Search of human proteins with 115385972

Search of human proteins with 115385972

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens]
         (182 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens]       371   e-103
gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens]        371   e-103
gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens]        371   e-103
gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens]        371   e-103
gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo ...    98   3e-21
gi|4505893 proteolipid protein 2 (colonic epithelium-enriched) [...    65   4e-11
gi|82546841 chemokine-like factor superfamily 5 isoform c [Homo ...    59   3e-09
gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo ...    48   5e-06
gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo ...    48   5e-06
gi|8393581 chemokine-like factor isoform a [Homo sapiens]              42   2e-04
gi|8923370 CKLF-like MARVEL transmembrane domain containing 6 [H...    40   0.001
gi|93141024 chemokine-like factor isoform e [Homo sapiens]             37   0.007
gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Hom...    37   0.009
gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Hom...    36   0.016
gi|169171852 PREDICTED: similar to vacuolar protein sorting 35 [...    36   0.021
gi|17999541 vacuolar protein sorting 35 [Homo sapiens]                 36   0.021
gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo ...    35   0.046
gi|13273315 homeobox B4 [Homo sapiens]                                 34   0.079
gi|31563394 chemokine-like factor superfamily 1 isoform 2 [Homo ...    34   0.079
gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase...    32   0.23 
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]    32   0.39 
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]             31   0.51 
gi|133922582 zinc finger protein 358 [Homo sapiens]                    31   0.51 
gi|40807447 papillary renal cell carcinoma translocation-associa...    31   0.67 
gi|40807450 papillary renal cell carcinoma translocation-associa...    31   0.67 
gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]            30   0.88 
gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]            30   0.88 
gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]            30   0.88 
gi|52485606 formin-like 2 [Homo sapiens]                               30   0.88 
gi|112382214 SEC24 (S. cerevisiae) homolog B isoform b [Homo sap...    30   0.88 

>gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score =  371 bits (952), Expect = e-103
 Identities = 182/182 (100%), Positives = 182/182 (100%)

Query: 1   MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 60
           MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV
Sbjct: 1   MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 60

Query: 61  ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 120
           ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA
Sbjct: 61  ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 120

Query: 121 IAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDSD 180
           IAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDSD
Sbjct: 121 IAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDSD 180

Query: 181 SD 182
           SD
Sbjct: 181 SD 182


>gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score =  371 bits (952), Expect = e-103
 Identities = 182/182 (100%), Positives = 182/182 (100%)

Query: 1   MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 60
           MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV
Sbjct: 1   MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 60

Query: 61  ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 120
           ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA
Sbjct: 61  ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 120

Query: 121 IAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDSD 180
           IAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDSD
Sbjct: 121 IAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDSD 180

Query: 181 SD 182
           SD
Sbjct: 181 SD 182


>gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score =  371 bits (952), Expect = e-103
 Identities = 182/182 (100%), Positives = 182/182 (100%)

Query: 1   MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 60
           MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV
Sbjct: 1   MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 60

Query: 61  ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 120
           ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA
Sbjct: 61  ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 120

Query: 121 IAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDSD 180
           IAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDSD
Sbjct: 121 IAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDSD 180

Query: 181 SD 182
           SD
Sbjct: 181 SD 182


>gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score =  371 bits (952), Expect = e-103
 Identities = 182/182 (100%), Positives = 182/182 (100%)

Query: 1   MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 60
           MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV
Sbjct: 1   MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 60

Query: 61  ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 120
           ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA
Sbjct: 61  ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 120

Query: 121 IAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDSD 180
           IAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDSD
Sbjct: 121 IAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDSD 180

Query: 181 SD 182
           SD
Sbjct: 181 SD 182


>gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo
           sapiens]
          Length = 156

 Score = 98.2 bits (243), Expect = 3e-21
 Identities = 59/140 (42%), Positives = 81/140 (57%), Gaps = 3/140 (2%)

Query: 24  VPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYVASSASAFLTAPLLEFLLALYFLF 83
           V  L+     +AFL S KG LL  E  L+ I FIC+ AS  SA++ A LLEF + L FLF
Sbjct: 17  VAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTAS-ISAYMAAALLEFFITLAFLF 75

