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Search of human proteins with 221316645
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|221316645 UBA domain containing 2 isoform 1 [Homo sapiens]
(344 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|221316645 UBA domain containing 2 isoform 1 [Homo sapiens] 687 0.0
gi|29366838 UBA domain containing 2 isoform 2 [Homo sapiens] 430 e-121
gi|148727247 ubiquitin specific peptidase 5 isoform 2 [Homo sapi... 42 6e-04
gi|148727331 ubiquitin specific peptidase 5 isoform 1 [Homo sapi... 42 6e-04
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 40 0.004
gi|215598688 ubiquitin thiolesterase 13 [Homo sapiens] 39 0.005
gi|55770884 ubiquitin associated domain containing 1 [Homo sapiens] 35 0.098
gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens] 32 0.63
gi|54607139 vacuolar protein sorting 13D isoform 1 [Homo sapiens] 32 0.63
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 32 1.1
gi|4506387 UV excision repair protein RAD23 homolog B [Homo sapi... 32 1.1
gi|44680148 solute carrier family 23 (nucleobase transporters), ... 31 1.8
gi|40316845 solute carrier family 23 (nucleobase transporters), ... 31 1.8
gi|225703108 tudor domain containing 3 isoform 2 [Homo sapiens] 31 1.8
gi|225703106 tudor domain containing 3 isoform 1 [Homo sapiens] 31 1.8
gi|13540576 tudor domain containing 3 isoform 2 [Homo sapiens] 31 1.8
gi|4826964 UV excision repair protein RAD23 homolog A [Homo sapi... 30 2.4
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 30 3.2
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 30 3.2
gi|221139761 zinc finger protein 853 [Homo sapiens] 29 5.4
gi|15208660 tripartite motif protein 21 [Homo sapiens] 29 5.4
gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo ... 29 5.4
gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo s... 29 5.4
gi|55741571 leucine rich repeat and fibronectin type III domain ... 28 9.2
gi|217272865 myotubularin related protein 4 [Homo sapiens] 28 9.2
gi|110347429 mediator complex subunit 12 [Homo sapiens] 28 9.2
gi|31542779 tripartite motif family-like 1 [Homo sapiens] 28 9.2
gi|94536782 tripartite motif-containing 35 isoform 2 [Homo sapiens] 28 9.2
>gi|221316645 UBA domain containing 2 isoform 1 [Homo sapiens]
Length = 344
Score = 687 bits (1773), Expect = 0.0
Identities = 344/344 (100%), Positives = 344/344 (100%)
Query: 1 MFTSTGSSGLYKAPLSKSLLLVPSALSLLLALLLPHCQKLFVYDLHAVKNDFQIWRLICG 60
MFTSTGSSGLYKAPLSKSLLLVPSALSLLLALLLPHCQKLFVYDLHAVKNDFQIWRLICG
Sbjct: 1 MFTSTGSSGLYKAPLSKSLLLVPSALSLLLALLLPHCQKLFVYDLHAVKNDFQIWRLICG 60
Query: 61 RIICLDLKDTFCSSLLIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLIEAMQYFFGI 120
RIICLDLKDTFCSSLLIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLIEAMQYFFGI
Sbjct: 61 RIICLDLKDTFCSSLLIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLIEAMQYFFGI 120
Query: 121 TAASNLPSGFLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW 180
TAASNLPSGFLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW
Sbjct: 121 TAASNLPSGFLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW 180
Query: 181 IVAISGLMSGLCYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATLD 240
IVAISGLMSGLCYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATLD
Sbjct: 181 IVAISGLMSGLCYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATLD 240
Query: 241 IQRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAA 300
IQRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAA
Sbjct: 241 IQRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAA 300
Query: 301 PPLEVSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQH 344
PPLEVSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQH
Sbjct: 301 PPLEVSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQH 344
