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Search of human proteins with 222446620
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222446620 hypothetical protein LOC342346 [Homo sapiens]
(1141 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222446620 hypothetical protein LOC342346 [Homo sapiens] 2282 0.0
gi|14149793 glutamine rich 2 [Homo sapiens] 107 6e-23
gi|24307909 ral guanine nucleotide dissociation stimulator isofo... 62 2e-09
gi|108796058 ral guanine nucleotide dissociation stimulator isof... 62 2e-09
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 62 3e-09
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 62 3e-09
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 62 3e-09
gi|11386183 WAS protein family, member 2 [Homo sapiens] 60 1e-08
gi|7706501 WW domain binding protein 11 [Homo sapiens] 58 4e-08
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 57 1e-07
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 56 2e-07
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 56 2e-07
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 55 5e-07
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 54 8e-07
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 52 4e-06
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 52 4e-06
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 52 4e-06
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 50 9e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 50 9e-06
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 50 1e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 50 1e-05
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 50 1e-05
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 50 1e-05
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 50 1e-05
gi|50428940 mediator complex subunit 25 [Homo sapiens] 50 2e-05
gi|146134388 YLP motif containing 1 [Homo sapiens] 50 2e-05
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 49 3e-05
gi|150170670 piccolo isoform 2 [Homo sapiens] 49 3e-05
gi|150378539 piccolo isoform 1 [Homo sapiens] 49 3e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 49 3e-05
>gi|222446620 hypothetical protein LOC342346 [Homo sapiens]
Length = 1141
Score = 2282 bits (5913), Expect = 0.0
Identities = 1141/1141 (100%), Positives = 1141/1141 (100%)
Query: 1 MSFSLTFTELANIAIPQCGVLNFKALHLLLHGILEHIHMAELKKVLSGDEDFLQTSQVVI 60
MSFSLTFTELANIAIPQCGVLNFKALHLLLHGILEHIHMAELKKVLSGDEDFLQTSQVVI
Sbjct: 1 MSFSLTFTELANIAIPQCGVLNFKALHLLLHGILEHIHMAELKKVLSGDEDFLQTSQVVI 60
Query: 61 MPREGDAQPILNPMKRLSNVFDHVVSRLDKLENQLALLQDLPSTAQLLEASQGTARPVQD 120
MPREGDAQPILNPMKRLSNVFDHVVSRLDKLENQLALLQDLPSTAQLLEASQGTARPVQD
Sbjct: 61 MPREGDAQPILNPMKRLSNVFDHVVSRLDKLENQLALLQDLPSTAQLLEASQGTARPVQD 120
Query: 121 LWHLIKLRKMVEGHDEVMAKSMQTLQDLLTDLHALQVTITALRKEVDMLKNMLDKVHPER 180
LWHLIKLRKMVEGHDEVMAKSMQTLQDLLTDLHALQVTITALRKEVDMLKNMLDKVHPER
Sbjct: 121 LWHLIKLRKMVEGHDEVMAKSMQTLQDLLTDLHALQVTITALRKEVDMLKNMLDKVHPER 180
Query: 181 MDIFAEDFKIQNWKMVALQREVASLQNKFKTIPKTEDMVLWSGLHDAMFTSEIGSSPLDL 240
MDIFAEDFKIQNWKMVALQREVASLQNKFKTIPKTEDMVLWSGLHDAMFTSEIGSSPLDL
Sbjct: 181 MDIFAEDFKIQNWKMVALQREVASLQNKFKTIPKTEDMVLWSGLHDAMFTSEIGSSPLDL 240
Query: 241 WQSVEQLPEAALAQTTKYLEATRAIQVSEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSL 300
WQSVEQLPEAALAQTTKYLEATRAIQVSEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSL
Sbjct: 241 WQSVEQLPEAALAQTTKYLEATRAIQVSEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSL 300
Query: 301 SRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTP 360
SRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTP
Sbjct: 301 SRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTP 360
Query: 361 GSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQP 420
GSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQP
Sbjct: 361 GSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQP 420
Query: 421 SRAPPPATEFGSLWPRPLQPYQSRQGEALQLAAVQVKGEENDVPSLRGLRERARKDGAPK 480
SRAPPPATEFGSLWPRPLQPYQSRQGEALQLAAVQVKGEENDVPSLRGLRERARKDGAPK
Sbjct: 421 SRAPPPATEFGSLWPRPLQPYQSRQGEALQLAAVQVKGEENDVPSLRGLRERARKDGAPK 480
Query: 481 DRTRKDGVPKDRGGKDVDPKDRAHKDDVPKDRGGKDVDPKDRAHKDDVPKDRGGKDGDPK 540
DRTRKDGVPKDRGGKDVDPKDRAHKDDVPKDRGGKDVDPKDRAHKDDVPKDRGGKDGDPK
Sbjct: 481 DRTRKDGVPKDRGGKDVDPKDRAHKDDVPKDRGGKDVDPKDRAHKDDVPKDRGGKDGDPK 540
Query: 541 DRVGKDGAPKEAQPKAPQSALHRLKTTAAIAAAAAAAYAAATSSAAQAAKVAAKFVKDAP 600
DRVGKDGAPKEAQPKAPQSALHRLKTTAAIAAAAAAAYAAATSSAAQAAKVAAKFVKDAP
Sbjct: 541 DRVGKDGAPKEAQPKAPQSALHRLKTTAAIAAAAAAAYAAATSSAAQAAKVAAKFVKDAP 600
Query: 601 ATKMAAIATDTAAAGPLGVFADVLGAGPSRGATESQILGDDSEIYEILSPSYSAASIGPD 660
ATKMAAIATDTAAAGPLGVFADVLGAGPSRGATESQILGDDSEIYEILSPSYSAASIGPD
Sbjct: 601 ATKMAAIATDTAAAGPLGVFADVLGAGPSRGATESQILGDDSEIYEILSPSYSAASIGPD 660
Query: 661 PALSQAMVATKQAMSPEDKKRAVKYSMSHIAQIPVKHDSLKEEFAQLSCNLNQRLSYLAN 720
PALSQAMVATKQAMSPEDKKRAVKYSMSHIAQIPVKHDSLKEEFAQLSCNLNQRLSYLAN
Sbjct: 661 PALSQAMVATKQAMSPEDKKRAVKYSMSHIAQIPVKHDSLKEEFAQLSCNLNQRLSYLAN 720
Query: 721 MGGPSSLGTTVDILQKKIGSLQKSRLKEEELERIWGNQIEMMKDRYITLDKAVENLQIRM 780
MGGPSSLGTTVDILQKKIGSLQKSRLKEEELERIWGNQIEMMKDRYITLDKAVENLQIRM
Sbjct: 721 MGGPSSLGTTVDILQKKIGSLQKSRLKEEELERIWGNQIEMMKDRYITLDKAVENLQIRM 780
Query: 781 DEFKTLQAQIKRLEMNKVNKSTMEEELREKADRSALAGKASRVDLETVALELNEMIQGIL 840
DEFKTLQAQIKRLEMNKVNKSTMEEELREKADRSALAGKASRVDLETVALELNEMIQGIL
Sbjct: 781 DEFKTLQAQIKRLEMNKVNKSTMEEELREKADRSALAGKASRVDLETVALELNEMIQGIL 840
Query: 841 FKVTIHEDSWKKAMEELSKDVNTKLVHSDLDPLKKEMEEVWKIVRKLLIEGLRLDPDSAA 900
FKVTIHEDSWKKAMEELSKDVNTKLVHSDLDPLKKEMEEVWKIVRKLLIEGLRLDPDSAA
Sbjct: 841 FKVTIHEDSWKKAMEELSKDVNTKLVHSDLDPLKKEMEEVWKIVRKLLIEGLRLDPDSAA 900
Query: 901 GFRRKLFKRVKCISCDRPVEMMTGPQLITIRKAHLLSRLRPASANSCEYLQRQQMREQQW 960
GFRRKLFKRVKCISCDRPVEMMTGPQLITIRKAHLLSRLRPASANSCEYLQRQQMREQQW
Sbjct: 901 GFRRKLFKRVKCISCDRPVEMMTGPQLITIRKAHLLSRLRPASANSCEYLQRQQMREQQW 960
Query: 961 LQLQDLGIQEDCQQDWGDGPQNATSLKCKSCNLLTLYPYGDPHVIDYDSAEVDILGVDGI 1020
LQLQDLGIQEDCQQDWGDGPQNATSLKCKSCNLLTLYPYGDPHVIDYDSAEVDILGVDGI
Sbjct: 961 LQLQDLGIQEDCQQDWGDGPQNATSLKCKSCNLLTLYPYGDPHVIDYDSAEVDILGVDGI 1020
Query: 1021 LYKGRVNSQRGAQPLAVAKELAAVKAPSPPSQSLYDRVHSSALFGAICPPLCPRSSACSA 1080
LYKGRVNSQRGAQPLAVAKELAAVKAPSPPSQSLYDRVHSSALFGAICPPLCPRSSACSA
Sbjct: 1021 LYKGRVNSQRGAQPLAVAKELAAVKAPSPPSQSLYDRVHSSALFGAICPPLCPRSSACSA 1080
Query: 1081 ASGPHLTMPARPPSLPPLLLLPPLIPSLRDPQQAPGSTRLSRAPHIESRVGRKPPEEPAN 1140
ASGPHLTMPARPPSLPPLLLLPPLIPSLRDPQQAPGSTRLSRAPHIESRVGRKPPEEPAN
Sbjct: 1081 ASGPHLTMPARPPSLPPLLLLPPLIPSLRDPQQAPGSTRLSRAPHIESRVGRKPPEEPAN 1140
Query: 1141 P 1141
P
Sbjct: 1141 P 1141
>gi|14149793 glutamine rich 2 [Homo sapiens]
Length = 1663
Score = 107 bits (267), Expect = 6e-23
Identities = 69/209 (33%), Positives = 111/209 (53%), Gaps = 13/209 (6%)
Query: 725 SSLGTTVDILQKKIGSLQKSRLK---------EEELERIWGNQIEMMKD---RYITLDKA 772
S+L + LQ + SL SR EE L R+ +++ D IT
Sbjct: 1225 STLVRRYEQLQDMVNSLAVSRPSKKAKLQRQDEELLGRVQSAILQVQGDCEKLNITTSNL 1284
Query: 773 VENLQIRMDEFKTLQAQIKRLEMNKVNKSTMEEELREKADRSALAGKASRVDLETVALEL 832
+E+ + + + L +++LE K N+ +E E+ KAD+SALA K SRV + +L
Sbjct: 1285 IEDHRQKQKDIAMLYQGLEKLEKEKANREHLEMEIDVKADKSALATKVSRVQFDATTEQL 1344
Query: 833 NEMIQGILFKVTIHEDSWKKAMEELSKDVNTKLVHSDLDPLKKEMEEVWKIVRKLLIEGL 892
N M+Q ++ K++ E W+K ++ L +++ KL +LDP+K+ +E+ WK +R+ L E
Sbjct: 1345 NHMMQELVAKMSGQEQDWQKMLDRLLTEMDNKLDRLELDPVKQLLEDRWKSLRQQLRERP 1404
Query: 893 RL-DPDSAAGFRRKLFKRVKCISCDRPVE 920
L D AA RR+L C+SCDRP+E
Sbjct: 1405 PLYQADEAAAMRRQLLAHFHCLSCDRPLE 1433
Score = 30.8 bits (68), Expect = 7.7
Identities = 12/19 (63%), Positives = 18/19 (94%)
Query: 1011 EVDILGVDGILYKGRVNSQ 1029
EVDILG+DG +YKGR++++
Sbjct: 1592 EVDILGLDGHIYKGRMDTR 1610
>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
1 [Homo sapiens]
Length = 914
Score = 62.4 bits (150), Expect = 2e-09
Identities = 46/129 (35%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 265 IQVSEPVQ-NPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAP----G 319
++ SEP++ P+ L V P L P A++ +RA P PA PE AP G
Sbjct: 248 LEHSEPIEAEPEALSPV-----PALKPTPELELALTPARAPSPVPAPAPEPEPAPTPAPG 302
Query: 320 CTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQ 379
E AP PAP + P +GLE P PAL P P P AP L PAP
Sbjct: 303 SELEVAPAPAPELQQAPEPAVGLESAPAPALELEPAPEQDP----APSQTLELEPAPAPV 358
Query: 380 PPPLGDWPA 388
P WP+
Sbjct: 359 PSLQPSWPS 367
Score = 56.6 bits (135), Expect = 1e-07
Identities = 47/131 (35%), Positives = 52/131 (39%), Gaps = 8/131 (6%)
Query: 276 LLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPV 335
LL + H E E PE S + P ALTP AP AP P P P
Sbjct: 244 LLAQLEHSEPIEAEPEALSPVP---ALKPTPELELALTPARAPSPVPAPAPEPEPAPTPA 300
Query: 336 PGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPL 395
PG EL + P P L P P+V G AP P L PAP P P P P+
Sbjct: 301 PGSELEVAPAPAPELQQAPEPAV--GLESAPAPALELEPAPEQDPAPSQTLELEPAPAPV 358
Query: 396 PQGWPRVGSWP 406
P P SWP
Sbjct: 359 PSLQP---SWP 366
>gi|108796058 ral guanine nucleotide dissociation stimulator isoform
2 [Homo sapiens]
Length = 859
Score = 62.4 bits (150), Expect = 2e-09
Identities = 46/129 (35%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 265 IQVSEPVQ-NPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAP----G 319
++ SEP++ P+ L V P L P A++ +RA P PA PE AP G
Sbjct: 193 LEHSEPIEAEPEALSPV-----PALKPTPELELALTPARAPSPVPAPAPEPEPAPTPAPG 247
Query: 320 CTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQ 379
E AP PAP + P +GLE P PAL P P P AP L PAP
Sbjct: 248 SELEVAPAPAPELQQAPEPAVGLESAPAPALELEPAPEQDP----APSQTLELEPAPAPV 303
Query: 380 PPPLGDWPA 388
P WP+
Sbjct: 304 PSLQPSWPS 312
Score = 56.6 bits (135), Expect = 1e-07
Identities = 47/131 (35%), Positives = 52/131 (39%), Gaps = 8/131 (6%)
Query: 276 LLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPV 335
LL + H E E PE S + P ALTP AP AP P P P
Sbjct: 189 LLAQLEHSEPIEAEPEALSPVP---ALKPTPELELALTPARAPSPVPAPAPEPEPAPTPA 245
Query: 336 PGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPL 395
PG EL + P P L P P+V G AP P L PAP P P P P+
Sbjct: 246 PGSELEVAPAPAPELQQAPEPAV--GLESAPAPALELEPAPEQDPAPSQTLELEPAPAPV 303
Query: 396 PQGWPRVGSWP 406
P P SWP
Sbjct: 304 PSLQP---SWP 311
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 62.0 bits (149), Expect = 3e-09
Identities = 37/100 (37%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQP---PALTPESAPGCTTEFAPGPAPGTEPVPGLELGL 342
P L P S + + Q P+ P PA TP P AP PAP PV
Sbjct: 106 PPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVA 165
Query: 343 ELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPP 382
L P PA P P P+ P + PAP P P PAP P P
Sbjct: 166 VLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 205
Score = 54.7 bits (130), Expect = 5e-07
Identities = 33/96 (34%), Positives = 37/96 (38%), Gaps = 14/96 (14%)
Query: 285 VPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLEL 344
VP P + L+ A PA P P +AP AP PAP P P
Sbjct: 128 VPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPA------- 180
Query: 345 EPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P P P P P+ PAP P P PAP A P
Sbjct: 181 -PAPVAAPAPAPA------PAPAPAPAPAPAPDAAP 209
Score = 45.1 bits (105), Expect = 4e-04
Identities = 44/153 (28%), Positives = 52/153 (33%), Gaps = 35/153 (22%)
Query: 288 LLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPV 347
LL A AV++S EPA E AP P PAP + P PV
Sbjct: 92 LLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPS-VPVPAPASTP----------PPV 140
Query: 348 PALGPVPGPSVTPGSLPAPWPVL--------GPVPAPGAQPPPLGDWPALPRRWPLPQGW 399
P L P P P+ P + P PV P PAP P P+ P P P
Sbjct: 141 PVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPA 200
Query: 400 PRVGSWPLWDLGVLRPTQPQPSRAPPPATEFGS 432
P P P AP + E G+
Sbjct: 201 P----------------APAPDAAPQESAEQGA 217
Score = 35.8 bits (81), Expect = 0.24
Identities = 27/103 (26%), Positives = 33/103 (32%), Gaps = 8/103 (7%)
Query: 260 EATRAIQVSEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPG 319
E ++ V P P + + P P + A PA PA P AP
Sbjct: 123 EQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPA 182
Query: 320 CTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGS 362
AP PAP P P P PA P S G+
Sbjct: 183 PVAAPAPAPAPAPAPAPA--------PAPAPDAAPQESAEQGA 217
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 62.0 bits (149), Expect = 3e-09
Identities = 37/100 (37%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQP---PALTPESAPGCTTEFAPGPAPGTEPVPGLELGL 342
P L P S + + Q P+ P PA TP P AP PAP PV
Sbjct: 106 PPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVA 165
Query: 343 ELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPP 382