Query: 84  ADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITAIAKYSDGASKAAGVFGFFATIVF 143
             A Q   ++  + WP +DFLRCV+A +I+  +S  A+    DGA+ AA VFG     +F
Sbjct: 76  LYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAAVTS-RDGAAIAAFVFGIILVSIF 134

Query: 144 ATDFYLIF-NDVAKFLKQGD 162
           A D + I+  ++A    QGD
Sbjct: 135 AYDAFKIYRTEMAPGASQGD 154


>gi|4505893 proteolipid protein 2 (colonic epithelium-enriched)
           [Homo sapiens]
          Length = 152

 Score = 64.7 bits (156), Expect = 4e-11
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 1/111 (0%)

Query: 41  KGRLLLAESGLSFITFICYVASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPM 100
           KG LL AE  L  +  IC+ AS+   + +  ++E +LA  F       L+ K   + WP 
Sbjct: 24  KGILLFAEIILCLVILICFSASTPG-YSSLSVIEMILAAIFFVVYMCDLHTKIPFINWPW 82

Query: 101 MDFLRCVTAALIYFAISITAIAKYSDGASKAAGVFGFFATIVFATDFYLIF 151
            DF R + AA++Y   SI  + +  + +   AGV G  AT +F  D Y+ F
Sbjct: 83  SDFFRTLIAAILYLITSIVVLVERGNHSKIVAGVLGLIATCLFGYDAYVTF 133


>gi|82546841 chemokine-like factor superfamily 5 isoform c [Homo
           sapiens]
          Length = 125

 Score = 58.5 bits (140), Expect = 3e-09
 Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 24  VPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYVASSASAFLTAPLLEFLLALYFLF 83
           V  L+     +AFL S KG LL  E  L+ I FIC+ AS  SA++ A LLEF + L FLF
Sbjct: 17  VAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTAS-ISAYMAAALLEFFITLAFLF 75

Query: 84  ADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISI 118
             A Q   ++  + WP + F   + +   Y A  I
Sbjct: 76  LYATQYYQRFDRINWPCLVFGIILVSIFAYDAFKI 110


>gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo
           sapiens]
          Length = 208

 Score = 47.8 bits (112), Expect = 5e-06
 Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 15/178 (8%)

Query: 10  PDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYVASSASA--- 66
           P  EP    R      GL  L     +L    GRL +A+  L+ I FIC     A +   
Sbjct: 29  PTTEPVSQRR------GLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPCE 82

Query: 67  ----FLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISIT-AI 121
               F       F++    L   ++ L+ +   + W + D +    +A ++F  SI  A 
Sbjct: 83  GLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAA 142

Query: 122 AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDS 179
             +  GA  AA +FGF AT  +A + +L        ++Q  + D   A +TE  + DS
Sbjct: 143 LNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVRQQSTNDYIRA-RTESRDVDS 199


>gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo
           sapiens]
          Length = 234

 Score = 47.8 bits (112), Expect = 5e-06
 Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 15/178 (8%)

Query: 10  PDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYVASSASA--- 66
           P  EP    R      GL  L     +L    GRL +A+  L+ I FIC     A +   
Sbjct: 29  PTTEPVSQRR------GLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPCE 82

Query: 67  ----FLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISIT-AI 121
               F       F++    L   ++ L+ +   + W + D +    +A ++F  SI  A 
Sbjct: 83  GLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAA 142

Query: 122 AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDS 179
             +  GA  AA +FGF AT  +A + +L        ++Q  + D   A +TE  + DS
Sbjct: 143 LNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVRQQSTNDYIRA-RTESRDVDS 199


>gi|8393581 chemokine-like factor isoform a [Homo sapiens]
          Length = 152

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 23/119 (19%), Positives = 52/119 (43%), Gaps = 1/119 (0%)

Query: 34  RAFLCSLKGRLLLAESGLSFITFICYVASSA-SAFLTAPLLEFLLALYFLFADAMQLNDK 92
           R F  S+KG + +    L+  +   ++ + A   ++     E  + L+F+    ++L+  
Sbjct: 11  RPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL 70