>gi|29366838 UBA domain containing 2 isoform 2 [Homo sapiens]
Length = 309
Score = 430 bits (1106), Expect = e-121
Identities = 215/225 (95%), Positives = 218/225 (96%)
Query: 120 ITAASNLPSGFLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYI 179
+T + + LAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYI
Sbjct: 85 MTFTQSRTTSSLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYI 144
Query: 180 WIVAISGLMSGLCYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATL 239
WIVAISGLMSGLCYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATL
Sbjct: 145 WIVAISGLMSGLCYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATL 204
Query: 240 DIQRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPA 299
DIQRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPA
Sbjct: 205 DIQRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPA 264
Query: 300 APPLEVSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQH 344
APPLEVSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQH
Sbjct: 265 APPLEVSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQH 309
>gi|148727247 ubiquitin specific peptidase 5 isoform 2 [Homo
sapiens]
Length = 835
Score = 42.4 bits (98), Expect = 6e-04
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 293 GRQSEPAAPPLEVSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQH 344
G S A PP E+ V ++ MGFSR AL+ALRA+NN L A +++ H
Sbjct: 691 GSTSAAADPP---PEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH 739
>gi|148727331 ubiquitin specific peptidase 5 isoform 1 [Homo
sapiens]
Length = 858
Score = 42.4 bits (98), Expect = 6e-04
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 293 GRQSEPAAPPLEVSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQH 344
G S A PP E+ V ++ MGFSR AL+ALRA+NN L A +++ H
Sbjct: 714 GSTSAAADPP---PEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH 762
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 39.7 bits (91), Expect = 0.004
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 6/54 (11%)
Query: 291 QGGRQSEPAAPPLEVSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQH 344
+GG + EP +V+++Q+ +LM+MGF+R A+EAL + + + AT +LL H
Sbjct: 1308 EGGSRREP-----QVNQQQLQQLMDMGFTREHAMEAL-LNTSTMEQATEYLLTH 1355
>gi|215598688 ubiquitin thiolesterase 13 [Homo sapiens]
Length = 863
Score = 39.3 bits (90), Expect = 0.005
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 307 EEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQH 344
EE VA + MGF R A++ALRA+NN+L A +++ H
Sbjct: 730 EEIVAIITSMGFQRNQAIQALRATNNNLERALDWIFSH 767
>gi|55770884 ubiquitin associated domain containing 1 [Homo sapiens]
Length = 405
Score = 35.0 bits (79), Expect = 0.098
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 310 VARLMEMGFSRGDALEALRASNNDLNVATNFLL 342
V LMEMGF + ++ALR +NN N A +LL
Sbjct: 294 VISLMEMGFDEKEVIDALRVNNNQQNAACEWLL 326
>gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens]
Length = 4363
Score = 32.3 bits (72), Expect = 0.63
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 305 VSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQH 344
V E Q+ARL E+GFS D +AL A L A ++L ++
Sbjct: 2637 VLELQLARLQELGFSMDDCRKALLACQGQLKKAASWLFKN 2676
>gi|54607139 vacuolar protein sorting 13D isoform 1 [Homo sapiens]
Length = 4388
Score = 32.3 bits (72), Expect = 0.63
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 305 VSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQH 344
V E Q+ARL E+GFS D +AL A L A ++L ++
Sbjct: 2637 VLELQLARLQELGFSMDDCRKALLACQGQLKKAASWLFKN 2676
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 31.6 bits (70), Expect = 1.1
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 242 QRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNR--LFPPLRQRQNVNYQGGRQSEP 298