L P PA P P P+ P + PAP P P PAP P P
Sbjct: 166 VLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 205
Score = 54.7 bits (130), Expect = 5e-07
Identities = 33/96 (34%), Positives = 37/96 (38%), Gaps = 14/96 (14%)
Query: 285 VPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLEL 344
VP P + L+ A PA P P +AP AP PAP P P
Sbjct: 128 VPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPA------- 180
Query: 345 EPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P P P P P+ PAP P P PAP A P
Sbjct: 181 -PAPVAAPAPAPA------PAPAPAPAPAPAPDAAP 209
Score = 45.1 bits (105), Expect = 4e-04
Identities = 44/153 (28%), Positives = 52/153 (33%), Gaps = 35/153 (22%)
Query: 288 LLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPV 347
LL A AV++S EPA E AP P PAP + P PV
Sbjct: 92 LLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPS-VPVPAPASTP----------PPV 140
Query: 348 PALGPVPGPSVTPGSLPAPWPVL--------GPVPAPGAQPPPLGDWPALPRRWPLPQGW 399
P L P P P+ P + P PV P PAP P P+ P P P
Sbjct: 141 PVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPA 200
Query: 400 PRVGSWPLWDLGVLRPTQPQPSRAPPPATEFGS 432
P P P AP + E G+
Sbjct: 201 P----------------APAPDAAPQESAEQGA 217
Score = 35.8 bits (81), Expect = 0.24
Identities = 27/103 (26%), Positives = 33/103 (32%), Gaps = 8/103 (7%)
Query: 260 EATRAIQVSEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPG 319
E ++ V P P + + P P + A PA PA P AP
Sbjct: 123 EQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPA 182
Query: 320 CTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGS 362
AP PAP P P P PA P S G+
Sbjct: 183 PVAAPAPAPAPAPAPAPA--------PAPAPDAAPQESAEQGA 217
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 62.0 bits (149), Expect = 3e-09
Identities = 37/100 (37%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQP---PALTPESAPGCTTEFAPGPAPGTEPVPGLELGL 342
P L P S + + Q P+ P PA TP P AP PAP PV
Sbjct: 117 PPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVA 176
Query: 343 ELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPP 382
L P PA P P P+ P + PAP P P PAP P P
Sbjct: 177 VLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 216
Score = 54.7 bits (130), Expect = 5e-07
Identities = 33/96 (34%), Positives = 37/96 (38%), Gaps = 14/96 (14%)
Query: 285 VPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLEL 344
VP P + L+ A PA P P +AP AP PAP P P
Sbjct: 139 VPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPA------- 191
Query: 345 EPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P P P P P+ PAP P P PAP A P
Sbjct: 192 -PAPVAAPAPAPA------PAPAPAPAPAPAPDAAP 220
Score = 45.1 bits (105), Expect = 4e-04
Identities = 44/153 (28%), Positives = 52/153 (33%), Gaps = 35/153 (22%)
Query: 288 LLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPV 347
LL A AV++S EPA E AP P PAP + P PV
Sbjct: 103 LLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPS-VPVPAPASTP----------PPV 151
Query: 348 PALGPVPGPSVTPGSLPAPWPVL--------GPVPAPGAQPPPLGDWPALPRRWPLPQGW 399
P L P P P+ P + P PV P PAP P P+ P P P
Sbjct: 152 PVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPA 211
Query: 400 PRVGSWPLWDLGVLRPTQPQPSRAPPPATEFGS 432
P P P AP + E G+
Sbjct: 212 P----------------APAPDAAPQESAEQGA 228
Score = 35.8 bits (81), Expect = 0.24
Identities = 27/103 (26%), Positives = 33/103 (32%), Gaps = 8/103 (7%)
Query: 260 EATRAIQVSEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPG 319
E ++ V P P + + P P + A PA PA P AP
Sbjct: 134 EQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPA 193
Query: 320 CTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGS 362
AP PAP P P P PA P S G+
Sbjct: 194 PVAAPAPAPAPAPAPAPA--------PAPAPDAAPQESAEQGA 228
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 60.1 bits (144), Expect = 1e-08
Identities = 46/136 (33%), Positives = 52/136 (38%), Gaps = 15/136 (11%)
Query: 292 GSSAQAVSLSRAQEPAQPPALTP-ESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPAL 350
GS S P+ PP P S PG FAP PAP P P + + PV
Sbjct: 283 GSGLAGPKRSSVVSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFG 342
Query: 351 GPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDL 410
P P +P S P P P P PPP D+P LP P P P G+ P
Sbjct: 343 SPGTPPPPSPPSFPPHPDFAAPPPPP---PPPAADYPTLP---PPPLSQPTGGAPP---- 392
Query: 411 GVLRPTQPQPSRAPPP 426
P P P PPP
Sbjct: 393 ----PPPPPPPPGPPP 404
Score = 43.9 bits (102), Expect = 9e-04
Identities = 49/171 (28%), Positives = 62/171 (36%), Gaps = 31/171 (18%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCT---TEFAPGPAPGTEPVP-----G 337
P L+ + S V A PP S+P + P PA + PV G
Sbjct: 226 PTLVYQNGSIGCVENVDASSYPPPPQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSG 285
Query: 338 LELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQ 397
L V P P P + GS P P P P PAP PPP+ P P P
Sbjct: 286 LAGPKRSSVVSPSHPPPAPPL--GSPPGPKPGFAPPPAPPPPPPPMIGIPPPPP----PV 339
Query: 398 GWPRVGSWPLWDLGVLRPTQPQ----------PSRAPPPATEFGSLWPRPL 438
G+ G+ P P+ P P PPPA ++ +L P PL
Sbjct: 340 GFGSPGTPP-------PPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPL 383
Score = 36.2 bits (82), Expect = 0.18
Identities = 38/153 (24%), Positives = 55/153 (35%), Gaps = 16/153 (10%)
Query: 1000 GDPHVIDYDSAEVDIL-GVDGILYKGRVNSQRGAQPLAVAKELAAVKAPSPPSQSLY--D 1056
G P + Y + + + VD Y S + P + + P PP++ Y D
Sbjct: 223 GYPPTLVYQNGSIGCVENVDASSYPPPPQSDSASSP---SPSFSEDNLPPPPAEFSYPVD 279
Query: 1057 RVHSSALFG-----AICPPLCPRSSACSAASGPH---LTMPARPPSLPPLLLLPPLIP-- 1106
S L G + P P + + GP PA PP PP++ +PP P
Sbjct: 280 NQRGSGLAGPKRSSVVSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPV 339
Query: 1107 SLRDPQQAPGSTRLSRAPHIESRVGRKPPEEPA 1139
P P + S PH + PP PA
Sbjct: 340 GFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPA 372
Score = 35.0 bits (79), Expect = 0.41
Identities = 30/85 (35%), Positives = 32/85 (37%), Gaps = 11/85 (12%)
Query: 306 PAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPA 365
P PP +P S P AP P P P P + L P P P G P P
Sbjct: 344 PGTPPPPSPPSFPPHPDFAAPPPPP---PPPAADYPT-LPPPPLSQPTGGAPPPPPPPPP 399
Query: 366 PWPVLGPVPAPGAQ-----PPPLGD 385
P P P P GA PPPL D
Sbjct: 400 PGP--PPPPFTGADGQPAIPPPLSD 422
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 58.2 bits (139), Expect = 4e-08
Identities = 53/136 (38%), Positives = 57/136 (41%), Gaps = 22/136 (16%)
Query: 306 PAQPPALTPESAPGCTTEFAPGPAPGTEPV---PGLELGLELEPVPALGPVPGPSVTPGS 362
P PP P PG T PGP PG P PG+ GL P+P L P PGP PG
Sbjct: 412 PLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMP-GLR-GPLPRLLP-PGPP--PGR 466
Query: 363 LPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSR 422
P P P GP P PPP G P LP P P G P G++RP P
Sbjct: 467 PPGPPP--GPPPGLPPGPPPRGPPPRLPP--PAPPGIPPPRP------GMMRPPLVPPLG 516
Query: 423 APPPATEFGSLWPRPL 438
PP G P PL
Sbjct: 517 PAPP----GLFPPAPL 528
Score = 51.6 bits (122), Expect = 4e-06
Identities = 41/117 (35%), Positives = 42/117 (35%), Gaps = 18/117 (15%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFA----PGPAPGTEPVPGLELG 341
P L P G L P PP L P PG PGP PG P P
Sbjct: 419 PPLRPPGPPT---GLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGP----- 470
Query: 342 LELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQG 398
P P L P P P P LP P P P P PG PPL +P P P G
Sbjct: 471 -PPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRPGMMRPPL-----VPPLGPAPPG 521
Score = 42.4 bits (98), Expect = 0.003
Identities = 45/145 (31%), Positives = 54/145 (37%), Gaps = 12/145 (8%)
Query: 301 SRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTP 360
S A++ +Q + G +T + AP P + P LGP P P + P
Sbjct: 364 SEAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPPLRP 423
Query: 361 GSLPAPWPVLGPVPAPGAQP---PP-----LGDWPALPRRWPLPQGWPRVGSWPLWDLGV 412
P P L P P PGA P PP G P L P P P P L
Sbjct: 424 ---PGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPP 480
Query: 413 LRPTQPQPSRAPPPATEFGSLWPRP 437
P + P R PPPA G PRP
Sbjct: 481 GPPPRGPPPRLPPPAPP-GIPPPRP 504
Score = 42.4 bits (98), Expect = 0.003
Identities = 35/102 (34%), Positives = 39/102 (38%), Gaps = 15/102 (14%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEP----------V 335
P L P G L R P PP P PG PGP P P +
Sbjct: 440 PFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGI 499
Query: 336 PGLELGLELEP-VPALGPVPGPSVTPGSLPAPWPVLGPVPAP 376
P G+ P VP LGP P P + P PAP P G + AP
Sbjct: 500 PPPRPGMMRPPLVPPLGPAP-PGLFP---PAPLPNPGVLSAP 537
Score = 39.3 bits (90), Expect = 0.022
Identities = 46/180 (25%), Positives = 71/180 (39%), Gaps = 22/180 (12%)
Query: 352 PVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLG 411
P+P P ++ ++ +P PGAQPP + L + V PL G
Sbjct: 140 PLPDMPHAPSNI-----LIQDIPLPGAQPPSI-----LKKTSAYGPPTRAVSILPLLGHG 189
Query: 412 VLRPTQPQPSRAPPPATEFGSLWPRPLQPYQSRQGEALQLAAVQVKGEENDVPSLRGLRE 471
V R + PPP G P+ +Q Y + G AL L + + D+ L +
Sbjct: 190 VPRLPPGRKPPGPPP----GPPPPQVVQMYGRKVGFALDLPP---RRRDEDMLYSPELAQ 242
Query: 472 RARKDGAPKDRTRKDGVPKDRGGKDVDPKDRAHKDDVPKDRGGKDVDPKDRAHKDDVPKD 531
R D + DG P+D D D D + DD D+ + D + H+D+ +D
Sbjct: 243 RGHDDDV-SSTSEDDGYPED---MDQDKHDDS-TDDSDTDKSDGESDGDEFVHRDNGERD 297
Score = 33.1 bits (74), Expect = 1.5
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 1042 AAVKAPSPPSQSLYDRVHSSALFGAICPPLCPRSSACSAASGPHLTMPARPPSLPPLLLL 1101
A+ + +PP ++ + + G PPL P + GP +P PP P L
Sbjct: 386 ASSQQQAPPQSVPPSQIQAPPMPGP--PPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLR 443
Query: 1102 PPLIPSLRDP 1111
PP +P LR P
Sbjct: 444 PPGMPGLRGP 453
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 56.6 bits (135), Expect = 1e-07
Identities = 86/340 (25%), Positives = 119/340 (35%), Gaps = 49/340 (14%)
Query: 248 PEAALAQTTKYLEATRAIQVSEP----------VQNPQLLQTVWHYEVPELLPEGSSAQA 297
PE A+ K ++ ++VS VQ P+ T P P G+ A A
Sbjct: 66 PERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATP---PAPPRAPRGAPAAA 122
Query: 298 VSLSRAQEPAQPP------ALTPESAPGCTTEFAPGP-APG-TEPVPGLELGLELEPVPA 349
+ + PA PP A P AP A P +PG +P P + P
Sbjct: 123 AAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQ-----RAAPL 177
Query: 350 LGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWD 409
P P P+ P P P P PA A+ PPL P P P Q P
Sbjct: 178 AAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPA--PPQQQQP--------- 226
Query: 410 LGVLRPTQPQPSRAPPPATEFGSLWP---RPLQPYQSRQGEA-LQLAAVQVKGEENDVPS 465
P QPQP G+ P R + Y G A +L +V+G + +
Sbjct: 227 ----PPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAA 282
Query: 466 LRGLRERARKDGAPKDRTRKDGVPKDRGGKDVDPKDRAHKDDVPKDRGGKDVDPKDRAHK 525
RG ER R R + G R ++ V + +D D +D +
Sbjct: 283 ARGRLERTRLGALALPRGDRPGRAPPAASARPSRSKRGGEERVLEKEEEED-DDEDEDEE 341
Query: 526 DDVPKDRGGKDGDPKDRVGKDGAPKEAQPKAPQSALHRLK 565
DDV + G + DR + + PQSA R+K
Sbjct: 342 DDVSE---GSEVPESDRPAGAQHHQLNGERGPQSAKERVK 378
Score = 37.7 bits (86), Expect = 0.063
Identities = 35/122 (28%), Positives = 47/122 (38%), Gaps = 26/122 (21%)
Query: 1030 RGAQPLAVAKELAAVKAPSPPSQSLYDRVHSSALFGAICPPLCPRSSACSAASGPHLTMP 1089
RGA A A AP PP A A P PR++A +AA+ P P
Sbjct: 116 RGAPAAAAAAAPPPTPAPPPPP----------APVAAAAPARAPRAAA-AAATAPPSPGP 164
Query: 1090 ARP----------PSLPPLLLLPPLIPSLRDPQQAPGSTRLSRAPHIESRVGRKPPEEPA 1139
A+P + PP PP + P++AP +R P + PP+ PA
Sbjct: 165 AQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLP-----PPPQPPA 219
Query: 1140 NP 1141
P
Sbjct: 220 PP 221
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 56.2 bits (134), Expect = 2e-07
Identities = 58/189 (30%), Positives = 73/189 (38%), Gaps = 37/189 (19%)
Query: 283 YEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAP--------GCTTEFAPGPAPGTEP 334
+ + + LPE S A+ ++S + P QPP P S P + P P T P
Sbjct: 5 FSLADALPEHSPAKTSAVSNTK-PGQPPQGWPGSNPWNNPSAPSSVPSGLPPSATPSTVP 63
Query: 335 VPGLELGLELEPVPALGPVPGPSVT-PGSLPAPWPVLGPVPAP--------GAQPPPLGD 385
G+ VP GP PGP P S P+ P GP PAP G P P
Sbjct: 64 FGPAPTGM-YPSVPPTGPPPGPPAPFPPSGPSCPPPGGPYPAPTVPGPGPTGPYPTPNMP 122
Query: 386 WPALPRRWPLPQG---------WPRVGSWPLW--DLGVLRPT------QPQPSRAPPPAT 428
+P LPR + P W + S P W +G PT P P APPP
Sbjct: 123 FPELPRPYGAPTDPAAAGPLGPWGSMSSGP-WAPGMGGQYPTPNMPYPSPGPYPAPPPPQ 181
Query: 429 EFGSLWPRP 437
G+ P P
Sbjct: 182 APGAAPPVP 190
Score = 52.8 bits (125), Expect = 2e-06
Identities = 68/245 (27%), Positives = 86/245 (35%), Gaps = 54/245 (22%)
Query: 239 DLWQSVEQLPEAALAQT-----TKYLEATRAIQVSEPVQNPQLLQTVWH----YEVPELL 289
D + + LPE + A+T TK + + S P NP +V P +
Sbjct: 3 DEFSLADALPEHSPAKTSAVSNTKPGQPPQGWPGSNPWNNPSAPSSVPSGLPPSATPSTV 62
Query: 290 PEGSSAQAV--SLSRAQEPAQPPALTPESAPGCTTEFAPGPAP--------GTEPVPGLE 339
P G + + S+ P PPA P S P C P PAP G P P +
Sbjct: 63 PFGPAPTGMYPSVPPTGPPPGPPAPFPPSGPSCPPPGGPYPAPTVPGPGPTGPYPTPNMP 122
