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Search of human proteins with 22035562
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22035562 RNA polymerase III transcription initiation factor
BRF2 [Homo sapiens]
(419 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22035562 RNA polymerase III transcription initiation factor B... 846 0.0
gi|4504193 general transcription factor IIB [Homo sapiens] 57 3e-08
gi|22035556 transcription initiation factor IIIB isoform 1 [Homo... 52 1e-06
gi|90403598 mesoderm posterior 2 homolog [Homo sapiens] 34 0.22
gi|130502140 NEZHA isoform 2 [Homo sapiens] 34 0.28
gi|122937255 NEZHA isoform 1 [Homo sapiens] 34 0.28
gi|108773787 retinoblastoma 1 [Homo sapiens] 33 0.63
gi|59853352 myosin VIIA and Rab interacting protein [Homo sapiens] 31 1.8
gi|8923394 transmembrane protein 161A [Homo sapiens] 31 1.8
gi|40288199 hypothetical protein LOC219287 isoform 2 [Homo sapiens] 31 2.4
gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens] 31 2.4
gi|14150064 polymerase (RNA) III (DNA directed) polypeptide G (3... 30 3.1
gi|139394604 bromo adjacent homology domain containing 1 [Homo s... 30 4.1
gi|146134388 YLP motif containing 1 [Homo sapiens] 30 4.1
gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sap... 30 5.3
gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sap... 30 5.3
gi|197927133 hypothetical protein LOC84970 isoform a [Homo sapiens] 30 5.3
gi|17136078 VGF nerve growth factor inducible precursor [Homo sa... 30 5.3
gi|231571356 nitric oxide synthase 3 isoform 4 [Homo sapiens] 29 7.0
gi|231571329 nitric oxide synthase 3 isoform 3 [Homo sapiens] 29 7.0
gi|231571314 nitric oxide synthase 3 isoform 2 [Homo sapiens] 29 7.0
gi|40254422 nitric oxide synthase 3 isoform 1 [Homo sapiens] 29 7.0
gi|190684655 glucose transporter protein 10 isoform a [Homo sapi... 29 7.0
gi|68226420 glucose transporter protein 10 isoform c [Homo sapiens] 29 7.0
gi|68226418 glucose transporter protein 10 isoform b [Homo sapiens] 29 7.0
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 29 7.0
gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo ... 29 7.0
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 29 7.0
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 29 7.0
gi|71979665 growth factor receptor-bound protein 7 [Homo sapiens] 29 7.0
>gi|22035562 RNA polymerase III transcription initiation factor BRF2
[Homo sapiens]
Length = 419
Score = 846 bits (2185), Expect = 0.0
Identities = 419/419 (100%), Positives = 419/419 (100%)
Query: 1 MPGRGRCPDCGSTELVEDSHYSQSQLVCSDCGCVVTEGVLTTTFSDEGNLREVTYSRSTG 60
MPGRGRCPDCGSTELVEDSHYSQSQLVCSDCGCVVTEGVLTTTFSDEGNLREVTYSRSTG
Sbjct: 1 MPGRGRCPDCGSTELVEDSHYSQSQLVCSDCGCVVTEGVLTTTFSDEGNLREVTYSRSTG 60
