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Search of human proteins with 222831620
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222831620 interleukin 18 binding protein isoform a precursor
[Homo sapiens]
(194 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222831620 interleukin 18 binding protein isoform a precursor ... 402 e-113
gi|89111129 interleukin 18 binding protein isoform a precursor [... 402 e-113
gi|89111125 interleukin 18 binding protein isoform a precursor [... 402 e-113
gi|89111127 interleukin 18 binding protein isoform a precursor [... 402 e-113
gi|222831607 interleukin 18 binding protein isoform b precursor ... 166 9e-42
gi|19913396 smoothelin isoform b [Homo sapiens] 37 0.014
gi|19913394 smoothelin isoform c [Homo sapiens] 37 0.014
gi|19913398 smoothelin isoform a [Homo sapiens] 37 0.014
gi|11225607 interleukin 1 receptor accessory protein-like 2 [Hom... 35 0.031
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 33 0.15
gi|75709198 nephronectin [Homo sapiens] 32 0.26
gi|148727255 microtubule associated serine/threonine kinase fami... 31 0.58
gi|44662821 LRRN4 C-terminal like [Homo sapiens] 31 0.76
gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo sa... 30 1.7
gi|169214031 PREDICTED: hypothetical LOC646508 [Homo sapiens] 29 2.9
gi|239751865 PREDICTED: hypothetical LOC646508 [Homo sapiens] 29 2.9
gi|169213419 PREDICTED: hypothetical LOC646508 [Homo sapiens] 29 2.9
gi|153792110 HEG homolog 1 [Homo sapiens] 29 2.9
gi|92110021 PQ loop repeat containing 2 isoform 1 [Homo sapiens] 29 2.9
gi|92110025 PQ loop repeat containing 2 isoform 1 [Homo sapiens] 29 2.9
gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens] 28 6.4
gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 28 6.4
gi|169209613 PREDICTED: hypothetical protein LOC100128785 [Homo ... 28 6.4
gi|169210642 PREDICTED: hypothetical protein LOC100128785 [Homo ... 28 6.4
gi|169210176 PREDICTED: hypothetical protein LOC100128785 [Homo ... 28 6.4
gi|24307909 ral guanine nucleotide dissociation stimulator isofo... 28 6.4
gi|108796058 ral guanine nucleotide dissociation stimulator isof... 28 6.4
gi|163965366 nascent polypeptide-associated complex alpha subuni... 28 6.4
gi|23097240 leucine-rich repeats and WD repeat domain containing... 28 6.4
gi|115430252 serine threonine kinase 39 (STE20/SPS1 homolog, yea... 27 8.4
>gi|222831620 interleukin 18 binding protein isoform a precursor
[Homo sapiens]
Length = 194
Score = 402 bits (1034), Expect = e-113
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
Sbjct: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
Query: 61 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS 120
AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
Sbjct: 61 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS 120
Query: 121 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ 180
RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
Sbjct: 121 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ 180
Query: 181 EALPSSHSSPQQQG 194
EALPSSHSSPQQQG
Sbjct: 181 EALPSSHSSPQQQG 194
>gi|89111129 interleukin 18 binding protein isoform a precursor
[Homo sapiens]
Length = 194
Score = 402 bits (1034), Expect = e-113
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
Sbjct: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
Query: 61 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS 120
AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
Sbjct: 61 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS 120
Query: 121 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ 180
RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
