Guide to the Human Genome
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Search of human proteins with 218563686

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|218563686 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7 isoform b [Homo sapiens]
         (196 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|218563686 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and ...   409   e-115
gi|218563684 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and ...   409   e-115
gi|19923621 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and s...   365   e-101
gi|4504507 3 beta-hydroxysteroid dehydrogenase 1 [Homo sapiens]       125   3e-29
gi|4504509 3 beta-hydroxysteroid dehydrogenase 2 [Homo sapiens]       119   2e-27
gi|116268111 short chain dehydrogenase/reductase family 42E, mem...    69   3e-12
gi|193211614 NAD(P) dependent steroid dehydrogenase-like [Homo s...    65   3e-11
gi|8393516 NAD(P) dependent steroid dehydrogenase-like [Homo sap...    65   3e-11
gi|239745448 PREDICTED: hypothetical protein XP_002343493 [Homo ...    60   1e-09
gi|239756515 PREDICTED: similar to Putative 3-beta-HSD family pr...    60   2e-09
gi|239751020 PREDICTED: hypothetical protein XP_002347673 [Homo ...    60   2e-09
gi|7657641 TDP-glucose 4,6-dehydratase [Homo sapiens]                  48   6e-06
gi|56118217 UDP-galactose-4-epimerase [Homo sapiens]                   41   7e-04
gi|56237023 UDP-galactose-4-epimerase [Homo sapiens]                   41   7e-04
gi|189083684 UDP-galactose-4-epimerase [Homo sapiens]                  41   7e-04
gi|4502419 biliverdin reductase B (flavin reductase (NADPH)) [Ho...    32   0.45 
gi|98986461 neurogenic differentiation 2 [Homo sapiens]                30   1.7  
gi|239747656 PREDICTED: similar to mCG116201 [Homo sapiens]            29   2.2  
gi|164419758 bromodomain containing 2 [Homo sapiens]                   29   2.2  
gi|4826806 bromodomain containing 2 [Homo sapiens]                     29   2.2  
gi|19913369 transducin beta-like 3 [Homo sapiens]                      29   2.2  
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ...    28   3.8  
gi|40217788 Bardet-Biedl syndrome 12 [Homo sapiens]                    28   5.0  
gi|24233572 zinc finger protein 367 [Homo sapiens]                     28   5.0  
gi|42794760 acyl-CoA synthetase long-chain family member 5 isofo...    28   6.5  
gi|42794758 acyl-CoA synthetase long-chain family member 5 isofo...    28   6.5  
gi|42794756 acyl-CoA synthetase long-chain family member 5 isofo...    28   6.5  
gi|19743803 fibulin 5 precursor [Homo sapiens]                         28   6.5  
gi|4557293 autoimmune regulator isoform 2 [Homo sapiens]               27   8.5  
gi|42516563 UDP-glucuronate decarboxylase 1 [Homo sapiens]             27   8.5  

>gi|218563686 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
           steroid delta-isomerase 7 isoform b [Homo sapiens]
          Length = 196

 Score =  409 bits (1051), Expect = e-115
 Identities = 196/196 (100%), Positives = 196/196 (100%)

Query: 1   MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV 60
           MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV
Sbjct: 1   MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV 60

Query: 61  TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
           TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG
Sbjct: 61  TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120

Query: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKAML 180
           TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKAML
Sbjct: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKAML 180

Query: 181 PGCTCWQPGSWSSGQP 196
           PGCTCWQPGSWSSGQP
Sbjct: 181 PGCTCWQPGSWSSGQP 196


>gi|218563684 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
           steroid delta-isomerase 7 isoform b [Homo sapiens]
          Length = 196

 Score =  409 bits (1051), Expect = e-115
 Identities = 196/196 (100%), Positives = 196/196 (100%)

Query: 1   MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV 60
           MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV
Sbjct: 1   MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV 60

Query: 61  TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
           TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG
Sbjct: 61  TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120

Query: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKAML 180
           TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKAML
Sbjct: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKAML 180