Query: 61 ENEQVSRSQQRGLRRVRDLCRVLQLPPTFEDTAVAYYQQAYRHSGIRAARLQKKEVLVGC 120
ENEQVSRSQQRGLRRVRDLCRVLQLPPTFEDTAVAYYQQAYRHSGIRAARLQKKEVLVGC
Sbjct: 61 ENEQVSRSQQRGLRRVRDLCRVLQLPPTFEDTAVAYYQQAYRHSGIRAARLQKKEVLVGC 120
Query: 121 CVLITCRQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDVPSLCLAELVKTYCSSF 180
CVLITCRQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDVPSLCLAELVKTYCSSF
Sbjct: 121 CVLITCRQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDVPSLCLAELVKTYCSSF 180
Query: 181 KLFQASPSVPAKYVEDKEKMLSRTMQLVELANETWLVTGRHPLPVITAATFLAWQSLQPA 240
KLFQASPSVPAKYVEDKEKMLSRTMQLVELANETWLVTGRHPLPVITAATFLAWQSLQPA
Sbjct: 181 KLFQASPSVPAKYVEDKEKMLSRTMQLVELANETWLVTGRHPLPVITAATFLAWQSLQPA 240
Query: 241 DRLSCSLARFCKLANVDLPYPASSRLQELLAVLLRMAEQLAWLRVLRLDKRSVVKHIGDL 300
DRLSCSLARFCKLANVDLPYPASSRLQELLAVLLRMAEQLAWLRVLRLDKRSVVKHIGDL
Sbjct: 241 DRLSCSLARFCKLANVDLPYPASSRLQELLAVLLRMAEQLAWLRVLRLDKRSVVKHIGDL 300
Query: 301 LQHRQSLVRSAFRDGTAEVETREKEPPGWGQGQGEGEVGNNSLGLPQGKRPASPALLLPP 360
LQHRQSLVRSAFRDGTAEVETREKEPPGWGQGQGEGEVGNNSLGLPQGKRPASPALLLPP
Sbjct: 301 LQHRQSLVRSAFRDGTAEVETREKEPPGWGQGQGEGEVGNNSLGLPQGKRPASPALLLPP 360
Query: 361 CMLKSPKRICPVPPVSTVTGDENISDSEIEQYLRTPQEVRDFQRAQAARQAATSVPNPP 419
CMLKSPKRICPVPPVSTVTGDENISDSEIEQYLRTPQEVRDFQRAQAARQAATSVPNPP
Sbjct: 361 CMLKSPKRICPVPPVSTVTGDENISDSEIEQYLRTPQEVRDFQRAQAARQAATSVPNPP 419
>gi|4504193 general transcription factor IIB [Homo sapiens]
Length = 316
Score = 57.0 bits (136), Expect = 3e-08
Identities = 56/272 (20%), Positives = 99/272 (36%), Gaps = 58/272 (21%)
Query: 4 RGRCPDCGSTELVEDSHYSQSQLVCSDCGCVVTEGVLTT-----TFSDEGNLREVT---- 54
R CP+ LVED Y ++C +CG VV + V+ TFS++ ++ +
Sbjct: 12 RVTCPNHPDAILVED--YRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKATKDPSRVGD 69
Query: 55 --------------------------YSRSTGENEQVSRSQQRGL----RRVRDLCRVLQ 84
+ S +N + S R + + + + +
Sbjct: 70 SQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEITTMADRIN 129
Query: 85 LPPTFEDTAVAYYQQAYRHSGIRAARLQKKEVLVGCCVLITCRQHNWPLTMGAICTLLYA 144
LP D ++Q Y ++ + + + C+ I CRQ P T IC +
Sbjct: 130 LPRNIVDRTNNLFKQVYEQKSLKG---RANDAIASACLYIACRQEGVPRTFKEICAVSRI 186
Query: 145 DLDVFSSTYMQIVKLLGLDVPSLCLAELVKTYCSSFKLFQASPSVPAKYVEDKEKMLSRT 204
+ I+K L V + + + +CS+ L K+ ++ T
Sbjct: 187 SKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCL-------------PKQVQMAAT 233
Query: 205 MQLVELANETWLVTGRHPLPVITAATFLAWQS 236
+ A E LV GR P+ V AA ++A Q+
Sbjct: 234 -HIARKAVELDLVPGRSPISVAAAAIYMASQA 264
>gi|22035556 transcription initiation factor IIIB isoform 1 [Homo
sapiens]
Length = 677
Score = 52.0 bits (123), Expect = 1e-06
Identities = 54/250 (21%), Positives = 102/250 (40%), Gaps = 42/250 (16%)
Query: 7 CPDCGSTELVEDSHYSQSQLVCSDCGCVVTEGVLTTTF-----------------SDEGN 49
