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Search of human proteins with 223278374
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223278374 DNA cross-link repair 1A [Homo sapiens]
(1040 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223278374 DNA cross-link repair 1A [Homo sapiens] 2118 0.0
gi|12383082 DNA cross-link repair 1B (PSO2 homolog, S. cerevisia... 160 8e-39
gi|76496497 artemis protein isoform a [Homo sapiens] 96 1e-19
gi|76496501 artemis protein isoform c [Homo sapiens] 63 2e-09
gi|76496499 artemis protein isoform d [Homo sapiens] 63 2e-09
gi|76496495 artemis protein isoform b [Homo sapiens] 61 6e-09
gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens] 38 0.057
gi|17505234 nucleolar and spindle associated protein 1 isoform 2... 37 0.074
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 37 0.074
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 37 0.13
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 37 0.13
gi|67551265 transcription factor ELYS [Homo sapiens] 36 0.22
gi|156119615 myosin IXA [Homo sapiens] 35 0.28
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 35 0.28
gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Hom... 35 0.48
gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Hom... 35 0.48
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 35 0.48
gi|148747556 PIN2-interacting protein 1 [Homo sapiens] 34 0.63
gi|239755261 PREDICTED: hypothetical protein [Homo sapiens] 34 0.63
gi|239749742 PREDICTED: hypothetical protein XP_002347147 [Homo ... 34 0.63
gi|239743997 PREDICTED: hypothetical protein XP_002343013 [Homo ... 34 0.63
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 34 0.63
gi|224591430 Ly1 antibody reactive homolog [Homo sapiens] 33 1.1
gi|8923398 Ly1 antibody reactive homolog [Homo sapiens] 33 1.1
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 33 1.4
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 33 1.4
gi|193804867 nucleolar and spindle associated protein 1 isoform ... 33 1.8
gi|193804865 nucleolar and spindle associated protein 1 isoform ... 33 1.8
gi|239744074 PREDICTED: ArfGAP with GTPase domain, ankyrin repea... 33 1.8
gi|239744064 PREDICTED: ArfGAP with GTPase domain, ankyrin repea... 33 1.8
>gi|223278374 DNA cross-link repair 1A [Homo sapiens]
Length = 1040
Score = 2118 bits (5489), Expect = 0.0
Identities = 1040/1040 (100%), Positives = 1040/1040 (100%)
Query: 1 MLEDISEEDIWEYKSKRKPKRVDPNNGSKNILKSVEKATDGKYQSKRSRNRKRAAEAKEV 60
MLEDISEEDIWEYKSKRKPKRVDPNNGSKNILKSVEKATDGKYQSKRSRNRKRAAEAKEV
Sbjct: 1 MLEDISEEDIWEYKSKRKPKRVDPNNGSKNILKSVEKATDGKYQSKRSRNRKRAAEAKEV 60
Query: 61 KDHEVPLGNAGCQTSVASSQNSSCGDGIQQTQDKETTPGKLCRTQKSQHVSPKIRPVYDG 120
KDHEVPLGNAGCQTSVASSQNSSCGDGIQQTQDKETTPGKLCRTQKSQHVSPKIRPVYDG
Sbjct: 61 KDHEVPLGNAGCQTSVASSQNSSCGDGIQQTQDKETTPGKLCRTQKSQHVSPKIRPVYDG 120
Query: 121 YCPNCQMPFSSLIGQTPRWHVFECLDSPPRSETECPDGLLCTSTIPFHYKRYTHFLLAQS 180
YCPNCQMPFSSLIGQTPRWHVFECLDSPPRSETECPDGLLCTSTIPFHYKRYTHFLLAQS
Sbjct: 121 YCPNCQMPFSSLIGQTPRWHVFECLDSPPRSETECPDGLLCTSTIPFHYKRYTHFLLAQS 180
Query: 181 RAGDHPFSSPSPASGGSFSETKSGVLCSLEERWSSYQNQTDNSVSNDPLLMTQYFKKSPS 240
RAGDHPFSSPSPASGGSFSETKSGVLCSLEERWSSYQNQTDNSVSNDPLLMTQYFKKSPS
Sbjct: 181 RAGDHPFSSPSPASGGSFSETKSGVLCSLEERWSSYQNQTDNSVSNDPLLMTQYFKKSPS 240
Query: 241 LTEASEKISTHIQTSQQALQFTDFVENDKLVGVALRLANNSEHINLPLPENDFSDCEISY 300
LTEASEKISTHIQTSQQALQFTDFVENDKLVGVALRLANNSEHINLPLPENDFSDCEISY
Sbjct: 241 LTEASEKISTHIQTSQQALQFTDFVENDKLVGVALRLANNSEHINLPLPENDFSDCEISY 300
Query: 301 SPLQSDEDTHDIDEKPDDSQEQLFFTESSKDGSLEEDDDSCGFFKKRHGPLLKDQDESCP 360
SPLQSDEDTHDIDEKPDDSQEQLFFTESSKDGSLEEDDDSCGFFKKRHGPLLKDQDESCP
Sbjct: 301 SPLQSDEDTHDIDEKPDDSQEQLFFTESSKDGSLEEDDDSCGFFKKRHGPLLKDQDESCP 360
Query: 361 KVNSFLTRDKYDEGLYRFNSLNDLSQPISQNNESTLPYDLACTGGDFVLFPPALAGKLAA 420
KVNSFLTRDKYDEGLYRFNSLNDLSQPISQNNESTLPYDLACTGGDFVLFPPALAGKLAA
Sbjct: 361 KVNSFLTRDKYDEGLYRFNSLNDLSQPISQNNESTLPYDLACTGGDFVLFPPALAGKLAA 420
Query: 421 SVHQATKAKPDEPEFHSAQSNKQKQVIEESSVYNQVSLPLVKSLMLKPFESQVEGYLSSQ 480