Query: 181 PGCTCWQPGSWSSGQP 196
           PGCTCWQPGSWSSGQP
Sbjct: 181 PGCTCWQPGSWSSGQP 196


>gi|19923621 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
           steroid delta-isomerase 7 isoform a [Homo sapiens]
          Length = 369

 Score =  365 bits (938), Expect = e-101
 Identities = 181/187 (96%), Positives = 181/187 (96%), Gaps = 2/187 (1%)

Query: 1   MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV 60
           MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV
Sbjct: 1   MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV 60

Query: 61  TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
           TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG
Sbjct: 61  TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120

Query: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKAM- 179
           TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRK   
Sbjct: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKVRG 180

Query: 180 -LPGCTC 185
            LP  TC
Sbjct: 181 GLPLVTC 187


>gi|4504507 3 beta-hydroxysteroid dehydrogenase 1 [Homo sapiens]
          Length = 373

 Score =  125 bits (313), Expect = 3e-29
 Identities = 70/166 (42%), Positives = 99/166 (59%), Gaps = 4/166 (2%)

Query: 13  LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT---GPVRVTAIQGDVTQ 69
           LVTG  GFLG+ ++R+L+ +E  L E+RV D+  GP L E  +      ++T ++GD+  
Sbjct: 7   LVTGAGGFLGQRIIRLLV-KEKELKEIRVLDKAFGPELREEFSKLQNKTKLTVLEGDILD 65

Query: 70  AHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTGTRFLVYTSS 129
              +  A     V+IHTA ++DVFG    ++I  VNV+GT+ ++EACVQ      +YTSS
Sbjct: 66  EPFLKRACQDVSVIIHTACIIDVFGVTHRESIMNVNVKGTQLLLEACVQASVPVFIYTSS 125

Query: 130 MEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANG 175
           +EV GPN+       G+E+ P E     PYP SK LAE  VL ANG
Sbjct: 126 IEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANG 171


>gi|4504509 3 beta-hydroxysteroid dehydrogenase 2 [Homo sapiens]
          Length = 372

 Score =  119 bits (297), Expect = 2e-27
 Identities = 69/166 (41%), Positives = 96/166 (57%), Gaps = 4/166 (2%)

Query: 13  LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT---GPVRVTAIQGDVTQ 69
           LVTG  G LG+ +VR+L++ E  L E+R  D+   P L E  +      ++T ++GD+  
Sbjct: 6   LVTGAGGLLGQRIVRLLVE-EKELKEIRALDKAFRPELREEFSKLQNRTKLTVLEGDILD 64

Query: 70  AHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTGTRFLVYTSS 129
              +  A     VVIHTA ++DVFG    ++I  VNV+GT+ ++EACVQ      +YTSS
Sbjct: 65  EPFLKRACQDVSVVIHTACIIDVFGVTHRESIMNVNVKGTQLLLEACVQASVPVFIYTSS 124

Query: 130 MEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANG 175
           +EV GPN+       G+E+ P E     PYP SK LAE  VL ANG
Sbjct: 125 IEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANG 170


>gi|116268111 short chain dehydrogenase/reductase family 42E, member
           1 [Homo sapiens]
          Length = 393

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 60/178 (33%), Positives = 85/178 (47%), Gaps = 18/178 (10%)

Query: 3   DSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVTA 62
           D  ++QK   L+TGG G+ G  +   L Q    +    +FD          +T P  +  
Sbjct: 2   DPKRSQKESVLITGGSGYFGFRLGCALNQNGVHV---ILFDIS-----SPAQTIPEGIKF 53

Query: 63  IQGDVTQAHEVAAAVAGAHV--VIHTAGLVDVFGRA--SPKTIHEVNVQGTRNVIEACVQ 118
           IQGD+    +V  A   A V  V H A    + GR   +   I EVNV+GT N+++ C +
Sbjct: 54  IQGDIRHLSDVEKAFQDADVTCVFHIASY-GMSGREQLNRNLIKEVNVRGTDNILQVCQR 112

