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Search of human proteins with 219281831
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|219281831 F-box protein 15 isoform 2 [Homo sapiens]
(510 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|219281831 F-box protein 15 isoform 2 [Homo sapiens] 1067 0.0
gi|22749363 F-box protein 15 isoform 1 [Homo sapiens] 906 0.0
gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens] 47 4e-05
gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens] 47 4e-05
gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens] 47 4e-05
gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [H... 41 0.002
gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [H... 41 0.002
gi|16306595 S-phase kinase-associated protein 2 isoform 1 [Homo ... 37 0.043
gi|14249170 S-phase kinase-associated protein 2 isoform 2 [Homo ... 37 0.043
gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens] 35 0.16
gi|48928044 F-box only protein 8 [Homo sapiens] 34 0.28
gi|157743247 F-box protein 45 [Homo sapiens] 34 0.36
gi|74229029 F-box only protein 7 isoform 2 [Homo sapiens] 33 0.62
gi|74229027 F-box only protein 7 isoform 1 [Homo sapiens] 33 0.62
gi|16306582 F-box and leucine-rich repeat protein 2 [Homo sapiens] 33 0.62
gi|239756974 PREDICTED: hypothetical protein XP_002345129 [Homo ... 32 1.4
gi|239751487 PREDICTED: hypothetical protein XP_002347848 [Homo ... 32 1.4
gi|239750960 PREDICTED: hypothetical protein XP_002347618 [Homo ... 32 1.8
gi|239745366 PREDICTED: hypothetical protein XP_002343448 [Homo ... 32 1.8
gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens] 32 1.8
gi|49087132 sal-like 2 [Homo sapiens] 31 2.3
gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens] 31 3.1
gi|27312027 F-box only protein 16 [Homo sapiens] 31 3.1
gi|4502477 beta-transducin repeat containing protein isoform 2 [... 30 4.0
gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [H... 30 4.0
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H... 30 4.0
gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [H... 30 4.0
gi|16117783 beta-transducin repeat containing protein isoform 1 ... 30 4.0
gi|169172231 PREDICTED: hypothetical protein [Homo sapiens] 30 4.0
gi|169170975 PREDICTED: hypothetical protein [Homo sapiens] 30 4.0
>gi|219281831 F-box protein 15 isoform 2 [Homo sapiens]
Length = 510
Score = 1067 bits (2759), Expect = 0.0
Identities = 510/510 (100%), Positives = 510/510 (100%)
Query: 1 MATGRGRILQQHWLGLQTLRGPSRGGGAARGRARAFGCRKGPGVKLSAGSAALRCHAGGG 60
MATGRGRILQQHWLGLQTLRGPSRGGGAARGRARAFGCRKGPGVKLSAGSAALRCHAGGG
Sbjct: 1 MATGRGRILQQHWLGLQTLRGPSRGGGAARGRARAFGCRKGPGVKLSAGSAALRCHAGGG 60
Query: 61 QHWESSFSCCSGFLDGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGIYST 120
QHWESSFSCCSGFLDGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGIYST
Sbjct: 61 QHWESSFSCCSGFLDGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGIYST 120
Query: 121 AFSPARSNWKFNSVEKIAMSMSFLSVQDKEAGYWKKEYITKQIASVKAALADILKPVNPY 180
AFSPARSNWKFNSVEKIAMSMSFLSVQDKEAGYWKKEYITKQIASVKAALADILKPVNPY
Sbjct: 121 AFSPARSNWKFNSVEKIAMSMSFLSVQDKEAGYWKKEYITKQIASVKAALADILKPVNPY 180
Query: 181 TGLPVKTKEALRIFGLGWAIILKEKGGKEYIMEHVDLSINDTSVTVIWYGKKWPCLASLS 240
TGLPVKTKEALRIFGLGWAIILKEKGGKEYIMEHVDLSINDTSVTVIWYGKKWPCLASLS
Sbjct: 181 TGLPVKTKEALRIFGLGWAIILKEKGGKEYIMEHVDLSINDTSVTVIWYGKKWPCLASLS 240
Query: 241 TLDLCGMTPVFTDWYKTPTKHRLRWHSLIAKYNLSHLTISTMIGCDRLIRIFCLHPGLLV 300
TLDLCGMTPVFTDWYKTPTKHRLRWHSLIAKYNLSHLTISTMIGCDRLIRIFCLHPGLLV
Sbjct: 241 TLDLCGMTPVFTDWYKTPTKHRLRWHSLIAKYNLSHLTISTMIGCDRLIRIFCLHPGLLV 300
Query: 301 GVWKKEEELAFVMANLHFHHLVERSTLGSATIPYELPPHSPFLDDSPEYGLHGYQLHVDL 360