Query: 340 L-------GLELEPVPA--LGPVPGPSVTP------GSLPAP---WPVLGPVPAPGAQPP 381
G +P A LGP S P G P P +P GP PAP PP
Sbjct: 123 FPELPRPYGAPTDPAAAGPLGPWGSMSSGPWAPGMGGQYPTPNMPYPSPGPYPAP---PP 179
Query: 382 PLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPPPATEFGSLWPRPLQPY 441
P A P W G G+W P P AP + L+P P P+
Sbjct: 180 PQAPGAAPPVPW----GTVPPGAWG----------PPAPYPAPTGSYPTPGLYPTPSNPF 225
Query: 442 QSRQG 446
Q G
Sbjct: 226 QVPSG 230
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 55.8 bits (133), Expect = 2e-07
Identities = 45/125 (36%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
Query: 306 PAQPPALTPESAPGCTTEFAPGPAPGTEP--VPGLELGLELEP--VPALGPVPGPSVTPG 361
P PA P G + PGP PG P +PG G P VP GP+PGP P
Sbjct: 156 PISGPAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGPISGPI 215
Query: 362 SLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPS 421
S P P P+ GP+P P + P P G P P P P P P+ G + P P+
Sbjct: 216 SGPNPGPIPGPIPGPISGPNP-GPIPG-PISGPNPGLIPGPIPGPISGPGPIIGPIPSPA 273
Query: 422 RAPPP 426
+ P P
Sbjct: 274 QIPGP 278
Score = 55.8 bits (133), Expect = 2e-07
Identities = 50/145 (34%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 306 PAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPA--LGPVPG--PSVTPG 361
P P P S P PGP PG P+PG G P+P GP PG P PG
Sbjct: 206 PIPGPISGPISGPN------PGPIPG--PIPGPISGPNPGPIPGPISGPNPGLIPGPIPG 257
Query: 362 SLPAPWPVLGPVPAPGAQPPP---LGDWPAL-PRRWPLPQGWPRV------GSWPLWDLG 411
+ P P++GP+P+P P P G P L P R P P + GS P G
Sbjct: 258 PISGPGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMRSPGSLPGLAPILGPGSGP--GSG 315
Query: 412 VLRPTQPQPSRAPPPATEFGSLWPR 436
+ P P P PA LWP+
Sbjct: 316 SVPAPIPGPGSLPAPA----PLWPQ 336
Score = 53.9 bits (128), Expect = 8e-07
Identities = 43/129 (33%), Positives = 52/129 (40%), Gaps = 16/129 (12%)
Query: 306 PAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPA 365
PAQ P P S PG A P+P P+PG G P P GP+PGP P +P
Sbjct: 106 PAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISGPAPIPG 165
Query: 366 P------WPVLGPVPA--PGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQ 417
P P GP+P PG P P+ P P+P P S P+ +
Sbjct: 166 PISGPFSGPNPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGPISGPI--------SG 217
Query: 418 PQPSRAPPP 426
P P P P
Sbjct: 218 PNPGPIPGP 226
Score = 53.5 bits (127), Expect = 1e-06
Identities = 43/126 (34%), Positives = 53/126 (42%), Gaps = 8/126 (6%)
Query: 285 VPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLEL 344
+P +P A S P P P PG PGP G P+PG G
Sbjct: 113 LPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISGPAPIPGPISGPFS 172
Query: 345 EPVPALGPVPGPSVTPGSLPAP--WPVLGP--VPAPGAQPPPLGDWPALPRRWPLPQGWP 400
P P GP+PGP+ PG +P P P+ GP VP PG P P+ + P P+P P
Sbjct: 173 GPNP--GPIPGPN--PGPIPGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGPIP 228
Query: 401 RVGSWP 406
S P
Sbjct: 229 GPISGP 234
Score = 49.7 bits (117), Expect = 2e-05
Identities = 39/134 (29%), Positives = 52/134 (38%), Gaps = 15/134 (11%)
Query: 294 SAQAVSLSRAQEPAQPPA-LTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGP 352
+A V + A P + P+ + P + P + PG G+ L P P P
Sbjct: 43 AAPLVPAASASAPQRGPSGILPAAEPTICSLHQAWGGPGCRAQKGIPAALSPGPGPIPAP 102
Query: 353 VPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGV 412
+PGP+ PG LP P GP+P P P P+ P P P G P+ G
Sbjct: 103 IPGPAQIPGPLPGSIP--GPIPGPAQIPSPI----------PAPIPGPISG--PVQIPGP 148
Query: 413 LRPTQPQPSRAPPP 426
R P P P P
Sbjct: 149 FRGPIPGPISGPAP 162
Score = 48.5 bits (114), Expect = 4e-05
Identities = 39/120 (32%), Positives = 49/120 (40%), Gaps = 22/120 (18%)
Query: 309 PPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPAL--GPVPGPSVTPGSLPA- 365
P AL+P P P P PG +PG P+P GP+PGP+ P +PA
Sbjct: 89 PAALSPGPGP------IPAPIPGPAQIPG--------PLPGSIPGPIPGPAQIPSPIPAP 134
Query: 366 -PWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAP 424
P P+ GPV PG P+ + P P P P G P G + P P P
Sbjct: 135 IPGPISGPVQIPGPFRGPIPGPISGPAPIPGPISGPFSGPNP----GPIPGPNPGPIPGP 190
Score = 48.5 bits (114), Expect = 4e-05
Identities = 33/107 (30%), Positives = 41/107 (38%), Gaps = 30/107 (28%)
Query: 310 PALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSV----------- 358
P P G PGP PG PG +G P+P+ +PGP
Sbjct: 236 PGPIPGPISGPNPGLIPGPIPGPISGPGPIIG----PIPSPAQIPGPGRLQGPGPILSPG 291
Query: 359 ---TPGSLPAPWPVLGP------------VPAPGAQPPPLGDWPALP 390
+PGSLP P+LGP +P PG+ P P WP P
Sbjct: 292 RMRSPGSLPGLAPILGPGSGPGSGSVPAPIPGPGSLPAPAPLWPQSP 338
Score = 30.8 bits (68), Expect = 7.7
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 26/72 (36%)
Query: 298 VSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPS 357
+S R + P P L P PG GP G+ P P+PG
Sbjct: 288 LSPGRMRSPGSLPGLAPILGPG------SGPGSGSVP----------------APIPG-- 323
Query: 358 VTPGSLPAPWPV 369
PGSLPAP P+
Sbjct: 324 --PGSLPAPAPL 333
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 54.7 bits (130), Expect = 5e-07
Identities = 54/184 (29%), Positives = 65/184 (35%), Gaps = 19/184 (10%)
Query: 306 PAQPPA------LTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVT 359
PA PPA +PE P E APGP P EL E P PA P P+
Sbjct: 37 PAPPPAPPLLSEASPEPIPEPCPELAPGPCPEATSESATELYTEPTPEPATEPASEPAPE 96
Query: 360 PGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQ 419
P + PAP P P P P P P + P P + P P +L +
Sbjct: 97 PATEPAPEPATEPAPEPA--PEPATESAPEPTPEPALESVPE----PAPELTPEVAPELA 150
Query: 420 PSRAPPPATEFGSLWPRPLQPYQSRQGEALQLAAVQVKGEENDVPSLRGLRERARKDGAP 479
P P P TE + P + R A L V E RGL+ +P
Sbjct: 151 PEPTPEPVTELAPEFCPEAAP-EFRPSPAPCLLQCPVDTRE------RGLKTSPSPSPSP 203
Query: 480 KDRT 483
RT
Sbjct: 204 SPRT 207
Score = 50.1 bits (118), Expect = 1e-05
Identities = 63/187 (33%), Positives = 70/187 (37%), Gaps = 32/187 (17%)
Query: 270 PVQNPQLLQTVWHYEVPELLPE---GSSAQAVSLSR-----------AQEPAQPPALTP- 314
P P LL +PE PE G +A S S A EPA PA P
Sbjct: 39 PPPAPPLLSEASPEPIPEPCPELAPGPCPEATSESATELYTEPTPEPATEPASEPAPEPA 98
Query: 315 -ESAPGCTTEFAPGPAP--GTEPVPGLELGLELEPVPALG--PVPGPSVTPGSLPAPWPV 369
E AP TE AP PAP TE P E P PAL P P P +TP P P
Sbjct: 99 TEPAPEPATEPAPEPAPEPATESAP------EPTPEPALESVPEPAPELTPEVAPELAP- 151
Query: 370 LGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPPPATE 429
P P P + P A P P P P + P+ T P PS +P P T
Sbjct: 152 -EPTPEPVTELAPEFCPEAAPEFRPSPA--PCLLQCPVDTRERGLKTSPSPSPSPSPRTP 208
Query: 430 FGSLWPR 436
W R
Sbjct: 209 MS--WSR 213
Score = 47.8 bits (112), Expect = 6e-05
Identities = 41/139 (29%), Positives = 47/139 (33%), Gaps = 4/139 (2%)
Query: 248 PEAALAQTTKYLEATRAIQVSEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPA 307
PEA T+ +EP P P P A + A EP
Sbjct: 67 PEATSESATELYTEPTPEPATEPASEPAPEPATEPAPEPATEPAPEPAPEPATESAPEPT 126
Query: 308 QPPAL--TPESAPGCTTEFAPGPAPGTEPVPGLELGLEL--EPVPALGPVPGPSVTPGSL 363
PAL PE AP T E AP AP P P EL E E P P P P + +
Sbjct: 127 PEPALESVPEPAPELTPEVAPELAPEPTPEPVTELAPEFCPEAAPEFRPSPAPCLLQCPV 186
Query: 364 PAPWPVLGPVPAPGAQPPP 382
L P+P P P
Sbjct: 187 DTRERGLKTSPSPSPSPSP 205
Score = 38.9 bits (89), Expect = 0.028
Identities = 42/138 (30%), Positives = 52/138 (37%), Gaps = 25/138 (18%)
Query: 348 PALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWP- 406
P G P S P P PWP P PAP PP L + A P P+P+ P + P
Sbjct: 14 PQDGEQPAESPEP---PPPWPPPPPPPAPPPAPPLLSE--ASPE--PIPEPCPELAPGPC 66
Query: 407 ----------LWDLGVLRP-TQPQPSRAPPPATEFGSLWPRPLQPYQSRQGEALQLAAVQ 455
L+ P T+P AP PATE P P +P E A +
Sbjct: 67 PEATSESATELYTEPTPEPATEPASEPAPEPATE-----PAP-EPATEPAPEPAPEPATE 120
Query: 456 VKGEENDVPSLRGLRERA 473
E P+L + E A
Sbjct: 121 SAPEPTPEPALESVPEPA 138
Score = 33.9 bits (76), Expect = 0.91
Identities = 31/113 (27%), Positives = 36/113 (31%), Gaps = 12/113 (10%)
Query: 329 APGTEPVPGLELGLELEPVPALGPVPGPSVT------------PGSLPAPWPVLGPVPAP 376
A GT P E E P P P P P +P P P L P P P
Sbjct: 8 AQGTAPPQDGEQPAESPEPPPPWPPPPPPPAPPPAPPLLSEASPEPIPEPCPELAPGPCP 67
Query: 377 GAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPPPATE 429
A + P P + P + T+P P AP PATE
Sbjct: 68 EATSESATELYTEPTPEPATEPASEPAPEPATEPAPEPATEPAPEPAPEPATE 120
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 53.9 bits (128), Expect = 8e-07
Identities = 51/178 (28%), Positives = 63/178 (35%), Gaps = 24/178 (13%)
Query: 265 IQVSEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEF 324
+ V PV + L+ +V +P S A + A P P L +S P +
Sbjct: 225 LSVPAPVPHSGLVPV----QVATSVPAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSAS 280
Query: 325 APGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLP------------APWPVLGP 372
P P + P G PVP P P P P S P AP VL P
Sbjct: 281 VLVPVPASAPPSG--------PVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAP 332
Query: 373 VPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPPPATEF 430
VP P P P PA P +P P S P ++ P P AP PA F
Sbjct: 333 VPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIF 390
Score = 46.2 bits (108), Expect = 2e-04
Identities = 45/151 (29%), Positives = 56/151 (37%), Gaps = 13/151 (8%)
Query: 235 SSPLDLWQSV-EQLPEAALAQTTKYLEATRAIQVSEPVQNPQLLQTVWHYEVPELLPEGS 293
S+PL + SV +P +A L A +S PV P L P
Sbjct: 272 SNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPLSVPVSAPPLALIQ--------APVPP 323
Query: 294 SAQAVSLSRAQEP--AQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALG 351
SA + L+ P A PA TP +AP + P P P + P L P P
Sbjct: 324 SAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPA 383
Query: 352 PVPGPSVTPGSLPAPWPVLGPVPAPGAQPPP 382
P P P TP P P P P P + P P
Sbjct: 384 PTPAPIFTPA--PTPMPAATPAAIPTSAPIP 412
Score = 42.7 bits (99), Expect = 0.002
Identities = 31/76 (40%), Positives = 36/76 (47%), Gaps = 14/76 (18%)
Query: 318 PGCTTEFAPGPAPGTEPVPG-----------LELGLEL-EPVPALGPVPGPSVTPGSLPA 365
P TT F+P PAP P PG ++ L + PVP G VP T S+PA
Sbjct: 190 PLVTTNFSPLPAPICPPAPGSASVPHSVPDAFQVPLSVPAPVPHSGLVPVQVAT--SVPA 247
Query: 366 PWPVLGPVPAPGAQPP 381
P P L PVPA PP
Sbjct: 248 PSPPLAPVPALAPAPP 263
Score = 41.6 bits (96), Expect = 0.004
Identities = 52/168 (30%), Positives = 60/168 (35%), Gaps = 40/168 (23%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELE 345
P P A L+ Q P P A T AP T AP PA T P
Sbjct: 300 PAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPA-STPPA---------- 348
Query: 346 PVPALGPVPGPSVTPGSLP----------APWPVLGPVPA----PGAQPPPLGDWPALPR 391
PA VP P+ TP S P AP PV P PA P P P A+P
Sbjct: 349 -APAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPAATPAAIPT 407
Query: 392 RWPLPQGW------------PRVGSWPL-WDLG-VLRPTQPQPSRAPP 425
P+P + P + PL + G VL P+QP PP
Sbjct: 408 SAPIPASFSLSRVCFPAAQAPAMQKVPLSFQPGTVLTPSQPLVYIPPP 455
Score = 33.5 bits (75), Expect = 1.2
Identities = 40/125 (32%), Positives = 46/125 (36%), Gaps = 30/125 (24%)
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLP----APWPVLGPVPAPGAQP--- 380
P GT P+ + P P P PG + P S+P P V PVP G P
Sbjct: 184 PVEGTLPL--VTTNFSPLPAPICPPAPGSASVPHSVPDAFQVPLSVPAPVPHSGLVPVQV 241
Query: 381 --------PPLGDWPALPRRWPLPQGWPRV--GSWPL-WDLGVL-------RPTQPQPSR 422
PPL PAL P P P + S PL VL P+ P P
Sbjct: 242 ATSVPAPSPPLAPVPALA---PAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLS 298
Query: 423 APPPA 427
AP PA
Sbjct: 299 APAPA 303
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 [Homo
sapiens]
Length = 1125
Score = 51.6 bits (122), Expect = 4e-06
Identities = 82/339 (24%), Positives = 122/339 (35%), Gaps = 60/339 (17%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQPPALTPESAP----GCTTEFAPGPAPGTEPVPGLELG 341
P LP Q VSL Q A P + ++ G P P P P L+
Sbjct: 792 PTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRF 851
Query: 342 LELEPVPA------LGPVPGPS----VTPGSLPAPWPVLGPVPAPGAQP----------- 380
+ P P GP PGP P + P+P GP PG P
Sbjct: 852 PLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGG 911
Query: 381 PPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPPPATEFGSLWPRPLQP 440
P D P + P Q P+ P + QP PS+ PPP + QP
Sbjct: 912 PEDRDGRQQPPQQPQQQPQPQAPQQPQQQ----QQQQPPPSQQPPPTQQ---------QP 958
Query: 441 YQSRQGEALQLAAVQVK---GEENDVPSLRGLRERARKDGAPKDRTRKDGVPKDRGGKDV 497
Q R Q + + + G + + RER +D + +D + G+
Sbjct: 959 QQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRD---RREWGRRS 1015
Query: 498 DPKDRAHKDDVPKDRGG-----KDVDPKDRAHKDDVPKDRGGKDGDPKDRVGKDGAPKEA 552
+DR H+D ++R ++ D +DR + + + RG + + DR G + K
Sbjct: 1016 PDRDR-HRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPEVTDRAGGN---KTV 1071
Query: 553 QPKAPQ-------SALHRLKTTAAIAAAAAAAYAAATSS 584
+P Q S L + + AA+ + A ATSS
Sbjct: 1072 EPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSS 1110
Score = 45.4 bits (106), Expect = 3e-04
Identities = 67/248 (27%), Positives = 86/248 (34%), Gaps = 52/248 (20%)