SVHQATKAKPDEPEFHSAQSNKQKQVIEESSVYNQVSLPLVKSLMLKPFESQVEGYLSSQ
Sbjct: 421 SVHQATKAKPDEPEFHSAQSNKQKQVIEESSVYNQVSLPLVKSLMLKPFESQVEGYLSSQ 480
Query: 481 PTQNTIRKLSSENLNAKNNTNSACFCRKALEGVPVGKATILNTENLSSTPAPKYLKILPS 540
PTQNTIRKLSSENLNAKNNTNSACFCRKALEGVPVGKATILNTENLSSTPAPKYLKILPS
Sbjct: 481 PTQNTIRKLSSENLNAKNNTNSACFCRKALEGVPVGKATILNTENLSSTPAPKYLKILPS 540
Query: 541 GLKYNARHPSTKVMKQMDIGVYFGLPPKRKEEKLLGESALEGINLNPVPSPNQKRSSQCK 600
GLKYNARHPSTKVMKQMDIGVYFGLPPKRKEEKLLGESALEGINLNPVPSPNQKRSSQCK
Sbjct: 541 GLKYNARHPSTKVMKQMDIGVYFGLPPKRKEEKLLGESALEGINLNPVPSPNQKRSSQCK 600
Query: 601 RKAEKSLSDLEFDASTLHESQLSVELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTE 660
RKAEKSLSDLEFDASTLHESQLSVELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTE
Sbjct: 601 RKAEKSLSDLEFDASTLHESQLSVELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTE 660
Query: 661 SEAVNLSKVKVFTKSAHGGLQRGNKKIPESSNVGGSRKKTCPFYKKIPGTGFTVDAFQYG 720
SEAVNLSKVKVFTKSAHGGLQRGNKKIPESSNVGGSRKKTCPFYKKIPGTGFTVDAFQYG
Sbjct: 661 SEAVNLSKVKVFTKSAHGGLQRGNKKIPESSNVGGSRKKTCPFYKKIPGTGFTVDAFQYG 720
Query: 721 VVEGCTAYFLTHFHSDHYAGLSKHFTFPVYCSEITGNLLKNKLHVQEQYIHPLPLDTECI 780
VVEGCTAYFLTHFHSDHYAGLSKHFTFPVYCSEITGNLLKNKLHVQEQYIHPLPLDTECI
Sbjct: 721 VVEGCTAYFLTHFHSDHYAGLSKHFTFPVYCSEITGNLLKNKLHVQEQYIHPLPLDTECI 780
Query: 781 VNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFRADPSMERSLLADQKVHMLYLDTT 840
VNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFRADPSMERSLLADQKVHMLYLDTT
Sbjct: 781 VNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFRADPSMERSLLADQKVHMLYLDTT 840
Query: 841 YCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGM 900
YCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGM
Sbjct: 841 YCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGM 900
Query: 901 SQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFR 960
SQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFR
Sbjct: 901 SQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFR 960
Query: 961 PTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGT 1020
PTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGT
Sbjct: 961 PTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGT 1020
Query: 1021 WKSRSTMEKYFREWKLEAGY 1040
WKSRSTMEKYFREWKLEAGY
Sbjct: 1021 WKSRSTMEKYFREWKLEAGY 1040
>gi|12383082 DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae)
[Homo sapiens]
Length = 532
Score = 160 bits (404), Expect = 8e-39
Identities = 111/321 (34%), Positives = 164/321 (51%), Gaps = 37/321 (11%)
Query: 707 IPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTFPVYCSEITGNLLKNKLHVQ 766
IP T VD + +FL+H HSDH GLS + P+YCS IT +LL L V
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWARPLYCSPITAHLLHRHLQVS 65
Query: 767 EQYI--------HPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFRA 818
+Q+I H LPLD E + V LLDANHCPG+VM LF GT IL+TGDFR
Sbjct: 66 KQWIQALEVGESHVLPLD-EIGQETMTVTLLDANHCPGSVMFLFEGYFGT-ILYTGDFRY 123
Query: 819 DPSM--ERSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVC 876
PSM E +L +++H LYLD T C+P PS+QE A + + + +P +
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQE----AAHQIVQLIRKHPQHNIKI 179
Query: 877 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQ 936
G YS+GKE + +A + V +S + + +Q L + ++ T + + +H + M+
Sbjct: 180 GLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADV---FTVEEKAGRIHAVDHME 236
Query: 937 INFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSS 996
I S++ + + I + HS+ + I+ IPYS+HSS
Sbjct: 237 I----CHSNMLRWNQTHPTIAILPTSRKIHSS--------------HPDIHVIPYSDHSS 278
Query: 997 YLEMKRFVQWLKPQKIIPTVN 1017
Y E++ FV LKP +++P V+
Sbjct: 279 YSELRAFVAALKPCQVVPIVS 299
>gi|76496497 artemis protein isoform a [Homo sapiens]
Length = 692
Score = 96.3 bits (238), Expect = 1e-19
Identities = 101/336 (30%), Positives = 152/336 (45%), Gaps = 46/336 (13%)
Query: 727 AYFLTHFHSDHYAGLSK---------HFTFPVYCSEITGNLLKN--KLHVQEQYIHPLPL 775
AYFL+H H DH GL +YCS +T LL K ++ I + +
Sbjct: 28 AYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKYRFWKKRIISIEI 87
Query: 776 DTECIVNGVK----------VVLLDANHCPGAVMILFYLPNGTVILHTGDFR-ADPSMER 824
+T ++ V V LL A HCPG+VM LF NGTV L+TGDFR A R
Sbjct: 88 ETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNGTV-LYTGDFRLAQGEAAR 146
Query: 825 SLLAD-----QKVHMLYLDTTYCSPE-YTFPSQQEVIRFAINTAFEAVTLNP-HALVVCG 877
L + + +YLDTT+C P Y PS++E + + +T +P H + +
Sbjct: 147 MELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNC 206
Query: 878 TYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSL---VHLLPM 934
+ G E +F +++ LG +V ++ K N+PEI +TTD + + H
Sbjct: 207 KAAYGYEYLFTNLSEELGVQVHVN----KLDMFRNMPEILHHLTTDRNTQIHACRHPKAE 262
Query: 935 MQINFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEH 994
+ L + I++ +P+ + +R +VI +T S Y +S H
Sbjct: 263 EYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGER-SRKTNVIVRT--GESSYRACFSFH 319
Query: 995 SSYLEMKRFVQWLKPQKIIPTV-NVGTWKSRSTMEK 1029
SSY E+K F+ +L P P V VGT TM+K
Sbjct: 320 SSYSEIKDFLSYLCPVNAYPNVIPVGT-----TMDK 350
>gi|76496501 artemis protein isoform c [Homo sapiens]
Length = 572
Score = 62.8 bits (151), Expect = 2e-09
Identities = 72/243 (29%), Positives = 112/243 (46%), Gaps = 25/243 (10%)
Query: 799 MILFYLPNGTVILHTGDFR-ADPSMERSLLAD-----QKVHMLYLDTTYCSPE-YTFPSQ 851
M LF NGTV L+TGDFR A R L + + +YLDTT+C P Y PS+
Sbjct: 1 MFLFQGNNGTV-LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSR 59
Query: 852 QEVIRFAINTAFEAVTLNPHALVVCGTYSI-GKEKVFLAIADVLGSKVGMSQEKYKTLQC 910
+E + + +T +P+ +V + G E +F +++ LG +V ++ K
Sbjct: 60 EECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVN----KLDMF 115
Query: 911 LNIPEINSLITTDMCSSLV---HLLPMMQINFKGLQSHLKKCGGKYNQILAFRPTGWTHS 967
N+PEI +TTD + + H + L + I++ +P+
Sbjct: 116 RNMPEILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFG 175
Query: 968 NKFTRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTV-NVGTWKSRST 1026
+ +R +VI +T S Y +S HSSY E+K F+ +L P P V VGT T
Sbjct: 176 ER-SRKTNVIVRT--GESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNVIPVGT-----T 227
Query: 1027 MEK 1029
M+K
Sbjct: 228 MDK 230
>gi|76496499 artemis protein isoform d [Homo sapiens]
Length = 572
Score = 62.8 bits (151), Expect = 2e-09
Identities = 72/243 (29%), Positives = 112/243 (46%), Gaps = 25/243 (10%)
Query: 799 MILFYLPNGTVILHTGDFR-ADPSMERSLLAD-----QKVHMLYLDTTYCSPE-YTFPSQ 851
M LF NGTV L+TGDFR A R L + + +YLDTT+C P Y PS+
Sbjct: 1 MFLFQGNNGTV-LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSR 59
Query: 852 QEVIRFAINTAFEAVTLNPHALVVCGTYSI-GKEKVFLAIADVLGSKVGMSQEKYKTLQC 910
+E + + +T +P+ +V + G E +F +++ LG +V ++ K
Sbjct: 60 EECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVN----KLDMF 115
Query: 911 LNIPEINSLITTDMCSSLV---HLLPMMQINFKGLQSHLKKCGGKYNQILAFRPTGWTHS 967
N+PEI +TTD + + H + L + I++ +P+
Sbjct: 116 RNMPEILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFG 175
Query: 968 NKFTRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTV-NVGTWKSRST 1026
+ +R +VI +T S Y +S HSSY E+K F+ +L P P V VGT T
Sbjct: 176 ER-SRKTNVIVRT--GESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNVIPVGT-----T 227
Query: 1027 MEK 1029
M+K
Sbjct: 228 MDK 230
>gi|76496495 artemis protein isoform b [Homo sapiens]
Length = 577
Score = 60.8 bits (146), Expect = 6e-09
Identities = 71/241 (29%), Positives = 111/241 (46%), Gaps = 25/241 (10%)
Query: 801 LFYLPNGTVILHTGDFR-ADPSMERSLLAD-----QKVHMLYLDTTYCSPE-YTFPSQQE 853
LF NGTV L+TGDFR A R L + + +YLDTT+C P Y PS++E
Sbjct: 8 LFQGNNGTV-LYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREE 66
Query: 854 VIRFAINTAFEAVTLNPHALVVCGTYSI-GKEKVFLAIADVLGSKVGMSQEKYKTLQCLN 912
+ + +T +P+ +V + G E +F +++ LG +V ++ K N
Sbjct: 67 CLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVN----KLDMFRN 122
Query: 913 IPEINSLITTDMCSSLV---HLLPMMQINFKGLQSHLKKCGGKYNQILAFRPTGWTHSNK 969
+PEI +TTD + + H + L + I++ +P+ +
Sbjct: 123 MPEILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGER 182
Query: 970 FTRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTV-NVGTWKSRSTME 1028
+R +VI +T S Y +S HSSY E+K F+ +L P P V VGT TM+
Sbjct: 183 -SRKTNVIVRT--GESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNVIPVGT-----TMD 234