C CG T++ D+ ++ VC+ CG V+ + ++ + S +G
Sbjct: 6 CRGCGGTDIELDA--ARGDAVCTACGSVLEDNIIVSEVQFVESSGGGSSAVGQFVSLDGA 63
Query: 50 LREVTYSRSTGEN---EQVSRSQQRGLRRVRDLCRVLQLPPTFEDTAVAYYQQAY-RHSG 105
+ T N E +++ Q G R + L LQL DTA +++ A RH
Sbjct: 64 GKTPTLGGGFHVNLGKESRAQTLQNGRRHIHHLGNQLQLNQHCLDTAFNFFKMAVSRH-- 121
Query: 106 IRAARLQKKEVLVGCCVLITCRQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDVP 165
R +K ++ C+ + CR P + + LL ++ V T++ + + L ++ P
Sbjct: 122 --LTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAP 179
Query: 166 SL--CLAELVKTYCSSFKLFQASPSVPAKYVEDKEKMLSRTMQLVELANETWLVTGRHPL 223
++ CL Y F ++ E ++ ++L++ W+ TGR P
Sbjct: 180 AIDPCL------YIPRFAHL-------LEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPS 226
Query: 224 PVITAATFLA 233
+ AA +A
Sbjct: 227 GLCGAALLVA 236
>gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]
Length = 397
Score = 34.3 bits (77), Expect = 0.22
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 315 GTAEVETREK---EPPGWGQGQGEGEVGNNSLGLPQGKRPASPALLLPPCMLKSPKRICP 371
G AE +T+ + + G GQGQG+G+ G QG+RP + +L SP CP
Sbjct: 169 GPAEAQTQAEGQGQGQGQGQGQGQGQGQGQGQGQGQGRRPGLVSAVLAEASWGSPS-ACP 227
>gi|130502140 NEZHA isoform 2 [Homo sapiens]
Length = 1249
Score = 33.9 bits (76), Expect = 0.28
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 27/165 (16%)
Query: 259 PYPASSRLQELLAVLLRMAEQLAWLRVLRLDKRSVVKHIGDLLQHRQSLVRSAFRDGTAE 318
P SS + EL A R+ E+ R + KR + +HRQ L +SAF +
Sbjct: 593 PEALSSEMSELSA---RLEEKR---RAIEAQKRRIEAIFA---KHRQRLGKSAF----LQ 639
Query: 319 VETREKEPPGWGQGQGEGEVGNNSLGLPQGKRPASPALLLPPCMLKSPKRICPVPPVSTV 378
V+ RE G+ + E E ++ +P G+RPA P PK + P + V
Sbjct: 640 VQPREAS----GEAEAEAEEADSG-PVPGGERPAGEGQGEP---TSRPKAVTFSPDLGPV 691
Query: 379 ----TGDENISDSEIEQYLRTPQEVRDFQRAQAARQAATSVPNPP 419
G+ N + S++ L + Q RD QR +Q + P P
Sbjct: 692 PHEGLGEYNRAVSKLSAALSSLQ--RDMQRLTDQQQRLLAPPEAP 734
>gi|122937255 NEZHA isoform 1 [Homo sapiens]
Length = 1276
Score = 33.9 bits (76), Expect = 0.28
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 27/165 (16%)
Query: 259 PYPASSRLQELLAVLLRMAEQLAWLRVLRLDKRSVVKHIGDLLQHRQSLVRSAFRDGTAE 318
P SS + EL A R+ E+ R + KR + +HRQ L +SAF +
Sbjct: 620 PEALSSEMSELSA---RLEEKR---RAIEAQKRRIEAIFA---KHRQRLGKSAF----LQ 666
Query: 319 VETREKEPPGWGQGQGEGEVGNNSLGLPQGKRPASPALLLPPCMLKSPKRICPVPPVSTV 378
V+ RE G+ + E E ++ +P G+RPA P PK + P + V
Sbjct: 667 VQPREAS----GEAEAEAEEADSG-PVPGGERPAGEGQGEP---TSRPKAVTFSPDLGPV 718
Query: 379 ----TGDENISDSEIEQYLRTPQEVRDFQRAQAARQAATSVPNPP 419
G+ N + S++ L + Q RD QR +Q + P P
Sbjct: 719 PHEGLGEYNRAVSKLSAALSSLQ--RDMQRLTDQQQRLLAPPEAP 761
>gi|108773787 retinoblastoma 1 [Homo sapiens]
Length = 928
Score = 32.7 bits (73), Expect = 0.63
Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 21/134 (15%)
Query: 79 LCRVLQLPPTFEDTAVAYYQQAYRHSGIRAARLQKKEVLVGCCVLITCRQHNWPLTMGAI 138
LC+ L++P + A +++ G+ +QKK+ L G C+ I
Sbjct: 60 LCQKLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELWGICIFIAA------------ 107
Query: 139 CTLLYADLDVFSSTYMQIVKLLGLDVPSLCLAELVKTYCSSFKLFQASPSVPAKY--VED 196
DLD S T+ ++ K + + V L+K +S K+ A + KY +
Sbjct: 108 -----VDLDEMSFTFTELQKNIEISVHK--FFNLLKEIDTSTKVDNAMSRLLKKYDVLFA 160
Query: 197 KEKMLSRTMQLVEL 210
L RT +L+ L
Sbjct: 161 LFSKLERTCELIYL 174
>gi|59853352 myosin VIIA and Rab interacting protein [Homo sapiens]
Length = 859
Score = 31.2 bits (69), Expect = 1.8
Identities = 34/165 (20%), Positives = 66/165 (40%), Gaps = 30/165 (18%)
Query: 266 LQELLAVLLRMAEQLAWLRVLR-------LDKRSVVKHIGDLLQHRQSL--------VRS 310
+ + LAV LR+AE+ + + LDK++ ++ D H++ L ++
Sbjct: 187 VMDTLAVALRVAEEAIEEAISKAEAYGDSLDKQNEASYLRD---HKEELTEELATTILQK 243
Query: 311 AFRDGTAEVETREKEPPGWGQGQGEGEVGNNSLGLPQGKRPASPALLLPPCMLKSPKRIC 370
R ++ E + +E PGW Q + A P ++P +
Sbjct: 244 IIRKQKSKSEQQVEEEPGWPHPQS------------CSTKVADEGTSASPGGYRAPAALW 291
Query: 371 PVPPVSTVTGDENISDSEIEQYLRTPQEVRDFQRAQAARQAATSV 415
++TG+E + +E R P++ RA++A + SV
Sbjct: 292 RSQSAFSITGEEALKTPPVEAPSRQPRDQGQHPRAESALPSWKSV 336
>gi|8923394 transmembrane protein 161A [Homo sapiens]
Length = 479
Score = 31.2 bits (69), Expect = 1.8
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 93 AVAYYQQAYRHSG-IRAARLQKKEVLVGCCVLITCRQHNWPLTMGAICTLLYADLDVFS 150
A A +Q R +G I A +Q++ V V C V + Q+ PL + CTLL L +S
Sbjct: 341 AKARVEQLRREAGRIEAREIQQRVVRVYCYVTVVSLQYLTPLILTLNCTLLLKTLGGYS 399
>gi|40288199 hypothetical protein LOC219287 isoform 2 [Homo sapiens]
Length = 552
Score = 30.8 bits (68), Expect = 2.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 307 LVRSAFRDGTAEV---ETREKEPPGWGQGQGEGEVGNNSLGLPQGKRPASPAL 356
LVRS DG AEV E+ KE P G G G G + G P+ P +L
Sbjct: 100 LVRSRTHDGLAEVLVLESGRKEEPRGGGDSGGGGGGRPNPGPPRAAGPGGGSL 152
>gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens]
Length = 671
Score = 30.8 bits (68), Expect = 2.4
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 307 LVRSAFRDGTAEV---ETREKEPPGWGQGQGEGEVGNNSLGLPQGKRPASPAL 356
LVRS DG AEV E+ KE P G G G G + G P+ P +L
Sbjct: 100 LVRSRTHDGLAEVLVLESGRKEEPRGGGDSGGGGGGRPNPGPPRAAGPGGGSL 152
>gi|14150064 polymerase (RNA) III (DNA directed) polypeptide G
(32kD) like [Homo sapiens]
Length = 218
Score = 30.4 bits (67), Expect = 3.1
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 328 GWGQGQGEGEVGNNSLGLPQGKRPASPALLLPPCMLKSPKRICPVPPVSTVTGDENISDS 387
G G+G+G G++ N + GK A P L P L P PVP S G+E
Sbjct: 5 GGGRGRGRGQLTFNVEAVGIGKGDALPPPTLQPSPLFPPLEFRPVPLPS---GEEG---- 57
Query: 388 EIEQYLRTPQEVRDFQR 404
E L QE+R R
