BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|22027509 cell division cycle associated 4 [Homo sapiens] (241 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|22027509 cell division cycle associated 4 [Homo sapiens] 493 e-140 gi|22027511 cell division cycle associated 4 [Homo sapiens] 493 e-140 gi|7661926 SERTA domain containing 2 [Homo sapiens] 62 6e-10 gi|153792060 SERTA domain containing 1 [Homo sapiens] 53 3e-07 gi|42741652 RPA-binding trans-activator [Homo sapiens] 33 0.22 gi|15718684 RPA-binding trans-activator [Homo sapiens] 33 0.22 gi|40254931 hypothetical protein LOC55732 [Homo sapiens] 33 0.29 gi|10092667 SERTA domain containing 4 [Homo sapiens] 32 0.38 gi|239755452 PREDICTED: hypothetical protein [Homo sapiens] 31 0.84 gi|239749933 PREDICTED: hypothetical protein XP_002347217 [Homo ... 31 0.84 gi|239744256 PREDICTED: hypothetical protein XP_002343085 [Homo ... 31 0.84 gi|91208428 protein tyrosine phosphatase, receptor-type, zeta1 p... 31 0.84 gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 31 1.1 gi|193788649 retinoic acid induced 2 [Homo sapiens] 31 1.1 gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens] 30 2.5 gi|154354992 B-box and SPRY domain containing [Homo sapiens] 28 7.1 gi|54873613 agrin [Homo sapiens] 28 9.3 gi|4557743 Mediterranean fever protein [Homo sapiens] 28 9.3 gi|58761492 Rho guanine nucleotide exchange factor (GEF) 10-like... 28 9.3 gi|74136547 Rho guanine nucleotide exchange factor (GEF) 10-like... 28 9.3 gi|153945771 endothelin converting enzyme 2 isoform D [Homo sapi... 28 9.3 gi|10863935 reticulon 1 isoform A [Homo sapiens] 28 9.3 gi|23397708 copine I isoform a [Homo sapiens] 28 9.3 gi|23397706 copine I isoform a [Homo sapiens] 28 9.3 gi|23397704 copine I isoform a [Homo sapiens] 28 9.3 gi|23397702 copine I isoform a [Homo sapiens] 28 9.3 gi|23397700 copine I isoform a [Homo sapiens] 28 9.3 gi|23397698 copine I isoform a [Homo sapiens] 28 9.3 gi|23397696 copine I isoform a [Homo sapiens] 28 9.3 gi|197333761 copine I isoform b [Homo sapiens] 28 9.3 >gi|22027509 cell division cycle associated 4 [Homo sapiens] Length = 241 Score = 493 bits (1270), Expect = e-140 Identities = 241/241 (100%), Positives = 241/241 (100%) Query: 1 MFARGLKRKCVGHEEDVEGALAGLKTVSSYSLQRQSLLDMSLVKLQLCHMLVEPNLCRSV 60 MFARGLKRKCVGHEEDVEGALAGLKTVSSYSLQRQSLLDMSLVKLQLCHMLVEPNLCRSV Sbjct: 1 MFARGLKRKCVGHEEDVEGALAGLKTVSSYSLQRQSLLDMSLVKLQLCHMLVEPNLCRSV 60 Query: 61 LIANTVRQIQEEMTQDGTWRTVAPQAAERAPLDRLVSTEILCRAAWGQEGAHPAPGLGDG 120 LIANTVRQIQEEMTQDGTWRTVAPQAAERAPLDRLVSTEILCRAAWGQEGAHPAPGLGDG Sbjct: 61 LIANTVRQIQEEMTQDGTWRTVAPQAAERAPLDRLVSTEILCRAAWGQEGAHPAPGLGDG 120 Query: 121 HTQGPVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQIFETLETKNPSCMEEL 180 HTQGPVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQIFETLETKNPSCMEEL Sbjct: 121 HTQGPVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQIFETLETKNPSCMEEL 180 Query: 181 FSDVDSPYYDLDTVLTGMMGGARPGPCEGLEGLAPATPGPSSSCKSDLGELDHVVEILVE 240 FSDVDSPYYDLDTVLTGMMGGARPGPCEGLEGLAPATPGPSSSCKSDLGELDHVVEILVE Sbjct: 181 FSDVDSPYYDLDTVLTGMMGGARPGPCEGLEGLAPATPGPSSSCKSDLGELDHVVEILVE 240 Query: 241 T 241 T Sbjct: 241 T 241 >gi|22027511 cell division cycle associated 4 [Homo sapiens] Length = 241 Score = 493 bits (1270), Expect = e-140 Identities = 241/241 (100%), Positives = 241/241 (100%) Query: 1 MFARGLKRKCVGHEEDVEGALAGLKTVSSYSLQRQSLLDMSLVKLQLCHMLVEPNLCRSV 60 MFARGLKRKCVGHEEDVEGALAGLKTVSSYSLQRQSLLDMSLVKLQLCHMLVEPNLCRSV Sbjct: 1 MFARGLKRKCVGHEEDVEGALAGLKTVSSYSLQRQSLLDMSLVKLQLCHMLVEPNLCRSV 60 Query: 61 LIANTVRQIQEEMTQDGTWRTVAPQAAERAPLDRLVSTEILCRAAWGQEGAHPAPGLGDG 120 LIANTVRQIQEEMTQDGTWRTVAPQAAERAPLDRLVSTEILCRAAWGQEGAHPAPGLGDG Sbjct: 61 LIANTVRQIQEEMTQDGTWRTVAPQAAERAPLDRLVSTEILCRAAWGQEGAHPAPGLGDG 120 Query: 121 HTQGPVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQIFETLETKNPSCMEEL 180 HTQGPVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQIFETLETKNPSCMEEL Sbjct: 121 HTQGPVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQIFETLETKNPSCMEEL 180 Query: 181 FSDVDSPYYDLDTVLTGMMGGARPGPCEGLEGLAPATPGPSSSCKSDLGELDHVVEILVE 240 FSDVDSPYYDLDTVLTGMMGGARPGPCEGLEGLAPATPGPSSSCKSDLGELDHVVEILVE Sbjct: 181 FSDVDSPYYDLDTVLTGMMGGARPGPCEGLEGLAPATPGPSSSCKSDLGELDHVVEILVE 240 Query: 241 T 241 T Sbjct: 241 T 241 >gi|7661926 SERTA domain containing 2 [Homo sapiens] Length = 314 Score = 61.6 bits (148), Expect = 6e-10 Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 3/83 (3%) Query: 1 MFARGLKRKCVGHEEDVEGALAGL---KTVSSYSLQRQSLLDMSLVKLQLCHMLVEPNLC 57 M +G KRK HE+ +EG + + SY+LQRQ++ ++SL+KL L EP+L Sbjct: 1 MLGKGGKRKFDEHEDGLEGKIVSPCDGPSKVSYTLQRQTIFNISLMKLYNHRPLTEPSLQ 60 Query: 58 RSVLIANTVRQIQEEMTQDGTWR 80 ++VLI N +R+IQEE+ Q+G+ R Sbjct: 61 KTVLINNMLRRIQEELKQEGSLR 83 Score = 48.5 bits (114), Expect = 5e-06 Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 23/137 (16%) Query: 126 VSDLCPV-TSAQAPRHLQSSA---------WEMDGPRENRGSFHKSLDQIFETLETKNPS 175 + +LCP TS +A S ++DGP+E+R K +D + E + Sbjct: 176 IEELCPTSTSTEAATAATDSVKGTSSEAGTQKLDGPQESRADDSKLMDSLPGNFEITTST 235 Query: 176 CM-------EELFSDVDSPYYDLDTVLTGMMGGARPGPCEG---LEGLAPATPGP---SS 222 + LF+D+D+ YD D + ++ P L+ LAP + P S Sbjct: 236 GFLTDLTLDDILFADIDTSMYDFDPCTSSSGTASKMAPVSADDLLKTLAPYSSQPVTPSQ 295 Query: 223 SCKSDLGELDHVVEILV 239 K DL ELDH++E+LV Sbjct: 296 PFKMDLTELDHIMEVLV 312 >gi|153792060 SERTA domain containing 1 [Homo sapiens] Length = 236 Score = 52.8 bits (125), Expect = 3e-07 Identities = 71/258 (27%), Positives = 