Query: 1029 K 1029
K
Sbjct: 235 K 235
>gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens]
Length = 1910
Score = 37.7 bits (86), Expect = 0.057
Identities = 56/299 (18%), Positives = 110/299 (36%), Gaps = 41/299 (13%)
Query: 412 PALAGKLAASVHQATKAKPDEPEFHSAQSN-----------KQKQVIEESSVYNQVSLPL 460
P L+ +S ++ P+ E ++ + K + E S Q+ +P
Sbjct: 821 PLLSVPFLSSARRSVSGSPESDELQELRTRSAKKRRKNALIRHKSIAEVSQNLRQIEIPK 880
Query: 461 VKSLMLKPFESQVEGYLSSQPTQNTIRKLSSENLNAKNNTNSACFCRKALEGVPVGKATI 520
V K S SQP ++T+++++ N N + R G+P +
Sbjct: 881 VSKRATKKENSHPAPQQPSQPVKDTVQEVTKVRRNLFNQELLSPSKRSLKRGLPRSHSVS 940
Query: 521 --------------------LNTENLSSTPAPKYL--KILPSGLKYNARHPSTKVMKQMD 558
L T++++ TP K + ++L +K + P D
Sbjct: 941 AVDGLEDKLDNFKKNKGYHKLLTKSVAETPVHKQISKRLLHRQIKGRSSDPGP------D 994
Query: 559 IGVYFGLPPKRKEEKLLGESALEGINLNPVPSPNQKRSSQCKRKAEKSLSDLEFDASTLH 618
IGV P K E L ++ ++ + S + SQ K ++ + + + D S
Sbjct: 995 IGVVEESPEKGDEISLRRSPRIKQLSFSRTHSASFYSVSQPKSRSVQRVHSFQQDKSDQR 1054
Query: 619 ESQLSVELSSERSQRQKKRCRKSNSLQEGAC--QKRSDHLINTESEAVNLSKVKVFTKS 675
E+ + S +S + ++G+ +KRS + +++E A + K KS
Sbjct: 1055 ENSPVQSIRSPKSLLFGAMSEMISPSEKGSARMKKRSRNTLDSEVPAAYQTPKKSHQKS 1113
>gi|17505234 nucleolar and spindle associated protein 1 isoform 2
[Homo sapiens]
Length = 440
Score = 37.4 bits (85), Expect = 0.074
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 17/134 (12%)
Query: 262 TDFVENDKLVGVALRLANNSEHINLPLPENDFSDCEISYSPLQSDEDTHDIDEKPDDSQE 321
T+F ++K LR +P P ++ + E + S D P + ++
Sbjct: 114 TEFQNHEKQESQDLRAT-----AKVPSPPDEHQEAENAVSSGNRDSKV------PSEGKK 162
Query: 322 QLFFTESSKDGSLEEDDDSCGFFKKRHGPLLKDQDESCPKVNSFLTRDKYDEGLYRFNSL 381
L+ ESSK G + + FKK H K+ + ++ ++ R K + NS+
Sbjct: 163 SLYTDESSKPGKNKRTAITTPNFKKLHEAHFKEME----SIDQYIERKK--KHFEEHNSM 216
Query: 382 NDLSQPISQNNEST 395
N+L QPI++ T
Sbjct: 217 NELKQPINKGGVRT 230
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 37.4 bits (85), Expect = 0.074
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 28/141 (19%)
Query: 218 NQTDNSVSNDPLLMTQYFKKSPSLTEASEKISTHIQTSQQALQFTDFVENDKLVGVALRL 277
NQT S P+L +Q +K+ S K H ++ ++ ++D +
Sbjct: 547 NQTPVMPSASPILHSQGKEKAVSNNVNPVKTQHHSHPAKSLVEQFRGTDSD------IPS 600
Query: 278 ANNSEHINLPLPENDFSDCEISYSPLQSDEDTHDIDEKPDDSQEQLFFTESSKDGSLEED 337
+ +SE N E++ D E + DE+ + DE D E +ES +GS EED
Sbjct: 601 SKDSEDSN----EDEEEDDE------EEDEEDDEDDESDDSQSESDSNSESDTEGSEEED 650
Query: 338 DDSCGFFKKRHGPLLKDQDES 358
DD KDQDES
Sbjct: 651 DDD------------KDQDES 659
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 36.6 bits (83), Expect = 0.13
Identities = 22/107 (20%), Positives = 48/107 (44%)
Query: 3 EDISEEDIWEYKSKRKPKRVDPNNGSKNILKSVEKATDGKYQSKRSRNRKRAAEAKEVKD 62
E+ +ED+ +YK D + N+ S E+ ++ K ++RSR++ R++ ++
Sbjct: 157 EEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSR 216
Query: 63 HEVPLGNAGCQTSVASSQNSSCGDGIQQTQDKETTPGKLCRTQKSQH 109
P + S + S +SS ++++ + G R+ H
Sbjct: 217 SSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSH 263
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 36.6 bits (83), Expect = 0.13
Identities = 22/107 (20%), Positives = 48/107 (44%)
Query: 3 EDISEEDIWEYKSKRKPKRVDPNNGSKNILKSVEKATDGKYQSKRSRNRKRAAEAKEVKD 62
E+ +ED+ +YK D + N+ S E+ ++ K ++RSR++ R++ ++
Sbjct: 157 EEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSR 216
Query: 63 HEVPLGNAGCQTSVASSQNSSCGDGIQQTQDKETTPGKLCRTQKSQH 109
P + S + S +SS ++++ + G R+ H
Sbjct: 217 SSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSH 263
>gi|67551265 transcription factor ELYS [Homo sapiens]
Length = 2266
Score = 35.8 bits (81), Expect = 0.22
Identities = 49/250 (19%), Positives = 101/250 (40%), Gaps = 35/250 (14%)
Query: 451 SVYNQVSLPLVKSLMLKPFESQVEGYLSSQPTQNTIRKLSSENLNAKNNTNSACFCRKAL 510
SV NQ S+ ++ L + S IRKL S NL+A NT + + +
Sbjct: 1878 SVENQESVEIINDLKVSTVTSP----------SRMIRKLRSTNLDASENTGNKQDDKSSD 1927
Query: 511 EGVPVGKATILNTENLSSTPAPKYLKILPSGLKYNARHPSTKVMKQMDIGVYFGLPPKRK 570
+ + + + +S PS ++ ++ S+++ Q + + +P KR