Sbjct: 58 --EYVLALKQELRGAMR 72
>gi|139394604 bromo adjacent homology domain containing 1 [Homo
sapiens]
Length = 780
Score = 30.0 bits (66), Expect = 4.1
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 333 QGEGEVGNNSLGLPQGKRPASPALLLPPCMLKS-PKRICPVPPVSTVTGDENI------- 384
+G +G LP+ PASPA L C + S P PVP + T T +
Sbjct: 478 EGCRSLGQLEFPLPEAGHPASPAHPLLGCPVPSVPPAAEPVPHLQTPTSEPQTVARACPQ 537
Query: 385 ---SDSEIEQYLRTPQEVRDFQRAQAARQ 410
S + LRT R R++AAR+
Sbjct: 538 SAKPPSGSKSGLRTGSSCRHTARSKAARR 566
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 30.0 bits (66), Expect = 4.1
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 346 PQGKRPASPALLLPPCMLKS--PKRICPVPPVSTVTGDENISDSEIEQYLRTPQEVRDFQ 403
P A P +LPP L S P + P+PP+S+ T I + Q + P ++
Sbjct: 593 PPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGI--PPQLTAAP 650
Query: 404 RAQAARQAATSVPNPP 419
A+ ++ VP P
Sbjct: 651 VPPASSSQSSQVPEKP 666
>gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo
sapiens]
Length = 1270
Score = 29.6 bits (65), Expect = 5.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 41 TTTFSDEGNLREVTYSRSTGENEQVSRSQQRGL 73
T++ SD+ + RE TY R + EN QV+ S+ + +
Sbjct: 209 TSSHSDKTHARETTYDRESFENPQVTPSEAQDM 241
>gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo
sapiens]
Length = 1216
Score = 29.6 bits (65), Expect = 5.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 41 TTTFSDEGNLREVTYSRSTGENEQVSRSQQRGL 73
T++ SD+ + RE TY R + EN QV+ S+ + +
Sbjct: 209 TSSHSDKTHARETTYDRESFENPQVTPSEAQDM 241
>gi|197927133 hypothetical protein LOC84970 isoform a [Homo sapiens]
Length = 598
Score = 29.6 bits (65), Expect = 5.3
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 331 QGQGEGEVGNNSLGLPQGKRPASPALLLPPCMLKSPKRICPVPPVSTVTGDE 382
+ GE EV +S P+G R +P +L PP + S +R P S + GD+
Sbjct: 139 ESSGELEVPGSS---PEGTRELAPCILAPPLVAGSNER----PRASIIVGDK 183
>gi|17136078 VGF nerve growth factor inducible precursor [Homo
sapiens]
Length = 615
Score = 29.6 bits (65), Expect = 5.3
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 322 REKEPPG-WGQGQGEGEVGNNSLGLPQGKRPASPALLLPPCMLKSPKRICPVPPVSTVTG 380
R PP G QG E +L L + R + +L P +SP+ P P + G
Sbjct: 92 RPASPPAPSGSQQGPEEEAAEAL-LTETVRSQTHSLPAP----ESPEPAAPPRPQTPENG 146
Query: 381 DENISDSE-IEQYLRTPQEVRDFQRAQAARQAATS 414
E SE +E QE+RDF + A RQ T+
Sbjct: 147 PEASDPSEELEALASLLQELRDFSPSSAKRQQETA 181
>gi|231571356 nitric oxide synthase 3 isoform 4 [Homo sapiens]
Length = 629
Score = 29.3 bits (64), Expect = 7.0
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 315 GTAEVETREKEPP-GWGQGQGEGEVGNNSLGLPQGKRPASPALLLPPCMLKSP 366
G + +E PP G G G G G G P + +PA LLPP SP
Sbjct: 2 GNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSP 54
