Search of human proteins with 219881538

Search of human proteins with 219881538

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|219881538 hypothetical protein LOC199870 isoform 2 [Homo
sapiens]
         (312 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|219881538 hypothetical protein LOC199870 isoform 2 [Homo sapi...   644   0.0  
gi|219881536 hypothetical protein LOC199870 isoform 1 [Homo sapi...   629   e-180
gi|219881540 hypothetical protein LOC199870 isoform 4 [Homo sapi...   556   e-159
gi|22749341 hypothetical protein LOC199870 isoform 3 [Homo sapiens]   541   e-154
gi|221139693 hypothetical protein LOC199870 isoform 5 [Homo sapi...   417   e-117
gi|134288896 hypothetical protein LOC143684 [Homo sapiens]            389   e-108
gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens]        66   3e-11
gi|6005810 mitogen-activated protein kinase kinase kinase kinase...    63   3e-10
gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens]     60   3e-09
gi|148839316 NIMA-related kinase 4 [Homo sapiens]                      57   2e-08
gi|170932471 hypothetical protein LOC79703 [Homo sapiens]              57   3e-08
gi|40807368 potassium channel regulator isoform 2 [Homo sapiens]       56   4e-08
gi|58294160 breast carcinoma amplified sequence 4 isoform a [Hom...    56   5e-08
gi|222446642 solute carrier family 36, member 3 isoform 1 [Homo ...    55   1e-07
gi|24497440 interleukin 12 receptor, beta 1 isoform 2 precursor ...    54   2e-07
gi|61969666 arginine-fifty homeobox [Homo sapiens]                     53   3e-07
gi|28372523 intraflagellar transport protein IFT20 [Homo sapiens]      52   5e-07
gi|118442834 RPGRIP1-like isoform a [Homo sapiens]                     51   2e-06
gi|94680985 cyclin J-like [Homo sapiens]                               50   3e-06
gi|239755619 PREDICTED: hypothetical protein [Homo sapiens]            50   3e-06
gi|239750132 PREDICTED: hypothetical protein XP_002347267 [Homo ...    50   3e-06
gi|239744440 PREDICTED: hypothetical protein XP_002343124 [Homo ...    50   3e-06
gi|51243063 MAD2L1 binding protein isoform 1 [Homo sapiens]            46   5e-05
gi|231571356 nitric oxide synthase 3 isoform 4 [Homo sapiens]          45   6e-05
gi|148236061 hypothetical protein LOC285501 [Homo sapiens]             45   6e-05
gi|226342962 synaptotagmin XIV isoform 2 [Homo sapiens]                44   1e-04
gi|226342955 synaptotagmin XIV isoform 1 [Homo sapiens]                44   1e-04
gi|237858664 hypothetical protein LOC123207 isoform b [Homo sapi...    44   1e-04
gi|58331120 hypothetical protein LOC29058 isoform 1 [Homo sapiens]     44   2e-04
gi|34147532 myosin, light chain 10, regulatory [Homo sapiens]          44   2e-04

>gi|219881538 hypothetical protein LOC199870 isoform 2 [Homo
           sapiens]
          Length = 312

 Score =  644 bits (1662), Expect = 0.0
 Identities = 312/312 (100%), Positives = 312/312 (100%)

Query: 1   MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQERLECNGTISAHC 60
           MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQERLECNGTISAHC
Sbjct: 1   MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQERLECNGTISAHC 60

Query: 61  NLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQ 120
           NLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQ
Sbjct: 61  NLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQ 120

Query: 121 RCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHL 180
           RCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHL
Sbjct: 121 RCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHL 180

Query: 181 SSSSRAGHQEKEQYSRLSGGGHYNSFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQK 240
           SSSSRAGHQEKEQYSRLSGGGHYNSFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQK
Sbjct: 181 SSSSRAGHQEKEQYSRLSGGGHYNSFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQK 240

Query: 241 DQMILEKEKKITELKADFQYQESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKS 300
           DQMILEKEKKITELKADFQYQESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKS
Sbjct: 241 DQMILEKEKKITELKADFQYQESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKS 300

Query: 301 KKSEKSGAITSP 312
           KKSEKSGAITSP
Sbjct: 301 KKSEKSGAITSP 312


>gi|219881536 hypothetical protein LOC199870 isoform 1 [Homo
           sapiens]
          Length = 341

