Search of human proteins with 21955158

Search of human proteins with 21955158

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21955158 phorbolin 1 [Homo sapiens]
         (199 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21955158 phorbolin 1 [Homo sapiens]                                428   e-120
gi|22907025 apolipoprotein B mRNA editing enzyme, catalytic poly...   358   1e-99
gi|13399304 apolipoprotein B mRNA editing enzyme, catalytic poly...   246   9e-66
gi|10190700 activation-induced cytidine deaminase [Homo sapiens]      138   3e-33
gi|22907044 apolipoprotein B mRNA editing enzyme, catalytic poly...   122   2e-28
gi|187608816 apolipoprotein B mRNA editing enzyme, catalytic pol...   120   1e-27
gi|22907039 apolipoprotein B mRNA editing enzyme, catalytic poly...   118   3e-27
gi|33147089 apolipoprotein B mRNA editing enzyme, catalytic poly...    97   9e-21
gi|5802978 apolipoprotein B mRNA editing enzyme, catalytic polyp...    89   2e-18
gi|61743957 apolipoprotein B mRNA editing enzyme [Homo sapiens]        71   7e-13
gi|38683855 pentatricopeptide repeat domain 3 [Homo sapiens]           28   6.7  
gi|156151402 hypothetical protein LOC80183 [Homo sapiens]              28   6.7  
gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [H...    27   8.8  
gi|169211272 PREDICTED: germ cell-specific gene 1-like protein 2...    27   8.8  
gi|169211660 PREDICTED: germ cell-specific gene 1-like protein 2...    27   8.8  
gi|169210878 PREDICTED: germ cell-specific gene 1-like protein 2...    27   8.8  
gi|4506749 ribonucleoside-diphosphate reductase M1 chain [Homo s...    27   8.8  

>gi|21955158 phorbolin 1 [Homo sapiens]
          Length = 199

 Score =  428 bits (1100), Expect = e-120
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAK 60
           MEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAK
Sbjct: 1   MEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAK 60

Query: 61  NLLCGFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHV 120
           NLLCGFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHV
Sbjct: 61  NLLCGFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHV 120

Query: 121 RLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLD 180
           RLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLD
Sbjct: 121 RLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLD 180

Query: 181 EHSQALSGRLRAILQNQGN 199
           EHSQALSGRLRAILQNQGN
Sbjct: 181 EHSQALSGRLRAILQNQGN 199


>gi|22907025 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3B [Homo sapiens]
          Length = 382

 Score =  358 bits (920), Expect = 1e-99
 Identities = 171/193 (88%), Positives = 178/193 (92%), Gaps = 3/193 (1%)

Query: 10  RHLMDPHIFTSNFNNG---IGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLLCGF 66
           R+LMDP  FT NFNN    + R +TYLCYEVERLDNGT V MDQH GFL N+AKNLLCGF
Sbjct: 190 RYLMDPDTFTFNFNNDPLVLRRRQTYLCYEVERLDNGTWVLMDQHMGFLCNEAKNLLCGF 249

Query: 67  YGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFA 126
           YGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFA
Sbjct: 250 YGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFA 309

Query: 127 ARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEHSQAL 186
           ARIYDYDPLYKEALQMLRDAGAQVSIMTYDEF++CWDTFV  QGCPFQPWDGL+EHSQAL
Sbjct: 310 ARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFEYCWDTFVYRQGCPFQPWDGLEEHSQAL 369

Query: 187 SGRLRAILQNQGN 199
           SGRLRAILQNQGN
Sbjct: 370 SGRLRAILQNQGN 382



 Score =  109 bits (273), Expect = 1e-24
 Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 16/193 (8%)

Query: 9   PRHLMDPHIFTSNFNNG---IGRHKTYLCYEVERLDNGTSVKMDQ--HRGFLHNQAKNLL 63
           P   M    F  NF N     GR  T+LCYEV+     +++  D    RG ++ + +   
Sbjct: 8   PMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGQVYFKPQY-- 65

Query: 64  CGFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLR 123
                 HAE+ FL      QL   + +++TWF+SW+PC    C  ++  FL E+ +V L 
Sbjct: 66  ------HAEMCFLSWFCGNQLPAYKCFQITWFVSWTPCPD--CVAKLAEFLSEHPNVTLT 117