>gi|231571329 nitric oxide synthase 3 isoform 3 [Homo sapiens]
Length = 614
Score = 29.3 bits (64), Expect = 7.0
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 315 GTAEVETREKEPP-GWGQGQGEGEVGNNSLGLPQGKRPASPALLLPPCMLKSP 366
G + +E PP G G G G G G P + +PA LLPP SP
Sbjct: 2 GNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSP 54
>gi|231571314 nitric oxide synthase 3 isoform 2 [Homo sapiens]
Length = 596
Score = 29.3 bits (64), Expect = 7.0
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 315 GTAEVETREKEPP-GWGQGQGEGEVGNNSLGLPQGKRPASPALLLPPCMLKSP 366
G + +E PP G G G G G G P + +PA LLPP SP
Sbjct: 2 GNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSP 54
>gi|40254422 nitric oxide synthase 3 isoform 1 [Homo sapiens]
Length = 1203
Score = 29.3 bits (64), Expect = 7.0
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 315 GTAEVETREKEPP-GWGQGQGEGEVGNNSLGLPQGKRPASPALLLPPCMLKSP 366
G + +E PP G G G G G G P + +PA LLPP SP
Sbjct: 2 GNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSP 54
>gi|190684655 glucose transporter protein 10 isoform a [Homo
sapiens]
Length = 503
Score = 29.3 bits (64), Expect = 7.0
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 30 DCG----CVVTEGVLTTTFSDEGNLREVTYSRSTGENEQVSRS----QQRGLRRVRDLCR 81
DCG C+ L + G L E+ R+ + + R Q R LRR +
Sbjct: 226 DCGDTEACLAALRRLRGSGDLAGELEELEEERAACQGCRARRPWELFQHRALRR--QVTS 283
Query: 82 VLQLPPTFE----DTAVAYYQQAYRHSGIRAARLQKKEVLVGCCVLIT 125
++ L E D+ AY +R +G+ A++Q + G C L+T
Sbjct: 284 LVVLGSAMELCGNDSVYAYASSVFRKAGVPEAKIQYAIIGTGSCELLT 331
>gi|68226420 glucose transporter protein 10 isoform c [Homo sapiens]
Length = 496
Score = 29.3 bits (64), Expect = 7.0
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 30 DCG----CVVTEGVLTTTFSDEGNLREVTYSRSTGENEQVSRS----QQRGLRRVRDLCR 81
DCG C+ L + G L E+ R+ + + R Q R LRR +
Sbjct: 219 DCGDTEACLAALRRLRGSGDLAGELEELEEERAACQGCRARRPWELFQHRALRR--QVTS 276
Query: 82 VLQLPPTFE----DTAVAYYQQAYRHSGIRAARLQKKEVLVGCCVLIT 125
++ L E D+ AY +R +G+ A++Q + G C L+T
Sbjct: 277 LVVLGSAMELCGNDSVYAYASSVFRKAGVPEAKIQYAIIGTGSCELLT 324
>gi|68226418 glucose transporter protein 10 isoform b [Homo sapiens]
Length = 499
Score = 29.3 bits (64), Expect = 7.0
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 30 DCG----CVVTEGVLTTTFSDEGNLREVTYSRSTGENEQVSRS----QQRGLRRVRDLCR 81
DCG C+ L + G L E+ R+ + + R Q R LRR +
Sbjct: 222 DCGDTEACLAALRRLRGSGDLAGELEELEEERAACQGCRARRPWELFQHRALRR--QVTS 279
Query: 82 VLQLPPTFE----DTAVAYYQQAYRHSGIRAARLQKKEVLVGCCVLIT 125
++ L E D+ AY +R +G+ A++Q + G C L+T
Sbjct: 280 LVVLGSAMELCGNDSVYAYASSVFRKAGVPEAKIQYAIIGTGSCELLT 327
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 29.3 bits (64), Expect = 7.0
Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 19/109 (17%)