 Score =  629 bits (1622), Expect = e-180
 Identities = 312/341 (91%), Positives = 312/341 (91%), Gaps = 29/341 (8%)

Query: 1   MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQERLECNGTISAHC 60
           MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQERLECNGTISAHC
Sbjct: 1   MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQERLECNGTISAHC 60

Query: 61  NLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQ 120
           NLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQ
Sbjct: 61  NLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQ 120

Query: 121 RCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHL 180
           RCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHL
Sbjct: 121 RCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHL 180

Query: 181 SSSSRAGHQEKEQYSRLSGGGHYNS-----------------------------FSPDLA 211
           SSSSRAGHQEKEQYSRLSGGGHYNS                             FSPDLA
Sbjct: 181 SSSSRAGHQEKEQYSRLSGGGHYNSQKTLSTSSIQNEIPKKKSKFESITTNGDSFSPDLA 240

Query: 212 LDSPGTDHFVIIAQLKEEVATLKKMLHQKDQMILEKEKKITELKADFQYQESQMRAKMNQ 271
           LDSPGTDHFVIIAQLKEEVATLKKMLHQKDQMILEKEKKITELKADFQYQESQMRAKMNQ
Sbjct: 241 LDSPGTDHFVIIAQLKEEVATLKKMLHQKDQMILEKEKKITELKADFQYQESQMRAKMNQ 300

Query: 272 MEKTHKEVTEQLQAKNRELLKQAAALSKSKKSEKSGAITSP 312
           MEKTHKEVTEQLQAKNRELLKQAAALSKSKKSEKSGAITSP
Sbjct: 301 MEKTHKEVTEQLQAKNRELLKQAAALSKSKKSEKSGAITSP 341


>gi|219881540 hypothetical protein LOC199870 isoform 4 [Homo
           sapiens]
          Length = 278

 Score =  556 bits (1433), Expect = e-159
 Identities = 277/312 (88%), Positives = 277/312 (88%), Gaps = 34/312 (10%)

Query: 1   MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQERLECNGTISAHC 60
           MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQE            
Sbjct: 1   MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQES----------- 49

Query: 61  NLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQ 120
                                  KTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQ
Sbjct: 50  -----------------------KTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQ 86

Query: 121 RCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHL 180
           RCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHL
Sbjct: 87  RCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHL 146

Query: 181 SSSSRAGHQEKEQYSRLSGGGHYNSFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQK 240
           SSSSRAGHQEKEQYSRLSGGGHYNSFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQK
Sbjct: 147 SSSSRAGHQEKEQYSRLSGGGHYNSFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQK 206

Query: 241 DQMILEKEKKITELKADFQYQESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKS 300
           DQMILEKEKKITELKADFQYQESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKS
Sbjct: 207 DQMILEKEKKITELKADFQYQESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKS 266

Query: 301 KKSEKSGAITSP 312
           KKSEKSGAITSP
Sbjct: 267 KKSEKSGAITSP 278


>gi|22749341 hypothetical protein LOC199870 isoform 3 [Homo sapiens]
          Length = 307

 Score =  541 bits (1393), Expect = e-154
 Identities = 277/341 (81%), Positives = 277/341 (81%), Gaps = 63/341 (18%)

Query: 1   MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQERLECNGTISAHC 60
           MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQE            
Sbjct: 1   MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQES----------- 49

Query: 61  NLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQ 120
                                  KTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQ
Sbjct: 50  -----------------------KTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQ 86

Query: 121 RCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHL 180
           RCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHL
Sbjct: 87  RCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHL 146

Query: 181 SSSSRAGHQEKEQYSRLSGGGHYNS-----------------------------FSPDLA 211
           SSSSRAGHQEKEQYSRLSGGGHYNS                             FSPDLA
Sbjct: 147 SSSSRAGHQEKEQYSRLSGGGHYNSQKTLSTSSIQNEIPKKKSKFESITTNGDSFSPDLA 206

Query: 212 LDSPGTDHFVIIAQLKEEVATLKKMLHQKDQMILEKEKKITELKADFQYQESQMRAKMNQ 271
           LDSPGTDHFVIIAQLKEEVATLKKMLHQKDQMILEKEKKITELKADFQYQESQMRAKMNQ
Sbjct: 207 LDSPGTDHFVIIAQLKEEVATLKKMLHQKDQMILEKEKKITELKADFQYQESQMRAKMNQ 266