Query: 124 IFAARIYDY-DPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEH 182
           I AAR+Y Y +  Y+ AL  L  AGA+V+IM Y+EF +CW+ FV ++G  F PW   DE+
Sbjct: 118 ISAARLYYYWERDYRRALCRLSQAGARVTIMDYEEFAYCWENFVYNEGQQFMPWYKFDEN 177

Query: 183 SQALSGRLRAILQ 195
              L   L+ IL+
Sbjct: 178 YAFLHRTLKEILR 190


>gi|13399304 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3G [Homo sapiens]
          Length = 384

 Score =  246 bits (628), Expect = 9e-66
 Identities = 126/193 (65%), Positives = 142/193 (73%), Gaps = 5/193 (2%)

Query: 10  RHLMDPHIFTSNFNNGI---GRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLLCGF 66
           RH MDP  FT NFNN     GRH+TYLCYEVER+ N T V ++Q RGFL NQA +     
Sbjct: 194 RHSMDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVLLNQRRGFLCNQAPHKHGFL 253

Query: 67  YGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFA 126
            GRHAEL FLD++P  +LD  Q YRVT F SWSPCFS  CA E+  F+ +N HV L IF 
Sbjct: 254 EGRHAELCFLDVIPFWKLDLDQDYRVTCFTSWSPCFS--CAQEMAKFISKNKHVSLCIFT 311

Query: 127 ARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEHSQAL 186
           ARIYD     +E L+ L +AGA++SIMTY EFKHCWDTFVDHQGCPFQPWDGLDEHSQ L
Sbjct: 312 ARIYDDQGRCQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGCPFQPWDGLDEHSQDL 371

Query: 187 SGRLRAILQNQGN 199
           SGRLRAILQNQ N
Sbjct: 372 SGRLRAILQNQEN 384



 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 70/189 (37%), Positives = 99/189 (52%), Gaps = 20/189 (10%)

Query: 18  FTSNFNNG---IGRHKTYLCYEVE-RLDNGTSVKMDQHRGFLHNQAKNLLCGFYGRHAEL 73
           F+ NF N      R+  +LCYEV+ +  +   +     RG ++++ K         H E+
Sbjct: 17  FSYNFYNRPILSRRNTVWLCYEVKTKGPSRPPLDAKIFRGQVYSELKY--------HPEM 68

Query: 74  RFLDLVPSLQ-LDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDY 132
           RF       + L   Q Y VTW+ISWSPC    C  ++  FL E+  V L IF AR+Y +
Sbjct: 69  RFFHWFSKWRKLHRDQEYEVTWYISWSPCTK--CTRDMATFLAEDPKVTLTIFVARLYYF 126

Query: 133 -DPLYKEALQML---RDAG-AQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEHSQALS 187
            DP Y+EAL+ L   RD   A + IM YDEF+HCW  FV  Q   F+PW+ L ++   L 
Sbjct: 127 WDPDYQEALRSLCQKRDGPRATMKIMNYDEFQHCWSKFVYSQRELFEPWNNLPKYYILLH 186

Query: 188 GRLRAILQN 196
             L  IL++
Sbjct: 187 IMLGEILRH 195


>gi|10190700 activation-induced cytidine deaminase [Homo sapiens]
          Length = 198

 Score =  138 bits (348), Expect = 3e-33
 Identities = 82/188 (43%), Positives = 110/188 (58%), Gaps = 17/188 (9%)

Query: 12  LMDPHIFTSNFNN---GIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLLCGFYG 68
           LM+   F   F N     GR +TYLCY V+R D+ TS  +D   G+L N  KN      G
Sbjct: 5   LMNRRKFLYQFKNVRWAKGRRETYLCYVVKRRDSATSFSLDF--GYLRN--KN------G 54

Query: 69  RHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAAR 128
            H EL FL  +    LDP + YRVTWF SWSPC+   CA  V  FL+ N ++ LRIF AR
Sbjct: 55  CHVELLFLRYISDWDLDPGRCYRVTWFTSWSPCYD--CARHVADFLRGNPNLSLRIFTAR 112

Query: 129 IYDYDP--LYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEHSQAL 186
           +Y  +      E L+ L  AG Q++IMT+ ++ +CW+TFV++    F+ W+GL E+S  L
Sbjct: 113 LYFCEDRKAEPEGLRRLHRAGVQIAIMTFKDYFYCWNTFVENHERTFKAWEGLHENSVRL 172