Query: 241 WQSVEQLPEAALAQT----TKYLEATRAIQVSEPVQNPQL-LQTVWHYEVPELLPEGSSA 295
W+ + + PE +AQ T + E I PV P + + P++ P
Sbjct: 630 WKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGP 689
Query: 296 QAVSLSRAQEPAQPPALTPESA---PGCTTEFAPGPAPGTEPVPGLELGLELEPVPA--L 350
V QPPA TP PG F PG P P P L G +P L
Sbjct: 690 PVVGA------LQPPAFTPPLGIPPPG----FGPGVPPPPPPPPFLRPGFNPMHLPPGFL 739
Query: 351 GPVPGPSVTPG-SLPAPW--PVLGPVPAPGAQP-PPLGDW---------PALPRRWPLPQ 397
P P P +TP S+P P P+ P GA+ GD PA P P P
Sbjct: 740 PPGPPPPITPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPP 799
Query: 398 --------GWPRVGSWPLWDLGV-----------LRPTQPQPSRAPPPATEFGSLWPRPL 438
G V P+ L L P Q P PP F + PRP+
Sbjct: 800 VTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPM 859
Query: 439 QPYQSRQG 446
P+ +G
Sbjct: 860 PPHMMHRG 867
Score = 31.6 bits (70), Expect = 4.5
Identities = 27/115 (23%), Positives = 40/115 (34%), Gaps = 17/115 (14%)
Query: 285 VPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLE----- 339
V E E ++A + A P P A P +A P AP P G++
Sbjct: 274 VEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYT 333
Query: 340 ------------LGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPP 382
+G++ +P+ P+P PG P P P+ P P P
Sbjct: 334 QHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTP 388
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 [Homo
sapiens]
Length = 1132
Score = 51.6 bits (122), Expect = 4e-06
Identities = 82/339 (24%), Positives = 122/339 (35%), Gaps = 60/339 (17%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQPPALTPESAP----GCTTEFAPGPAPGTEPVPGLELG 341
P LP Q VSL Q A P + ++ G P P P P L+
Sbjct: 799 PTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRF 858
Query: 342 LELEPVPA------LGPVPGPS----VTPGSLPAPWPVLGPVPAPGAQP----------- 380
+ P P GP PGP P + P+P GP PG P
Sbjct: 859 PLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGG 918
Query: 381 PPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPPPATEFGSLWPRPLQP 440
P D P + P Q P+ P + QP PS+ PPP + QP
Sbjct: 919 PEDRDGRQQPPQQPQQQPQPQAPQQPQQQ----QQQQPPPSQQPPPTQQ---------QP 965
Query: 441 YQSRQGEALQLAAVQVK---GEENDVPSLRGLRERARKDGAPKDRTRKDGVPKDRGGKDV 497
Q R Q + + + G + + RER +D + +D + G+
Sbjct: 966 QQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRD---RREWGRRS 1022
Query: 498 DPKDRAHKDDVPKDRGG-----KDVDPKDRAHKDDVPKDRGGKDGDPKDRVGKDGAPKEA 552
+DR H+D ++R ++ D +DR + + + RG + + DR G + K
Sbjct: 1023 PDRDR-HRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPEVTDRAGGN---KTV 1078
Query: 553 QPKAPQ-------SALHRLKTTAAIAAAAAAAYAAATSS 584
+P Q S L + + AA+ + A ATSS
Sbjct: 1079 EPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSS 1117
Score = 37.7 bits (86), Expect = 0.063
Identities = 66/271 (24%), Positives = 85/271 (31%), Gaps = 76/271 (28%)
Query: 241 WQSVEQLPEAALAQT----TKYLEATRAIQVSEPVQNPQL-LQTVWHYEVPELLPEGSSA 295
W+ + + PE +AQ T + E I PV P + + P++ P
Sbjct: 615 WKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGP 674
Query: 296 QAVSLSRAQEPAQPPALTPESA---PGCTTEFAPGPAPGTEPVPGLELGLELEPVPA--L 350
V QPPA TP PG F PG P P P L G +P L
Sbjct: 675 PVVGA------LQPPAFTPPLGIPPPG----FGPGVPPPPPPPPFLRPGFNPMHLPPGFL 724
Query: 351 GPVPGPSVTPGSLPAPWPVLGPVPAPGA----------------QPPPL----------- 383
P P P +TP + P P P+ P + P P
Sbjct: 725 PPGPPPPITP-PVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAES 783
Query: 384 GDW---------PALPRRWPLPQ--------GWPRVGSWPLWDLGV-----------LRP 415
GD PA P P P G V P+ L L P
Sbjct: 784 GDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIP 843
Query: 416 TQPQPSRAPPPATEFGSLWPRPLQPYQSRQG 446
Q P PP F + PRP+ P+ +G
Sbjct: 844 LQRPPGMPPPHLQRFPLMPPRPMPPHMMHRG 874
Score = 31.6 bits (70), Expect = 4.5
Identities = 27/115 (23%), Positives = 40/115 (34%), Gaps = 17/115 (14%)
Query: 285 VPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLE----- 339
V E E ++A + A P P A P +A P AP P G++
Sbjct: 259 VEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYT 318
Query: 340 ------------LGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPP 382
+G++ +P+ P+P PG P P P+ P P P
Sbjct: 319 QHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTP 373
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [Homo
sapiens]
Length = 1147
Score = 51.6 bits (122), Expect = 4e-06
Identities = 82/339 (24%), Positives = 122/339 (35%), Gaps = 60/339 (17%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQPPALTPESAP----GCTTEFAPGPAPGTEPVPGLELG 341
P LP Q VSL Q A P + ++ G P P P P L+
Sbjct: 814 PTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRF 873
Query: 342 LELEPVPA------LGPVPGPS----VTPGSLPAPWPVLGPVPAPGAQP----------- 380
+ P P GP PGP P + P+P GP PG P
Sbjct: 874 PLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGG 933
Query: 381 PPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPPPATEFGSLWPRPLQP 440
P D P + P Q P+ P + QP PS+ PPP + QP
Sbjct: 934 PEDRDGRQQPPQQPQQQPQPQAPQQPQQQ----QQQQPPPSQQPPPTQQ---------QP 980
Query: 441 YQSRQGEALQLAAVQVK---GEENDVPSLRGLRERARKDGAPKDRTRKDGVPKDRGGKDV 497
Q R Q + + + G + + RER +D + +D + G+
Sbjct: 981 QQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRD---RREWGRRS 1037
Query: 498 DPKDRAHKDDVPKDRGG-----KDVDPKDRAHKDDVPKDRGGKDGDPKDRVGKDGAPKEA 552
+DR H+D ++R ++ D +DR + + + RG + + DR G + K
Sbjct: 1038 PDRDR-HRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPEVTDRAGGN---KTV 1093
Query: 553 QPKAPQ-------SALHRLKTTAAIAAAAAAAYAAATSS 584
+P Q S L + + AA+ + A ATSS
Sbjct: 1094 EPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSS 1132
Score = 37.7 bits (86), Expect = 0.063
Identities = 66/271 (24%), Positives = 85/271 (31%), Gaps = 76/271 (28%)
Query: 241 WQSVEQLPEAALAQT----TKYLEATRAIQVSEPVQNPQL-LQTVWHYEVPELLPEGSSA 295
W+ + + PE +AQ T + E I PV P + + P++ P
Sbjct: 630 WKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGP 689
Query: 296 QAVSLSRAQEPAQPPALTPESA---PGCTTEFAPGPAPGTEPVPGLELGLELEPVPA--L 350
V QPPA TP PG F PG P P P L G +P L
Sbjct: 690 PVVGA------LQPPAFTPPLGIPPPG----FGPGVPPPPPPPPFLRPGFNPMHLPPGFL 739
Query: 351 GPVPGPSVTPGSLPAPWPVLGPVPAPGA----------------QPPPL----------- 383
P P P +TP + P P P+ P + P P
Sbjct: 740 PPGPPPPITP-PVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGNAES 798
Query: 384 GDW---------PALPRRWPLPQ--------GWPRVGSWPLWDLGV-----------LRP 415
GD PA P P P G V P+ L L P
Sbjct: 799 GDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIP 858
Query: 416 TQPQPSRAPPPATEFGSLWPRPLQPYQSRQG 446
Q P PP F + PRP+ P+ +G
Sbjct: 859 LQRPPGMPPPHLQRFPLMPPRPMPPHMMHRG 889
Score = 31.6 bits (70), Expect = 4.5
Identities = 27/115 (23%), Positives = 40/115 (34%), Gaps = 17/115 (14%)
Query: 285 VPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLE----- 339
V E E ++A + A P P A P +A P AP P G++
Sbjct: 274 VEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYT 333
Query: 340 ------------LGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPP 382
+G++ +P+ P+P PG P P P+ P P P
Sbjct: 334 QHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTP 388
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 50.4 bits (119), Expect = 9e-06
Identities = 53/160 (33%), Positives = 63/160 (39%), Gaps = 20/160 (12%)
Query: 286 PELLPEGSSAQAVSLSRAQEPA--QPPALTPESAPGCTTEFAP---GPAPGTEPVPGLEL 340
P+ P+ +QA Q+P Q P L P APG +P P PG P L
Sbjct: 955 PQPHPQPHPSQAFGPQPPQQPLPLQHPHLFPPQAPGLLPPQSPYPYAPQPGVLGQPPPPL 1014
Query: 341 GLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWP 400
+L P PA P+P S G+LP P P GP P PPL PA R PQ P
Sbjct: 1015 HTQLYPGPAQDPLPAHS---GALPFPSP--GP---PQPPHPPLAYGPAPSTRPMGPQAAP 1066
Query: 401 RVGSWPLWDLGVLRPTQPQPSRAPPPATEFGSLWPRPLQP 440
P + P P P PA G P P+ P
Sbjct: 1067 LTIRGP----SSAGQSTPSPHLVPSPAPSPG---PGPVPP 1099
Score = 47.4 bits (111), Expect = 8e-05
Identities = 44/158 (27%), Positives = 57/158 (36%), Gaps = 20/158 (12%)
Query: 290 PEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPA 349
P ++ ++ A P TP P C P P P P P P A
Sbjct: 879 PATTTVDSIQAPIPSHTAPRPNPTPAPPPPCF----PVPPPQPLPTP------YTYPAGA 928
Query: 350 LGPVPGPSVTPGSLPA--PWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPL 407
P+P +PA P P +GP P P QP P + P + PLP P + +P
Sbjct: 929 KQPIPAQHHFSSGIPAGFPAPRIGPQPQPHPQPHPSQAFGPQPPQQPLPLQHPHL--FPP 986
Query: 408 WDLGVLRPTQPQPSR------APPPATEFGSLWPRPLQ 439
G+L P P P PP L+P P Q
Sbjct: 987 QAPGLLPPQSPYPYAPQPGVLGQPPPPLHTQLYPGPAQ 1024
Score = 42.7 bits (99), Expect = 0.002
Identities = 39/139 (28%), Positives = 51/139 (36%), Gaps = 14/139 (10%)
Query: 306 PAQPPALTPESAPGCTT--EFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSL 363
PA P A P + P + E A P T V ++ + P P P P
Sbjct: 853 PAPPVAGLPSAPPPQFSGPELAMAVRPATTTVDSIQAPIPSHTAPRPNPTPAPP------ 906
Query: 364 PAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRA 423
P +PV P P P P G +P + G P +P +G QPQP
Sbjct: 907 PPCFPVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIP--AGFPAPRIG----PQPQPHPQ 960
Query: 424 PPPATEFGSLWPRPLQPYQ 442
P P+ FG P+ P Q
Sbjct: 961 PHPSQAFGPQPPQQPLPLQ 979
Score = 42.4 bits (98), Expect = 0.003
Identities = 33/102 (32%), Positives = 40/102 (39%), Gaps = 28/102 (27%)
Query: 289 LPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVP 348
LP S A +P PP A GPAP T P +G + P+
Sbjct: 1027 LPAHSGALPFPSPGPPQPPHPP-------------LAYGPAPSTRP-----MGPQAAPLT 1068
Query: 349 ALGP------VPGPSVTPGSLPAPWPVLGPVPA--PGAQPPP 382
GP P P + P P+P P GPVP P A+PPP
Sbjct: 1069 IRGPSSAGQSTPSPHLVPSPAPSPGP--GPVPPRPPAAEPPP 1108
Score = 34.7 bits (78), Expect = 0.53
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 306 PAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGP 356
PA+PP L P S P T + P P + P+P E PVP P GP
Sbjct: 1523 PAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVPE-APSSGP 1572
Score = 33.1 bits (74), Expect = 1.5
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 25/89 (28%)
Query: 341 GLELEPVPAL-GPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGW 399
GLE PV +L GP P + P SLP P+ P + PPPL PLP+
Sbjct: 1512 GLE-SPVASLPGPAEPPGLPPASLPESTPI------PSSSPPPLSS--------PLPEA- 1555
Query: 400 PRVGSWPLWDLGVLRPTQPQPSRAPPPAT 428
P+ P P PS PP ++
Sbjct: 1556 PQPKEEP--------PVPEAPSSGPPSSS 1576
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 50.4 bits (119), Expect = 9e-06
Identities = 89/334 (26%), Positives = 110/334 (32%), Gaps = 44/334 (13%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTT---EFAPGPAPGTEPVPGLELGL 342
P P + S P P A P G T + AP P T P P G
Sbjct: 943 PAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSP---KGG 999
Query: 343 ELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPA---LPRRWPLPQGW 399
P P P P P+VTP S P P P P GA PP P+ P PLP+G
Sbjct: 1000 PATPSPKGAPTP-PAVTPPS-PKGSPAATPFP-KGASTPPAATPPSPKGSPAATPLPKGA 1056
Query: 400 PR--VGSWPLWDLGVLRPT---QPQPSRAPPPATEFGSLWPRPLQPYQSRQGEALQLAAV 454
P + P G P+ P P A PP+ + G P P +G + AA
Sbjct: 1057 PTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSP-------KGAPMPPAAT 1109
Query: 455 QVKGEENDVPSLRGLRERARKDGAPKDRTRKDGVPKDRGGKDVDPKDRAHKDDV---PKD 511
PS +G GAP T P +GG P A P
Sbjct: 1110 P--------PSPKGGLATPPHKGAP--TTPAATPPSPKGGLATPPPKGAPTTPAATPPSP 1159
Query: 512 RGGKDVDPKDRAHKDDVPKDRGGKDGDPKDRVGKDGAPKEAQPKAPQSALHRLKTTAAIA 571
+GG P A P PK + +PK A P P + K A
Sbjct: 1160 KGGLATPPPKGA-----PTTPAATPPSPKGGLATP-SPKGA-PTTPAATPPSPKGGLATP 1212
Query: 572 AAAAAAYAAATSSAAQAAKVAAKFVKDAPATKMA 605
+ A A + + +A K AP T A
Sbjct: 1213 SPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAA 1246
Score = 45.1 bits (105), Expect = 4e-04
Identities = 91/342 (26%), Positives = 113/342 (33%), Gaps = 54/342 (15%)
Query: 309 PPALTPESAPGCTT----EFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTP---- 360
PPA TP S G + AP PA T P P G P P P P+ TP
Sbjct: 1266 PPAATPPSLKGGLATPPHKGAPNPAVVTPPSPK---GGPATSPPKGAPTP-PAATPPSPK 1321
Query: 361 GSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRP----- 415
GS P P P P P PP P LP P +G P + P G P
Sbjct: 1322 GSPGTPPPKGAPTP-PAVTPPSPKGTPTLPATTPSSKGGP---TTPSSKEGPTPPAATPS 1377
Query: 416 -------TQPQPSRAPPPATEFGSLWPRPLQPYQSRQGEALQL----AAVQVKGEENDVP 464
T P P R P + G + P ++ A + AA KG+
Sbjct: 1378 HKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPA 1437
Query: 465 SLRGLRERARKDGAPKDRTRKDGVPKDRGGKDVDPKDRAHKDDVPKDRGGKDVDPKDRAH 524
++A APK P +G DP A PK+ PK A
Sbjct: 1438 VTPVSLKKAPATSAPKG---GPATPSSKG----DPTLPAVTPPSPKEPPA----PKQVAT 1486
Query: 525 KDDVPKDRG--GKDGDPKDRVGKDGAPKEA--------QPKAPQSALHRLKTTAAIAAAA 574
K G P +PKE P AP + L KT A +A
Sbjct: 1487 SSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKE 1546
Query: 575 AAAYAAATSSAAQAAKVAAKFVKDAPATKMAAIATDTAAAGP 616