109/258 (42%), Gaps = 50/258 (19%) Query: 1 MFARGLKRKCVGHEEDVEGAL------AGLKTVSSY--SLQRQSLLDMSLVKLQLCHMLV 52 M ++GLKRK EE A+ G V+ ++ SL D+S++KL Sbjct: 1 MLSKGLKRKREEEEEKEPLAVDSWWLDPGHTAVAQAPPAVASSSLFDLSVLKLHHSLQQS 60 Query: 53 EPNLCRSVLIANTVRQIQEEMTQDGTWRTV-APQAAERAPLDRLVSTEILCRAAWGQEGA 111 EP+L VL+ NT+R+IQ M V +P AA + L S++ A+ Sbjct: 61 EPDLRHLVLVVNTLRRIQASMAPAAALPPVPSPPAAPSVADNLLASSDAALSASM----- 115 Query: 112 HPAPGLGD-GHTQGPVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQIFETLE 170 A L D H +G +QAP+ L P + G SL L+ Sbjct: 116 --ASLLEDLSHIEG---------LSQAPQPLADEG----PPGRSIGGAAPSLG----ALD 156 Query: 171 TKNPSC-------MEELFSDVDSPYYDLDTVLTGMMGGARPGPCEGLEGLAPATPGPSSS 223 P+ +E LF D+D+ YD + + G +PGP +G PG + Sbjct: 157 LLGPATGCLLDDGLEGLFEDIDTSMYD-NELWAPASEGLKPGPEDG--------PGKEEA 207 Query: 224 CKSDLGELDHVVEILVET 241 + D ELD+++++LV T Sbjct: 208 PELDEAELDYLMDVLVGT 225 >gi|42741652 RPA-binding trans-activator [Homo sapiens] Length = 196 Score = 33.1 bits (74), Expect = 0.22 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Query: 5 GLKRKCVGHEEDVEGALAGLKTVSSYSLQRQSLLDMSLVKLQLCHMLVEPNLCRSVLIAN 64 GLKRK EE+ E + SY +Q+LL +SL K+Q P+L R VLI N Sbjct: 4 GLKRKHSDLEEEEERWEWSPAGLQSY---QQALLRISLDKVQRSLGPRAPSLRRHVLIHN 60 Query: 65 TVRQIQ 70 T++Q+Q Sbjct: 61 TLQQLQ 66 >gi|15718684 RPA-binding trans-activator [Homo sapiens] Length = 196 Score = 33.1 bits (74), Expect = 0.22 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Query: 5 GLKRKCVGHEEDVEGALAGLKTVSSYSLQRQSLLDMSLVKLQLCHMLVEPNLCRSVLIAN 64 GLKRK EE+ E + SY +Q+LL +SL K+Q P+L R VLI N Sbjct: 4 GLKRKHSDLEEEEERWEWSPAGLQSY---QQALLRISLDKVQRSLGPRAPSLRRHVLIHN 60 Query: 65 TVRQIQ 70 T++Q+Q Sbjct: 61 TLQQLQ 66 >gi|40254931 hypothetical protein LOC55732 [Homo sapiens] Length = 853 Score = 32.7 bits (73), Expect = 0.29 Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 16/159 (10%) Query: 34 RQSLLDMSLVKLQLCHMLVEPNLCRSVLIA-NTVRQIQEEMTQDGTWRTVAPQAAERAPL 92 +QSL S++K QL H + +LC +L + ++ Q+ E+MTQ A + A Sbjct: 188 KQSLKHQSIIKSQLKHKDIITSLCEDILFSFHSCLQLAEQMTQS--------DAQDNADY 239 Query: 93 DRLVSTEILCRAAWGQEGAHPA----PGLGDGHTQGPVSDLCPVTSAQAPRHLQSSAWEM 148 T LCR + H A P L D + L ++ P L ++ Sbjct: 240 RLFQKTLKLCR-FFANSLLHYAKEFLPFLSDSCC--TLHQLYLQIHSKFPPSLYATRISK 296 Query: 149 DGPRENRGSFHKSLDQIFETLETKNPSCMEELFSDVDSP 187 E G+F +LD + L T P L S +D P Sbjct: 297 AHQEEIAGAFLVTLDPLISQLLTFQPFMQVVLDSKLDLP 335 >gi|10092667 SERTA domain containing 4 [Homo sapiens] Length = 356 Score = 32.3 bits (72), Expect = 0.38 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 5/75 (6%) Query: 7 KRKCVGHEEDVEGALAGL--KTVSSYSLQRQSLLDMSLVKLQLCHMLVEPNLCRSVLIAN 64 KRK V EED L+ KT+S + +R +L MSL KL+ E L RSVLI N Sbjct: 78 KRKYV-EEEDFHPPLSSCSHKTISIFE-ERAHILYMSLEKLKFIDD-PEVYLRRSVLINN 