Query: 326 PPGWGQGQGEGEVGNNSLGLPQ----------------GKRPASPALLLPPCMLKSPKRI 369
P GWG GQG +G + GLP G RP+ P PP P+R
Sbjct: 174 PRGWG-GQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRT 232
Query: 370 CPVPPVSTVTGDENISDSEIEQYLRTPQEVRDFQRAQAARQAATSVPNP 418
+ TG + + Q R VR+ R + A + ++ P
Sbjct: 233 RLLGSAERHTGRAAL--ARHGQLSRPHAAVRNSSRGRGAATSVSAAARP 279
>gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo
sapiens]
Length = 319
Score = 29.3 bits (64), Expect = 7.0
Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 320 ETREKEPPGWGQGQGEGEVGNNSLG----LPQGKRPASPALLLP-PCMLKSPKRICPVPP 374
E+RE EP G G S G PQG RP S AL L C + P C P
Sbjct: 81 ESREAEPGSGKTNAAWGWRGKRSDGGQTHQPQGPRPPSEALALEGSCAGRPPPPACS-PT 139
Query: 375 VSTVTGD 381
+ V GD
Sbjct: 140 CAVVCGD 146
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 29.3 bits (64), Expect = 7.0
Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 19/109 (17%)
Query: 326 PPGWGQGQGEGEVGNNSLGLPQ----------------GKRPASPALLLPPCMLKSPKRI 369
P GWG GQG +G + GLP G RP+ P PP P+R
Sbjct: 174 PRGWG-GQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRT 232
Query: 370 CPVPPVSTVTGDENISDSEIEQYLRTPQEVRDFQRAQAARQAATSVPNP 418
+ TG + + Q R VR+ R + A + ++ P
Sbjct: 233 RLLGSAERHTGRAAL--ARHGQLSRPHAAVRNSSRGRGAATSVSAAARP 279
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 29.3 bits (64), Expect = 7.0
Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 19/109 (17%)
Query: 326 PPGWGQGQGEGEVGNNSLGLPQ----------------GKRPASPALLLPPCMLKSPKRI 369
P GWG GQG +G + GLP G RP+ P PP P+R
Sbjct: 174 PRGWG-GQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRT 232
Query: 370 CPVPPVSTVTGDENISDSEIEQYLRTPQEVRDFQRAQAARQAATSVPNP 418
+ TG + + Q R VR+ R + A + ++ P
Sbjct: 233 RLLGSAERHTGRAAL--ARHGQLSRPHAAVRNSSRGRGAATSVSAAARP 279
>gi|71979665 growth factor receptor-bound protein 7 [Homo sapiens]
Length = 532
Score = 29.3 bits (64), Expect = 7.0
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 357 LLPPCMLKSPKRICPVP--PVSTVTGDENISDSEIE--QYLRTPQEVRDFQRAQAARQAA 412
L PP + SP+ +CP P P T + E++ Q L P R + + +
Sbjct: 5 LSPPHLSSSPEDLCPAPGTPPGTPRPPDTPLPEEVKRSQPLLIPTTGRKLREEERRATSL 64
Query: 413 TSVPNP 418
S+PNP
Sbjct: 65 PSIPNP 70
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,393,090
Number of Sequences: 37866
Number of extensions: 828628
Number of successful extensions: 2780
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 2750
Number of HSP's gapped (non-prelim): 47
length of query: 419
length of database: 18,247,518
effective HSP length: 105
effective length of query: 314
effective length of database: 14,271,588
effective search space: 4481278632
effective search space used: 4481278632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.