTKIPIFSLFRKWKAFSVWRKNVRSKKITGCQKSLQKNLFIVNPHLRP 314
Query: 294 CLVYIRGLCEDAINLKNYNDHENNLSAICLVKLDSSRTYSLDEFCEEQLQQATQALKQLE 353
L+ I LC +LS + L ++ TY+L EF Q+ + + ++L
Sbjct: 315 ALLKINELC-------------YHLSFMGLCYIEKCHTYTLQEFKAAQVIRLAEVTERLG 361
Query: 354 DIRNKA 359
+ RN+A
Sbjct: 362 EFRNEA 367
>gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens]
Length = 4753
Score = 40.4 bits (93), Expect = 0.003
Identities = 60/281 (21%), Positives = 106/281 (37%), Gaps = 46/281 (16%)
Query: 183 SPKSLYNPYDLQVVSAHTAKHCKEFWVITASFISKVINIVGSVKEVELIPTLEWLSERRH 242
+P + PY L VV E ++ + I V + GS E + W H
Sbjct: 301 APSRYFRPYSLMVVPPDKVN--PEHYIFSPFGILHVHPVEGS----ETMTLGTW---HHH 351
Query: 243 YYLLRQFKIFSDFR---MNKAFVTWKLNVKRIKTEKSRSFLYHHLFLADDLFQTCLVYIR 299
L +Q + F+ + K+F WK NV+ + + FL +HL LA F L++I
Sbjct: 352 CVLWQQLQFIPFFKYCLLRKSFTCWKKNVRLQGLHRLQKFLENHLLLAVPHFGAGLLHIS 411
Query: 300 GLCEDAINLKNYNDHENNLSAICLVKLDSSRTYSLDEFCEEQLQQATQALKQLEDIRNKA 359
L ++ L ++ + + R Y L + ++ +AL+ L N
Sbjct: 412 RLLQE-------------LHSVSWLPQELDRCYELLDLQTALAEEKHKALRLLHRCLNLC 458
Query: 360 ISEMKSTFLKVAEKNEIKEYFESKLSEDD-------------TTHFKLPKYRRLLETFF- 405
S ++ L + +++ + ++ D H +L + + E ++
Sbjct: 459 TSILR---LVHEDTYHMQQCLQERVQNCDRIRTGQGSIYLQRVQHKQLEQKLKQAEAWWL 515
Query: 406 ---KFVMLVDY-IFQELIRQLMNTAVTLLLELFNGSAGMPF 442
KF LVDY I Q LI L + + + PF
Sbjct: 516 QLGKFARLVDYMICQSLISVLEEQITSFVANILQAPRQKPF 556
>gi|222144247 dynein heavy chain domain 1 isoform 2 [Homo sapiens]
Length = 597
Score = 40.4 bits (93), Expect = 0.003
Identities = 60/281 (21%), Positives = 106/281 (37%), Gaps = 46/281 (16%)
Query: 183 SPKSLYNPYDLQVVSAHTAKHCKEFWVITASFISKVINIVGSVKEVELIPTLEWLSERRH 242
+P + PY L VV E ++ + I V + GS E + W H
Sbjct: 301 APSRYFRPYSLMVVPPDKVN--PEHYIFSPFGILHVHPVEGS----ETMTLGTW---HHH 351
Query: 243 YYLLRQFKIFSDFR---MNKAFVTWKLNVKRIKTEKSRSFLYHHLFLADDLFQTCLVYIR 299
L +Q + F+ + K+F WK NV+ + + FL +HL LA F L++I
Sbjct: 352 CVLWQQLQFIPFFKYCLLRKSFTCWKKNVRLQGLHRLQKFLENHLLLAVPHFGAGLLHIS 411
Query: 300 GLCEDAINLKNYNDHENNLSAICLVKLDSSRTYSLDEFCEEQLQQATQALKQLEDIRNKA 359
L ++ L ++ + + R Y L + ++ +AL+ L N
Sbjct: 412 RLLQE-------------LHSVSWLPQELDRCYELLDLQTALAEEKHKALRLLHRCLNLC 458
Query: 360 ISEMKSTFLKVAEKNEIKEYFESKLSEDD-------------TTHFKLPKYRRLLETFF- 405
S ++ L + +++ + ++ D H +L + + E ++
Sbjct: 459 TSILR---LVHEDTYHMQQCLQERVQNCDRIRTGQGSIYLQRVQHKQLEQKLKQAEAWWL 515
Query: 406 ---KFVMLVDY-IFQELIRQLMNTAVTLLLELFNGSAGMPF 442
KF LVDY I Q LI L + + + PF
Sbjct: 516 QLGKFARLVDYMICQSLISVLEEQITSFVANILQAPRQKPF 556
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 40.0 bits (92), Expect = 0.004
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 10 TTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIA-EKETLEYKTVRTFSESLKS 68
T E +E ++EE K R + +EK+ E K +T+ E EKE E K R + +
Sbjct: 13 TEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEE 72
Query: 69 EKTEDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQ 104
E+ E+ E ++ E ++K K RR+K++
Sbjct: 73 EEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEE 108
>gi|27883882 P18SRP protein [Homo sapiens]
Length = 155
Score = 37.7 bits (86), Expect = 0.022
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 17/109 (15%)
Query: 8 DLTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVRTFSESLK 67