Sbjct: 1928 KQLRIKHVRRVRGREVS-----------PSDVREDSNLESSQLTVQAEFDM-SAIPRKRG 1975
Query: 571 EEKLLGESALEGIN-LNPVPSPNQKRSSQCKRKAEKSL----SDLEFDASTLHES----- 620
+ + S G + SP +K + +R++ ++ +++ L +S
Sbjct: 1976 RPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGKPALGKSILVPN 2035
Query: 621 -QLSVELSSERSQRQKKRCRKSNSLQEGACQKRSDHLIN--TESEAVNLSKVKVFTKSAH 677
+LS+ +SS++ +K + ++R+D + + T + L FTKS+
Sbjct: 2036 EELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSR 2095
Query: 678 GGLQRGNKKI 687
R +K I
Sbjct: 2096 SSRTRSSKAI 2105
>gi|156119615 myosin IXA [Homo sapiens]
Length = 2548
Score = 35.4 bits (80), Expect = 0.28
Identities = 84/416 (20%), Positives = 159/416 (38%), Gaps = 44/416 (10%)
Query: 180 SRAGDHPFSSPSPASGGSFSETKSGVLCSLEERWSSYQNQTDNSVSNDPLLMTQYFKKSP 239
S GD F SP +S F + + S E SS ++ D ++ + ++ P
Sbjct: 1349 SDEGDLQFPSPKISSSPKFDSRDNALSASNET--SSAEHLKDGTMKEMVVCSSESITCKP 1406
Query: 240 SLTEA--SEKISTHIQTSQQ-----------ALQFTDFVENDKLVGVALRLANNSEHINL 286
L ++ S + T QQ ++Q +EN+ G AL L N E
Sbjct: 1407 QLKDSFISNSLPTFFYIPQQDPLKTNSQLDTSIQRNKLLENEDTAGEALTLDINRETRRY 1466
Query: 287 PLPENDFSDCEISYSPLQSDEDTHDIDEKPDDSQEQLFFTESSKDGSLEEDDDSCGFFKK 346
D P + E ++ + +K E+L + + L++ ++ +
Sbjct: 1467 HCSGKD------QIVPSLNTESSNPVLKK----LEKLNTEKEERQKQLQQQNEKEMMEQI 1516
Query: 347 RHGPLLKDQDESCPKVNSFLTRDKYDEGLYR---FNSLNDLSQPISQNNESTLPYDLACT 403
R + +++ K + + + E L + S + +P S + +T
Sbjct: 1517 RQQTDILEKERKAFKT---IEKPRIGECLVAPSSYQSKQRVERPSSLLSLNTSNKGELNV 1573
Query: 404 GGDFVLFPPALAGKLAASVHQATKAKPDEPEFHSAQSNKQKQVIEESSVYNQVSLPLVKS 463
G L ALA K ++S H K +P F S Q ++E S +++ L +
Sbjct: 1574 LGSLSLKDAALAQKDSSSAHLPPKDRPVTVFFERKGSPCQSSTVKELSKTDRMGTQL--N 1631
Query: 464 LMLKPFESQVEGYLSSQPTQNTIRKLSSENLNAKNNTNSACFCRKALEGVPVGKATILNT 523
+ K +++ +PTQ+ +S++L+ + N F K +P+ LN+
Sbjct: 1632 VACKLSNNRISKREHFRPTQSYSH--NSDDLSREGNARPIFFTPKDNMSIPLVSKEALNS 1689
Query: 524 EN----LSSTPAPKYLKILPSGLKYNARHPST-----KVMKQMDIGVYFGLPPKRK 570
+N PA K +K+ G + ++ S+ K+ K M G L ++K
Sbjct: 1690 KNPQLHKEDEPAWKPVKLAGPGQRETSQRFSSVDEQAKLHKTMSQGEITKLAVRQK 1745
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 35.4 bits (80), Expect = 0.28
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 588 VPSPNQKRSSQCKRKAEKSLSDLEFDASTLHESQLSVELSS------ERSQRQKKRCRKS 641
+P K+ + + K+ S S D+ + +SQ S + S E+S+++KK+ RK+
Sbjct: 178 IPKSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKN 237
Query: 642 N--SLQEGACQKRSDHLINTESEAVNL 666
+ +E +K+S ++ESEA NL
Sbjct: 238 SRKHKKEKKKRKKSKKSASSESEAENL 264
Score = 32.0 bits (71), Expect = 3.1
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 6 SEEDIWEYKSKRKPKRVDPNNGSKNILKSVEKATDGKY---QSKRSRNRKRAAEAKEVKD 62
SE+D +YK+K K KR + SK+ KS K D K+ + KR R+R + + + VK+
Sbjct: 442 SEKDD-KYKNKVK-KRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKE 499
Query: 63 HEVPLGNAGCQTSVASSQNSS 83
E + G + S+ S
Sbjct: 500 KEKQSDSKGKDQERSRSKEKS 520
>gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Homo
sapiens]
Length = 1108
Score = 34.7 bits (78), Expect = 0.48
Identities = 56/216 (25%), Positives = 89/216 (41%), Gaps = 43/216 (19%)
Query: 411 PPALAGKLAASVHQAT---KAKPDEPEFHSAQS--------NKQKQVIEESSVYNQVSLP 459
P A A K +SV AT P +P + S N Q E S + + V+LP
Sbjct: 546 PAAEAEKPESSVSSATGDGNLSPSQPPLKNLLSLLKAYYALNAQPSAEELSKIADSVNLP 605
Query: 460 LVKSLMLKPFESQVEGYLSSQPTQNTIRKLSSENLNAKNN-----------TNSACFCRK 508
L ++ K FE G +S Q ++ + + N+ AKNN +S +
Sbjct: 606 L--DVVKKWFEKMQAGQISVQSSEPSSPEPGKVNIPAKNNDQPQSANANEPQDSTVNLQS 663
Query: 509 ALE-----GVPVGKATILNTENLSSTPAPKYLKILPS----GLKYNARHPSTK-VMKQMD 558
L+ +PVG T + SSTP+P L + S G Y A + ++ +D
Sbjct: 664 PLKMTNSPVLPVGSTT---NGSRSSTPSPSPLNLSSSRNTQGYLYTAEGAQEEPQVEPLD 720
Query: 559 IGVYFGLPPKRKEEKLLGESALEGINLNPVPSPNQK 594
+ + PK++ E LL S + + N V S ++
Sbjct: 721 LSL-----PKQQGE-LLERSTITSVYQNSVYSVQEE 750
>gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Homo
sapiens]
Length = 1124
Score = 34.7 bits (78), Expect = 0.48
Identities = 56/216 (25%), Positives = 89/216 (41%), Gaps = 43/216 (19%)
Query: 411 PPALAGKLAASVHQAT---KAKPDEPEFHSAQS--------NKQKQVIEESSVYNQVSLP 459