A A T + + A K+APAT + A+ A P
Sbjct: 1547 ALIPPAMTVPSPKKTP-AIPTPKEAPATPSSKEASSPPAVTP 1587
Score = 40.4 bits (93), Expect = 0.010
Identities = 76/343 (22%), Positives = 100/343 (29%), Gaps = 49/343 (14%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELE 345
P P + S P P A P G T G P G
Sbjct: 1198 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPAT 1257
Query: 346 PVPALGPVPGPSVTP----GSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPR 401
P P P P P+ TP G L P P PA P P G P P+G P
Sbjct: 1258 PPPKGAPTP-PAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSP-----PKGAPT 1311
Query: 402 VGSWPLWDLGVLRPTQPQPSRAPPPATEFGSLWPRPLQPYQSRQGEALQLAAVQVKGEEN 461
+ T P P +P G+ P + P + L KG
Sbjct: 1312 PPA----------ATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKG--- 1358
Query: 462 DVPSLRGLRERARKDGAPKDRTRKDGVPKDRGGKDVDPKDRAHKDDVPKDRGGKDVDPKD 521
G + K+G T P +GG + P +P +G DP
Sbjct: 1359 ------GPTTPSSKEGP----TPPAATPSHKGGPAMTPPSPKRGPAIPSPKG----DPTS 1404
Query: 522 RAHKDDVPKDRGGKDGDPKDRVGKDGA--PKEAQPKAPQSALHRLKTTAAIAAAAAAAYA 579
A PK P V ++GA P + P LK A +A
Sbjct: 1405 PAVIPLSPKKA------PATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPAT 1458
Query: 580 AATSSAAQAAKVAAKFVKDAPATKMAAIATD----TAAAGPLG 618
++ V K+ PA K A ++ A P+G
Sbjct: 1459 PSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMG 1501
Score = 38.5 bits (88), Expect = 0.037
Identities = 80/312 (25%), Positives = 96/312 (30%), Gaps = 48/312 (15%)
Query: 290 PEGSSA-----QAVSLSRAQEPAQP---PALTPESAPGCTTEFAPGPAPGTEPVPGLELG 341
P+GS A + S A P P PA TP TT A P+P P G
Sbjct: 1019 PKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKG 1078
Query: 342 LELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAP--GAQPPPLGDWPALPR-------- 391
P G TP AP P P+P G PP P P
Sbjct: 1079 APTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKG 1138
Query: 392 --RWPLPQGWPRV-GSWPLWDLGVLRPTQPQPSRAP------PPATEFGSLWP----RPL 438
P P+G P + P G L P P AP PP+ + G P P
Sbjct: 1139 GLATPPPKGAPTTPAATPPSPKGGL--ATPPPKGAPTTPAATPPSPKGGLATPSPKGAPT 1196
Query: 439 QPYQSRQGEALQLAAVQVKGEEN----DVPSLRGLRERARKDGAPKDRTRKDGVPKDRGG 494
P + LA KG PS +G GAP T P +GG
Sbjct: 1197 TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP--TTPAATPPSPKGG 1254
Query: 495 KDVDPKDRAHKDDV---PKDRGGKDVDPKDRAHKDDV---PKDRGGKDGDPKDRVGKDGA 548
P A P +GG P A V P +GG P
Sbjct: 1255 PATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGA---PT 1311
Query: 549 PKEAQPKAPQSA 560
P A P +P+ +
Sbjct: 1312 PPAATPPSPKGS 1323
Score = 37.4 bits (85), Expect = 0.082
Identities = 85/355 (23%), Positives = 110/355 (30%), Gaps = 49/355 (13%)
Query: 291 EGSSAQAVSLSRAQEPAQPPALTPESAPGCT-TEFAPGPAPGTEPVPGLELGLELEPVPA 349
E + V+L +E PA P+ AP + T +P A T P P G+ P P
Sbjct: 884 ETPTPSVVNLPFPKEGPATPA--PKQAPALSMTSSSPKKARAT-PAPK---GIPASPSPK 937
Query: 350 LGPVP---------GPSVTPGSLPAPWPVL--------GP-VPAPGAQPPPLGDWPALPR 391
P P G TP AP P GP P+P P P P P+
Sbjct: 938 GAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPK 997
Query: 392 ---RWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPPPATEFGSLWPRPLQPYQSRQGEA 448
P P+G P + + P P+ S A P + S P P A
Sbjct: 998 GGPATPSPKGAPTPPA--------VTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAA 1049
Query: 449 LQLAAVQVKGEENDVPSLRGLRERARKDGAPKDRTRKDGVPKDRGGKDVDPKDRAHKDDV 508
L +PS +G GAP PK G PK
Sbjct: 1050 TPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKG-GPATPSPKGAPMPPAA 1108
Query: 509 --PKDRGGKDVDPKDRAHKDDV---PKDRGGKDGDPKDRVGKDGAP--KEAQPKAPQSAL 561
P +GG P A P +GG P GAP A P +P+ L
Sbjct: 1109 TPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPP-----PKGAPTTPAATPPSPKGGL 1163
Query: 562 HRLKTTAAIAAAAAAAYAAATSSAAQAAKVAAKFVKDAPATKMAAIATDTAAAGP 616
A AA + A + K A P + +AT + P
Sbjct: 1164 ATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP 1218
Score = 34.7 bits (78), Expect = 0.53
Identities = 41/160 (25%), Positives = 54/160 (33%), Gaps = 25/160 (15%)
Query: 291 EGSSAQAVSLSRAQEPAQP--PALTPESAPG--------CTTEFAPGPAPGTEPVPGLEL 340
+GS+ + P P + PE++ TT P+P P P
Sbjct: 812 KGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVT 871
Query: 341 GLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPL---GDWPALPRRWPLPQ 397
L + V L P P TP + P+P GP Q P L P R P P+
Sbjct: 872 PLSPKGV-TLPPKETP--TPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPK 928
Query: 398 GWPRVGSWPLWDLGVLRPTQPQPSRAPPPATEFGSLWPRP 437
G P S P P A PP+ + G P P
Sbjct: 929 GIPASPS---------PKGAPTPPAATPPSPKGGPATPSP 959
Score = 33.9 bits (76), Expect = 0.91
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 1029 QRGAQPLAVAKELA-AVKAPSPPSQSLYDRVHSSALFGAICPPLCPRSSACSAASGPHLT 1087
Q+ + A K+ + + K P P +S ++A F + P P S++ SAA P ++
Sbjct: 1742 QKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPK--PESASVSAAPSPPVS 1799
Query: 1088 MPARP---PSLPPLLLLPPLIPSL 1108
+P P P+LPP P P L
Sbjct: 1800 LPLAPSPVPTLPPKQQFLPSSPGL 1823
Score = 33.1 bits (74), Expect = 1.5
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 296 QAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPG 355
+A + ++E + PPA+TP + G AP P EL L P P P
Sbjct: 1569 EAPATPSSKEASSPPAVTPSTYKG-----APSPK---------EL---LIPPAVTSPSPK 1611
Query: 356 PSVTPGSLPAPWPVLGP-VPAPGAQP--PPL 383
+ TP ++ P P GP PAP P PP+
Sbjct: 1612 EAPTPPAVTPPSPEKGPATPAPKGTPTSPPV 1642
Score = 32.0 bits (71), Expect = 3.4
Identities = 18/69 (26%), Positives = 30/69 (43%)
Query: 1073 PRSSACSAASGPHLTMPARPPSLPPLLLLPPLIPSLRDPQQAPGSTRLSRAPHIESRVGR 1132
P+ + +S T+PA P P P + + P++AP + AP + + +
Sbjct: 1452 PKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPS 1511
Query: 1133 KPPEEPANP 1141
P E PA P
Sbjct: 1512 SPKEVPATP 1520
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 50.1 bits (118), Expect = 1e-05
Identities = 50/196 (25%), Positives = 71/196 (36%), Gaps = 14/196 (7%)
Query: 244 VEQLPEAALAQTTKYLEATRA--IQVSEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLS 301
+E P TT L A+ S +P L H + ++
Sbjct: 302 IEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAPASSPADSP 361
Query: 302 RAQEPAQPPALTPESAPGCTTEFAPGPA-PGTEPVPGLELGLE---LEPVPA--LGPVPG 355
R Q + PA+ SAP T ++ GPA P +P + +PVPA P PG
Sbjct: 362 RPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSPG 421
Query: 356 PSVTPGSL-PAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLR 414
+ +P P+P P P PAP P P+ + P P P P V
Sbjct: 422 ANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP----SVAY 477
Query: 415 PTQP-QPSRAPPPATE 429
P +P+ PP T+
Sbjct: 478 SGGPAEPASRPPWVTD 493
Score = 33.1 bits (74), Expect = 1.5
Identities = 36/116 (31%), Positives = 41/116 (35%), Gaps = 21/116 (18%)
Query: 282 HYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLEL- 340
+Y P + A S + A P+ P TP AP T P PAP P P +
Sbjct: 423 NYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYT----PSPAPNYNPAPSVAYS 478
Query: 341 GLELEPVPALGPV----------PGPSVTPGS---LPAPWPVLGPVPAPGAQPPPL 383
G EP V PG S T S LP P P G Q PPL
Sbjct: 479 GGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPA---GPQVPPL 531
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 50.1 bits (118), Expect = 1e-05
Identities = 60/223 (26%), Positives = 75/223 (33%), Gaps = 16/223 (7%)
Query: 248 PEAALAQTTKYLEATRAIQVSEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPA 307
P+A A L+A + S PVQ P + P P SA S + A
Sbjct: 650 PQAPNALAVHLLQAPFSPPPSPPVQAP--------FSPPASPPVSPSATPPSQA-PPSLA 700
Query: 308 QPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPW 367
PP P S P P P P L++ P P P PS TP P
Sbjct: 701 APPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATP---PPRV 757
Query: 368 PVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPPPA 427
P L P P P P P P PQ P + + PL L P+ P P
Sbjct: 758 PPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQAL----PSPPASFPGQAPF 813
Query: 428 TEFGSLWPRPLQPYQSRQGEALQLAAVQVKGEENDVPSLRGLR 470
+ SL PL + L +QV P+L+ R
Sbjct: 814 SPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR 856
Score = 39.7 bits (91), Expect = 0.017
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 18/95 (18%)
Query: 1047 PSPPSQSLYDRVHSSALFGAICPPLCPRSSACSAASGPHLTMPARPPSLPPLLLLPPLIP 1106
PSPP Q+ + S + P P S A + + P L +P PP+ PP+ P
Sbjct: 669 PSPPVQAPFSPPASPP----VSPSATPPSQAPPSLAAPPLQVPPSPPA------SPPMSP 718
Query: 1107 SLRDPQQAPGSTRLSRAPHIESRVGRKPPEEPANP 1141
S P QAP P + + + PP PA+P
Sbjct: 719 SATPPPQAP--------PPLAAPPLQVPPSPPASP 745
Score = 38.5 bits (88), Expect = 0.037
Identities = 42/151 (27%), Positives = 49/151 (32%), Gaps = 14/151 (9%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELE 345
P L P + A P Q P P S P AP V L+
Sbjct: 609 PPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP 668
Query: 346 PVPAL--------GPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQ 397
P P + P PS TP S P P+ P P P P P P PQ
Sbjct: 669 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVP---PSPPASPPMSPSATPPPQ 725
Query: 398 GWPRVGSWPLWDLGVLRPTQP--QPSRAPPP 426
P + + PL + P P PS PPP
Sbjct: 726 APPPLAAPPL-QVPPSPPASPPMSPSATPPP 755
Score = 36.6 bits (83), Expect = 0.14
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 1049 PPSQSLYDRVHSSALFGAICPPLCPRSSACSAASGPHLTMPAR----PPSLPPLLLLPPL 1104
PP Q+ + + L CP CP + S + P P+ PP PP L PPL
Sbjct: 544 PPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPL 603
Query: 1105 IPSLRDPQQAPGSTRLSRA-PHIESRVGRKPPEEPANP 1141
L P +P +T +A P + + PP PA+P
Sbjct: 604 -QGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASP 640
Score = 35.4 bits (80), Expect = 0.31
Identities = 55/205 (26%), Positives = 76/205 (37%), Gaps = 14/205 (6%)
Query: 235 SSPLDLW--QSVEQL----PEAALAQTTKYLEATRAIQVSEPVQNPQLLQTVWHYE-VPE 287
SSPL + Q++ L P+A L+ T++ +Q P T E +P
Sbjct: 481 SSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPS 540
Query: 288 LLPEGSSAQAVSLSRAQEPAQP-PALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEP 346
L P + L+ P PA P AP P P + P + L
Sbjct: 541 LAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALAS 600
Query: 347 VPALGPVPGPSVTPGSLPAPW-PVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSW 405
P G +P P ++P + P P P +P A P P P P P PQ P +
Sbjct: 601 PPLQG-LPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQA-PNALAV 658
Query: 406 PLWDLGVLRPTQPQPSRAP--PPAT 428
L P P P +AP PPA+
Sbjct: 659 HLLQAPFSPPPSP-PVQAPFSPPAS 682
Score = 34.3 bits (77), Expect = 0.69
Identities = 43/135 (31%), Positives = 49/135 (36%), Gaps = 25/135 (18%)
Query: 304 QEPAQPPALTPE---SAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGP-VPGPSVT 359
Q P +PP P+ S P T APGP P P L GP + G S +
Sbjct: 853 QAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLS---------GPDLAGHSSS 903
Query: 360 PGSLPAPWPVL--GPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQ 417
S P GP A PPP + A P W R + PL G P
Sbjct: 904 ATSTPEELRGYDSGPEGGAAASPPPDAELAACH-----PAAWSRGPAPPLAFRGA--PGA 956
Query: 418 PQPSRAPPPATEFGS 432
P P PPAT GS
Sbjct: 957 PLPW---PPATGPGS 968
Score = 33.5 bits (75), Expect = 1.2
Identities = 42/157 (26%), Positives = 56/157 (35%), Gaps = 31/157 (19%)
Query: 336 PGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPL 395
PGL L P P P P P VTP +L VLG A G + PL + +
Sbjct: 22 PGL-----LTPRPPGSPRPPPPVTPAAL----RVLGAAGAVGRK--PLAERAGGIGGATI 70
Query: 396 PQGWPRVGSWPLWDLGVLRPTQPQPS-----RAPP-----------PATEFGSLWPRPLQ 439
P+ PR G P P+ RAPP P G+ P PL
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPL- 129
Query: 440 PYQSRQGEALQLAAVQVKGEENDVPSLRGLRERARKD 476
++G + +G+ + P L AR+D
Sbjct: 130 ---GQKGLRISAEETVARGKATEAPKRSALSAGARRD 163
Score = 33.1 bits (74), Expect = 1.5
Identities = 39/144 (27%), Positives = 49/144 (34%), Gaps = 24/144 (16%)
Query: 308 QPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPW 367
+PP +TP +P P P G + PVP P + TP LPA
Sbjct: 281 RPPQVTPPRKDAAPALGPLSSSPLATPSPS---GTKARPVPP----PDNAATP--LPATL 331
Query: 368 PVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPPPA 427
P P+ P PP P + P P P P+Q PS PP
Sbjct: 332 PPSPPLATPLPLAPPSPSAPPSLQTLPSPPATP--------------PSQAPPSMTTPPM 377
Query: 428 TEFGSLWP-RPLQPYQSRQGEALQ 450
SL P+Q S +LQ
Sbjct: 378 QAPPSLQTIPPIQVPHSLTSPSLQ 401
Score = 32.7 bits (73), Expect = 2.0
Identities = 51/206 (24%), Positives = 68/206 (33%), Gaps = 44/206 (21%)
Query: 261 ATRAIQVSEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSR--AQEPAQPPALTPESAP 318
A ++Q + + +P L T + + P + A S SR + P PP P S P
Sbjct: 408 ALSSLQATTSLGSPTLQAT---HSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLP 464
Query: 319 GCT---TEFAPGPAPGTEPVPGLELGLELEPVPALGPVPG------------------PS 357
T +P +P + P L + P+ AL + S
Sbjct: 465 ASPPLQTSLSPAVSPLSSP-------LTIHPLQALSSLASHSPQAPLSSLIMPPLETQSS 517