GVWKKEEELAFVMANLHFHHLVERSTLGSATIPYELPPHSPFLDDSPEYGLHGYQLHVDL
Sbjct: 301 GVWKKEEELAFVMANLHFHHLVERSTLGSATIPYELPPHSPFLDDSPEYGLHGYQLHVDL 360
Query: 361 HSGGVFYLCGTFRNLFTKRGNIENGHVKLIVIHLKNNREHLPLIGKVGLSWKTDIFDGCI 420
HSGGVFYLCGTFRNLFTKRGNIENGHVKLIVIHLKNNREHLPLIGKVGLSWKTDIFDGCI
Sbjct: 361 HSGGVFYLCGTFRNLFTKRGNIENGHVKLIVIHLKNNREHLPLIGKVGLSWKTDIFDGCI 420
Query: 421 KSCSMMDVTLLDEHGKPFWCFSSPVCLRSPATPSDSSSFLGQTYNVDYVDAEGRVHVELV 480
KSCSMMDVTLLDEHGKPFWCFSSPVCLRSPATPSDSSSFLGQTYNVDYVDAEGRVHVELV
Sbjct: 421 KSCSMMDVTLLDEHGKPFWCFSSPVCLRSPATPSDSSSFLGQTYNVDYVDAEGRVHVELV 480
Query: 481 WIRETEEYLIVNLVLYLSIAKINHWFGTEY 510
WIRETEEYLIVNLVLYLSIAKINHWFGTEY
Sbjct: 481 WIRETEEYLIVNLVLYLSIAKINHWFGTEY 510
>gi|22749363 F-box protein 15 isoform 1 [Homo sapiens]
Length = 434
Score = 906 bits (2342), Expect = 0.0
Identities = 434/434 (100%), Positives = 434/434 (100%)
Query: 77 MPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGIYSTAFSPARSNWKFNSVEK 136
MPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGIYSTAFSPARSNWKFNSVEK
Sbjct: 1 MPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGIYSTAFSPARSNWKFNSVEK 60
Query: 137 IAMSMSFLSVQDKEAGYWKKEYITKQIASVKAALADILKPVNPYTGLPVKTKEALRIFGL 196
IAMSMSFLSVQDKEAGYWKKEYITKQIASVKAALADILKPVNPYTGLPVKTKEALRIFGL
Sbjct: 61 IAMSMSFLSVQDKEAGYWKKEYITKQIASVKAALADILKPVNPYTGLPVKTKEALRIFGL 120
Query: 197 GWAIILKEKGGKEYIMEHVDLSINDTSVTVIWYGKKWPCLASLSTLDLCGMTPVFTDWYK 256
GWAIILKEKGGKEYIMEHVDLSINDTSVTVIWYGKKWPCLASLSTLDLCGMTPVFTDWYK
Sbjct: 121 GWAIILKEKGGKEYIMEHVDLSINDTSVTVIWYGKKWPCLASLSTLDLCGMTPVFTDWYK 180
Query: 257 TPTKHRLRWHSLIAKYNLSHLTISTMIGCDRLIRIFCLHPGLLVGVWKKEEELAFVMANL 316
TPTKHRLRWHSLIAKYNLSHLTISTMIGCDRLIRIFCLHPGLLVGVWKKEEELAFVMANL
Sbjct: 181 TPTKHRLRWHSLIAKYNLSHLTISTMIGCDRLIRIFCLHPGLLVGVWKKEEELAFVMANL 240
Query: 317 HFHHLVERSTLGSATIPYELPPHSPFLDDSPEYGLHGYQLHVDLHSGGVFYLCGTFRNLF 376
HFHHLVERSTLGSATIPYELPPHSPFLDDSPEYGLHGYQLHVDLHSGGVFYLCGTFRNLF
Sbjct: 241 HFHHLVERSTLGSATIPYELPPHSPFLDDSPEYGLHGYQLHVDLHSGGVFYLCGTFRNLF 300
Query: 377 TKRGNIENGHVKLIVIHLKNNREHLPLIGKVGLSWKTDIFDGCIKSCSMMDVTLLDEHGK 436
TKRGNIENGHVKLIVIHLKNNREHLPLIGKVGLSWKTDIFDGCIKSCSMMDVTLLDEHGK
Sbjct: 301 TKRGNIENGHVKLIVIHLKNNREHLPLIGKVGLSWKTDIFDGCIKSCSMMDVTLLDEHGK 360
Query: 437 PFWCFSSPVCLRSPATPSDSSSFLGQTYNVDYVDAEGRVHVELVWIRETEEYLIVNLVLY 496
PFWCFSSPVCLRSPATPSDSSSFLGQTYNVDYVDAEGRVHVELVWIRETEEYLIVNLVLY
Sbjct: 361 PFWCFSSPVCLRSPATPSDSSSFLGQTYNVDYVDAEGRVHVELVWIRETEEYLIVNLVLY 420
Query: 497 LSIAKINHWFGTEY 510
LSIAKINHWFGTEY
Sbjct: 421 LSIAKINHWFGTEY 434
>gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens]
Length = 843
Score = 47.0 bits (110), Expect = 4e-05
Identities = 27/78 (34%), Positives = 35/78 (44%)
Query: 49 GSAALRCHAGGGQHWESSFSCCSGFLDGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLA 108
G A R G S+ + +P E++LKIFSYL L CV +RF LA
Sbjct: 47 GHRAKRARVSGKSQDLSAAPAEQYLQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELA 106
Query: 109 NDNFIWIGIYSTAFSPAR 126
ND +W +Y F R
Sbjct: 107 NDPILWKRLYMEVFEYTR 124
>gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens]
Length = 686
Score = 47.0 bits (110), Expect = 4e-05
Identities = 27/78 (34%), Positives = 35/78 (44%)
Query: 49 GSAALRCHAGGGQHWESSFSCCSGFLDGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLA 108
G A R G S+ + +P E++LKIFSYL L CV +RF LA
Sbjct: 47 GHRAKRARVSGKSQDLSAAPAEQYLQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELA 106
Query: 109 NDNFIWIGIYSTAFSPAR 126
ND +W +Y F R
Sbjct: 107 NDPILWKRLYMEVFEYTR 124
>gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens]
Length = 585
Score = 47.0 bits (110), Expect = 4e-05
Identities = 27/78 (34%), Positives = 35/78 (44%)