P A A K +SV AT P +P + S N Q E S + + V+LP
Sbjct: 562 PAAEAEKPESSVSSATGDGNLSPSQPPLKNLLSLLKAYYALNAQPSAEELSKIADSVNLP 621
Query: 460 LVKSLMLKPFESQVEGYLSSQPTQNTIRKLSSENLNAKNN-----------TNSACFCRK 508
L ++ K FE G +S Q ++ + + N+ AKNN +S +
Sbjct: 622 L--DVVKKWFEKMQAGQISVQSSEPSSPEPGKVNIPAKNNDQPQSANANEPQDSTVNLQS 679
Query: 509 ALE-----GVPVGKATILNTENLSSTPAPKYLKILPS----GLKYNARHPSTK-VMKQMD 558
L+ +PVG T + SSTP+P L + S G Y A + ++ +D
Sbjct: 680 PLKMTNSPVLPVGSTT---NGSRSSTPSPSPLNLSSSRNTQGYLYTAEGAQEEPQVEPLD 736
Query: 559 IGVYFGLPPKRKEEKLLGESALEGINLNPVPSPNQK 594
+ + PK++ E LL S + + N V S ++
Sbjct: 737 LSL-----PKQQGE-LLERSTITSVYQNSVYSVQEE 766
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 34.7 bits (78), Expect = 0.48
Identities = 139/756 (18%), Positives = 254/756 (33%), Gaps = 115/756 (15%)
Query: 6 SEEDIWEYKSKRKPKRVDPNNGSKNILKSVEKATDGKYQSKRSRNRKR---------AAE 56
S +D++E K ++KP + ++ S N S E +++ + + +RSR RK
Sbjct: 180 SIKDVFE-KKRKKPTHSEGSDSSSNSSSSSESSSESELEHERSRRRKHKRRPKVKRSKKR 238
Query: 57 AKEVKDHEVPLG---------NAGCQTSVASSQNSSCGDGIQQTQDKETTPGKLCR---- 103
KE E P + T+ S +SS + +E P R
Sbjct: 239 RKEASSSEEPRNKHAMNPKGHSERSDTNEKRSVDSSAKREKPVVRPEEIPPVPENRFLLR 298
Query: 104 ------TQKSQHVSPKIRPVYDGYCPNCQMPFSSLIGQ-TPRWHVFECLDSPPRSETECP 156
T + + P + P+ P+ + G+ T R+H +PPRS +
Sbjct: 299 RDMPVVTAEPEPKIPDVAPIVSDQKPSVSKSGRKIKGRGTIRYH------TPPRSRSCSE 352
Query: 157 DGLLCTSTIPFHYKRYTHFLLAQSRAGDHPFSSPSPASGGSFSETKSGVLCSLEERWSSY 216
+S P H+K L A +S S S L WS
Sbjct: 353 SDDDDSSETPPHWKEEMQRLRAYRPPSGEKWSKGDKLSDPCSSRWDERSLSQRSRSWSYN 412
Query: 217 QNQTDNSVSNDPLLMTQYFKKSPSLTEASEK--------ISTHIQTSQQALQFTDFVEND 268
+D S + + + KK + K H QT ++ + +E+
Sbjct: 413 GYYSDLSTARH----SGHHKKRRKEKKVKHKKKGKKQKHCRRHKQTKKRRILIPSDIESS 468
Query: 269 KLVGVALRLANNSEHINLPLPENDFSDCEISYSPLQSDEDTHDI---DEKPDDSQEQLFF 325
K ++ S C+ S S +H D D Q
Sbjct: 469 KSSTRRMK-----------------SSCDRERSSRSSSLSSHHSSKRDWSKSDKDVQSSL 511
Query: 326 TESSKDGSLEEDDD---SCGFFKKRHGPLLKDQDESCPKVNSFLTRDKYDEGLYRFNSLN 382
T SS+D + S G + R S K S K S
Sbjct: 512 THSSRDSYRSKSHSQSYSRGSSRSRTASKSSSHSRSRSKSRS---SSKSGHRKRASKSPR 568
Query: 383 DLSQPISQNNE-STLPYDLACTGGDFVLFPPALAGKLAA--------SVHQATKAKPDEP 433
+ +S+N T P + V+ P +A + KP +P
Sbjct: 569 KTASQLSENKPVKTEPLRATMAQNENVVVQPVVAENIPVIPLSDSPPPSRWKPGQKPWKP 628
Query: 434 EFHSAQSNKQK--QVIEESSVYNQVSLPLVKSLMLKPFESQVEGYLSSQPTQNTIRKLSS 491
+ Q K K ++ S Y+ ++ S S + +S+ Q+T K S
Sbjct: 629 SYERIQEMKAKTTHLLPIQSTYSLANIKETGS-----SSSYHKREKNSESDQSTYSKYSD 683
Query: 492 ENLNAKNNTNSACFCRKALEGVPVGKATILNTENLSSTPAPKYLKILPSGLKYNARHPST 551
+ + + S ++ ++ ++ + S +P+ + S KY+ +
Sbjct: 684 RSSESSPRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPSSR----SHSRNKYSDHSQCS 739
Query: 552 KVMKQMDIGVYFGLPPKRKEEKLLGESALEGINLNPVPSPNQKR----------SSQCKR 601
+ I G +R + +L ++ S ++K S C R
Sbjct: 740 RSSSYTSISSDDG---RRAKRRLRSSGKKNSVSHKKHSSSSEKTLHSKYVKGRDRSSCVR 796
Query: 602 KAEKSLSDLEFDASTLHESQLSVELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTES 661
K +S S L++ +S +S + S++ ++Q + R N ++ +++S +E
Sbjct: 797 KYSESRSSLDY-SSDSEQSSVQATQSAQEKEKQGQMERTHNKQEKNRGEEKS----KSER 851
Query: 662 EAVNLSKVKVFTKSAHGGLQRGNKKIPESSNVGGSR 697
E + SK + ++ L+ G+K P+ N GS+
Sbjct: 852 ECPH-SKKRTLKENLSDHLRNGSK--PKRKNYAGSK 884
>gi|148747556 PIN2-interacting protein 1 [Homo sapiens]
Length = 328
Score = 34.3 bits (77), Expect = 0.63
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 4 DISEEDIWEYKSKRKPKRVDPNNGSKNILKSVEKATDGKYQSKRSRNRKRAAEAKEVKDH 63
DISE + + K++ K + + ++ T+GK +R+ ++R A+ K
Sbjct: 201 DISETQVERKRGKKRNKEATGKDVESYLQPKAKRHTEGK--PERAEAQERVAKKKSAPAE 258
Query: 64 EVPLGNAGCQTSVASSQNSSCGDGIQQTQDKETT 97
E G Q+S AS+Q++ GD +Q + ++ T
Sbjct: 259 EQLRGPCWDQSSKASAQDA--GDHVQPPEGRDFT 290
>gi|239755261 PREDICTED: hypothetical protein [Homo sapiens]
Length = 133
Score = 34.3 bits (77), Expect = 0.63
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 832 VHMLYLDTTYCSPE-YTFPSQQEVIRFAINTAFEAVTLN-PHALVVCGTYSIGKEKVFLA 889
+ +YLDT C P Y PSQ+E + + +T + H + + + G E +F
Sbjct: 29 IQSVYLDTMLCDPRFYQIPSQEECLCGVLELVQSWITQSLYHVVWLNCKAAYGYEYLFTN 88