Q QQ+ + L +Q Q ++Q+QQQ G++N +R L P +Q+Q V G ++P
Sbjct: 3947 QLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQVALGPGMPAKP 4005
>gi|4506387 UV excision repair protein RAD23 homolog B [Homo
sapiens]
Length = 409
Score = 31.6 bits (70), Expect = 1.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 307 EEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQ 343
+E + RL +GF G ++A A + N+A NFLLQ
Sbjct: 367 KEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQ 403
Score = 31.2 bits (69), Expect = 1.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 307 EEQVARLMEMGFSRGDALEALRASNNDLNVATNFLL 342
E V +M MG+ R + ALRAS N+ + A +LL
Sbjct: 191 ENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLL 226
>gi|44680148 solute carrier family 23 (nucleobase transporters),
member 2 [Homo sapiens]
Length = 650
Score = 30.8 bits (68), Expect = 1.8
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 96 LLGSWVLSALF---DFLLIEAMQYFFGITAASNLPSGFL--APVFALFVPFYCSIPRVQV 150
+L SW+L +F D ++ +Y G A ++ G L AP F + PF +P V
Sbjct: 320 ILVSWLLCFIFTVTDVFPPDSTKY--GFYARTDARQGVLLVAPWFKVPYPFQWGLPTVSA 377
Query: 151 AQILGPLSITNKTLIYILG 169
A ++G LS ++I +G
Sbjct: 378 AGVIGMLSAVVASIIESIG 396
>gi|40316845 solute carrier family 23 (nucleobase transporters),
member 2 [Homo sapiens]
Length = 650
Score = 30.8 bits (68), Expect = 1.8
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 96 LLGSWVLSALF---DFLLIEAMQYFFGITAASNLPSGFL--APVFALFVPFYCSIPRVQV 150
+L SW+L +F D ++ +Y G A ++ G L AP F + PF +P V
Sbjct: 320 ILVSWLLCFIFTVTDVFPPDSTKY--GFYARTDARQGVLLVAPWFKVPYPFQWGLPTVSA 377
Query: 151 AQILGPLSITNKTLIYILG 169
A ++G LS ++I +G
Sbjct: 378 AGVIGMLSAVVASIIESIG 396
>gi|225703108 tudor domain containing 3 isoform 2 [Homo sapiens]
Length = 651
Score = 30.8 bits (68), Expect = 1.8
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 305 VSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLL 342
V E+ + + EMGFS+ + +AL + N+L A N LL
Sbjct: 194 VDEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLL 231
>gi|225703106 tudor domain containing 3 isoform 1 [Homo sapiens]
Length = 744
Score = 30.8 bits (68), Expect = 1.8
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 305 VSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLL 342
V E+ + + EMGFS+ + +AL + N+L A N LL
Sbjct: 287 VDEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLL 324
>gi|13540576 tudor domain containing 3 isoform 2 [Homo sapiens]
Length = 651
Score = 30.8 bits (68), Expect = 1.8
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 305 VSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLL 342
V E+ + + EMGFS+ + +AL + N+L A N LL
Sbjct: 194 VDEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLL 231
>gi|4826964 UV excision repair protein RAD23 homolog A [Homo
sapiens]
Length = 363
Score = 30.4 bits (67), Expect = 2.4
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 293 GRQSEPAAPPLEVSEEQ--VARLMEMGFSRGDALEALRASNNDLNVATNFLL 342
GR+ + A+ + SE + + +M MG+ R + ALRAS N+ + A +LL
Sbjct: 148 GREEDAASTLVTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLL 199
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 30.0 bits (66), Expect = 3.2
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 242 QRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNR--------LFPPLRQRQNVNYQGG 293
Q+QQ+ + +Q Q Q + Q+QQQ ++N+NR P Q+ V GG
Sbjct: 226 QQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGG 285
Query: 294 RQSEPAAP 301
R S PA P
Sbjct: 286 RPS-PAPP 292
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 30.0 bits (66), Expect = 3.2
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 242 QRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNR--------LFPPLRQRQNVNYQGG 293
Q+QQ+ + +Q Q Q + Q+QQQ ++N+NR P Q+ V GG