Query: 358 VTPGSLPAPWPVLGPVPA---PGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLR 414
+ P SL P L P P PPPL A P P + P PL
Sbjct: 518 LAPPSLQTPPASLTTPPLENLPSLAPPPLQTASA-PLTTPHLETPPCPAPCPL------- 569
Query: 415 PTQPQPSRAPPPATEFGSLWPRPLQP 440
P P PPP T P P P
Sbjct: 570 QAPPSPLTTPPPETPSSIATPPPQAP 595
Score = 32.7 bits (73), Expect = 2.0
Identities = 32/116 (27%), Positives = 39/116 (33%), Gaps = 5/116 (4%)
Query: 1028 SQRGAQPLAVAKELAAVKAPSPPSQSLYDRVHSSALFGAICPPLCP----RSSACSAASG 1083
S P LAA PPS + SA PPL + AS
Sbjct: 717 SPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASL 776
Query: 1084 PHLTMPARPPSLPPLLLLPPLIPSLRDPQQAPGSTRLSRAPHIE-SRVGRKPPEEP 1138
P + PP PP L PPL P PG S + + S + PP+ P
Sbjct: 777 PMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP 832
Score = 31.6 bits (70), Expect = 4.5
Identities = 32/106 (30%), Positives = 38/106 (35%), Gaps = 10/106 (9%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAP-----GPAPGTEPVPGLEL 340
P P + A++ Q PPA P AP + P P P PV L
Sbjct: 780 PLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL 839
Query: 341 GLELEPVPALGPV---PGPSVTPG-SLPAPWPVLGPVPAPGAQPPP 382
L++ P P P P TPG P L APG PPP
Sbjct: 840 -LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPP 884
Score = 30.8 bits (68), Expect = 7.7
Identities = 34/124 (27%), Positives = 38/124 (30%), Gaps = 14/124 (11%)
Query: 1028 SQRGAQPLAVAKELAAVKAPSPPSQSLYDRVHSSALFGAICPP-------LCPRSSACSA 1080
S P LAA PPS + SA PP P S S
Sbjct: 686 SPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASP 745
Query: 1081 ASGPHLTMPARPPSLPPLLLLPPLIPSLRDPQQAPGSTRLSRAPHIESRVGRKP----PE 1136
P T P P +PPLL PPL P P S P + P P
Sbjct: 746 PMSPSATPP---PRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPS 802
Query: 1137 EPAN 1140
PA+
Sbjct: 803 PPAS 806
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 50.1 bits (118), Expect = 1e-05
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 6/113 (5%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L P + S + P+ P LTP S P T P
Sbjct: 100 SPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPT 159
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P + P+ L P L P P++TP S P P P P ++P
Sbjct: 160 LTPSSRPI------LTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRP 206
Score = 45.1 bits (105), Expect = 4e-04
Identities = 31/111 (27%), Positives = 38/111 (34%)
Query: 270 PVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPA 329
P P T+ P L P S + P+ PP LTP + P T P
Sbjct: 8 PTLTPSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLT 67
Query: 330 PGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P + P L P P L P++TP S P P P P P
Sbjct: 68 PSSTPTLTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTP 118
Score = 43.9 bits (102), Expect = 9e-04
Identities = 30/113 (26%), Positives = 38/113 (33%), Gaps = 6/113 (5%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P + P L P S + P+ P LTP S P T P
Sbjct: 140 STPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPT 199
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P + P+ L P L P P +TP S P P P+ + P
Sbjct: 200 LTPSSRPI------LTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSSTP 246
Score = 42.7 bits (99), Expect = 0.002
Identities = 31/123 (25%), Positives = 40/123 (32%), Gaps = 10/123 (8%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P + P L P + S + P+ P LTP S P T P
Sbjct: 156 STPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPT 215
Query: 328 PAPGTEPV----------PGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPG 377
P + P+ P L P L P P++TP + P P P P
Sbjct: 216 LTPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPS 275
Query: 378 AQP 380
P
Sbjct: 276 NTP 278
Score = 42.0 bits (97), Expect = 0.003
Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 13/93 (13%)
Query: 306 PAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPA 365
P+ P LTP S P T P P ++P+ L P L P P++TP + P
Sbjct: 4 PSNTPTLTPSSPPTLTPSSTPTLTPSSQPI------LTRSSTPTLTPSSPPTLTPSNTPT 57
Query: 366 PWPVLGPVPAPGAQP-------PPLGDWPALPR 391
P P P + P P L P L R
Sbjct: 58 LTPSNTPTLTPSSTPTLTPSSTPTLTPQPILTR 90
Score = 41.6 bits (96), Expect = 0.004
Identities = 32/113 (28%), Positives = 37/113 (32%), Gaps = 4/113 (3%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P + P L P S + P+ P LTP S P T P
Sbjct: 22 STPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLT----PS 77
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P P P L P+ P PS TP P+ P L P P P
Sbjct: 78 STPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTP 130
Score = 41.2 bits (95), Expect = 0.006
Identities = 29/113 (25%), Positives = 38/113 (33%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L + S P+ P LTP + P T P
Sbjct: 14 SPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPT 73
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P + P + L P L P P++TP + P P P P P
Sbjct: 74 LTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTP 126
Score = 41.2 bits (95), Expect = 0.006
Identities = 31/115 (26%), Positives = 39/115 (33%), Gaps = 2/115 (1%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L P S + P+ P LTP S P T P
Sbjct: 180 STPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPI 239
Query: 328 PAPGTEPV--PGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
+ P P L P L P P++TP + P P P P + P
Sbjct: 240 LTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTP 294
Score = 39.3 bits (90), Expect = 0.022
Identities = 31/101 (30%), Positives = 37/101 (36%), Gaps = 6/101 (5%)
Query: 288 LLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEP--VPGLELGLELE 345
L P + S P+ P LTP S P T P P + P P L
Sbjct: 2 LTPSNTPTLTPSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPS 61
Query: 346 PVPALGPVPGPSVTPGSLP--APWPVLGPVPAPGAQP--PP 382
P L P P++TP S P P P+L P P PP
Sbjct: 62 NTPTLTPSSTPTLTPSSTPTLTPQPILTRSSTPTLTPSSPP 102
Score = 38.9 bits (89), Expect = 0.028
Identities = 31/113 (27%), Positives = 38/113 (33%), Gaps = 2/113 (1%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L + S P+ P LTP S P T P
Sbjct: 188 STPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSSTPT 247
Query: 328 PAPGTEPV--PGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGA 378
P + P P L P L P P++TP S P P P P +
Sbjct: 248 LTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSS 300
Score = 37.4 bits (85), Expect = 0.082
Identities = 29/113 (25%), Positives = 39/113 (34%), Gaps = 4/113 (3%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S+P+ T+ P L P + +L+ + P P+ TP P T P
Sbjct: 30 SQPILTRSSTPTLTPSSPPTLTPSNTP----TLTPSNTPTLTPSSTPTLTPSSTPTLTPQ 85
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P P L P+ P PS TP P+ P L P P P
Sbjct: 86 PILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTP 138
Score = 32.3 bits (72), Expect = 2.6
Identities = 24/96 (25%), Positives = 33/96 (34%), Gaps = 14/96 (14%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P+ P T+ P L + S + P+ P LTP + P T P
Sbjct: 220 SRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPT 279
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSL 363
P + P L P P++TP SL
Sbjct: 280 LTPSS--------------TPTLTPSSTPTLTPSSL 301
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 50.1 bits (118), Expect = 1e-05
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 6/113 (5%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L P + S + P+ P LTP S P T P
Sbjct: 100 SPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPT 159
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P + P+ L P L P P++TP S P P P P ++P
Sbjct: 160 LTPSSRPI------LTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRP 206
Score = 45.1 bits (105), Expect = 4e-04
Identities = 31/111 (27%), Positives = 38/111 (34%)
Query: 270 PVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPA 329
P P T+ P L P S + P+ PP LTP + P T P
Sbjct: 8 PTLTPSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLT 67
Query: 330 PGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P + P L P P L P++TP S P P P P P
Sbjct: 68 PSSTPTLTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTP 118
Score = 43.9 bits (102), Expect = 9e-04
Identities = 30/113 (26%), Positives = 38/113 (33%), Gaps = 6/113 (5%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P + P L P S + P+ P LTP S P T P
Sbjct: 140 STPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPT 199
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P + P+ L P L P P +TP S P P P+ + P
Sbjct: 200 LTPSSRPI------LTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSSTP 246
Score = 42.7 bits (99), Expect = 0.002
Identities = 31/123 (25%), Positives = 40/123 (32%), Gaps = 10/123 (8%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P + P L P + S + P+ P LTP S P T P
Sbjct: 156 STPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPT 215
Query: 328 PAPGTEPV----------PGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPG 377
P + P+ P L P L P P++TP + P P P P
Sbjct: 216 LTPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPS 275
Query: 378 AQP 380
P
Sbjct: 276 NTP 278
Score = 42.0 bits (97), Expect = 0.003
Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 13/93 (13%)
Query: 306 PAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPA 365
P+ P LTP S P T P P ++P+ L P L P P++TP + P
Sbjct: 4 PSNTPTLTPSSPPTLTPSSTPTLTPSSQPI------LTRSSTPTLTPSSPPTLTPSNTPT 57
Query: 366 PWPVLGPVPAPGAQP-------PPLGDWPALPR 391
P P P + P P L P L R
Sbjct: 58 LTPSNTPTLTPSSTPTLTPSSTPTLTPQPILTR 90
Score = 41.6 bits (96), Expect = 0.004
Identities = 32/113 (28%), Positives = 37/113 (32%), Gaps = 4/113 (3%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P + P L P S + P+ P LTP S P T P
Sbjct: 22 STPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLT----PS 77
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P P P L P+ P PS TP P+ P L P P P
Sbjct: 78 STPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTP 130
Score = 41.2 bits (95), Expect = 0.006
Identities = 29/113 (25%), Positives = 38/113 (33%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L + S P+ P LTP + P T P
Sbjct: 14 SPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPT 73
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P + P + L P L P P++TP + P P P P P
Sbjct: 74 LTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTP 126
Score = 41.2 bits (95), Expect = 0.006
Identities = 31/115 (26%), Positives = 39/115 (33%), Gaps = 2/115 (1%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L P S + P+ P LTP S P T P
Sbjct: 180 STPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPI 239
Query: 328 PAPGTEPV--PGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
+ P P L P L P P++TP + P P P P + P
Sbjct: 240 LTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTP 294
Score = 39.3 bits (90), Expect = 0.022
Identities = 31/101 (30%), Positives = 37/101 (36%), Gaps = 6/101 (5%)
Query: 288 LLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEP--VPGLELGLELE 345
L P + S P+ P LTP S P T P P + P P L
Sbjct: 2 LTPSNTPTLTPSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPS 61
Query: 346 PVPALGPVPGPSVTPGSLP--APWPVLGPVPAPGAQP--PP 382
P L P P++TP S P P P+L P P PP
Sbjct: 62 NTPTLTPSSTPTLTPSSTPTLTPQPILTRSSTPTLTPSSPP 102
Score = 38.9 bits (89), Expect = 0.028
Identities = 31/113 (27%), Positives = 38/113 (33%), Gaps = 2/113 (1%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L + S P+ P LTP S P T P
Sbjct: 188 STPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSSTPT 247
Query: 328 PAPGTEPV--PGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGA 378
P + P P L P L P P++TP S P P P P +
Sbjct: 248 LTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSS 300
Score = 37.4 bits (85), Expect = 0.082
Identities = 29/113 (25%), Positives = 39/113 (34%), Gaps = 4/113 (3%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S+P+ T+ P L P + +L+ + P P+ TP P T P
Sbjct: 30 SQPILTRSSTPTLTPSSPPTLTPSNTP----TLTPSNTPTLTPSSTPTLTPSSTPTLTPQ 85
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P P L P+ P PS TP P+ P L P P P
Sbjct: 86 PILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTP 138
Score = 32.3 bits (72), Expect = 2.6
Identities = 24/96 (25%), Positives = 33/96 (34%), Gaps = 14/96 (14%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P+ P T+ P L + S + P+ P LTP + P T P
Sbjct: 220 SRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPT 279
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSL 363
P + P L P P++TP SL