Sbjct: 121 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ 180
Query: 181 EALPSSHSSPQQQG 194
EALPSSHSSPQQQG
Sbjct: 181 EALPSSHSSPQQQG 194
>gi|89111125 interleukin 18 binding protein isoform a precursor
[Homo sapiens]
Length = 194
Score = 402 bits (1034), Expect = e-113
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
Sbjct: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
Query: 61 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS 120
AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
Sbjct: 61 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS 120
Query: 121 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ 180
RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
Sbjct: 121 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ 180
Query: 181 EALPSSHSSPQQQG 194
EALPSSHSSPQQQG
Sbjct: 181 EALPSSHSSPQQQG 194
>gi|89111127 interleukin 18 binding protein isoform a precursor
[Homo sapiens]
Length = 194
Score = 402 bits (1034), Expect = e-113
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
Sbjct: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
Query: 61 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS 120
AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
Sbjct: 61 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS 120
Query: 121 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ 180
RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
Sbjct: 121 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ 180
Query: 181 EALPSSHSSPQQQG 194
EALPSSHSSPQQQG
Sbjct: 181 EALPSSHSSPQQQG 194
>gi|222831607 interleukin 18 binding protein isoform b precursor
[Homo sapiens]
Length = 115
Score = 166 bits (421), Expect = 9e-42
Identities = 78/79 (98%), Positives = 79/79 (100%)
Query: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
Sbjct: 1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA 60
Query: 61 AKQCPALEVTWPEVEVPLN 79
AKQCPALEVTWPEVEVPL+
Sbjct: 61 AKQCPALEVTWPEVEVPLS 79
>gi|19913396 smoothelin isoform b [Homo sapiens]
Length = 915
Score = 36.6 bits (83), Expect = 0.014
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 24 VTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEV 69
VTLL+RA P S T+++ AS S+ P +PP+ PA QC EV
Sbjct: 187 VTLLLRAPPGS--TSSSPASPSSSPTPASPEPPLEPAEAQCLTAEV 230
>gi|19913394 smoothelin isoform c [Homo sapiens]
Length = 917
Score = 36.6 bits (83), Expect = 0.014
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 24 VTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEV 69
VTLL+RA P S T+++ AS S+ P +PP+ PA QC EV
Sbjct: 187 VTLLLRAPPGS--TSSSPASPSSSPTPASPEPPLEPAEAQCLTAEV 230
>gi|19913398 smoothelin isoform a [Homo sapiens]
Length = 940
Score = 36.6 bits (83), Expect = 0.014
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 24 VTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEV 69
VTLL+RA P S T+++ AS S+ P +PP+ PA QC EV
Sbjct: 187 VTLLLRAPPGS--TSSSPASPSSSPTPASPEPPLEPAEAQCLTAEV 230
>gi|11225607 interleukin 1 receptor accessory protein-like 2 [Homo
sapiens]
Length = 686
Score = 35.4 bits (80), Expect = 0.031
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 21/124 (16%)
Query: 33 VSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVPLNGTLSLSCVACSRF 92
V +TT ++ + K P P+FP Q ++V ++ PLN + C F
Sbjct: 223 VRRTTELKVTALLTDKPP----KPLFPMENQPSVIDV---QLGKPLN-------IPCKAF 268
Query: 93 PNFS-----ILYWLGNGSFIEHLPGRLWEGSTSRERGSTGTQLCK-ALVLEQLTPALHST 146
FS ++YW+ FIE L G + EG + G + + AL+ + + A
Sbjct: 269 FGFSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLGEKEVELALIFDSVVEA-DLA 327
Query: 147 NFSC 150
N++C
Sbjct: 328 NYTC 331
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 33.1 bits (74), Expect = 0.15
