PTCD3 27151

Name: PTCD3	Sequence: fasta or formatted (689aa)		NCBI GI: 38683855
Description: pentatricopeptide repeat domain 3		Referenced in: Small RNAs in RNA Processing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 55 2 C cysteine 1.7 12 1 D aspartate 6.1 42 3 E glutamate 7.3 50 3 F phenylalanine 4.5 31 2 G glycine 3.6 25 1 H histidine 2.5 17 2 I isoleucine 5.7 39 2 K lysine 6.4 44 3 L leucine 10.6 73 2 M methionine 2.8 19 1 N asparagine 3.6 25 2 P proline 4.4 30 2 Q glutamine 4.8 33 2 R arginine 5.5 38 2 S serine 8.3 57 3 T threonine 5.1 35 2 V valine 4.8 33 2 W tryptophan 1.3 9 1 Y tyrosine 3.2 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 pentatricopeptide repeat domain 3 PTCD1 0.010 pentatricopeptide repeat domain 1 CEP110 0.005 centrosomal protein 110kDa ITSN2 0.005 intersectin 2 isoform 1 ITSN2 0.005 intersectin 2 isoform 2 BCOR 0.005 BCL-6 interacting corepressor isoform a BCOR 0.005 BCL-6 interacting corepressor isoform c BCOR 0.005 BCL-6 interacting corepressor isoform b BCOR 0.005 BCL-6 interacting corepressor isoform a VPS37A 0.004 hepatocellular carcinoma related protein 1 isoform ... VPS37A 0.004 hepatocellular carcinoma related protein 1 isoform ... CACNA1I 0.004 calcium channel, voltage-dependent, T type, alpha 1I... CACNA1I 0.004 calcium channel, voltage-dependent, T type, alpha 1I... KIAA0391 0.004 mitochondrial RNase P protein 3 KIAA0922 0.004 hypothetical protein LOC23240 isoform 2 KIAA0922 0.004 hypothetical protein LOC23240 isoform 1 ITSN2 0.004 intersectin 2 isoform 3 ZCCHC10 0.004 zinc finger, CCHC domain containing 10 AP3B1 0.004 adaptor-related protein complex 3, beta 1 subunit [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.