Query: 890 IADVLGSKVGMSQEKYKTLQCLNIPEINSLITTD 923
+++ LG ++ ++ K N+PEI +TTD
Sbjct: 89 LSEELGVQIHVN----KLDMFRNMPEILHHLTTD 118
>gi|239749742 PREDICTED: hypothetical protein XP_002347147 [Homo
sapiens]
Length = 133
Score = 34.3 bits (77), Expect = 0.63
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 832 VHMLYLDTTYCSPE-YTFPSQQEVIRFAINTAFEAVTLN-PHALVVCGTYSIGKEKVFLA 889
+ +YLDT C P Y PSQ+E + + +T + H + + + G E +F
Sbjct: 29 IQSVYLDTMLCDPRFYQIPSQEECLCGVLELVQSWITQSLYHVVWLNCKAAYGYEYLFTN 88
Query: 890 IADVLGSKVGMSQEKYKTLQCLNIPEINSLITTD 923
+++ LG ++ ++ K N+PEI +TTD
Sbjct: 89 LSEELGVQIHVN----KLDMFRNMPEILHHLTTD 118
>gi|239743997 PREDICTED: hypothetical protein XP_002343013 [Homo
sapiens]
Length = 133
Score = 34.3 bits (77), Expect = 0.63
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 832 VHMLYLDTTYCSPE-YTFPSQQEVIRFAINTAFEAVTLN-PHALVVCGTYSIGKEKVFLA 889
+ +YLDT C P Y PSQ+E + + +T + H + + + G E +F
Sbjct: 29 IQSVYLDTMLCDPRFYQIPSQEECLCGVLELVQSWITQSLYHVVWLNCKAAYGYEYLFTN 88
Query: 890 IADVLGSKVGMSQEKYKTLQCLNIPEINSLITTD 923
+++ LG ++ ++ K N+PEI +TTD
Sbjct: 89 LSEELGVQIHVN----KLDMFRNMPEILHHLTTD 118
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 34.3 bits (77), Expect = 0.63
Identities = 44/214 (20%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 178 AQSRAGDHPFSSPSPASGGSF---SETKSGVLCSLEERWSSYQNQTDNSVSNDPLLMTQY 234
A+ + DH + A G +ET S V+ E SS + Q +N + + L+ +
Sbjct: 2299 AEVQEEDHDVTQTEVADGDIMDGEAETDSVVIAGQPEVLSSQEMQVENELED---LIDEL 2355
Query: 235 FKKSPSLTEASEKISTHIQTSQQALQFTDFVENDKLVGVALRLANNSEHINL--PLPEND 292
++ ++ +S + Q D ++ L+ AN + +N+ P E +
Sbjct: 2356 LERDGGSGNSTIIVSRSGEDESQEDVLMDEAPSNLSQASTLQ-ANREDSMNILDPEDEEE 2414
Query: 293 FSDCEISYSPLQSDEDTHDIDEKPDDSQEQLFFTESSKDGSLEEDDDSCGFFKKRHGPLL 352
+ E S + ++D+ D +E+ ++ +E + ++G +EDDD G
Sbjct: 2415 HTQEEDSSGSNEDEDDSQDEEEEEEEDEEDDQEDDEGEEG--DEDDDDDG--------SE 2464
Query: 353 KDQDESCPKVNS-----FLTRDKYDEGLYRFNSL 381
+ DE P +N+ F D+ D+ + F+++
Sbjct: 2465 MELDEDYPDMNASPLVRFERFDREDDLIIEFDNM 2498
>gi|224591430 Ly1 antibody reactive homolog [Homo sapiens]
Length = 379
Score = 33.5 bits (75), Expect = 1.1
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 585 LNPVPSPNQKRSSQCKRKAEKSLSDLEFDASTLHESQLSVELSSERSQRQKKRCRKSNSL 644
L+PV +P+ + S++ K + + ++ + +RQKKR R+ L
Sbjct: 155 LHPVANPHAEISTKVPASKVKDAVE--------QQGEVKKNKRERKEERQKKRKREKKEL 206
Query: 645 QEGACQKRSDHLINTESEAVNLSKVKVFTKSAHGGLQRGNKKIPESSNVGGSRKK 699
K +H N+ ++ K K K L+ G +++PE++ G R K
Sbjct: 207 ------KLENHQENSRNQ-----KPKKRKKGQEADLEAGGEEVPEANGSAGKRSK 250
>gi|8923398 Ly1 antibody reactive homolog [Homo sapiens]
Length = 379
Score = 33.5 bits (75), Expect = 1.1
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 585 LNPVPSPNQKRSSQCKRKAEKSLSDLEFDASTLHESQLSVELSSERSQRQKKRCRKSNSL 644
L+PV +P+ + S++ K + + ++ + +RQKKR R+ L
Sbjct: 155 LHPVANPHAEISTKVPASKVKDAVE--------QQGEVKKNKRERKEERQKKRKREKKEL 206
Query: 645 QEGACQKRSDHLINTESEAVNLSKVKVFTKSAHGGLQRGNKKIPESSNVGGSRKK 699
K +H N+ ++ K K K L+ G +++PE++ G R K
Sbjct: 207 ------KLENHQENSRNQ-----KPKKRKKGQEADLEAGGEEVPEANGSAGKRSK 250
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 33.1 bits (74), Expect = 1.4
Identities = 46/217 (21%), Positives = 80/217 (36%), Gaps = 10/217 (4%)
Query: 180 SRAGDHPFSSPSPASGGSFSETKSGVLCSLEERWSSYQNQTDNSVSNDPLLMTQYFKKSP 239
S GD ++S G+ S++K G + S N N N+
Sbjct: 486 SSRGDASYNSDESKDNGNGSDSK-GAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGK 544
Query: 240 SLTEASEKISTHIQTSQQALQFTDFVENDKLVGVALRLANNSEHINLPLPENDFSDCEIS 299
+++S+ S+ S + +D +D ++S+ + +D SD + S
Sbjct: 545 GKSDSSDSDSSDSSNSSDSSDSSDSDSSDS--------NSSSDSDSSDSDSSDSSDSDSS 596
Query: 300 YSPLQSDE-DTHDIDEKPDDSQEQLFFTESSKDGSLEEDDDSCGFFKKRHGPLLKDQDES 358
S SD D+ D + D S ++SSK S D DS + D +S
Sbjct: 597 DSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDS 656
Query: 359 CPKVNSFLTRDKYDEGLYRFNSLNDLSQPISQNNEST 395
NS + D D +S + S S +++S+
Sbjct: 657 SDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSS 693
>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