134 Query: 65 TVRQIQEEMTQDGTW 79 +++I E+ W Sbjct: 135 LMKRIHGEIIMQNNW 149 >gi|239755452 PREDICTED: hypothetical protein [Homo sapiens] Length = 171 Score = 31.2 bits (69), Expect = 0.84 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 7/70 (10%) Query: 82 VAPQAAERAPLDRLVSTEILCRAAWGQEGAHPAPGLGDGHTQGPVSDLCPVTSAQAPRHL 141 VAP A AP+ TE + +WG GLG G Q + Q P H+ Sbjct: 21 VAPVAFLTAPIGEAPRTEAMADVSWGL-------GLGQGTEQVVEGATQGLAQLQGPHHV 73 Query: 142 QSSAWEMDGP 151 Q++ + GP Sbjct: 74 QATFYPELGP 83 >gi|239749933 PREDICTED: hypothetical protein XP_002347217 [Homo sapiens] Length = 171 Score = 31.2 bits (69), Expect = 0.84 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 7/70 (10%) Query: 82 VAPQAAERAPLDRLVSTEILCRAAWGQEGAHPAPGLGDGHTQGPVSDLCPVTSAQAPRHL 141 VAP A AP+ TE + +WG GLG G Q + Q P H+ Sbjct: 21 VAPVAFLTAPIGEAPRTEAMADVSWGL-------GLGQGTEQVVEGATQGLAQLQGPHHV 73 Query: 142 QSSAWEMDGP 151 Q++ + GP Sbjct: 74 QATFYPELGP 83 >gi|239744256 PREDICTED: hypothetical protein XP_002343085 [Homo sapiens] Length = 171 Score = 31.2 bits (69), Expect = 0.84 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 7/70 (10%) Query: 82 VAPQAAERAPLDRLVSTEILCRAAWGQEGAHPAPGLGDGHTQGPVSDLCPVTSAQAPRHL 141 VAP A AP+ TE + +WG GLG G Q + Q P H+ Sbjct: 21 VAPVAFLTAPIGEAPRTEAMADVSWGL-------GLGQGTEQVVEGATQGLAQLQGPHHV 73 Query: 142 QSSAWEMDGP 151 Q++ + GP Sbjct: 74 QATFYPELGP 83 >gi|91208428 protein tyrosine phosphatase, receptor-type, zeta1 precursor [Homo sapiens] Length = 2315 Score = 31.2 bits (69), Expect = 0.84 Identities = 35/124 (28%), Positives = 46/124 (37%), Gaps = 19/124 (15%) Query: 114 APGLGDGHTQGPVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQIFETLETKN 173 A GL H G + SA P +S AW + E GS + D + E ET Sbjct: 1508 ANGLSQKHNDGKEENDIQTGSALLPLSPESKAWAVLTSDEESGSGQGTSDSLNEN-ETST 1566 Query: 174 PSCMEELFSDVDSPYYDLDTVLTGMMGGARPGPCEGLEGLAPATP-GPSSSCKSDLGELD 232 FS D+ D D +L G + P P P+SS S+ E+ Sbjct: 1567 D------FSFADTNEKDADGILAA-----------GDSEITPGFPQSPTSSVTSENSEVF 1609 Query: 233 HVVE 236 HV E Sbjct: 1610 HVSE 1613 >gi|239757861 PREDICTED: similar to armadillo repeat containing, X-linked 4 [Homo sapiens] Length = 2382 Score = 30.8 bits (68), Expect = 1.1 Identities = 16/39 (41%), Positives = 23/39 (58%) Query: 198 MMGGARPGPCEGLEGLAPATPGPSSSCKSDLGELDHVVE 236 ++GGARPGP + G + A G SS +S +G D V+ Sbjct: 1710 VLGGARPGPADQSSGGSWAGTGNQSSGRSWIGPGDQAVD 1748 >gi|193788649 retinoic acid induced 2 [Homo sapiens] Length = 530 Score = 30.8 bits (68), Expect = 1.1 Identities = 32/110 (29%), Positives = 41/110 (37%), Gaps = 4/110 (3%) Query: 122 TQGPVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQIFETLETKNPSCMEELF 181 TQGPV L V +HL S + + H +L Q E E + + Sbjct: 116 