D EN+E++K + + R+ EEKK E K EK L+ K R++S S
Sbjct: 51 DSDEENEELNKLQALQEKRINEEEEKKKEKSK----------EKIKLKKKRKRSYSSSST 100
Query: 68 SEKTEDYLRESIIQQHMVSPEPASLKEKGK------SRRKKDQTHACPN 110
E T ++ Q+ E S +KGK +RKK++ + PN
Sbjct: 101 EEDTSKQKKQKY-QKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPN 148
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 36.2 bits (82), Expect = 0.063
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Query: 12 ENQEMDKEETKTKPRLLRYEEKKYEDVK---PLETQPAEIAEKETLEYKTVRTFSESLKS 68
+ +E DKE+ + K R +EK+ +D K P + A + + + R S +S
Sbjct: 449 KEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRS 508
Query: 69 EKTEDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTHACPNVRKARPVSYDRTEPKDD- 127
+T ++I ++ SP P S +K K +R+K++ H + R S ++ D
Sbjct: 509 PRTS----KTIKRKSSRSPSPRSRNKKDK-KREKERDHISERRERERSTSMRKSSNDRDG 563
Query: 128 --DVIRNIIRLREK 139
+ +N L+EK
Sbjct: 564 KEKLEKNSTSLKEK 577
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 36.2 bits (82), Expect = 0.063
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Query: 12 ENQEMDKEETKTKPRLLRYEEKKYEDVK---PLETQPAEIAEKETLEYKTVRTFSESLKS 68
+ +E DKE+ + K R +EK+ +D K P + A + + + R S +S
Sbjct: 333 KEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRS 392
Query: 69 EKTEDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTHACPNVRKARPVSYDRTEPKDD- 127
+T ++I ++ SP P S +K K +R+K++ H + R S ++ D
Sbjct: 393 PRTS----KTIKRKSSRSPSPRSRNKKDK-KREKERDHISERRERERSTSMRKSSNDRDG 447
Query: 128 --DVIRNIIRLREK 139
+ +N L+EK
Sbjct: 448 KEKLEKNSTSLKEK 461
>gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]
Length = 532
Score = 35.4 bits (80), Expect = 0.11
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 9 LTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEK-----------ETLEYK 57
L E Q +EE K LR EE+K + +E + AE AEK + +K
Sbjct: 318 LEEEEQRRKQEEADRK---LREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFK 374
Query: 58 TVRTFSESLKSEKTEDYLRESIIQQHMV-SPEPASLKEKGKSRRKKDQTHACPNVRKARP 116
SLK E+ ++L +S+ + V S A++ K SR ++ T A + A+P
Sbjct: 375 CFTPKGSSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQ-YTSAIEGTKSAKP 433
Query: 117 VSYDRTE-PKDDDVIRNIIRLREK 139
++ P + +RNI + EK
Sbjct: 434 TKPAASDLPVPAEGVRNIKSMWEK 457
>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
Length = 558
Score = 35.4 bits (80), Expect = 0.11
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 9 LTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEK-----------ETLEYK 57
L E Q +EE K LR EE+K + +E + AE AEK + +K
Sbjct: 344 LEEEEQRRKQEEADRK---LREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFK 400
Query: 58 TVRTFSESLKSEKTEDYLRESIIQQHMV-SPEPASLKEKGKSRRKKDQTHACPNVRKARP 116
SLK E+ ++L +S+ + V S A++ K SR ++ T A + A+P
Sbjct: 401 CFTPKGSSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQ-YTSAIEGTKSAKP 459
Query: 117 VSYDRTE-PKDDDVIRNIIRLREK 139
++ P + +RNI + EK
Sbjct: 460 TKPAASDLPVPAEGVRNIKSMWEK 483
>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
Length = 564
Score = 35.4 bits (80), Expect = 0.11
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 9 LTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEK-----------ETLEYK 57
L E Q +EE K LR EE+K + +E + AE AEK + +K