Query: 272 MEKTHKEVTEQLQAKNRELLKQAAALSKSKKSEKSGAITSP 312
           MEKTHKEVTEQLQAKNRELLKQAAALSKSKKSEKSGAITSP
Sbjct: 267 MEKTHKEVTEQLQAKNRELLKQAAALSKSKKSEKSGAITSP 307


>gi|221139693 hypothetical protein LOC199870 isoform 5 [Homo
           sapiens]
          Length = 227

 Score =  417 bits (1072), Expect = e-117
 Identities = 226/312 (72%), Positives = 226/312 (72%), Gaps = 85/312 (27%)

Query: 1   MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQERLECNGTISAHC 60
           MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQE            
Sbjct: 1   MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQES----------- 49

Query: 61  NLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQ 120
                                  KTNTICKKCAQNVQLYGT                   
Sbjct: 50  -----------------------KTNTICKKCAQNVQLYGT------------------- 67

Query: 121 RCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQRKHL 180
                                           VDGKLLCWLCTLSYKRVLQKTKEQRKHL
Sbjct: 68  --------------------------------VDGKLLCWLCTLSYKRVLQKTKEQRKHL 95

Query: 181 SSSSRAGHQEKEQYSRLSGGGHYNSFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQK 240
           SSSSRAGHQEKEQYSRLSGGGHYNSFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQK
Sbjct: 96  SSSSRAGHQEKEQYSRLSGGGHYNSFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQK 155

Query: 241 DQMILEKEKKITELKADFQYQESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKS 300
           DQMILEKEKKITELKADFQYQESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKS
Sbjct: 156 DQMILEKEKKITELKADFQYQESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKS 215

Query: 301 KKSEKSGAITSP 312
           KKSEKSGAITSP
Sbjct: 216 KKSEKSGAITSP 227


>gi|134288896 hypothetical protein LOC143684 [Homo sapiens]
          Length = 339

 Score =  389 bits (998), Expect = e-108
 Identities = 213/370 (57%), Positives = 244/370 (65%), Gaps = 93/370 (25%)

Query: 2   AALYACTKCHQRFPFEALSQGQQLCKECRIAHPVVKCTYCRTEYQQERLECNGTISAHCN 61
           +ALYACTKC QR+PFE LSQGQQLCKECRIAHP+VKCTYCR+E+QQE             
Sbjct: 4   SALYACTKCTQRYPFEELSQGQQLCKECRIAHPIVKCTYCRSEFQQES------------ 51

Query: 62  LHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYCNIIAAFIGNKCQR 121
                                 KTNTICKKCAQNV+ +GTPKPCQYCNIIAAFIG KCQR
Sbjct: 52  ----------------------KTNTICKKCAQNVKQFGTPKPCQYCNIIAAFIGTKCQR 89

Query: 122 CTNSEKKYGPPYSCEQCKQQCAFDRKDD-RKKVDGKLLCWLCTLSYKRVLQKTKEQRKHL 180
           CTNSEKKYGPP +CEQCKQQCAFDRK++ R+KVDGKLLCWLCTLSYKRVLQKTKEQRK L
Sbjct: 90  CTNSEKKYGPPQTCEQCKQQCAFDRKEEGRRKVDGKLLCWLCTLSYKRVLQKTKEQRKSL 149

Query: 181 ----SSSSRAGHQEKEQ------------YSRLSGGGH-YNSFSPD-------------- 209
               S+SS +   EK+Q            + R S   H  ++ SP+              
Sbjct: 150 GSSHSNSSSSSLTEKDQHHPKHHHHHHHHHHRHSSSHHKISNLSPEEEQGLWKQSHKSSA 209

Query: 210 --------------------------LALDSPGTDHFVIIAQLKEEVATLKKMLHQKDQM 243
                                      + DS GTD+FV+I+QLKEEV +LK++L Q+DQ 
Sbjct: 210 TIQNETPKKKPKLESKPSNGDSSSINQSADSGGTDNFVLISQLKEEVMSLKRLLQQRDQT 269

Query: 244 ILEKEKKITELKADFQYQESQMRAKMNQMEKTHKEVTEQLQAKNRELLKQAAALSKSKKS 303
           ILEK+KK+TELKADFQYQES +R KMN MEK HKE  EQLQAKNRELLKQ AALSK KK 
Sbjct: 270 ILEKDKKLTELKADFQYQESNLRTKMNSMEKAHKETVEQLQAKNRELLKQVAALSKGKKF 329