Sbjct: 280 LTPSS--------------TPTLTPSSTPTLTPSSL 301
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 50.1 bits (118), Expect = 1e-05
Identities = 62/208 (29%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 293 SSAQAVSLSRAQEPAQPPA------------LTPESAPGCTTEFAPGPAPG----TEPVP 336
SS Q+V L + A PA + P+S P P APG + P P
Sbjct: 630 SSQQSVMLGSLADAAPSPAQCVCSPPVSEGPVLPQSLPSLGAYQQPTAAPGLPVGSVPAP 689
Query: 337 GLELGLELE-PVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPR-RWP 394
L+ P PA+ P + P S P P P P PG QPPPL LP+ P
Sbjct: 690 ACPPSLQQHFPDPAMSFAP--VLPPPSTPMPTGPGQPAP-PGQQPPPLAQPTPLPQVLAP 746
Query: 395 LPQGWPRVGSWPLWDLGVLRPTQPQPSRAPP---PATEFGSLWPRPLQPYQSRQGEALQL 451
P + P QP P PP PA++ G+ P L+P Q Q L
Sbjct: 747 QP----------------VVPLQPVPPHLPPYLAPASQVGA--PAQLKPLQMPQAPLQPL 788
Query: 452 AAVQVKGEENDVPSLRGLRERARKDGAP 479
A QV + +P + + A DG P
Sbjct: 789 A--QVPPQMPPIPVVPPITPLAGIDGLP 814
Score = 44.3 bits (103), Expect = 7e-04
Identities = 55/174 (31%), Positives = 66/174 (37%), Gaps = 42/174 (24%)
Query: 290 PEGSSAQAVSLSRAQEPAQP--PALTPESAPGCTTEFAPGP------------APGTEPV 335
P G +A ++ + AQ P QP PA P+ AP T+ P P P P
Sbjct: 891 PPGVAALSIHSAVAQLPGQPVYPAAFPQMAP---TDVPPSPHHTVQNMRATPPQPALPPQ 947
Query: 336 PGLELGLELEPVPALGPVP----------GPSVTPGSLPAPWPVLGPVPAPGAQPPPLGD 385
P L L P P L P P P + P + P PVL P PA +P PL
Sbjct: 948 PTLPPQPVLPPQPTLPPQPVLPPQPTRPPQPVLPPQPMLPPQPVLPPQPALPVRPEPL-- 1005
Query: 386 WPALPRRWPLPQGWPRVGSWPLW--------DLGVLRPTQPQPSRA--PPPATE 429
P LP + P P GS L D+ PT P P A PP E
Sbjct: 1006 QPHLPEQ-AAPAATP--GSQILLGHPAPYAVDVAAQVPTVPVPPAAVLSPPLPE 1056
Score = 38.5 bits (88), Expect = 0.037
Identities = 38/134 (28%), Positives = 52/134 (38%), Gaps = 21/134 (15%)
Query: 286 PELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELE 345
P LP+ + Q V + P PP L P S G + P P P ++ ++
Sbjct: 737 PTPLPQVLAPQPVVPLQPVPPHLPPYLAPASQVGAPAQLKPLQMPQAPLQPLAQVPPQMP 796
Query: 346 PVPALGPV---PGPSVTPGSLP-APWPVLGPVPAP------------GAQPPPLGDWPAL 389
P+P + P+ G P +LP P + PVP P A PP PAL
Sbjct: 797 PIPVVPPITPLAGIDGLPPALPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPAS--PAL 854
Query: 390 PR---RWPLPQGWP 400
P + P P G P
Sbjct: 855 PLQAVKLPHPPGAP 868
Score = 32.0 bits (71), Expect = 3.4
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 290 PEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPA 349
PE +S + S R EP PPA PE +P T P PA G +P P L + + A
Sbjct: 1460 PEAASTRDASAPR--EPLPPPA--PEPSPHSGT---PQPALG-QPAPLLPAAVGAVSL-A 1510
Query: 350 LGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPP 382
+P P + P P P L + G PPP
Sbjct: 1511 TSQLPSPPLGPTVPPQPPSAL---ESDGEGPPP 1540
Score = 31.2 bits (69), Expect = 5.9
Identities = 38/140 (27%), Positives = 46/140 (32%), Gaps = 25/140 (17%)
Query: 306 PAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPA 365
P PPA S+P T G AP T +P EP G TP L +
Sbjct: 1377 PGAPPAPLAPSSPPVTALPQDGAAPATSTMP--------EPASGTASQAGGPGTPQGLTS 1428
Query: 366 PWPVLGPV----PAP-GAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQP 420
P+ AP QP +G P P P S P +P P
Sbjct: 1429 ELETSQPLAETHEAPLAVQPLVVGLAPCTPA--------PEAAS----TRDASAPREPLP 1476
Query: 421 SRAPPPATEFGSLWPRPLQP 440
AP P+ G+ P QP
Sbjct: 1477 PPAPEPSPHSGTPQPALGQP 1496
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 49.7 bits (117), Expect = 2e-05
Identities = 47/140 (33%), Positives = 57/140 (40%), Gaps = 25/140 (17%)
Query: 278 QTVWHYEVPELLPEGS--SAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPV 335
Q + P+ P+G+ ++ A + Q AQPP P+ PG + P P P P
Sbjct: 580 QNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASG-PPPPGPILRPQ 638
Query: 336 -PGLE---LGLELEPVPALGPVPGPSVT---------PGSLPAP-----WPVLGPVPAPG 377
PG L L P P VP P + P LP P P LGP P
Sbjct: 639 NPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGP---PL 695
Query: 378 AQPPPLGDWPA-LPRRWPLP 396
PPP WPA LP R PLP
Sbjct: 696 LHPPPAQSWPAQLPPRAPLP 715
Score = 37.4 bits (85), Expect = 0.082
Identities = 47/154 (30%), Positives = 61/154 (39%), Gaps = 31/154 (20%)
Query: 234 GSSPLDLWQSVEQLPEAALAQTTKYLEATRAIQVSEPVQNPQLLQTVWHYEVPELLPEGS 293
GS+P L QS + +P A + L A A Q P PQ Y+VP L
Sbjct: 233 GSAPGPL-QSKQPVPLPPAAPSGATLSA--APQQPLPPVPPQ-------YQVPGNLSAAQ 282
Query: 294 SA--QAVSLSRAQEPAQPPALTP-----ESAPGCTTEFAPGPAPGTEPVPGLELGLELEP 346
A AV ++ Q+ P +P ++APG F+ PAP +L P
Sbjct: 283 VAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAP------------QLPP 330
Query: 347 VPALGPVPGPSVTPG--SLPAPWPVLGPVPAPGA 378
P P P P+ P S AP L P PGA
Sbjct: 331 GPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGA 364
Score = 36.6 bits (83), Expect = 0.14
Identities = 35/111 (31%), Positives = 44/111 (39%), Gaps = 14/111 (12%)
Query: 286 PELLPE--GSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLE 343
P L P+ G++ Q SL P Q P+++ P AP P P LG
Sbjct: 633 PILRPQNPGANPQLRSLLLNPPPPQTGVPPPQAS---LHHLQPPGAPALLPPPHQGLGQP 689
Query: 344 LEPVPALGPVPG---PSVTPGSLPAPWPVL------GPVPAPGAQPPPLGD 385
P L P P P+ P P P +L GPVP PG QP + D
Sbjct: 690 QLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPSVMED 740
Score = 32.0 bits (71), Expect = 3.4
Identities = 30/111 (27%), Positives = 39/111 (35%), Gaps = 8/111 (7%)
Query: 274 PQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTE 333
P LQ+ +P P G++ LS A + PP PG + E
Sbjct: 236 PGPLQSKQPVPLPPAAPSGAT-----LSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVE 290
Query: 334 PVPGLELGL--ELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPP 382
+ GL P+ L P V P AP P L P P +PPP
Sbjct: 291 AAKNQKAGLGPRFSPITPLQQA-APGVGPPFSQAPAPQLPPGPPGAPKPPP 340
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 49.7 bits (117), Expect = 2e-05
Identities = 76/310 (24%), Positives = 114/310 (36%), Gaps = 60/310 (19%)
Query: 306 PAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPG---------- 355
P PP + P S P P P T P PG+ + +P P PG
Sbjct: 531 PTMPPPVLPPSLP---PPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGP 587
Query: 356 -PSVTPGSLPA--PWPVLGPVPAPGAQPPPLGDWPALPRRWP--------LPQGW-PRVG 403
P + P SL + P PVL P PPP+ P L P +PQG P++
Sbjct: 588 PPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIPPQLT 647
Query: 404 SWPLWDLGVLR----PTQPQPSRAPPPATEFGSLWPRPLQPYQSRQGEALQLAAVQVKGE 459
+ P+ + P +P+P+ P P + FGS P P G + Q+ + +
Sbjct: 648 AAPVPPASSSQSSQVPEKPRPALLPTPVS-FGSAPPTTYHPPLQSAGPSEQVNSKAPLSK 706
Query: 460 E----NDVPSLRGLRERARKDGAPKDRTRKDGVPKDRGGKDVDP-------KDRAHKDDV 508
+ S +GL E + P T +P GG DP R + D
Sbjct: 707 SALPYSSFSSDQGLGESSAAPSQP--ITAVKDMPVRSGGLLPDPPRSSYLESPRGPRFDG 764
Query: 509 PK---DRGGKDVDPKDRAHKDDVPKDRGGKDGDPKDRVGKDGAPKEAQ-------PKAPQ 558
P+ D G + P+ + P+ G + P+ R +G P E P+ P
Sbjct: 765 PRRFEDLGSRCEGPRPKG-----PRFEGNRPDGPRPRY--EGHPAEGTKSKWGMIPRGPA 817
Query: 559 SALHRLKTTA 568
S + +T+
Sbjct: 818 SQFYITPSTS 827
Score = 44.3 bits (103), Expect = 7e-04
Identities = 43/153 (28%), Positives = 57/153 (37%), Gaps = 37/153 (24%)
Query: 295 AQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVP 354
AQ L + + L P P P P P +PG G P P + P P
Sbjct: 59 AQLQQLQQMHQKQMQCVLQPHHLP-------PPPLPPPPVMPGGGYGDWQPPPPPMPPPP 111
Query: 355 GPSVT-------------------PGSLPAPW---PVLGPVPAPGAQPPPLGDWPALPRR 392
GP+++ PG +P P PVP PG+ PP + +P
Sbjct: 112 GPALSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVP-PGSYMPPSQSY--MPPP 168
Query: 393 WPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPP 425
P P +P S P L P QP PS++PP
Sbjct: 169 QPPPSYYPPTSSQP-----YLPPAQPSPSQSPP 196
Score = 38.1 bits (87), Expect = 0.048
Identities = 33/101 (32%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Query: 353 VPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGV 412
+P P V +P P P + P P + PPP+ PALP P P G P P V
Sbjct: 516 MPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMP-PALPATVP-PPGMPPPVMPPSLPTSV 573
Query: 413 LRPTQPQ--PSRAPPPA---TEFGSLWPRPLQPYQSRQGEA 448
P P S PPP S P P+ P S A
Sbjct: 574 PPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTA 614
Score = 37.7 bits (86), Expect = 0.063
Identities = 60/256 (23%), Positives = 89/256 (34%), Gaps = 51/256 (19%)
Query: 330 PGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPA---------PWPVLGPVPAPGAQP 380
PG P PG P P +G PG V P + PA P P+ P P P P
Sbjct: 1503 PGMYPPPG-----SYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPP 1557
Query: 381 PPLGDWPAL-PRRWPLPQ-GWPRVGSWPLWDLGVLRPTQ----------PQPSRAPPPAT 428
PP P + P+ + Q W + LWD + P PPP
Sbjct: 1558 PP----PVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSETAAIPSAPVLPPPPV 1613
Query: 429 EFGSLWPRPLQPYQSRQGEALQLAAVQVKGEENDVPSLR------GLRERARKDGAPKDR 482
P P+ + + G D+ + + G R R D P+
Sbjct: 1614 HSSIPPPGPVPMGMPPMSKPPPVQQTVDYGHGRDISTNKVEQIPYGERITLRPDPLPERS 1673
Query: 483 T-------RKDGVPKDRGGKDVDPKDRAHKDDVPKDRGGKDVDPKDRAHKDDVPKDRGGK 535
T ++D ++R D +P + + R K +DR D +DRG
Sbjct: 1674 TFETEHAGQRDRYDRER---DREPYFDRQSNVIADHRDFK----RDRETHRDRDRDRGVI 1726
Query: 536 DGDPKDRVGKDGAPKE 551
D D +DR ++ P++
Sbjct: 1727 DYD-RDRFDRERRPRD 1741
Score = 34.3 bits (77), Expect = 0.69
Identities = 29/83 (34%), Positives = 36/83 (43%), Gaps = 17/83 (20%)
Query: 1069 PPLCPRSSACSAASGPHLTMPARPPSL-----PPLLLLPPL--------IPSLRDPQQAP 1115
PP+ P S SA GP +P PPSL PP++ LPPL IP PQ P
Sbjct: 588 PPVLPPPSLSSA--GPPPVLP--PPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIP 643
Query: 1116 GSTRLSRAPHIESRVGRKPPEEP 1138
+ P S + PE+P
Sbjct: 644 PQLTAAPVPPASSSQSSQVPEKP 666
Score = 30.8 bits (68), Expect = 7.7
Identities = 53/198 (26%), Positives = 70/198 (35%), Gaps = 31/198 (15%)
Query: 339 ELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP---PPLGDWPALPRRWPL 395
E GL E +P V P P PV +P PG P PP+ P + +
Sbjct: 1588 EQGLNSEFKSETAAIPSAPVLP-----PPPVHSSIPPPGPVPMGMPPMSKPPPVQQTVDY 1642
Query: 396 PQGWP----RVGSWPLWDLGVLRPTQPQPSRAPPPATEFGSL----WPRPLQPYQSRQGE 447
G +V P + LRP P P R+ G R +PY RQ
Sbjct: 1643 GHGRDISTNKVEQIPYGERITLRP-DPLPERSTFETEHAGQRDRYDRERDREPYFDRQSN 1701
Query: 448 ALQLAAVQVKGEEN--DVPSLRGL----RERARKDGAPKD------RTRKDGVPKDRGGK 495
+ + E D RG+ R+R ++ P+D R +KD RGG
Sbjct: 1702 VIADHRDFKRDRETHRDRDRDRGVIDYDRDRFDRERRPRDDRAQSYRDKKDHSSSRRGGF 1761
Query: 496 DVDPKDRAHKDDVPKDRG 513
D DR K D P G
Sbjct: 1762 DRPSYDR--KSDRPVYEG 1777
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 48.9 bits (115), Expect = 3e-05
Identities = 33/115 (28%), Positives = 41/115 (35%), Gaps = 2/115 (1%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L P + S + P+ P LTP S P T P
Sbjct: 114 STPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPT 173
Query: 328 PAPGTEP--VPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P + P P L P L P P++TP S P P P P + P
Sbjct: 174 LTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTP 228
Score = 48.5 bits (114), Expect = 4e-05
Identities = 33/115 (28%), Positives = 42/115 (36%), Gaps = 2/115 (1%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L P + S + P+ P LTP S P T P
Sbjct: 74 STPTLTPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPT 133
Query: 328 PAPGTEPVPGLELGLELEP--VPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P + P L P P L P P++TP S P P P P ++P
Sbjct: 134 LTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRP 188
Score = 45.4 bits (106), Expect = 3e-04
Identities = 31/115 (26%), Positives = 41/115 (35%), Gaps = 2/115 (1%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L + S + P+ P LTP S P T P
Sbjct: 122 STPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPT 181
Query: 328 PAPGTEPVPGLELGLELEP--VPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P + P+ L P P L P P++TP + P P P P + P
Sbjct: 182 LTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTP 236
Score = 45.1 bits (105), Expect = 4e-04
Identities = 33/123 (26%), Positives = 41/123 (33%), Gaps = 10/123 (8%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L P + S + P+ P LTP S P T P
Sbjct: 58 SPPTLTPSNTPTLTPCSTPTLTPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPT 117
Query: 328 PAPGTEP----------VPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPG 377
P + P P L P L P P++TP S P P P P
Sbjct: 118 LTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPS 177
Query: 378 AQP 380
+ P
Sbjct: 178 STP 180
Score = 44.3 bits (103), Expect = 7e-04
Identities = 31/115 (26%), Positives = 40/115 (34%), Gaps = 2/115 (1%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L P + S + P+ P LTP S P T P
Sbjct: 130 STPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPI 189
Query: 328 PAPGTEPV--PGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
+ P P L P L P P++ P S P P P P ++P
Sbjct: 190 LTRSSTPTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSRP 244