Sbjct: 350 LEEEEQRRKQEEADRK---LREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFK 406
Query: 58 TVRTFSESLKSEKTEDYLRESIIQQHMV-SPEPASLKEKGKSRRKKDQTHACPNVRKARP 116
SLK E+ ++L +S+ + V S A++ K SR ++ T A + A+P
Sbjct: 407 CFTPKGSSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQ-YTSAIEGTKSAKP 465
Query: 117 VSYDRTE-PKDDDVIRNIIRLREK 139
++ P + +RNI + EK
Sbjct: 466 TKPAASDLPVPAEGVRNIKSMWEK 489
>gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]
Length = 538
Score = 35.4 bits (80), Expect = 0.11
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 9 LTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEK-----------ETLEYK 57
L E Q +EE K LR EE+K + +E + AE AEK + +K
Sbjct: 324 LEEEEQRRKQEEADRK---LREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFK 380
Query: 58 TVRTFSESLKSEKTEDYLRESIIQQHMV-SPEPASLKEKGKSRRKKDQTHACPNVRKARP 116
SLK E+ ++L +S+ + V S A++ K SR ++ T A + A+P
Sbjct: 381 CFTPKGSSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQ-YTSAIEGTKSAKP 439
Query: 117 VSYDRTE-PKDDDVIRNIIRLREK 139
++ P + +RNI + EK
Sbjct: 440 TKPAASDLPVPAEGVRNIKSMWEK 463
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 35.4 bits (80), Expect = 0.11
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 9 LTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEK-----------ETLEYK 57
L E Q +EE K LR EE+K + +E + AE AEK + +K
Sbjct: 579 LEEEEQRRKQEEADRK---LREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFK 635
Query: 58 TVRTFSESLKSEKTEDYLRESIIQQHMV-SPEPASLKEKGKSRRKKDQTHACPNVRKARP 116
SLK E+ ++L +S+ + V S A++ K SR ++ T A + A+P
Sbjct: 636 CFTPKGSSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQ-YTSAIEGTKSAKP 694
Query: 117 VSYDRTE-PKDDDVIRNIIRLREK 139
++ P + +RNI + EK
Sbjct: 695 TKPAASDLPVPAEGVRNIKSMWEK 718
>gi|75677353 AAA-ATPase TOB3 [Homo sapiens]
Length = 648
Score = 35.4 bits (80), Expect = 0.11
Identities = 44/227 (19%), Positives = 92/227 (40%), Gaps = 24/227 (10%)
Query: 18 KEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVRTFSESLKSEKTEDYLRE 77
++++K K E+ K E ++ + + +ET +++ + + L ++ ED L++
Sbjct: 88 EQQSKLKEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQ 147
Query: 78 SII--QQHMVSPEPASLKEKGKSR----RKKDQTHACPNVR-KARPVSYDRTEPKDDDVI 130
+ ++++ E + K++ R R+ + H +R + + + E ++ D+I
Sbjct: 148 QQLLNEENLRKQEESVQKQEAMRRATVEREMELRHKNEMLRVETEARARAKAERENADII 207
Query: 131 RNIIRLREKLGWQTILPQHSLKYGSSKIAIQKITLKKPLEDDGEFVYCLPRKSPKSLYNP 190
R IRL+ QT+L + I L +G + R +
Sbjct: 208 REQIRLKASEHRQTVL--------------ESIRTAGTLFGEGFRAFVTDRDKVTATVAG 253
Query: 191 YDLQVVSAHTAKHCKEFWVITASFISKVINIVGSVKEVELIPTLEWL 237
L V ++AK+ +T FI + V+E I LE L
Sbjct: 254 LTLLAVGVYSAKNAT---AVTGRFIEARLGKPSLVRETSRITVLEAL 297
>gi|117938254 BCL2-associated transcription factor 1 isoform 3 [Homo
sapiens]
Length = 747
Score = 33.5 bits (75), Expect = 0.41
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 42 ETQPAEIAEKETLEYKTVRTFSESLKSEKTEDYLRESIIQQHMVSPEPASLKEKGKSRRK 101
E+ + EK +YK +++ + K ++ +D+ R S SP KE K R +
Sbjct: 543 ESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREE 602
Query: 102 KDQTH 106
+ +TH
Sbjct: 603 EFKTH 607
>gi|117938251 BCL2-associated transcription factor 1 isoform 2 [Homo
sapiens]
Length = 869
Score = 33.5 bits (75), Expect = 0.41
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 42 ETQPAEIAEKETLEYKTVRTFSESLKSEKTEDYLRESIIQQHMVSPEPASLKEKGKSRRK 101