Query: 304 EKSGAI-TSP 312
           +KSG+I TSP
Sbjct: 330 DKSGSILTSP 339


>gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens]
          Length = 638

 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 6/66 (9%)

Query: 49  RLECNGTISAHCNLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYC 108
           RLEC+G ISAHC+LHLPGSSDSPAS+S++AG T    N       +  +L+ T K CQ C
Sbjct: 8   RLECSGAISAHCSLHLPGSSDSPASASQIAGTTDAIWNE-----QEKAELF-TDKFCQVC 61

Query: 109 NIIAAF 114
            ++  F
Sbjct: 62  GVMLQF 67


>gi|6005810 mitogen-activated protein kinase kinase kinase kinase 1
           isoform 2 [Homo sapiens]
          Length = 833

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 29/35 (82%), Positives = 33/35 (94%)

Query: 49  RLECNGTISAHCNLHLPGSSDSPASSSRVAGITGI 83
           RLEC+GTIS HCNL LPGSS+SPAS+SRVAGITG+
Sbjct: 799 RLECSGTISPHCNLLLPGSSNSPASASRVAGITGL 833


>gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens]
          Length = 475

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 1/47 (2%)

Query: 38  CTYCRTEYQQ-ERLECNGTISAHCNLHLPGSSDSPASSSRVAGITGI 83
           CT  RT+ +   RLEC+G I AHCNL LPGS DSPAS+S+ AG TG+
Sbjct: 419 CTTARTKSRSVTRLECSGMILAHCNLRLPGSRDSPASASQAAGTTGM 465


>gi|148839316 NIMA-related kinase 4 [Homo sapiens]
          Length = 841

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 27/35 (77%), Positives = 31/35 (88%)

Query: 49  RLECNGTISAHCNLHLPGSSDSPASSSRVAGITGI 83
           +LEC+GTI AH NL L GSSDSPAS+SRVAGITG+
Sbjct: 463 KLECSGTILAHSNLRLLGSSDSPASASRVAGITGV 497


>gi|170932471 hypothetical protein LOC79703 [Homo sapiens]
          Length = 677

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 26/33 (78%), Positives = 28/33 (84%)

Query: 49  RLECNGTISAHCNLHLPGSSDSPASSSRVAGIT 81
           R EC+G +SAHCNLHLPGSSDS AS  RVAGIT
Sbjct: 114 RPECSGAVSAHCNLHLPGSSDSHASVPRVAGIT 146


>gi|40807368 potassium channel regulator isoform 2 [Homo sapiens]
          Length = 229

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 28/35 (80%), Positives = 30/35 (85%)

Query: 49  RLECNGTISAHCNLHLPGSSDSPASSSRVAGITGI 83
           RL CNG ISAH NL L GSSDSPAS+SRVAGITG+
Sbjct: 193 RLVCNGVISAHHNLRLWGSSDSPASASRVAGITGM 227


>gi|58294160 breast carcinoma amplified sequence 4 isoform a [Homo
           sapiens]
          Length = 211

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 25/34 (73%), Positives = 30/34 (88%)

Query: 50  LECNGTISAHCNLHLPGSSDSPASSSRVAGITGI 83
           +EC+GTI A CNL LPGSSDSPAS+S+VAGIT +
Sbjct: 164 VECSGTIPARCNLRLPGSSDSPASASQVAGITEV 197


>gi|222446642 solute carrier family 36, member 3 isoform 1 [Homo
           sapiens]
          Length = 511

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 25/32 (78%), Positives = 28/32 (87%)

Query: 49  RLECNGTISAHCNLHLPGSSDSPASSSRVAGI 80
           RLEC+G ISAHCN HL GSS+SPA +SRVAGI
Sbjct: 143 RLECSGKISAHCNPHLQGSSNSPAQASRVAGI 174


>gi|24497440 interleukin 12 receptor, beta 1 isoform 2 precursor
           [Homo sapiens]
          Length = 381

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 26/35 (74%), Positives = 29/35 (82%)

Query: 53  NGTISAHCNLHLPGSSDSPASSSRVAGITGIKTNT 87
           +G ISAHCNL LP S DSPAS+SRVAGITGI  +T
Sbjct: 341 DGMISAHCNLRLPDSRDSPASASRVAGITGICHHT 375