Length = 3957
Score = 33.1 bits (74), Expect = 1.4
Identities = 59/259 (22%), Positives = 100/259 (38%), Gaps = 30/259 (11%)
Query: 241 LTEASEKISTHIQTSQQALQFTDFVENDKLVGVALRLANNSEHINLPLP---ENDFSDCE 297
+T S K+S+ ++ + Q ++ L +R+ S PLP +++ S E
Sbjct: 2653 VTSESRKVSSSSESEPELAQLKKGADSGLLPEPVIRVQPPS-----PLPSSMDSNSSPEE 2707
Query: 298 ISYSPLQSDEDTHDIDEKPDDSQEQLFFTESSKDGSLEEDDDSCGFFKKRHGPLLKDQDE 357
+ + P+ S + T ++E D+QE+ +E KD +D RH + +D
Sbjct: 2708 VQFQPVVSKQYTFKMNE---DTQEEPGKSEEEKDSESHLAED-------RHAVSTEAEDR 2757
Query: 358 SCPKVNSFLTRDKYDEGL-YRFNSLNDLSQPISQNNESTLPYDLACTGGDFVLFPPALAG 416
S K+N + K +G S + + P+S +S TG D P
Sbjct: 2758 SYDKLNRDTDQPKICDGHGCEAMSPSSSAAPVSSGLQSP-------TGDDVDEQPVIYKE 2810
Query: 417 KLAASVHQATKAKPDE-PEFHSAQSNKQKQVIEESSVYNQVSLPLVKSLMLKPFESQVEG 475
LA Q T K E E +++ + S + SLP K + +
Sbjct: 2811 SLAL---QGTHEKDTEGEELDVSRAESPQADCPSESFSSSSSLPHCLVSEGKELDEDISA 2867
Query: 476 YLSSQPTQNTIRKLSSENL 494
S Q T+ T + ENL
Sbjct: 2868 TSSIQKTEVTKTDETFENL 2886
>gi|193804867 nucleolar and spindle associated protein 1 isoform 3
[Homo sapiens]
Length = 402
Score = 32.7 bits (73), Expect = 1.8
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 18/135 (13%)
Query: 262 TDFVENDKLVGVALRLANNSEHINLPLPENDFSDCEISYSPLQSDEDTHDIDEKPDDSQE 321
T+F ++K LR +P P ++ + E + S D P + ++
Sbjct: 114 TEFQNHEKQESQDLRAT-----AKVPSPPDEHQEAENAVSSGNRDSKV------PSEGKK 162
Query: 322 QLFFTESSKDGSLEEDDDSCGFFKKRHGPLLKDQDESCPKVNSFLTRDKYDEGLYRFNSL 381
L+ ESSK G + + FKK H K+ + ++ ++ R K + NS+
Sbjct: 163 SLYTDESSKPGKNKRTAITTPNFKKLHEAHFKEME----SIDQYIERKK--KHFEEHNSM 216
Query: 382 NDL-SQPISQNNEST 395
N+L QPI++ T
Sbjct: 217 NELKQQPINKGGVRT 231
>gi|193804865 nucleolar and spindle associated protein 1 isoform 1
[Homo sapiens]
Length = 441
Score = 32.7 bits (73), Expect = 1.8
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 18/135 (13%)
Query: 262 TDFVENDKLVGVALRLANNSEHINLPLPENDFSDCEISYSPLQSDEDTHDIDEKPDDSQE 321
T+F ++K LR +P P ++ + E + S D P + ++
Sbjct: 114 TEFQNHEKQESQDLRAT-----AKVPSPPDEHQEAENAVSSGNRDSKV------PSEGKK 162
Query: 322 QLFFTESSKDGSLEEDDDSCGFFKKRHGPLLKDQDESCPKVNSFLTRDKYDEGLYRFNSL 381
L+ ESSK G + + FKK H K+ + ++ ++ R K + NS+
Sbjct: 163 SLYTDESSKPGKNKRTAITTPNFKKLHEAHFKEME----SIDQYIERKK--KHFEEHNSM 216
Query: 382 NDL-SQPISQNNEST 395
N+L QPI++ T
Sbjct: 217 NELKQQPINKGGVRT 231
>gi|239744074 PREDICTED: ArfGAP with GTPase domain, ankyrin repeat
and PH domain 9 [Homo sapiens]
Length = 684
Score = 32.7 bits (73), Expect = 1.8
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 17/109 (15%)
Query: 576 GESALEGINLNPVPSPNQKRSSQCKRKAEKSL-------SDLEFDASTLHESQLSVELSS 628
G S+ LNP PSP+ + K+K+ + F+A+T E V+
Sbjct: 380 GISSTTSPKLNPPPSPHANKKKHLKKKSTNNFMIVSATGQTWHFEATTYEERDAWVQAIQ 439
Query: 629 ERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKVFTKSAH 677
+ + C+ S S + + ++SEA+ L ++ +AH
Sbjct: 440 SQILASLQSCKSSKSKSQ----------LTSQSEAMALQSIQNMRGNAH 478
>gi|239744064 PREDICTED: ArfGAP with GTPase domain, ankyrin repeat
and PH domain 10 [Homo sapiens]
Length = 684
Score = 32.7 bits (73), Expect = 1.8
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 17/109 (15%)
Query: 576 GESALEGINLNPVPSPNQKRSSQCKRKAEKSL-------SDLEFDASTLHESQLSVELSS 628
G S+ LNP PSP+ + K+K+ + F+A+T E V+
Sbjct: 380 GISSTTSPKLNPPPSPHANKKKHLKKKSTNNFMIVSATGQTWHFEATTYEERDAWVQAIQ 439
Query: 629 ERSQRQKKRCRKSNSLQEGACQKRSDHLINTESEAVNLSKVKVFTKSAH 677
+ + C+ S S + + ++SEA+ L ++ +AH
Sbjct: 440 SQILASLQSCKSSKSKSQ----------LTSQSEAMALQSIQNMRGNAH 478
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,938,511
Number of Sequences: 37866
Number of extensions: 1994375
Number of successful extensions: 5170
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 5056
Number of HSP's gapped (non-prelim): 148
length of query: 1040
length of database: 18,247,518
effective HSP length: 112
effective length of query: 928
effective length of database: 14,006,526
effective search space: 12998056128
effective search space used: 12998056128
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.