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 28 VRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVPLNGTLSLSCV 87
V T + TTT TA+ K P P+ PP P AK P + P P +L S
Sbjct: 749 VAVTTTTTTTTTTTATQEEEKKPPPALPPPPPLAKFPPPSQPQPPPPPPPSPASLLKSLA 808
Query: 88 ACSRFPNFSILYWLGNGSFIEHLPGRL 114
+ + + G G+ + PG L
Sbjct: 809 SVLEGQKYC---YRGTGAAVSTRPGPL 832
>gi|75709198 nephronectin [Homo sapiens]
Length = 565
Score = 32.3 bits (72), Expect = 0.26
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 2 TMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAA 61
T +NW PD+ W ++ ++ P S+ TT T + T P P PP P
Sbjct: 281 TGNNNWIPDVGSTWWPPKTPYIPPIITN-RPTSKPTTRPTP--KPTPIPTPPPPPPLPTE 337
Query: 62 KQCPALEVTWPE 73
+ P L T PE
Sbjct: 338 LRTP-LPPTTPE 348
>gi|148727255 microtubule associated serine/threonine kinase family
member 4 isoform a [Homo sapiens]
Length = 2434
Score = 31.2 bits (69), Expect = 0.58
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 39 AATASVRSTK--DPCPSQPPVFPAAKQCPALEVTWPEVEVPLNGTLSLS 85
+ TA+V TK DP P+QPP PA KQ +VT P + +SLS
Sbjct: 2363 SVTATVGETKGKDPAPAQPP--PARKQNVGRDVTKPSPAPNTDRPISLS 2409
>gi|44662821 LRRN4 C-terminal like [Homo sapiens]
Length = 238
Score = 30.8 bits (68), Expect = 0.76
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 5/97 (5%)
Query: 45 RSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNG 104
R + PC V PAA CP L + P G + ++ ++++W
Sbjct: 54 RHLQVPCKELQRVGPAACLCPGLSSPAQPPDPPRMGEVRIAAEE-----GRAVVHWCAPF 108
Query: 105 SFIEHLPGRLWEGSTSRERGSTGTQLCKALVLEQLTP 141
S + H LW+GS + ++G + L+ L P
Sbjct: 109 SPVLHYWLLLWDGSEAAQKGPPLNATVRRAELKGLKP 145
>gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo
sapiens]
Length = 601
Score = 29.6 bits (65), Expect = 1.7
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 24 VTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPA 66
V L+++ +Q AATAS ST DP S P PA+ PA
Sbjct: 78 VHLVIKTPQKAQDPAAATASSPSTPDPA-SAPSTTPASPATPA 119
>gi|169214031 PREDICTED: hypothetical LOC646508 [Homo sapiens]
Length = 560
Score = 28.9 bits (63), Expect = 2.9
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 29 RATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVP 77
+AT + T AT R P PS P + P A+ CP L+ P + VP
Sbjct: 442 KATAETAATKTATLQPRVNLQPAPSSPFLGP-AQGCPVLQ-PGPPIHVP 488
>gi|239751865 PREDICTED: hypothetical LOC646508 [Homo sapiens]
Length = 528
Score = 28.9 bits (63), Expect = 2.9
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 29 RATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVP 77
+AT + T AT R P PS P + P A+ CP L+ P + VP
Sbjct: 410 KATAETAATKTATLQPRVNLQPAPSSPFLGP-AQGCPVLQ-PGPPIHVP 456
>gi|169213419 PREDICTED: hypothetical LOC646508 [Homo sapiens]
Length = 560
Score = 28.9 bits (63), Expect = 2.9
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 29 RATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEVP 77
+AT + T AT R P PS P + P A+ CP L+ P + VP
Sbjct: 442 KATAETAATKTATLQPRVNLQPAPSSPFLGP-AQGCPVLQ-PGPPIHVP 488
>gi|153792110 HEG homolog 1 [Homo sapiens]
Length = 1381
Score = 28.9 bits (63), Expect = 2.9
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 32 PVSQTT-TAATASVRSTKDPCPSQPPVFPAAKQCP 65
PVS TT T+A SV T P S PV P A++ P
Sbjct: 720 PVSLTTSTSAPLSVSQTTLPQSSSTPVLPRARETP 754
>gi|92110021 PQ loop repeat containing 2 isoform 1 [Homo sapiens]
Length = 291
Score = 28.9 bits (63), Expect = 2.9
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 71 WPEVEVPLNGTLSLSCVACSRFPNFSILYWLGN 103
W E V L G +S+ C A S FP F Y GN
Sbjct: 34 WDEASVGL-GLISILCFAASTFPQFIKAYKTGN 65
>gi|92110025 PQ loop repeat containing 2 isoform 1 [Homo sapiens]
Length = 291
Score = 28.9 bits (63), Expect = 2.9
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 71 WPEVEVPLNGTLSLSCVACSRFPNFSILYWLGN 103