>gi|61969666 arginine-fifty homeobox [Homo sapiens]
          Length = 315

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 22/36 (61%), Positives = 31/36 (86%)

Query: 49 RLECNGTISAHCNLHLPGSSDSPASSSRVAGITGIK 84
          +LEC+GT+SA+C+L+LPGS+D P S+SRVA  T I+
Sbjct: 41 KLECSGTVSAYCSLNLPGSTDPPTSASRVAATTAIR 76


>gi|28372523 intraflagellar transport protein IFT20 [Homo sapiens]
          Length = 148

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 27/51 (52%), Positives = 31/51 (60%), Gaps = 7/51 (13%)

Query: 49  RLECNGTISAHCNLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLY 99
           RLEC G ISAHC L L  SSDSP S SRV G TG        +C++  Q+Y
Sbjct: 78  RLECTGAISAHCKLCLSDSSDSPTSPSRVGGTTG-------HRCSELAQIY 121


>gi|118442834 RPGRIP1-like isoform a [Homo sapiens]
          Length = 1315

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 23/33 (69%), Positives = 26/33 (78%)

Query: 50   LECNGTISAHCNLHLPGSSDSPASSSRVAGITG 82
            L C+  ISAHCN  LPGSSD PAS+S+V GITG
Sbjct: 1106 LGCSSAISAHCNFRLPGSSDFPASASQVDGITG 1138


>gi|94680985 cyclin J-like [Homo sapiens]
          Length = 435

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 21/26 (80%), Positives = 25/26 (96%)

Query: 49  RLECNGTISAHCNLHLPGSSDSPASS 74
           RL+C+G ISAHCNLHLPGSS+SPAS+
Sbjct: 102 RLKCSGMISAHCNLHLPGSSNSPASA 127


>gi|239755619 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 261

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 24/32 (75%), Positives = 28/32 (87%)

Query: 49 RLECNGTISAHCNLHLPGSSDSPASSSRVAGI 80
          RLE +GTISA CNL L GSSDSPAS+S+VAG+
Sbjct: 13 RLEFSGTISARCNLRLLGSSDSPASASQVAGL 44


>gi|239750132 PREDICTED: hypothetical protein XP_002347267 [Homo
          sapiens]
          Length = 261

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 24/32 (75%), Positives = 28/32 (87%)

Query: 49 RLECNGTISAHCNLHLPGSSDSPASSSRVAGI 80
          RLE +GTISA CNL L GSSDSPAS+S+VAG+
Sbjct: 13 RLEFSGTISARCNLRLLGSSDSPASASQVAGL 44


>gi|239744440 PREDICTED: hypothetical protein XP_002343124 [Homo
          sapiens]
          Length = 261

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 24/32 (75%), Positives = 28/32 (87%)

Query: 49 RLECNGTISAHCNLHLPGSSDSPASSSRVAGI 80
          RLE +GTISA CNL L GSSDSPAS+S+VAG+
Sbjct: 13 RLEFSGTISARCNLRLLGSSDSPASASQVAGL 44


>gi|51243063 MAD2L1 binding protein isoform 1 [Homo sapiens]
          Length = 306

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 49  RLECNGTISAHCNLHLPGSSDSPASSSRVAGITGIKTNTICKKC-AQNVQLYGTPKPCQY 107
           RLE NG  SAH N  LPGS DSPAS+S+VA I  ++     ++  A  ++L  T    + 
Sbjct: 15  RLEHNGMTSAHHNFRLPGSRDSPASASQVAEIIDLEWYEKSEETHASQIELLETSSTQEP 74

Query: 108 CNIIAAFIGNKC 119
            N   AF    C
Sbjct: 75  LNASEAFCPRDC 86


>gi|231571356 nitric oxide synthase 3 isoform 4 [Homo sapiens]
          Length = 629

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 20/34 (58%), Positives = 27/34 (79%)

Query: 49  RLECNGTISAHCNLHLPGSSDSPASSSRVAGITG 82
           RLEC+ TI+AHC+L+L  SS+ P S+S+V G TG
Sbjct: 591 RLECSSTITAHCSLNLLDSSNPPTSTSQVVGTTG 624


>gi|148236061 hypothetical protein LOC285501 [Homo sapiens]
          Length = 109