Score = 42.0 bits (97), Expect = 0.003
Identities = 30/117 (25%), Positives = 40/117 (34%), Gaps = 2/117 (1%)
Query: 266 QVSEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFA 325
++ P P T+ P L P + + P+ P LTP S P T
Sbjct: 48 EMGTPTLTPSSPPTLTPSNTPTLTPCSTPTLTPCSTPTLTPSNTPTLTPSSTPTLTPSST 107
Query: 326 PGPAPGTEP--VPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQP 380
P P + P P L P L P P++T S P P P P + P
Sbjct: 108 PTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPTLTPSSTP 164
Score = 41.2 bits (95), Expect = 0.006
Identities = 33/119 (27%), Positives = 41/119 (34%), Gaps = 6/119 (5%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L P + S + P+ P LT S P T P
Sbjct: 146 STPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPT 205
Query: 328 PAPGTEPV--PGLELGLELEPVPALGPVPGPSVTPGSLP----APWPVLGPVPAPGAQP 380
P + P P L P L P P++TP S P + P L P P P
Sbjct: 206 LTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTRSSTPTLTPSSTPTLTP 264
Score = 40.8 bits (94), Expect = 0.007
Identities = 27/101 (26%), Positives = 34/101 (33%), Gaps = 6/101 (5%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P + P L P + S + P+ P L P S P T P
Sbjct: 178 STPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPT 237
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWP 368
P + P L P L P P++TP S P P
Sbjct: 238 LTPSSRPT------LTRSSTPTLTPSSTPTLTPSSTPTLTP 272
Score = 37.0 bits (84), Expect = 0.11
Identities = 26/96 (27%), Positives = 33/96 (34%), Gaps = 14/96 (14%)
Query: 268 SEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPG 327
S P P T+ P L P + S + P+ P LTP S P T P
Sbjct: 194 STPTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTRSSTPT 253
Query: 328 PAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSL 363
P + P L P P++TP SL
Sbjct: 254 LTPSS--------------TPTLTPSSTPTLTPSSL 275
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 48.9 bits (115), Expect = 3e-05
Identities = 45/180 (25%), Positives = 62/180 (34%), Gaps = 5/180 (2%)
Query: 306 PAQPPAL---TPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGS 362
PA+PP TP+ +P APG P + G P GP + G
Sbjct: 407 PAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGP 466
Query: 363 LPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSR 422
P + GP P QP P P P P P P G +P+ QP
Sbjct: 467 TKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGS 526
Query: 423 APPPATEFGSLWPRPLQPYQSRQGEALQLAAVQVKGEENDV--PSLRGLRERARKDGAPK 480
PP+ + GS P QP ++ V G + P++ ++ G PK
Sbjct: 527 TKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQGLPK 586
Score = 48.5 bits (114), Expect = 4e-05
Identities = 65/262 (24%), Positives = 85/262 (32%), Gaps = 38/262 (14%)
Query: 303 AQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALG------PVPGP 356
A+ PAQP LT A T P PGT P LG P G PGP
Sbjct: 329 AKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGP 388
Query: 357 SV---TPGSLPAPWPVLGPVPAPGAQ---PPPLGDWPAL--------PRRWPLPQGWP-- 400
PG P GP P Q P PL P L P + P+ Q P
Sbjct: 389 KALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGK 448
Query: 401 ------RVGSWPLWDLGVLRPTQPQPSRAPPPATEFGSLWPRPLQPYQSRQGEALQLAAV 454
G G +P P A PP + G P P QP ++
Sbjct: 449 IPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPS------- 501
Query: 455 QVKGEENDVPSLRG-LRERARKDGAPKDRTRKDGVPKDRGGKDVDPKDRAHKDDVPKDR- 512
Q G P G + ++ G+ K +++ G K + K A + P +
Sbjct: 502 QQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQT 561
Query: 513 -GGKDVDPKDRAHKDDVPKDRG 533
GK + P + P +G
Sbjct: 562 GSGKPLQPPTVSPSAKQPPSQG 583
Score = 42.7 bits (99), Expect = 0.002
Identities = 42/159 (26%), Positives = 56/159 (35%), Gaps = 23/159 (14%)
Query: 289 LPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVP 348
L + A + + Q+P ++ PG T+ GP +PG +P
Sbjct: 427 LQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQP-- 484
Query: 349 ALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLW 408
GP P PGS P G P QP P P P P P
Sbjct: 485 --GPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQP-------- 534
Query: 409 DLGVLRPTQPQPSRAPP-------PATEFGSLWPRPLQP 440
G +P+ QPS A P P ++ GS +PLQP
Sbjct: 535 --GSAKPSAQQPSPAKPSAQQSTKPVSQTGS--GKPLQP 569
Score = 40.8 bits (94), Expect = 0.007
Identities = 65/269 (24%), Positives = 91/269 (33%), Gaps = 40/269 (14%)
Query: 306 PAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPA 365
P +PPA P PGPA GL L +P G V P PG+
Sbjct: 311 PGKPPAQQPGHEKS-----QPGPAKPPAQPSGLTKPLAQQP----GTVKPPVQPPGTTKP 361
Query: 366 PWPVLGPVPAPGAQ---PPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSR 422
P LGP P Q P + P P+ P P VG P QP
Sbjct: 362 PAQPLGPAKPPAQQTGSEKPSSEQPG-PKALAQP---PGVGKTP----------AQQPGP 407
Query: 423 APPPATEFGSLWPRPLQPYQSRQGEALQLAAVQVKGEE---NDVPSLRG--LRERARKDG 477
A PP + G+ P+PL Q A + ++ +P+ + + A++ G
Sbjct: 408 AKPPTQQVGT--PKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTG 465
Query: 478 APKDRTRKDG---VPKDRGGKDVDPKDRAHKDDVPKDRGGKDVDPKDRAHKDDVPKDRGG 534
K ++ G P + G P + P + G P + + G
Sbjct: 466 PTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPG 525
Query: 535 KDGDPKDRVG--KDGA--PKEAQPKAPQS 559
P + G K A P A+P A QS
Sbjct: 526 STKPPSQQPGSAKPSAQQPSPAKPSAQQS 554
Score = 36.6 bits (83), Expect = 0.14
Identities = 56/238 (23%), Positives = 81/238 (34%), Gaps = 26/238 (10%)
Query: 225 HDAMFTSEIGSSPLDLWQSVEQLPEAALAQTTKYLEATRAIQVSEPVQ-------NPQLL 277
H + S++ SS ++ SV PE +A T + I +PV+ N +L
Sbjct: 2261 HIVISLSDMASSIIE---SVVPKPEGPVADT---VSTDLLISEKDPVKKAKKETGNGIIL 2314
Query: 278 QTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPG 337
+ + Y + L + ++S + P P TT F G G E P
Sbjct: 2315 EVLEAYRDKKELEAERTKSSLSETVFDHPPSSVIALPMKEQLSTTYFTSGETFGQEK-PA 2373
Query: 338 LELGLELEPVPALGPVPGPSVTPGSL------------PAPWPVLGPVPAPGAQPPPLGD 385
+L V +L P P SL P P P P P P PPP
Sbjct: 2374 SQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSP 2433
Query: 386 WPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPPPATEFGSLWPRPLQPYQS 443
P + + L P + PL+D T P T + P P+ P S
Sbjct: 2434 KPTILPKKKLTVASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPS 2491
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 48.9 bits (115), Expect = 3e-05
Identities = 45/180 (25%), Positives = 62/180 (34%), Gaps = 5/180 (2%)
Query: 306 PAQPPAL---TPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGS 362
PA+PP TP+ +P APG P + G P GP + G
Sbjct: 407 PAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGP 466
Query: 363 LPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSR 422
P + GP P QP P P P P P P G +P+ QP
Sbjct: 467 TKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGS 526
Query: 423 APPPATEFGSLWPRPLQPYQSRQGEALQLAAVQVKGEENDV--PSLRGLRERARKDGAPK 480
PP+ + GS P QP ++ V G + P++ ++ G PK
Sbjct: 527 TKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQGLPK 586
Score = 48.5 bits (114), Expect = 4e-05
Identities = 65/262 (24%), Positives = 85/262 (32%), Gaps = 38/262 (14%)
Query: 303 AQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALG------PVPGP 356
A+ PAQP LT A T P PGT P LG P G PGP
Sbjct: 329 AKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGP 388
Query: 357 SV---TPGSLPAPWPVLGPVPAPGAQ---PPPLGDWPAL--------PRRWPLPQGWP-- 400
PG P GP P Q P PL P L P + P+ Q P
Sbjct: 389 KALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGK 448
Query: 401 ------RVGSWPLWDLGVLRPTQPQPSRAPPPATEFGSLWPRPLQPYQSRQGEALQLAAV 454
G G +P P A PP + G P P QP ++
Sbjct: 449 IPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPS------- 501
Query: 455 QVKGEENDVPSLRG-LRERARKDGAPKDRTRKDGVPKDRGGKDVDPKDRAHKDDVPKDR- 512
Q G P G + ++ G+ K +++ G K + K A + P +
Sbjct: 502 QQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQT 561
Query: 513 -GGKDVDPKDRAHKDDVPKDRG 533
GK + P + P +G
Sbjct: 562 GSGKPLQPPTVSPSAKQPPSQG 583
Score = 42.7 bits (99), Expect = 0.002
Identities = 42/159 (26%), Positives = 56/159 (35%), Gaps = 23/159 (14%)
Query: 289 LPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVP 348
L + A + + Q+P ++ PG T+ GP +PG +P
Sbjct: 427 LQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQP-- 484
Query: 349 ALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRWPLPQGWPRVGSWPLW 408
GP P PGS P G P QP P P P P P
Sbjct: 485 --GPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQP-------- 534
Query: 409 DLGVLRPTQPQPSRAPP-------PATEFGSLWPRPLQP 440
G +P+ QPS A P P ++ GS +PLQP
Sbjct: 535 --GSAKPSAQQPSPAKPSAQQSTKPVSQTGS--GKPLQP 569
Score = 40.8 bits (94), Expect = 0.007
Identities = 65/269 (24%), Positives = 91/269 (33%), Gaps = 40/269 (14%)
Query: 306 PAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPA 365
P +PPA P PGPA GL L +P G V P PG+
Sbjct: 311 PGKPPAQQPGHEKS-----QPGPAKPPAQPSGLTKPLAQQP----GTVKPPVQPPGTTKP 361
Query: 366 PWPVLGPVPAPGAQ---PPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSR 422
P LGP P Q P + P P+ P P VG P QP
Sbjct: 362 PAQPLGPAKPPAQQTGSEKPSSEQPG-PKALAQP---PGVGKTP----------AQQPGP 407
Query: 423 APPPATEFGSLWPRPLQPYQSRQGEALQLAAVQVKGEE---NDVPSLRG--LRERARKDG 477
A PP + G+ P+PL Q A + ++ +P+ + + A++ G
Sbjct: 408 AKPPTQQVGT--PKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTG 465
Query: 478 APKDRTRKDG---VPKDRGGKDVDPKDRAHKDDVPKDRGGKDVDPKDRAHKDDVPKDRGG 534
K ++ G P + G P + P + G P + + G
Sbjct: 466 PTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPG 525
Query: 535 KDGDPKDRVG--KDGA--PKEAQPKAPQS 559
P + G K A P A+P A QS
Sbjct: 526 STKPPSQQPGSAKPSAQQPSPAKPSAQQS 554
Score = 36.6 bits (83), Expect = 0.14
Identities = 56/238 (23%), Positives = 81/238 (34%), Gaps = 26/238 (10%)
Query: 225 HDAMFTSEIGSSPLDLWQSVEQLPEAALAQTTKYLEATRAIQVSEPVQ-------NPQLL 277
H + S++ SS ++ SV PE +A T + I +PV+ N +L
Sbjct: 2261 HIVISLSDMASSIIE---SVVPKPEGPVADT---VSTDLLISEKDPVKKAKKETGNGIIL 2314
Query: 278 QTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPG 337
+ + Y + L + ++S + P P TT F G G E P
Sbjct: 2315 EVLEAYRDKKELEAERTKSSLSETVFDHPPSSVIALPMKEQLSTTYFTSGETFGQEK-PA 2373
Query: 338 LELGLELEPVPALGPVPGPSVTPGSL------------PAPWPVLGPVPAPGAQPPPLGD 385
+L V +L P P SL P P P P P P PPP
Sbjct: 2374 SQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSP 2433
Query: 386 WPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPPPATEFGSLWPRPLQPYQS 443
P + + L P + PL+D T P T + P P+ P S
Sbjct: 2434 KPTILPKKKLTVASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPS 2491
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 48.9 bits (115), Expect = 3e-05
Identities = 54/186 (29%), Positives = 62/186 (33%), Gaps = 35/186 (18%)
Query: 266 QVSEPVQNPQLLQTVWHYEVPELLPEGSSAQAVSLSRAQEPAQPP--ALTPESAPGCTTE 323
Q P Q P Q H P P + Q+P PP + P A G
Sbjct: 69 QQQPPPQQPPPQQPPPHQPPPHPQPH----------QQQQPPPPPQDSSKPVVAQG---- 114
Query: 324 FAPGPAPGTEPVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGA----- 378
PGPAPG P P G PG PG P P P + P PGA
Sbjct: 115 --PGPAPGVGSAPPASSSAPPATPPTSGAPPGSG--PGPTPTPPPAVTSAP-PGAPPPTP 169
Query: 379 -------QPPPLGDWPALPRRWPLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPPPATEFG 431
PP G P P P P P+ G P G P P+P P +T G
Sbjct: 170 PSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGG 229
Query: 432 SLWPRP 437
P+P
Sbjct: 230 H--PKP 233
Score = 36.2 bits (82), Expect = 0.18
Identities = 31/90 (34%), Positives = 35/90 (38%), Gaps = 11/90 (12%)
Query: 293 SSAQAVSLSRAQEPAQPPALTPESAPGCTTEFAPGPAPGTEPVPGLELGLELEPVPALGP 352
SS + +A P PPA P PGP P P PG G ++ P G
Sbjct: 171 SSGVPTTPPQAGGPPPPPAAVP----------GPGPGPKQGPGPGGPKGGKMPGGPKPGG 220
Query: 353 VPGPSVTPGSLPAPWPVLGPVPAPGAQPPP 382
PG S TPG P P G P G Q P
Sbjct: 221 GPGLS-TPGGHPKPPHRGGGEPRGGRQHHP 249
Score = 33.5 bits (75), Expect = 1.2
Identities = 30/102 (29%), Positives = 38/102 (37%), Gaps = 9/102 (8%)
Query: 334 PVPGLELGLELEPVPALGPVPGPSVTPGSLPAPWPVLGPVPAPGAQPPPLGDWPALPRRW 393
P PG+ L P +GP PG S +P P P P QPPP P P
Sbjct: 34 PPPGMGLNQNRGP---MGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPH 90
Query: 394 PLPQGWPRVGSWPLWDLGVLRPTQPQPSRAPPPATEFGSLWP 435
P P + P ++P ++ P PA GS P
Sbjct: 91 PQPHQQQQPPPPP------QDSSKPVVAQGPGPAPGVGSAPP 126
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,317,396
Number of Sequences: 37866
Number of extensions: 2914677
Number of successful extensions: 23652
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 1102
Number of HSP's that attempted gapping in prelim test: 14641
Number of HSP's gapped (non-prelim): 6230
length of query: 1141
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1028
effective length of database: 13,968,660
effective search space: 14359782480
effective search space used: 14359782480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.