E+ + EK +YK +++ + K ++ +D+ R S SP KE K R +
Sbjct: 714 ESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREE 773
Query: 102 KDQTH 106
+ +TH
Sbjct: 774 EFKTH 778
>gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Homo
sapiens]
Length = 920
Score = 33.5 bits (75), Expect = 0.41
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 42 ETQPAEIAEKETLEYKTVRTFSESLKSEKTEDYLRESIIQQHMVSPEPASLKEKGKSRRK 101
E+ + EK +YK +++ + K ++ +D+ R S SP KE K R +
Sbjct: 716 ESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREE 775
Query: 102 KDQTH 106
+ +TH
Sbjct: 776 EFKTH 780
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 33.1 bits (74), Expect = 0.53
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 20/135 (14%)
Query: 2 ETFIPIDLTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVRT 61
+ F+ +DL +E K KPRL+ +E +K AE+ E+ T E + +
Sbjct: 1281 DLFMRMDLDRRREEA--RNPKRKPRLMEEDELPSWIIK----DDAEV-ERLTCEEEEEKM 1333
Query: 62 FSESLKSEKTEDYLRESIIQQHMVSPEPASLKE--------KGKSRRKKDQTHACPNVRK 113
F + K DY +Q + + E +L+E K +RK+D +
Sbjct: 1334 FGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDS-----DAGS 1388
Query: 114 ARPVSYDRTEPKDDD 128
+ P + R+ KDD+
Sbjct: 1389 STPTTSTRSRDKDDE 1403
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 33.1 bits (74), Expect = 0.53
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 20/135 (14%)
Query: 2 ETFIPIDLTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVRT 61
+ F+ +DL +E K KPRL+ +E +K AE+ E+ T E + +
Sbjct: 1281 DLFMRMDLDRRREEA--RNPKRKPRLMEEDELPSWIIK----DDAEV-ERLTCEEEEEKM 1333
Query: 62 FSESLKSEKTEDYLRESIIQQHMVSPEPASLKE--------KGKSRRKKDQTHACPNVRK 113
F + K DY +Q + + E +L+E K +RK+D +
Sbjct: 1334 FGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDS-----DAGS 1388
Query: 114 ARPVSYDRTEPKDDD 128
+ P + R+ KDD+
Sbjct: 1389 STPTTSTRSRDKDDE 1403
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 33.1 bits (74), Expect = 0.53
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 20/135 (14%)
Query: 2 ETFIPIDLTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVRT 61
+ F+ +DL +E K KPRL+ +E +K AE+ E+ T E + +
Sbjct: 1314 DLFMRMDLDRRREEA--RNPKRKPRLMEEDELPSWIIK----DDAEV-ERLTCEEEEEKM 1366
Query: 62 FSESLKSEKTEDYLRESIIQQHMVSPEPASLKE--------KGKSRRKKDQTHACPNVRK 113
F + K DY +Q + + E +L+E K +RK+D +
Sbjct: 1367 FGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDS-----DAGS 1421
Query: 114 ARPVSYDRTEPKDDD 128
+ P + R+ KDD+
Sbjct: 1422 STPTTSTRSRDKDDE 1436
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 33.1 bits (74), Expect = 0.53
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 20/135 (14%)
Query: 2 ETFIPIDLTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVRT 61
+ F+ +DL +E K KPRL+ +E +K AE+ E+ T E + +
Sbjct: 1314 DLFMRMDLDRRREEA--RNPKRKPRLMEEDELPSWIIK----DDAEV-ERLTCEEEEEKM 1366
Query: 62 FSESLKSEKTEDYLRESIIQQHMVSPEPASLKE--------KGKSRRKKDQTHACPNVRK 113
F + K DY +Q + + E +L+E K +RK+D +
Sbjct: 1367 FGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDS-----DAGS 1421
Query: 114 ARPVSYDRTEPKDDD 128
+ P + R+ KDD+
Sbjct: 1422 STPTTSTRSRDKDDE 1436
>gi|226371725 FCH domain only 2 isoform b [Homo sapiens]
Length = 777
Score = 33.1 bits (74), Expect = 0.53