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 22/41 (53%), Positives = 29/41 (70%)

Query: 45 YQQERLECNGTISAHCNLHLPGSSDSPASSSRVAGITGIKT 85
          +++ +LEC+G I AHCNL L GS     S+S+VAG TG KT
Sbjct: 17 WKKVKLECSGPILAHCNLCLLGSRHPSTSASQVAGTTGEKT 57


>gi|226342962 synaptotagmin XIV isoform 2 [Homo sapiens]
          Length = 600

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 14/169 (8%)

Query: 49  RLECNGTISAHCNLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYC 108
           RLE +GTI AHCN  L GS+DS AS+S+V G T +    +    A  V +          
Sbjct: 33  RLEYSGTILAHCNFRLLGSNDSSASASQVTGTT-VSPEAVGFLSAVGVFII-------LM 84

Query: 109 NIIAAFIGNK-CQRCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTL-SY 166
            ++  +I  K C          G  YS  +  Q   ++   D+ +           L  Y
Sbjct: 85  LLLFLYINKKFCFENVGGFPDLGSEYSTRKNSQDKIYNSYMDKDEHGSSSESEDEALGKY 144

Query: 167 KRVLQKTKEQRKHLSSSSRAGH--QEKEQYSRLSGGGHYNSFSPDLALD 213
              L +T   R  L+ S +  +  + +++YS LS    Y+ +S + ++D
Sbjct: 145 HEALSRTHNSRLPLADSRQRNYAWETRQKYSPLS--AEYDGYSSEASID 191


>gi|226342955 synaptotagmin XIV isoform 1 [Homo sapiens]
          Length = 619

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 14/169 (8%)

Query: 49  RLECNGTISAHCNLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYC 108
           RLE +GTI AHCN  L GS+DS AS+S+V G T +    +    A  V +          
Sbjct: 33  RLEYSGTILAHCNFRLLGSNDSSASASQVTGTT-VSPEAVGFLSAVGVFII-------LM 84

Query: 109 NIIAAFIGNK-CQRCTNSEKKYGPPYSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTL-SY 166
            ++  +I  K C          G  YS  +  Q   ++   D+ +           L  Y
Sbjct: 85  LLLFLYINKKFCFENVGGFPDLGSEYSTRKNSQDKIYNSYMDKDEHGSSSESEDEALGKY 144

Query: 167 KRVLQKTKEQRKHLSSSSRAGH--QEKEQYSRLSGGGHYNSFSPDLALD 213
              L +T   R  L+ S +  +  + +++YS LS    Y+ +S + ++D
Sbjct: 145 HEALSRTHNSRLPLADSRQRNYAWETRQKYSPLS--AEYDGYSSEASID 191


>gi|237858664 hypothetical protein LOC123207 isoform b [Homo
           sapiens]
          Length = 167

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 19/27 (70%), Positives = 23/27 (85%)

Query: 49  RLECNGTISAHCNLHLPGSSDSPASSS 75
           +LEC+G + AHCNLHL GSS SPAS+S
Sbjct: 141 KLECSGVVLAHCNLHLLGSSYSPASAS 167


>gi|58331120 hypothetical protein LOC29058 isoform 1 [Homo
          sapiens]
          Length = 183

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 21/29 (72%), Positives = 24/29 (82%)

Query: 49 RLECNGTISAHCNLHLPGSSDSPASSSRV 77
          RLE +G ISAHCNLHL  SSDS AS+SR+
Sbjct: 31 RLEPSGVISAHCNLHLLASSDSSASASRL 59


>gi|34147532 myosin, light chain 10, regulatory [Homo sapiens]
          Length = 226

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 21/28 (75%), Positives = 24/28 (85%)

Query: 49 RLECNGTISAHCNLHLPGSSDSPASSSR 76
          RLE NG ISAHCNL L GSS+SPAS+S+
Sbjct: 64 RLERNGMISAHCNLCLTGSSNSPASASQ 91


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.128    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,782,547
Number of Sequences: 37866
Number of extensions: 615312
Number of successful extensions: 4829
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 319
Number of HSP's that attempted gapping in prelim test: 3645
Number of HSP's gapped (non-prelim): 1481
length of query: 312
length of database: 18,247,518
effective HSP length: 102
effective length of query: 210
effective length of database: 14,385,186
effective search space: 3020889060
effective search space used: 3020889060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.