TQGPVQ-LPVVLEQHVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIP 174 Query: 182 SDVDSPYYDLDTVLTGMM---GGARPGPCEGLEGLAPATPGPSSSCKSDL 228 S P + VL + G P PC+ G AP P P SS S L Sbjct: 175 SQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPL 224 >gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens] Length = 1989 Score = 29.6 bits (65), Expect = 2.5 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 2/87 (2%) Query: 110 GAHPAPGLGDGHTQGPVSDLCPVTSAQAPRHLQSSAW-EMDGPRENRGSFHKSLDQIFET 168 G+ + G G G G P+ S +W E PR++ SF +S + + Sbjct: 154 GSRWSRGRGVGERGGKPGCRPPLGGGAGSGFSSSQSWREPSPPRKSSKSFGRSPSRK-QN 212 Query: 169 LETKNPSCMEELFSDVDSPYYDLDTVL 195 +KN +C+EE F D+ Y + L Sbjct: 213 YSSKNENCVEETFEDLLLKYKQIQLEL 239 >gi|154354992 B-box and SPRY domain containing [Homo sapiens] Length = 402 Score = 28.1 bits (61), Expect = 7.1 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 10/38 (26%) Query: 109 EGAHPAPGLGDGHTQGPVSDLCPVTSAQAPRHLQSSAW 146 EGA P PG G G GP LC P H Q+ +W Sbjct: 4 EGAEPGPGSGSGPGPGP---LC-------PEHGQALSW 31 >gi|54873613 agrin [Homo sapiens] Length = 2045 Score = 27.7 bits (60), Expect = 9.3 Identities = 33/124 (26%), Positives = 46/124 (37%), Gaps = 20/124 (16%) Query: 100 ILCRAAWGQEGAHPAPGLGDGHTQG-PVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSF 158 +L +A GA P H+Q P P T+A PR ++ W + Sbjct: 992 LLSQALPAPPGALPLAPSSTAHSQTTPPPSSRPRTTASVPR---TTVWPVL--------- 1039 Query: 159 HKSLDQIFETLETKNPSCMEELFSDVDSPYYDLDTVLTGMM--GGARPGPCEGLEGLAPA 216 + T + PS + F + S D L+G G G E LEG + A Sbjct: 1040 -----TVPPTAPSPAPSLVASAFGESGSTDGSSDEELSGDQEASGGGSGGLEPLEGSSVA 1094 Query: 217 TPGP 220 TPGP Sbjct: 1095 TPGP 1098 >gi|4557743 Mediterranean fever protein [Homo sapiens] Length = 781 Score = 27.7 bits (60), Expect = 9.3 Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 8/127 (6%) Query: 89 RAPLDRLVSTEILCRAAWGQEGAHPAPGLGDGHTQGPVSDLCPVTSAQAPRHLQSSAWEM 148 RA RL++ E L RAA QE + G D + + P S + P H + + E Sbjct: 75 RAINQRLLAEE-LHRAAI-QEYSTQENGTDDSAASSSLGENKP-RSLKTPDHPEGN--EG 129 Query: 149 DGPRENRG---SFHKSLDQIFETLETKNPSCMEELFSDVDSPYYDLDTVLTGMMGGARPG 205 +GPR G S S + L K S E S+ T + GG PG Sbjct: 130 NGPRPYGGGAASLRCSQPEAGRGLSRKPLSKRREKASEGLDAQGKPRTRSPALPGGRSPG 189 Query: 206 PCEGLEG 212 PC LEG Sbjct: 190 PCRALEG 196 >gi|58761492 Rho guanine nucleotide exchange factor (GEF) 10-like isoform 1 [Homo sapiens] Length = 1279 Score = 27.7 bits (60), Expect = 9.3 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 119 DGHTQGPVSDLCPVTSAQAPRHLQSSAWEMDGPR 152 +GH GPV+ L TS AP L+S E +GPR Sbjct: 1110 NGHC-GPVAFLAVATSILAPDILRSDQEEAEGPR 1142 >gi|74136547 Rho guanine nucleotide exchange factor (GEF) 10-like isoform 2 [Homo sapiens] Length = 1240 Score = 27.7 bits (60), Expect = 9.3 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 