Query: 93  WQGLCWPMMDFLRCVTAALIYFAISITAIAKYSDGASKAAGVFGFFATIVFATDFYLIF 151
            + L WP++D +  +   +    +S+ A+   +   +   GVF     +    D  LI+
Sbjct: 71  MKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGVFALVTAVCCLADGALIY 129


>gi|8923370 CKLF-like MARVEL transmembrane domain containing 6 [Homo
           sapiens]
          Length = 183

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 43/157 (27%), Positives = 59/157 (37%), Gaps = 28/157 (17%)

Query: 6   PDPDPDPEPAGGSRPGPA--------------VPGLRALLPARAFLCSLKGRLLLAESGL 51
           P  + DP PA G R G A              + GL+ LL   AF+C           GL
Sbjct: 9   PTTEEDPGPARGPRSGLAAYFFMGRLPLLRRVLKGLQLLLSLLAFICEEVVSQCTLCGGL 68

Query: 52  SFITFICYVASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAAL 111
            F  F+     S SAFL        L+L  L        ++         DF   +    
Sbjct: 69  YFFEFV-----SCSAFL--------LSLLILIVYCTPFYERVDTTKVKSSDFYITLGTGC 115

Query: 112 IYFAISITAIAKYS-DGASKAAGVFGFFATIVFATDF 147
           ++   SI  ++ +    A  AA VFGF A+ +F  DF
Sbjct: 116 VFLLASIIFVSTHDRTSAEIAAIVFGFIASFMFLLDF 152


>gi|93141024 chemokine-like factor isoform e [Homo sapiens]
          Length = 113

 Score = 37.4 bits (85), Expect = 0.007
 Identities = 19/103 (18%), Positives = 47/103 (45%), Gaps = 1/103 (0%)

Query: 34  RAFLCSLKGRLLLAESGLSFITFICYVASSA-SAFLTAPLLEFLLALYFLFADAMQLNDK 92
           R F  S+KG + +    L+  +   ++ + A   ++     E  + L+F+    ++L+  
Sbjct: 11  RPFCFSVKGHVKMLRLALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRL 70

Query: 93  WQGLCWPMMDFLRCVTAALIYFAISITAIAKYSDGASKAAGVF 135
            + L WP++D +  +   +    +S+ A+   +   +   G+F
Sbjct: 71  MKWLFWPLLDIINSLVTTVFMLIVSVLALIPETTTLTVGGGLF 113


>gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Homo
           sapiens]
          Length = 286

 Score = 37.0 bits (84), Expect = 0.009
 Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 2/129 (1%)

Query: 34  RAFLCSLKGRLLLAESGLSFITFICYVASSAS-AFLTAPLLEFLLALYFLFADAMQLNDK 92
           + F  S  G L +    L      C++ + A+ +F+T   LE  + ++F+    + L+  
Sbjct: 129 KRFSFSPTGMLKILRLSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHL 188

Query: 93  WQGLCWPMMDFLRCVTAALIYFAISITAI-AKYSDGASKAAGVFGFFATIVFATDFYLIF 151
              L WP++D    +  A+    ++I A+  K         G     A IV   D +++ 
Sbjct: 189 LTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCIDAFVVT 248

Query: 152 NDVAKFLKQ 160
             +   LK+
Sbjct: 249 TKMRTNLKR 257


>gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Homo
           sapiens]
          Length = 231

 Score = 36.2 bits (82), Expect = 0.016
 Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 34  RAFLCSLKGRLLLAESGLSFITFICYVASSAS-AFLTAPLLEFLLALYFLFADAMQLNDK 92
           + F  S  G L +    L      C++ + A+ +F+T   LE  + ++F+    + L+  
Sbjct: 129 KRFSFSPTGMLKILRLSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHL 188

Query: 93  WQGLCWPMMDFLRCVTAALIYFAISITAI 121
              L WP++D    +  A+    ++I A+
Sbjct: 189 LTYLHWPLLDLTNSIITAVFLSVVAILAM 217


>gi|169171852 PREDICTED: similar to vacuolar protein sorting 35
           [Homo sapiens]
          Length = 363