Query: 119 TGTRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHP--YPCSKALAEWLVLEAN 174
                LVYTS+  V+     G     G+E  PY  +H HP  Y  +K++AE  VLEAN
Sbjct: 113 RRVPRLVYTSTFNVI---FGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEAN 167


>gi|193211614 NAD(P) dependent steroid dehydrogenase-like [Homo
           sapiens]
          Length = 373

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 53/161 (32%), Positives = 72/161 (44%), Gaps = 15/161 (9%)

Query: 14  VTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVTAIQGDVTQAHEV 73
           V GG GFLG+H+V  LL R   +    VFD   G           +V    GD+    ++
Sbjct: 42  VIGGSGFLGQHMVEQLLARGYAVN---VFDIQQG-------FDNPQVRFFLGDLCSRQDL 91

Query: 74  AAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTGTRFLVYTSSMEVV 133
             A+ G + V H A         + +  + VN  GT+NVIE C + G + L+ TSS  V+
Sbjct: 92  YPALKGVNTVFHCASPPP--SSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVI 149

Query: 134 GPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEAN 174
               +G     G ED PY       Y  +K L E  VL AN
Sbjct: 150 ---FEGVDIKNGTEDLPYAMKPIDYYTETKILQERAVLGAN 187


>gi|8393516 NAD(P) dependent steroid dehydrogenase-like [Homo
           sapiens]
          Length = 373

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 53/161 (32%), Positives = 72/161 (44%), Gaps = 15/161 (9%)

Query: 14  VTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVTAIQGDVTQAHEV 73
           V GG GFLG+H+V  LL R   +    VFD   G           +V    GD+    ++
Sbjct: 42  VIGGSGFLGQHMVEQLLARGYAVN---VFDIQQG-------FDNPQVRFFLGDLCSRQDL 91

Query: 74  AAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTGTRFLVYTSSMEVV 133
             A+ G + V H A         + +  + VN  GT+NVIE C + G + L+ TSS  V+
Sbjct: 92  YPALKGVNTVFHCASPPP--SSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVI 149

Query: 134 GPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEAN 174
               +G     G ED PY       Y  +K L E  VL AN
Sbjct: 150 ---FEGVDIKNGTEDLPYAMKPIDYYTETKILQERAVLGAN 187


>gi|239745448 PREDICTED: hypothetical protein XP_002343493 [Homo
           sapiens]
          Length = 422

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 17/185 (9%)

Query: 2   ADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVT 61
           A   +A +   LVTGG G+LG  +   L +       + + D+    W    +T      
Sbjct: 26  AKPTKAARQKVLVTGGGGYLGFSLGSHLAKSGT---SVILLDRRRPQWELSPET-----K 77

Query: 62  AIQGDVTQAHEVAAAVAGAHVVIHTAGL-VDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
            IQ DV     +  A  G   V H A   +    +   + I  +NV GT+ VI+ CV+  
Sbjct: 78  FIQADVRDEEALYRAFEGVDCVFHVASYGMSGAEKLQKEQIESINVGGTKLVIDVCVRRR 137

Query: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDT-PYEAVHRH--PYPCSKALAEWLVLEANGRK 177
              L+YTS++ V      G P  +G+ED+ PY  +  H   Y  +KA+A+ L L ANG  
Sbjct: 138 VPRLIYTSTVNVA---FGGKPIEQGDEDSVPYFPLDEHVDHYSRTKAIADQLTLMANGMP 194

Query: 178 AMLPG 182
             LPG
Sbjct: 195 --LPG 197


>gi|239756515 PREDICTED: similar to Putative 3-beta-HSD family
           protein ENSP00000330812 [Homo sapiens]
          Length = 422

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 17/185 (9%)

Query: 2   ADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVT 61
           A   +A +   LVTGG G+LG  +   L +       + + D+    W    +T      
Sbjct: 26  AKPTKAARQKVLVTGGGGYLGFSLGSHLAKSGT---SVILLDRRRPQWELSPET-----K 77