119 DGHTQGPVSDLCPVTSAQAPRHLQSSAWEMDGPR 152 +GH GPV+ L TS AP L+S E +GPR Sbjct: 1071 NGHC-GPVAFLAVATSILAPDILRSDQEEAEGPR 1103 >gi|153945771 endothelin converting enzyme 2 isoform D [Homo sapiens] Length = 811 Score = 27.7 bits (60), Expect = 9.3 Identities = 14/32 (43%), Positives = 18/32 (56%) Query: 190 DLDTVLTGMMGGARPGPCEGLEGLAPATPGPS 221 D D T + GGA P E +G +P +PGPS Sbjct: 24 DEDAPETPVEGGASPDAMEVGKGASPFSPGPS 55 >gi|10863935 reticulon 1 isoform A [Homo sapiens] Length = 776 Score = 27.7 bits (60), Expect = 9.3 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 8/114 (7%) Query: 109 EGAHPAPGLGDGHTQGPVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQIFET 168 + P+PGLG + + + Q+P +++++ + G ++D F T Sbjct: 43 QAGEPSPGLGARAREAASREAGSGPARQSPVAMETASTGVAG-------VSSAMDHTFST 95 Query: 169 LETKNP-SCMEELFSDVDSPYYDLDTVLTGMMGGARPGPCEGLEGLAPATPGPS 221 SC L SD+ P + T TG++ TPGPS Sbjct: 96 TSKDGEGSCYTSLISDICYPPQEDSTYFTGILQKENGHVTISESPEELGTPGPS 149 >gi|23397708 copine I isoform a [Homo sapiens] Length = 537 Score = 27.7 bits (60), Expect = 9.3 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 16/88 (18%) Query: 125 PVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQI------FETLET------- 171 PV C + P +Q S ++ DG + G+FH SL Q+ FE + Sbjct: 195 PVQHFCG-GNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKK 253 Query: 172 --KNPSCMEELFSDVDSPYYDLDTVLTG 197 KN + V++ Y LD V+ G Sbjct: 254 SYKNSGTIRVKICRVETEYSFLDYVMGG 281 >gi|23397706 copine I isoform a [Homo sapiens] Length = 537 Score = 27.7 bits (60), Expect = 9.3 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 16/88 (18%) Query: 125 PVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQI------FETLET------- 171 PV C + P +Q S ++ DG + G+FH SL Q+ FE + Sbjct: 195 PVQHFCG-GNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKK 253 Query: 172 --KNPSCMEELFSDVDSPYYDLDTVLTG 197 KN + V++ Y LD V+ G Sbjct: 254 SYKNSGTIRVKICRVETEYSFLDYVMGG 281 >gi|23397704 copine I isoform a [Homo sapiens] Length = 537 Score = 27.7 bits (60), Expect = 9.3 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 16/88 (18%) Query: 125 PVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQI------FETLET------- 171 PV C + P +Q S ++ DG + G+FH SL Q+ FE + Sbjct: 195 PVQHFCG-GNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKK 253 Query: 172 --KNPSCMEELFSDVDSPYYDLDTVLTG 197 KN + V++ Y LD V+ G Sbjct: 254 SYKNSGTIRVKICRVETEYSFLDYVMGG 281 >gi|23397702 copine I isoform a [Homo sapiens] Length = 537 Score = 27.7 bits (60), Expect = 9.3 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 16/88 (18%) Query: 125 PVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQI------FETLET------- 171 PV C + P +Q S ++ DG + G+FH SL Q+ FE + Sbjct: 195 PVQHFCG-GNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKK 253 Query: 172 --KNPSCMEELFSDVDSPYYDLDTVLTG 197 KN + V++ Y LD V+ G Sbjct: 254 SYKNSGTIRVKICRVETEYSFLDYVMGG 281 >gi|23397700 copine I isoform a [Homo sapiens] Length = 537 Score = 27.7 bits (60), Expect = 9.3 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 16/88 (18%) Query: 125 PVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQI------FETLET------- 171 PV C + P +Q S ++ DG + G+FH SL Q+ FE + Sbjct: 195 PVQHFCG-GNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKK 253 Query: 172 --KNPSCMEELFSDVDSPYYDLDTVLTG 197 KN + V++ Y LD V+ G Sbjct: 254 SYKNSGTIRVKICRVETEYSFLDYVMGG 281 >gi|23397698 copine I isoform a [Homo sapiens] Length = 537 Score = 27.7 bits (60), Expect = 9.3 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 16/88 (18%) Query: 125 PVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQI------FETLET------- 171 PV C + P +Q S ++ DG + G+FH SL Q+ FE + Sbjct: 195 PVQHFCG-GNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKK 253 Query: 172 --KNPSCMEELFSDVDSPYYDLDTVLTG 197 KN + V++ Y LD V+ G Sbjct: 254 SYKNSGTIRVKICRVETEYSFLDYVMGG 281 >gi|23397696 copine I isoform a [Homo sapiens] Length = 537 Score = 27.7 bits (60), Expect = 9.3 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 16/88 (18%) Query: 125 PVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQI------FETLET------- 171 PV C + P +Q S ++ DG + G+FH SL Q+ FE + Sbjct: 195 PVQHFCG-GNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKK 253 Query: 172 --KNPSCMEELFSDVDSPYYDLDTVLTG 197 KN + V++ Y LD V+ G Sbjct: 254 SYKNSGTIRVKICRVETEYSFLDYVMGG 281 >gi|197333761 copine I isoform b [Homo sapiens] Length = 542 Score = 27.7 bits (60), Expect = 9.3 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 16/88 (18%) Query: 125 PVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQI------FETLET------- 171 PV C + P +Q S ++ DG + G+FH SL Q+ FE + Sbjct: 200 PVQHFCG-GNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKK 258 Query: 172 --KNPSCMEELFSDVDSPYYDLDTVLTG 197 KN + V++ Y LD V+ G Sbjct: 259 SYKNSGTIRVKICRVETEYSFLDYVMGG 286 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.132 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,520,679 Number of Sequences: 37866 Number of extensions: 500690 Number of successful extensions: 1760 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 1738 Number of HSP's gapped (non-prelim): 43 length of query: 241 length of database: 18,247,518 effective HSP length: 99 effective length of query: 142 effective length of database: 14,498,784 effective search space: 2058827328 effective search space used: 2058827328 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.