 Score = 35.8 bits (81), Expect = 0.021
 Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 14/137 (10%)

Query: 3   PPDPDPDPDPEPAGGSRP--GPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 60
           P  P  DPDPE     +   G  +  LR+  P + +L     R      G   I F    
Sbjct: 39  PDQPVEDPDPEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTL-- 96

Query: 61  ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 120
                     PL+     L F + +  +++DKW+  C  +  F     +ALI   ++   
Sbjct: 97  ---------PPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELP 147

Query: 121 IAKYSDGASKAAGVFGF 137
           +  +  GA  AAG  GF
Sbjct: 148 LRLFLQGA-LAAGEIGF 163


>gi|17999541 vacuolar protein sorting 35 [Homo sapiens]
          Length = 796

 Score = 35.8 bits (81), Expect = 0.021
 Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 14/137 (10%)

Query: 3   PPDPDPDPDPEPAGGSRP--GPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 60
           P  P  DPDPE     +   G  +  LR+  P + +L     R      G   I F    
Sbjct: 472 PDQPVEDPDPEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTL-- 529

Query: 61  ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 120
                     PL+     L F + +  +++DKW+  C  +  F     +ALI   ++   
Sbjct: 530 ---------PPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELP 580

Query: 121 IAKYSDGASKAAGVFGF 137
           +  +  GA  AAG  GF
Sbjct: 581 LRLFLQGA-LAAGEIGF 596


>gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo
           sapiens]
          Length = 169

 Score = 34.7 bits (78), Expect = 0.046
 Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 2/105 (1%)

Query: 58  CYVASSAS-AFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAI 116
           C++ + A+ +F+T   LE  + ++F+    + L+     L WP++D    +  A+    +
Sbjct: 36  CFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVV 95

Query: 117 SITAI-AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQ 160
           +I A+  K         G     A IV   D +++   +   LK+
Sbjct: 96  AILAMQEKKRRHLLYVGGSLCLTAVIVCCIDAFVVTTKMRTNLKR 140


>gi|13273315 homeobox B4 [Homo sapiens]
          Length = 251

 Score = 33.9 bits (76), Expect = 0.079
 Identities = 17/36 (47%), Positives = 17/36 (47%)

Query: 3   PPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLC 38
           PP P P P P P G S   PA P   ALLP     C
Sbjct: 75  PPPPPPPPPPPPPGLSPRAPAPPPAGALLPEPGQRC 110


>gi|31563394 chemokine-like factor superfamily 1 isoform 2 [Homo
           sapiens]
          Length = 114

 Score = 33.9 bits (76), Expect = 0.079
 Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 58  CYVASSAS-AFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAI 116
           C++ + A+ +F+T   LE  + ++F+    + L+     L WP++D    +  A+    +
Sbjct: 36  CFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVV 95

Query: 117 SITAI 121
           +I A+
Sbjct: 96  AILAM 100


>gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase
          4 [Homo sapiens]
          Length = 456

 Score = 32.3 bits (72), Expect = 0.23
 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 17/74 (22%)

Query: 2  WPPDPDPDPDPEP-AGGSRPGPAVPGLRALLPAR--AFLCSLKGRLLLAESGLSFITFIC 58
          WP  P P P P P A    PG +  G     PAR   F+C+L          LS +T++C
Sbjct: 4  WPAPPPPPPPPPPLAAPPPPGASAKG----PPARKLLFMCTL---------SLS-VTYLC 49

Query: 59 YVASSASAFLTAPL 72
          Y     S  L  PL
Sbjct: 50 YSLLGGSGSLQFPL 63


>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
          Length = 663

 Score = 31.6 bits (70), Expect = 0.39
 Identities = 11/18 (61%), Positives = 13/18 (72%)

Query: 3   PPDPDPDPDPEPAGGSRP 20
           PP P P P P PAGG++P
Sbjct: 413 PPPPPPPPPPPPAGGAKP 430


>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
          Length = 502

 Score = 31.2 bits (69), Expect = 0.51
 Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 3   PPDPDPDPDPEPAGGSRPGPAVPGL-RALLPA 33
           PP P P P P P   S  GPA P L  AL+PA
Sbjct: 391 PPMPPPPPPPPPPPSSGNGPAPPPLPPALVPA 422


