Guide to the Human Genome
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Name: DCLRE1C Sequence: fasta or formatted (577aa) NCBI GI: 76496495
Description:

artemis protein isoform b

Referenced in:

DNases, Recombination, and DNA Repair

Other entries for this name:
alt prot [692aa] artemis protein isoform a
alt prot [572aa] artemis protein isoform d
alt prot [572aa] artemis protein isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         21           2
 C cysteine            2.4         14           2
 D aspartate           5.7         33           2
 E glutamate           8.7         50           3
 F phenylalanine       3.8         22           2
 G glycine             4.7         27           2
 H histidine           3.1         18           2
 I isoleucine          4.5         26           2
 K lysine              5.5         32           2
 L leucine             8.5         49           2
 M methionine          1.6          9           1
 N asparagine          3.6         21           2
 P proline             6.1         35           1
 Q glutamine           4.3         25           1
 R arginine            5.4         31           1
 S serine             11.6         67           3
 T threonine           6.8         39           2
 V valine              5.7         33           2
 W tryptophan          1.0          6           1
 Y tyrosine            3.3         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   artemis protein isoform b 
DCLRE1C               0.990   artemis protein isoform a 
DCLRE1C               0.990   artemis protein isoform c 
DCLRE1C               0.990   artemis protein isoform d 
LOC100293925          0.152   PREDICTED: hypothetical protein 
LOC100290461          0.152   PREDICTED: hypothetical protein XP_002347147 
LOC100289151          0.152   PREDICTED: hypothetical protein XP_002343013 
DCLRE1A               0.031   DNA cross-link repair 1A 
DCLRE1B               0.030   DNA cross-link repair 1B (PSO2 homolog, S. cerevisia...
AKAP12                0.016   A kinase (PRKA) anchor protein 12 isoform 1 
AKAP12                0.016   A kinase (PRKA) anchor protein 12 isoform 2 
SENP7                 0.012   sentrin/SUMO-specific protease 7 isoform 1 
AP3B1                 0.010   adaptor-related protein complex 3, beta 1 subunit [H...
DSPP                  0.010   dentin sialophosphoprotein preproprotein 
USP34                 0.010   ubiquitin specific protease 34 
LOC100294249          0.009   PREDICTED: hypothetical protein XP_002344067 
NFE2L1                0.009   nuclear factor erythroid 2-like 1 
AP3B2                 0.009   adaptor-related protein complex 3, beta 2 subunit [H...
LOC729792             0.009   PREDICTED: hypothetical protein 
LOC729792             0.009   PREDICTED: hypothetical protein 
LOC729792             0.009   PREDICTED: hypothetical protein 
LOC100294501          0.009   PREDICTED: hypothetical protein 
LOC100294238          0.009   PREDICTED: hypothetical protein 
LOC100294204          0.009   PREDICTED: hypothetical protein 
LOC100294136          0.009   PREDICTED: hypothetical protein 
LOC100294091          0.009   PREDICTED: hypothetical protein 
LOC730401             0.009   PREDICTED: hypothetical protein 
FAM135B               0.007   hypothetical protein LOC51059 
CHD9                  0.007   chromodomain helicase DNA binding protein 9 
SETD1A                0.006   SET domain containing 1A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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