Query: 49 GSAALRCHAGGGQHWESSFSCCSGFLDGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLA 108
G A R G S+ + +P E++LKIFSYL L CV +RF LA
Sbjct: 47 GHRAKRARVSGKSQDLSAAPAEQYLQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELA 106
Query: 109 NDNFIWIGIYSTAFSPAR 126
ND +W +Y F R
Sbjct: 107 NDPILWKRLYMEVFEYTR 124
>gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [Homo
sapiens]
Length = 565
Score = 41.2 bits (95), Expect = 0.002
Identities = 49/197 (24%), Positives = 79/197 (40%), Gaps = 39/197 (19%)
Query: 77 MPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGIYSTAFSPARSNWKFNSVEK 136
+P E++L IFSYL+ L VS ++ L +W +Y + AR +W +
Sbjct: 82 LPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLYPVHW--ARGDWYSGPATE 139
Query: 137 IAMSMSFLSVQDK-----------------EAGYWKKEYITKQIASV-KAALADILKPVN 178
+ V+++ E+ +E I IA + K L ++ V
Sbjct: 140 LDTEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVL 199
Query: 179 PYTGLPVKTKEALRIFGLGWAIILKEKGGKEYI-----MEHVDLSINDTSVTVI----WY 229
PY G VKT L ++ + K ++ + +EH+DL+ D S + W
Sbjct: 200 PYVGTSVKT------LVLAYSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDSWSWL 253
Query: 230 GKKWPCLASLSTLDLCG 246
G C SL LDL G
Sbjct: 254 G----CCQSLRHLDLSG 266
>gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [Homo
sapiens]
Length = 691
Score = 41.2 bits (95), Expect = 0.002
Identities = 49/197 (24%), Positives = 79/197 (40%), Gaps = 39/197 (19%)
Query: 77 MPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGIYSTAFSPARSNWKFNSVEK 136
+P E++L IFSYL+ L VS ++ L +W +Y + AR +W +
Sbjct: 208 LPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLYPVHW--ARGDWYSGPATE 265
Query: 137 IAMSMSFLSVQDK-----------------EAGYWKKEYITKQIASV-KAALADILKPVN 178
+ V+++ E+ +E I IA + K L ++ V
Sbjct: 266 LDTEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVL 325
Query: 179 PYTGLPVKTKEALRIFGLGWAIILKEKGGKEYI-----MEHVDLSINDTSVTVI----WY 229
PY G VKT L ++ + K ++ + +EH+DL+ D S + W
Sbjct: 326 PYVGTSVKT------LVLAYSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDSWSWL 379
Query: 230 GKKWPCLASLSTLDLCG 246
G C SL LDL G
Sbjct: 380 G----CCQSLRHLDLSG 392
>gi|16306595 S-phase kinase-associated protein 2 isoform 1 [Homo
sapiens]
Length = 424
Score = 37.0 bits (84), Expect = 0.043
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 75 DGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIW 114
D +P E+LL IFS L LL V +R+Y LA+D +W
Sbjct: 98 DSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 137
>gi|14249170 S-phase kinase-associated protein 2 isoform 2 [Homo
sapiens]
Length = 410
Score = 37.0 bits (84), Expect = 0.043
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 75 DGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIW 114
D +P E+LL IFS L LL V +R+Y LA+D +W
Sbjct: 98 DSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 137
>gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens]
Length = 436
Score = 35.0 bits (79), Expect = 0.16
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 77 MPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIW 114
+P E+LL+IFS+LD V+L VSR + LA D W
Sbjct: 28 LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNW 65
>gi|48928044 F-box only protein 8 [Homo sapiens]
Length = 319
Score = 34.3 bits (77), Expect = 0.28
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 74 LDGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGI 117
L+ +P E+ I SYL+A L CV + LAND +W G+
Sbjct: 71 LEMLPPELSFTILSYLNATDLCLASCV---WQDLANDELLWQGL 111
>gi|157743247 F-box protein 45 [Homo sapiens]
Length = 286
Score = 33.9 bits (76), Expect = 0.36
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 23/99 (23%)