Query: 187 SGRLRAIL 194
           S +LR IL
Sbjct: 173 SRQLRRIL 180


>gi|22907044 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3F isoform a [Homo sapiens]
          Length = 373

 Score =  122 bits (307), Expect = 2e-28
 Identities = 76/192 (39%), Positives = 103/192 (53%), Gaps = 14/192 (7%)

Query: 9   PRHLMDPHIFTSNFNN---GIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAK-NLLC 64
           P   M PHIF  +F N     GR++++LC+ +E + + + V     RG   NQ      C
Sbjct: 191 PMEAMYPHIFYFHFKNLRKAYGRNESWLCFTMEVVKHHSPVSWK--RGVFRNQVDPETHC 248

Query: 65  GFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRI 124
                HAE  FL       L P   Y VTW+ SWSPC    CAGEV  FL  +++V L I
Sbjct: 249 -----HAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPE--CAGEVAEFLARHSNVNLTI 301

Query: 125 FAARIYDY-DPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEHS 183
           F AR+Y + D  Y+E L+ L   GA V IM Y +FK+CW+ FV +   PF+PW GL  + 
Sbjct: 302 FTARLYYFWDTDYQEGLRSLSQEGASVEIMGYKDFKYCWENFVYNDDEPFKPWKGLKYNF 361

Query: 184 QALSGRLRAILQ 195
             L  +L+ IL+
Sbjct: 362 LFLDSKLQEILE 373



 Score =  105 bits (263), Expect = 2e-23
 Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 17/185 (9%)

Query: 18  FTSNFNNG---IGRHKTYLCYEVERLDNGTSVKMDQH--RGFLHNQAKNLLCGFYGRHAE 72
           F+ NF N      R+  +LCYEV +    +  ++D    RG +++Q ++        HAE
Sbjct: 17  FSYNFYNRPILSRRNTVWLCYEV-KTKGPSRPRLDAKIFRGQVYSQPEH--------HAE 67

Query: 73  LRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDY 132
           + FL      QL   + +++TWF+SW+PC    C  ++  FL E+ +V L I AAR+Y Y
Sbjct: 68  MCFLSWFCGNQLPAYKCFQITWFVSWTPCPD--CVAKLAEFLAEHPNVTLTISAARLYYY 125

Query: 133 -DPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEHSQALSGRLR 191
            +  Y+ AL  L  AGA+V IM  +EF +CW+ FV  +G PF PW   D++   L   L+
Sbjct: 126 WERDYRRALCRLSQAGARVKIMDDEEFAYCWENFVYSEGQPFMPWYKFDDNYAFLHRTLK 185

Query: 192 AILQN 196
            IL+N
Sbjct: 186 EILRN 190


>gi|187608816 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3D [Homo sapiens]
          Length = 386

 Score =  120 bits (300), Expect = 1e-27
 Identities = 78/192 (40%), Positives = 100/192 (52%), Gaps = 14/192 (7%)

Query: 9   PRHLMDPHIFTSNFNN---GIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAK-NLLC 64
           P   M PHIF  +F N     GR++++LC+ +E   + ++V   + RG   NQ      C
Sbjct: 204 PMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVF--RKRGVFRNQVDPETHC 261

Query: 65  GFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRI 124
                HAE  FL       L P   Y VTW+ SWSPC    CAGEV  FL  +++V L I
Sbjct: 262 -----HAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPE--CAGEVAEFLARHSNVNLTI 314

Query: 125 FAARI-YDYDPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEHS 183
           F AR+ Y +D  Y+E L  L   GA V IM Y +F  CW  FV     PF+PW GL  + 
Sbjct: 315 FTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNF 374

Query: 184 QALSGRLRAILQ 195
           + L  RLR ILQ
Sbjct: 375 RLLKRRLREILQ 386



 Score =  110 bits (274), Expect = 1e-24
 Identities = 73/198 (36%), Positives = 105/198 (53%), Gaps = 12/198 (6%)

Query: 9   PRHLMDPHIFTSNFNNG---IGRHKTYLCYEVERLDNGTSVKMDQ--HRG-FLHNQAKNL 62
           P   M    F  NF N     GR  T+LCYEV+     +++  D    RG  L  +  N 
Sbjct: 8   PMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVLPKRQSNH 67

Query: 63  LCGFYGR---HAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTH 119
               Y R   HAE+ FL      +L   + +++TWF+SW+PC    C  +V  FL E+ +
Sbjct: 68  RQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLP--CVVKVTKFLAEHPN 125