W E V L G +S+ C A S FP F Y GN
Sbjct: 34 WDEASVGL-GLISILCFAASTFPQFIKAYKTGN 65
>gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens]
Length = 694
Score = 27.7 bits (60), Expect = 6.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 23 VVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPV 57
++ ++A V Q T AA + + KD P +PP+
Sbjct: 386 IIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPL 420
>gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]
Length = 2382
Score = 27.7 bits (60), Expect = 6.4
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 16 VLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVE 75
V L VVT +TPVS TT+ +K P ++ PV P + PA T P +
Sbjct: 1721 VALPVTPVVTPGQVSTPVSTTTSGVKPGTAPSKPPL-TKAPVLPVGTELPA--GTLPSEQ 1777
Query: 76 VP 77
+P
Sbjct: 1778 LP 1779
>gi|169209613 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 27.7 bits (60), Expect = 6.4
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
Query: 31 TPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEV 76
TP + T A TK P P PV P + C TWPE ++
Sbjct: 265 TPPALVDTMAQMDTLLTKQPAPQTIPVVP--QSC----ATWPETQL 304
>gi|169210642 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 27.7 bits (60), Expect = 6.4
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
Query: 31 TPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEV 76
TP + T A TK P P PV P + C TWPE ++
Sbjct: 265 TPPALVDTMAQMDTLLTKQPAPQTIPVVP--QSC----ATWPETQL 304
>gi|169210176 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 27.7 bits (60), Expect = 6.4
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
Query: 31 TPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVTWPEVEV 76
TP + T A TK P P PV P + C TWPE ++
Sbjct: 265 TPPALVDTMAQMDTLLTKQPAPQTIPVVP--QSC----ATWPETQL 304
>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
1 [Homo sapiens]
Length = 914
Score = 27.7 bits (60), Expect = 6.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 48 KDPCPSQP-PVFPAAKQCPALEVTWPEVEVPLNG 80
+DP PSQ + PA P+L+ +WP V NG
Sbjct: 341 QDPAPSQTLELEPAPAPVPSLQPSWPSPVVAENG 374
>gi|108796058 ral guanine nucleotide dissociation stimulator isoform
2 [Homo sapiens]
Length = 859
Score = 27.7 bits (60), Expect = 6.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 48 KDPCPSQP-PVFPAAKQCPALEVTWPEVEVPLNG 80
+DP PSQ + PA P+L+ +WP V NG
Sbjct: 286 QDPAPSQTLELEPAPAPVPSLQPSWPSPVVAENG 319
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 27.7 bits (60), Expect = 6.4
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Query: 32 PVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVT 70
P +T T + ++ P P + P PA KQ PAL +T
Sbjct: 881 PPKETPTPSVVNL-----PFPKEGPATPAPKQAPALSMT 914
>gi|23097240 leucine-rich repeats and WD repeat domain containing 1
[Homo sapiens]
Length = 647
Score = 27.7 bits (60), Expect = 6.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 54 QPPVFPAAKQCPALEVTWPE 73
QPP+ PAA Q P + WP+
Sbjct: 588 QPPLLPAALQAPTQILKWPQ 607
>gi|115430252 serine threonine kinase 39 (STE20/SPS1 homolog,
yeast) [Homo sapiens]
Length = 545
Score = 27.3 bits (59), Expect = 8.4
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 24 VTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALE-VTWP 72
V L +A PV T AA A +T P P+ P PA PA + V WP
Sbjct: 11 VQLPQQAAPV--TAAAAAAPAAATAAPAPAAPAA-PAPAPAPAAQAVGWP 57
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.130 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,763,349
Number of Sequences: 37866
Number of extensions: 399819
Number of successful extensions: 1616
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1591
Number of HSP's gapped (non-prelim): 47
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.