Identities = 24/100 (24%), Positives = 43/100 (43%)
Query: 340 EQLQQATQALKQLEDIRNKAISEMKSTFLKVAEKNEIKEYFESKLSEDDTTHFKLPKYRR 399
+ +Q TQAL++ ++ N E + + A + EI++ DT + KY
Sbjct: 127 QTIQSITQALQKSKENYNAKCVEQERLKKEGATQREIEKAAVKSKKATDTYKLYVEKYAL 186
Query: 400 LLETFFKFVMLVDYIFQELIRQLMNTAVTLLLELFNGSAG 439
F + + + +E I + NT V L++ F S G
Sbjct: 187 AKADFEQKMTETAQVHEEFINNMANTTVESLIQKFAESKG 226
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 33.1 bits (74), Expect = 0.53
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query: 18 KEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVRTFSESLKSEKTEDYLRE 77
K+ETK KP E+KK E KP + E+A+KE KT E K E+ + +++
Sbjct: 639 KKETKVKP-----EDKKEEKEKPKK----EVAKKED---KTPIKKEEKPKKEEVKKEVKK 686
Query: 78 SIIQQHMVSPEPASLKEKGKSRRKKDQTHACPNVRKARPVSYDRTEPKDD 127
I ++ P+ KE KK+ + + V + EPK +
Sbjct: 687 EIKKEEKKEPKKEVKKETPPKEVKKE-----VKKEEKKEVKKEEKEPKKE 731
Score = 32.7 bits (73), Expect = 0.69
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
Query: 20 ETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVRTFSESLKSE---KTEDYLR 76
+T+TKP + E E+ P++ AE+AEK+ + K +++K E K ED
Sbjct: 595 KTETKPSVTEKEVPSKEEPSPVK---AEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKE 651
Query: 77 ESIIQQHMVSPEPASLKEKGKSRRKKDQTHACPNVRKARPVSYDRTEPKD 126
E P+ K++ K+ KK++ V+K + E K+
Sbjct: 652 EK------EKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKE 695
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 33.1 bits (74), Expect = 0.53
Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 10/146 (6%)
Query: 32 EKKYEDVKPLETQPAEIAEKETLEYKTVRTFSESLKSEKTEDYLRESIIQQHMVSPEPAS 91
E+ E++ + + A +KE KTV KS KT L++ + PAS
Sbjct: 427 ERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKEKSGKTSSILKDKEPIKGKEEKVPAS 486
Query: 92 LKEKGKSRRKKDQTHACPNVRKARPVSY-----DRTEPKDDDVIRNIIRLREKLGWQTIL 146
LKEK +K ++ K +P ++ EP+ + I + ++ Q I+
Sbjct: 487 LKEKEPETKKDEKMSKAGKEVKPKPPQLQGKKEEKPEPQIKKEAKPAISEKVQIHKQDIV 546
Query: 147 -PQHSLKYGSSKIAIQK----ITLKK 167
P+ ++ +G + + K +T++K
Sbjct: 547 KPEKTVSHGKPEEKVLKQVKAVTIEK 572
Score = 29.6 bits (65), Expect = 5.9
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 11 TENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQ-PAEIAEKETLEYKTVRTFSESLKSE 69
T QE+ KE++ +L K E +K E + PA + EKE E K S++ K
Sbjct: 453 TVEQEIRKEKSGKTSSIL----KDKEPIKGKEEKVPASLKEKEP-ETKKDEKMSKAGKEV 507
Query: 70 KTEDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTHACPNVRKARPVSYDRTEPK 125
K + + ++ PEP KE + +K Q H V+ + VS+ + E K
Sbjct: 508 KPKPPQLQGKKEE---KPEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHGKPEEK 560
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 32.7 bits (73), Expect = 0.69
Identities = 19/97 (19%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 12 ENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVRTFSESLKSEKT 71
E Q K+E + + L EE+ + + L+ + + E+E L+ + + E ++ +
Sbjct: 1017 ERQYRKKDELQQEEEQLLREER---EKRRLQERERQYREEEELQQEEEQLLGEERETRRR 1073
Query: 72 EDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTHAC 108
++ R+ ++ + E L+E+ + RR++++ C
Sbjct: 1074 QELERQYRKEEELQQEEEQLLREEPEKRRRQERERQC 1110
Score = 32.0 bits (71), Expect = 1.2
Identities = 20/95 (21%), Positives = 43/95 (45%)