Query: 19 LRGPSRGGGAARGRARAFGCRKGPGVKLSAGSAALRCHAGGGQHWESSFSCCSGFLDGMP 78
+ P+ G GAA G A GC G G AGS + AGG +P
Sbjct: 1 MAAPAPGAGAASGGA---GC-SGGGAGAGAGSGSGAAGAGGR----------------LP 40
Query: 79 SEILLKIFSYLDAVSLLCTGCVSRRFY---HLANDNFIW 114
S +L +FSYL+ L V + +Y H ++ +W
Sbjct: 41 SRVLELVFSYLELSELRSCALVCKHWYRCLHGDENSEVW 79
>gi|74229029 F-box only protein 7 isoform 2 [Homo sapiens]
Length = 443
Score = 33.1 bits (74), Expect = 0.62
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 77 MPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGIYSTAF 122
+P E+ L+IF LD S+L V R + +ND +W +Y F
Sbjct: 256 LPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDF 301
>gi|74229027 F-box only protein 7 isoform 1 [Homo sapiens]
Length = 522
Score = 33.1 bits (74), Expect = 0.62
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 77 MPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGIYSTAF 122
+P E+ L+IF LD S+L V R + +ND +W +Y F
Sbjct: 335 LPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDF 380
>gi|16306582 F-box and leucine-rich repeat protein 2 [Homo sapiens]
Length = 423
Score = 33.1 bits (74), Expect = 0.62
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 77 MPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIW 114
+P E+LL+IFS+LD V+L +S+ + LA D W
Sbjct: 15 LPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNW 52
>gi|239756974 PREDICTED: hypothetical protein XP_002345129 [Homo
sapiens]
Length = 169
Score = 32.0 bits (71), Expect = 1.4
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 10/45 (22%)
Query: 4 GRGRILQQHWLGLQTLRGPSRGGGAAR------GRARAFGCRKGP 42
GRGR + W G + P+ GGGAAR G ARA+G GP
Sbjct: 102 GRGRAHFRDWSGAE----PTFGGGAARASGIGGGAARAYGIGAGP 142
>gi|239751487 PREDICTED: hypothetical protein XP_002347848 [Homo
sapiens]
Length = 169
Score = 32.0 bits (71), Expect = 1.4
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 10/45 (22%)
Query: 4 GRGRILQQHWLGLQTLRGPSRGGGAAR------GRARAFGCRKGP 42
GRGR + W G + P+ GGGAAR G ARA+G GP
Sbjct: 102 GRGRAHFRDWSGAE----PTFGGGAARASGIGGGAARAYGIGAGP 142
>gi|239750960 PREDICTED: hypothetical protein XP_002347618 [Homo
sapiens]
Length = 100
Score = 31.6 bits (70), Expect = 1.8
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 23 SRGGGAARGRAR------AFGCRKGPGVKLSAGSAALRCHAGGGQHWESS 66
+RG AAR + + G R P V L A S+ + H+GG Q WESS
Sbjct: 46 ARGWAAARTQGQECAVFPGSGGRPVPRVPLLACSSGKQSHSGGRQQWESS 95
>gi|239745366 PREDICTED: hypothetical protein XP_002343448 [Homo
sapiens]
Length = 100
Score = 31.6 bits (70), Expect = 1.8
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 23 SRGGGAARGRAR------AFGCRKGPGVKLSAGSAALRCHAGGGQHWESS 66
+RG AAR + + G R P V L A S+ + H+GG Q WESS
Sbjct: 46 ARGWAAARTQGQECAVFPGSGGRPVPRVPLLACSSGKQSHSGGRQQWESS 95
>gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]
Length = 491
Score = 31.6 bits (70), Expect = 1.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 74 LDGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIW 114
+D +P +++IFS+L L V RR+Y+LA D +W
Sbjct: 114 IDRLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLW 154
>gi|49087132 sal-like 2 [Homo sapiens]
Length = 1007
Score = 31.2 bits (69), Expect = 2.3
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 8/48 (16%)
Query: 355 QLHVDLHSGGVFYLCGTFRNLFTKRGNIENGHVKLIVIHLKNNREHLP 402
Q+H+ H+G Y C N FT RGN++ +H +RE P
Sbjct: 389 QIHLRSHTGERPYKCNVCGNRFTTRGNLK--------VHFHRHREKYP 428
>gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens]
Length = 326
Score = 30.8 bits (68), Expect = 3.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 77 MPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGIYSTAFS 123