Query: 120 VRLRIFAARIYDY-DPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDG 178
           V L I AAR+Y Y D  ++  L  L  AGA+V IM Y++F +CW+ FV ++G PF PW  
Sbjct: 126 VTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPFMPWYK 185

Query: 179 LDEHSQALSGRLRAILQN 196
            D++  +L   L+ IL+N
Sbjct: 186 FDDNYASLHRTLKEILRN 203


>gi|22907039 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3C [Homo sapiens]
          Length = 190

 Score =  118 bits (296), Expect = 3e-27
 Identities = 75/192 (39%), Positives = 99/192 (51%), Gaps = 14/192 (7%)

Query: 9   PRHLMDPHIFTSNFNN---GIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLL-C 64
           P   M P  F   F N      R++T+LC+ VE +   + V      G   NQ  +   C
Sbjct: 8   PMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKT--GVFRNQVDSETHC 65

Query: 65  GFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRI 124
                HAE  FL       L P   Y+VTW+ SWSPC    CAGEV  FL  +++V L I
Sbjct: 66  -----HAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPD--CAGEVAEFLARHSNVNLTI 118

Query: 125 FAARIYDYD-PLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEHS 183
           F AR+Y +  P Y+E L+ L   G  V IM Y++FK+CW+ FV +   PF+PW GL  + 
Sbjct: 119 FTARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNF 178

Query: 184 QALSGRLRAILQ 195
           + L  RLR  LQ
Sbjct: 179 RLLKRRLRESLQ 190


>gi|33147089 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 3H [Homo sapiens]
          Length = 183

 Score = 97.1 bits (240), Expect = 9e-21
 Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 26/196 (13%)

Query: 12  LMDPHIFTSNFNNGIGRHKTY------LCYEVERLDNGTSVKMDQHRGFLHNQAKNLLCG 65
           L+    F   FNN     + Y      LCY++   +  T       RG+  N+ K   C 
Sbjct: 3   LLTAETFRLQFNNKRRLRRPYYPRKALLCYQLTPQNGSTPT-----RGYFENKKK---C- 53

Query: 66  FYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIF 125
               HAE+ F++ + S+ LD  Q Y+VT +++WSPC S  CA E+  F++ + H+ L IF
Sbjct: 54  ----HAEICFINEIKSMGLDETQCYQVTCYLTWSPCSS--CAWELVDFIKAHDHLNLGIF 107

Query: 126 AARI-YDYDPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQG----CPFQPWDGLD 180
           A+R+ Y +    ++ L++L  +   V +M + EF  CW+ FVDH+      P++  + LD
Sbjct: 108 ASRLYYHWCKPQQKGLRLLCGSQVPVEVMGFPEFADCWENFVDHEKPLSFNPYKMLEELD 167

Query: 181 EHSQALSGRLRAILQN 196
           ++S+A+  RL  I Q+
Sbjct: 168 KNSRAIKRRLERIKQS 183


>gi|5802978 apolipoprotein B mRNA editing enzyme, catalytic
           polypeptide-like 2 [Homo sapiens]
          Length = 224

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 18/180 (10%)

Query: 21  NFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLLCGFYGRHAELRFLD-LV 79
           N     GR+KT+LCY VE    G  V+    RG+L ++           HAE  F + ++
Sbjct: 58  NVEYSSGRNKTFLCYVVEAQGKGGQVQAS--RGYLEDEHA-------AAHAEEAFFNTIL 108

Query: 80  PSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDYD-PLYKE 138
           P+   DPA  Y VTW++S SPC +  CA  +   L +  ++RL I   R++ ++ P  + 
Sbjct: 109 PAF--DPALRYNVTWYVSSSPCAA--CADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQA 164

Query: 139 ALQMLRDAGAQVSIMTYDEFKHCWDTFVDH---QGCPFQPWDGLDEHSQALSGRLRAILQ 195
           AL+ L++AG ++ IM   +F++ W  FV+    +   FQPW+ + E+      +L  IL+
Sbjct: 165 ALKKLKEAGCKLRIMKPQDFEYVWQNFVEQEEGESKAFQPWEDIQENFLYYEEKLADILK 224


>gi|61743957 apolipoprotein B mRNA editing enzyme [Homo sapiens]
          Length = 236

 Score = 70.9 bits (172), Expect = 7e-13
 Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 21/172 (12%)