Query: 12 ENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVRTFSESLKSEKT 71
E ++EE + +P+ + + E+ LE Q + ++ +Y+ F+ KS +
Sbjct: 1801 EQLRQEREEQQLRPQQRDGKYRWEEEQLQLEEQEQRLRQERDRQYRAEEQFATQEKSRRE 1860
Query: 72 EDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTH 106
E L + Q+ E +E + ++K++Q H
Sbjct: 1861 EQELWQEEEQKRRQERERKLREEHIRRQQKEEQRH 1895
Score = 30.0 bits (66), Expect = 4.5
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 12 ENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVRTFSESLKSEKT 71
E Q ++EE + + L EE++ + LE Q + E + E + +R E + ++
Sbjct: 1047 ERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQER 1106
Query: 72 EDYLRESIIQQHMVSPEPASLKEKGKSRRKKD 103
E RE ++ + E L+E+ + RR+++
Sbjct: 1107 ERQCRE---EEELQQEEEQLLREEREKRRRQE 1135
Score = 30.0 bits (66), Expect = 4.5
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 12 ENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVRTFSESLKSEKT 71
E Q ++EE + + L EE++ + LE Q E E + E + +R E + ++
Sbjct: 1107 ERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQEL 1166
Query: 72 EDYLRESIIQQHMVSPEPASLKEKGKSRRKK 102
E RE ++ + E L+E+ + RR++
Sbjct: 1167 ERQYRE---EEELQQEEEQLLREEQEKRRQE 1194
>gi|23308553 spermatogenesis associated 13 [Homo sapiens]
Length = 652
Score = 32.7 bits (73), Expect = 0.69
Identities = 26/113 (23%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 269 KRIKTEKSRSFLYHHLFLA--DDLFQTCLVYIRGLCE----DAINLKNYNDHENNLSAIC 322
K+ K+++ FL+ H ++ DL + ++Y +G + + ++L + D + NLS
Sbjct: 467 KQGKSQQRTFFLFDHQLVSCKKDLLRRDMLYYKGRLDMDEMELVDLGDGRDKDCNLSVKN 526
Query: 323 LVKLDSSRTYSLDEFCEEQLQQATQALKQLEDIRNKAISEMKSTFLKVAEKNE 375
KL S T + FC ++ + + L+ D R + + E K ++++E +
Sbjct: 527 AFKLVSRTTDEVYLFCAKKQEDKARWLQACADERRR-VQEDKEMGMEISENQK 578
>gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens]
Length = 898
Score = 32.7 bits (73), Expect = 0.69
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 9 LTTENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVRTFSESLKS 68
L ++ ++M + + RLL+ EE + E+V+ L+ AE+A ++T E K + T E LK
Sbjct: 623 LQSQCEQMKQTNINLESRLLKEEELRKEEVQTLQ---AELACRQT-EVKALSTQVEELKD 678
Query: 69 EKTEDYLRESIIQQHMVSPEPASLKEKGKSRRKKDQTHA 107
E ++H S + + K+ ++RRK DQ +
Sbjct: 679 ELVTQR------RKHASSIKDLT-KQLQQARRKLDQVES 710
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 32.0 bits (71), Expect = 1.2
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 12 ENQEMDKEETKTKPRLLRYEEKKYEDVKPLETQPAEIAEKETLEYKTVRTFSESLKSEKT 71
E +E +KE + R R EE++ E+ K ET E ++ EYK V S+K K
Sbjct: 1042 EGEEREKEGEGEENRRNREEEEE-EEGKYQETGEEENERQDGEEYKKVSKIKGSVKYGKH 1100
Query: 72 EDYLRESII--------QQHMVSPEPASLKEKGKSRRKKDQTHACPN 110
+ Y ++S+ Q+ + + L + G S KK + P+
Sbjct: 1101 KTYQKKSVTNTQGNGKEQRSKMPVQSKRLLKNGPSGSKKFWNNVLPH 1147
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,087,936
Number of Sequences: 37866
Number of extensions: 700670
Number of successful extensions: 3295
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 3151
Number of HSP's gapped (non-prelim): 234
length of query: 453
length of database: 18,247,518
effective HSP length: 106
effective length of query: 347
effective length of database: 14,233,722
effective search space: 4939101534
effective search space used: 4939101534
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.