>gi|133922582 zinc finger protein 358 [Homo sapiens]
          Length = 568

 Score = 31.2 bits (69), Expect = 0.51
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 4   PDPDPDPDPEPAGGSRPGPAVPGLRALLPA 33
           PDPDP P P+P   S P P  P    + PA
Sbjct: 518 PDPDPVPSPDPNPVSCPDPCSPTRGTVSPA 547


>gi|40807447 papillary renal cell carcinoma
          translocation-associated gene product isoform 1 [Homo
          sapiens]
          Length = 491

 Score = 30.8 bits (68), Expect = 0.67
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 3  PPDPDPDPDPEPAGGSRPGPAVPGLRALLPA 33
          P + +P+P+ E A     GPA+ GL A LPA
Sbjct: 14 PDEAEPEPEEEEAVAPTSGPALGGLFASLPA 44


>gi|40807450 papillary renal cell carcinoma
          translocation-associated gene product isoform 2 [Homo
          sapiens]
          Length = 459

 Score = 30.8 bits (68), Expect = 0.67
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 3  PPDPDPDPDPEPAGGSRPGPAVPGLRALLPA 33
          P + +P+P+ E A     GPA+ GL A LPA
Sbjct: 14 PDEAEPEPEEEEAVAPTSGPALGGLFASLPA 44


>gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 30.4 bits (67), Expect = 0.88
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 6/41 (14%)

Query: 4   PDPDPDPDPEPAGGSR------PGPAVPGLRALLPARAFLC 38
           P P P P P PA G R        PA+PG   +L   + +C
Sbjct: 140 PSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVC 180


>gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 30.4 bits (67), Expect = 0.88
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 6/41 (14%)

Query: 4   PDPDPDPDPEPAGGSR------PGPAVPGLRALLPARAFLC 38
           P P P P P PA G R        PA+PG   +L   + +C
Sbjct: 140 PSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVC 180


>gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 30.4 bits (67), Expect = 0.88
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 6/41 (14%)

Query: 4   PDPDPDPDPEPAGGSR------PGPAVPGLRALLPARAFLC 38
           P P P P P PA G R        PA+PG   +L   + +C
Sbjct: 140 PSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVC 180


>gi|52485606 formin-like 2 [Homo sapiens]
          Length = 1092

 Score = 30.4 bits (67), Expect = 0.88
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 3   PPDPDPDPDPEPAGGSRPGPA-----VPGLRALLPARAFLCSLKGRLLLAESGLSFI 54
           PP P P P P P     PGPA      P L   LP+   L       ++  SGL+ +
Sbjct: 558 PPPPPPPPPPPPPPPPLPGPAAETVPAPPLAPPLPSAPPLPGTSSPTVVFNSGLAAV 614



 Score = 28.1 bits (61), Expect = 4.4
 Identities = 11/24 (45%), Positives = 12/24 (50%)

Query: 3   PPDPDPDPDPEPAGGSRPGPAVPG 26
           PP P P P P P     P P +PG
Sbjct: 553 PPPPPPPPPPPPPPPPPPPPPLPG 576


>gi|112382214 SEC24 (S. cerevisiae) homolog B isoform b [Homo
           sapiens]
          Length = 1233

 Score = 30.4 bits (67), Expect = 0.88
 Identities = 12/22 (54%), Positives = 13/22 (59%)

Query: 4   PDPDPDPDPEPAGGSRPGPAVP 25
           P P+PDP   PA  S P P VP
Sbjct: 394 PAPEPDPASAPAPASAPAPVVP 415


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,603,560
Number of Sequences: 37866
Number of extensions: 372821
Number of successful extensions: 4576
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 3955
Number of HSP's gapped (non-prelim): 529
length of query: 182
length of database: 18,247,518
effective HSP length: 96
effective length of query: 86
effective length of database: 14,612,382
effective search space: 1256664852
effective search space used: 1256664852
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.