Query: 2   EASPASGP---RHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQ 58
           E  P++G    R  ++P  F   ++    R +  L YE+         K    R    + 
Sbjct: 4   EKGPSTGDPTLRRRIEPWEFDVFYDPRELRKEACLLYEI---------KWGMSRKIWRSS 54

Query: 59  AKNLLCGFYGRHAELRFLDLVPSLQ-LDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQEN 117
            KN        H E+ F+    S +   P+    +TWF+SWSPC  W C+  +R FL  +
Sbjct: 55  GKNTT-----NHVEVNFIKKFTSERDFHPSMSCSITWFLSWSPC--WECSQAIREFLSRH 107

Query: 118 THVRLRIFAARIYDY-DPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDH 168
             V L I+ AR++ + D   ++ L+ L ++G  + IM   E+ HCW  FV++
Sbjct: 108 PGVTLVIYVARLFWHMDQQNRQGLRDLVNSGVTIQIMRASEYYHCWRNFVNY 159


>gi|38683855 pentatricopeptide repeat domain 3 [Homo sapiens]
          Length = 689

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 33  LCYEVERL----DNGTSVKMDQHRGFLHNQAKNLLCGFYGRHAELR-FLDLVPSLQLDPA 87
           L Y+V  L    DN   +  DQHR F +++  +L+C        L+ + DL+PS     +
Sbjct: 431 LAYQVHGLLKTGDNWKFIGPDQHRNFYYSKFFDLICLMEQIDVTLKWYEDLIPSAYFPHS 490

Query: 88  Q 88
           Q
Sbjct: 491 Q 491


>gi|156151402 hypothetical protein LOC80183 [Homo sapiens]
          Length = 662

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 169 QGCPFQPWDGLDEHSQALSGRLRAI 193
           Q  P +PW+G+ +HS  + G  R +
Sbjct: 9   QDSPVEPWEGISDHSGIIDGSPRLL 33


>gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [Homo
            sapiens]
          Length = 4515

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 165  FVDHQGCPFQPWDGLDEHSQALSGRLRAILQN 196
            FVD + C F PW  L  + Q L  R  ++L N
Sbjct: 2258 FVDIEQCEFIPWSDLVPNDQTLIQRGTSLLTN 2289


>gi|169211272 PREDICTED: germ cell-specific gene 1-like protein
           2-like [Homo sapiens]
          Length = 293

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 62  LLCGFYGRHAELRFLDLVP-SLQLDPAQIYRVTWFISWSPCFSWG 105
           +L G  G  A + +  +   ++ L P      TW   WS C +WG
Sbjct: 168 VLAGLLGMVAHMMYTTIFQITVNLGPEDWKPQTWDYGWSYCLAWG 212


>gi|169211660 PREDICTED: germ cell-specific gene 1-like protein
           2-like [Homo sapiens]
          Length = 293

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 62  LLCGFYGRHAELRFLDLVP-SLQLDPAQIYRVTWFISWSPCFSWG 105
           +L G  G  A + +  +   ++ L P      TW   WS C +WG
Sbjct: 168 VLAGLLGMVAHMMYTTIFQITVNLGPEDWKPQTWDYGWSYCLAWG 212


>gi|169210878 PREDICTED: germ cell-specific gene 1-like protein
           2-like [Homo sapiens]
          Length = 293

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 62  LLCGFYGRHAELRFLDLVP-SLQLDPAQIYRVTWFISWSPCFSWG 105
           +L G  G  A + +  +   ++ L P      TW   WS C +WG
Sbjct: 168 VLAGLLGMVAHMMYTTIFQITVNLGPEDWKPQTWDYGWSYCLAWG 212


>gi|4506749 ribonucleoside-diphosphate reductase M1 chain [Homo
           sapiens]
          Length = 792

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 8/73 (10%)

Query: 52  RGFLHNQAKNLLCGFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVR 111
           RG  H + KN +    G       +  +P +  D  Q+Y+  W IS         A E  
Sbjct: 648 RGLWHEEMKNQIIACNGS------IQSIPEIPDDLKQLYKTVWEISQKTVLK--MAAERG 699

Query: 112 AFLQENTHVRLRI 124
           AF+ ++  + + I
Sbjct: 700 AFIDQSQSLNIHI 712


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.139    0.461 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,878,974
Number of Sequences: 37866
Number of extensions: 320836
Number of successful extensions: 791
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 742
Number of HSP's gapped (non-prelim): 21
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.