+P +LL+IFSYL + V R+ L +D ++W + T ++
Sbjct: 7 LPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDDRWLWRHVDLTLYT 53
>gi|27312027 F-box only protein 16 [Homo sapiens]
Length = 292
Score = 30.8 bits (68), Expect = 3.1
Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 17/87 (19%)
Query: 73 FLDGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGIYSTAFSPARSNWKFN 132
F +P + L IFS+LD SL V + +LA + +W+ R NW N
Sbjct: 88 FTTKLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLWM------LKCLRFNWYIN 141
Query: 133 SVEKIAMSMSFLSVQDKEAGYWKKEYI 159
S E G WKK YI
Sbjct: 142 -----------FSPTPFEQGIWKKHYI 157
>gi|4502477 beta-transducin repeat containing protein isoform 2
[Homo sapiens]
Length = 569
Score = 30.4 bits (67), Expect = 4.0
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 73 FLDGMPSE----ILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIW 114
F+ +P+ I I SYLDA SL V + +Y + +D +W
Sbjct: 144 FITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLW 189
>gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [Homo
sapiens]
Length = 589
Score = 30.4 bits (67), Expect = 4.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 73 FLDGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIW 114
F+ +P E+ L + S+L+ LL R + LA DN +W
Sbjct: 162 FISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLW 203
>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
sapiens]
Length = 707
Score = 30.4 bits (67), Expect = 4.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 73 FLDGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIW 114
F+ +P E+ L + S+L+ LL R + LA DN +W
Sbjct: 280 FISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLW 321
>gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [Homo
sapiens]
Length = 627
Score = 30.4 bits (67), Expect = 4.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 73 FLDGMPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIW 114
F+ +P E+ L + S+L+ LL R + LA DN +W
Sbjct: 200 FISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLW 241
>gi|16117783 beta-transducin repeat containing protein isoform 1
[Homo sapiens]
Length = 605
Score = 30.4 bits (67), Expect = 4.0
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 73 FLDGMPSE----ILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIW 114
F+ +P+ I I SYLDA SL V + +Y + +D +W
Sbjct: 180 FITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLW 225
>gi|169172231 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 30.4 bits (67), Expect = 4.0
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 14 LGLQTLRGPSRGGGAARGRARAFGCRKGPGVKLSAGSAALRCHAGG 59
LG + L GP RG A RG A A G R LS G+A +R AGG
Sbjct: 99 LGPRALCGP-RGWAAGRGEAGATGLR------LSVGAATVRGWAGG 137
>gi|169170975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 30.4 bits (67), Expect = 4.0
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 14 LGLQTLRGPSRGGGAARGRARAFGCRKGPGVKLSAGSAALRCHAGG 59
LG + L GP RG A RG A A G R LS G+A +R AGG
Sbjct: 99 LGPRALCGP-RGWAAGRGEAGATGLR------LSVGAATVRGWAGG 137
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.139 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,064,856
Number of Sequences: 37866
Number of extensions: 992987
Number of successful extensions: 2986
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2920
Number of HSP's gapped (non-prelim): 74
length of query: 510
length of database: 18,247,518
effective HSP length: 107
effective length of query: 403
effective length of database: 14,195,856
effective search space: 5720929968
effective search space used: 5720929968
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.