Sbjct: 226 QQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGG 285
Query: 294 RQSEPAAP 301
R S PA P
Sbjct: 286 RPS-PAPP 292
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 29.3 bits (64), Expect = 5.4
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 15/82 (18%)
Query: 244 QQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAAPPL 303
+Q+ L +QL+ Q Q ++Q+QQQ L Q+Q Q Q + PPL
Sbjct: 268 EQQQAQLQQQLLLQQQEQLQQQQQQQ------------LLQQQQEQLQ---QQQLQPPPL 312
Query: 304 EVSEEQVARLMEMGFSRGDALE 325
E EE+ L M G E
Sbjct: 313 EPEEEEEVELELMPVDLGSEQE 334
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 29.3 bits (64), Expect = 5.4
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 167 ILGLQLFTSGSYIWIVAISGLMS---GLCYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFS 223
+LG Q F SG + W V ++G + G+C DS + H +L S + W + +
Sbjct: 331 VLGAQHFHSGKHYWEVDVTGKEAWDLGVCRDSVRRKGHFLLSSKSGFWTIWLWNKQKYEA 390
Query: 224 SSEP 227
+ P
Sbjct: 391 GTYP 394
>gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo
sapiens]
Length = 1726
Score = 29.3 bits (64), Expect = 5.4
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 310 VARLMEMGFSRGDALEALRASNNDLNVATNFLLQ 343
+ +L +MGF R A EAL+++N +L+ A + LL+
Sbjct: 941 IKQLTDMGFPREPAEEALKSNNMNLDQAMSALLE 974
>gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo
sapiens]
Length = 1690
Score = 29.3 bits (64), Expect = 5.4
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 310 VARLMEMGFSRGDALEALRASNNDLNVATNFLLQ 343
+ +L +MGF R A EAL+++N +L+ A + LL+
Sbjct: 944 IKQLTDMGFPREPAEEALKSNNMNLDQAMSALLE 977
>gi|55741571 leucine rich repeat and fibronectin type III domain
containing 2 [Homo sapiens]
Length = 789
Score = 28.5 bits (62), Expect = 9.2
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 216 WTLEPIFSSSEPTSEARIGMGATLDIQRQQRMELLD 251
W + P +P+ + +G A+LD++ Q++ ELLD
Sbjct: 640 WRIPPSAPRPKPSLDRLMGAFASLDLKSQRKEELLD 675
>gi|217272865 myotubularin related protein 4 [Homo sapiens]
Length = 1195
Score = 28.5 bits (62), Expect = 9.2
Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 35 PHCQKLFV--YDLHAVKNDFQIWRLICGRI 62
P+C+ +F+ ++HA++N FQ R +C ++
Sbjct: 334 PNCEVVFMGMANIHAIRNSFQYLRAVCSQM 363
>gi|110347429 mediator complex subunit 12 [Homo sapiens]
Length = 2177
Score = 28.5 bits (62), Expect = 9.2
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 241 IQRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAA 300
I++QQ+ ++L +Q Q Q ++Q+QQQ +Q+Q +Q + AA
Sbjct: 2079 IRQQQQQQILRQQQQQQQQQQQQQQQQQQ-------------QQQQQQQQHQQQQQQQAA 2125
Query: 301 PPLEVSEEQ 309
PP + Q
Sbjct: 2126 PPQPQPQSQ 2134
>gi|31542779 tripartite motif family-like 1 [Homo sapiens]
Length = 468
Score = 28.5 bits (62), Expect = 9.2
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 167 ILGLQLFTSGSYIWIVAISGLMS---GLCYDS 195
+LG Q+FTSG + W V + G+C DS
Sbjct: 330 VLGTQIFTSGRHYWEVEVGNKTEWEVGICKDS 361
>gi|94536782 tripartite motif-containing 35 isoform 2 [Homo sapiens]
Length = 493
Score = 28.5 bits (62), Expect = 9.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 167 ILGLQLFTSGSYIWIVAISGLMS 189
+LG ++F+ GS+ W VA+ GL S
Sbjct: 345 LLGSRVFSQGSHAWEVALGGLQS 367
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.139 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,339,600
Number of Sequences: 37866
Number of extensions: 522906
Number of successful extensions: 1844
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1783
Number of HSP's gapped (non-prelim): 64
length of query: 344
length of database: 18,247,518
effective HSP length: 103
effective length of query: 241
effective length of database: 14,347,320
effective search space: 3457704120
effective search space used: 3457704120
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.