Query: 62  AIQGDVTQAHEVAAAVAGAHVVIHTAGL-VDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
            IQ DV     +  A  G   V H A   +    +   + I  +NV GT+ VI+ CV+  
Sbjct: 78  FIQADVRDEEALYHAFEGVDCVFHVASYGMSGAEKLQKEQIESINVGGTKLVIDVCVRRR 137

Query: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDT-PYEAVHRH--PYPCSKALAEWLVLEANGRK 177
              L+YTS++ V      G P  +G+ED+ PY  +  H   Y  +KA+A+ L L ANG  
Sbjct: 138 VPRLIYTSTVNVA---FGGKPIEQGDEDSVPYFPLDEHVDHYSRTKAIADQLTLMANGMP 194

Query: 178 AMLPG 182
             LPG
Sbjct: 195 --LPG 197


>gi|239751020 PREDICTED: hypothetical protein XP_002347673 [Homo
           sapiens]
          Length = 422

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 17/185 (9%)

Query: 2   ADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVT 61
           A   +A +   LVTGG G+LG  +   L +       + + D+    W    +T      
Sbjct: 26  AKPTKAARQKVLVTGGGGYLGFSLGSHLAKSGT---SVILLDRRRPQWELSPET-----K 77

Query: 62  AIQGDVTQAHEVAAAVAGAHVVIHTAGL-VDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
            IQ DV     +  A  G   V H A   +    +   + I  +NV GT+ VI+ CV+  
Sbjct: 78  FIQADVRDEEALYHAFEGVDCVFHVASYGMSGAEKLQKEQIESINVGGTKLVIDVCVRRR 137

Query: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDT-PYEAVHRH--PYPCSKALAEWLVLEANGRK 177
              L+YTS++ V      G P  +G+ED+ PY  +  H   Y  +KA+A+ L L ANG  
Sbjct: 138 VPRLIYTSTVNVA---FGGKPIEQGDEDSVPYFPLDEHVDHYSRTKAIADQLTLMANGMP 194

Query: 178 AMLPG 182
             LPG
Sbjct: 195 --LPG 197


>gi|7657641 TDP-glucose 4,6-dehydratase [Homo sapiens]
          Length = 350

 Score = 47.8 bits (112), Expect = 6e-06
 Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 15/165 (9%)

Query: 13  LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT--GPVRVTAIQGDVTQA 70
           LVTGG GF+  H++  L++  P    + +        L+ L+T         IQGD+  +
Sbjct: 21  LVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDICDS 80

Query: 71  H--EVAAAVAGAHVVIHTAGLVDV---FGRASPKTIHEVNVQGTRNVIEACVQTGTRFLV 125
           H  ++        +V+H A    V   F RA   T   VNV GT  ++ A  +      +
Sbjct: 81  HFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTY--VNVYGTHVLVSAAHEARVEKFI 138

Query: 126 YTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLV 170
           Y S+ EV G    G      +E +P +    +PY  SKA AE  V
Sbjct: 139 YVSTDEVYG----GSLDKEFDESSPKQPT--NPYASSKAAAECFV 177


>gi|56118217 UDP-galactose-4-epimerase [Homo sapiens]
          Length = 348

 Score = 40.8 bits (94), Expect = 7e-04
 Identities = 50/163 (30%), Positives = 67/163 (41%), Gaps = 35/163 (21%)

Query: 13  LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHL-------GPWLEELKTGPVRVTAIQG 65
           LVTGG G++G H V  LL+     G L V   +        G   E L+    RV  + G
Sbjct: 6   LVTGGAGYIGSHTVLELLE----AGYLPVVIDNFHNAFRGGGSLPESLR----RVQELTG 57

Query: 66  DVTQAHEVAAAVAGA----------HVVIHTAGLVDVFGRA--SPKTIHEVNVQGTRNVI 113
              +  E+     GA            VIH AGL  V G +   P   + VN+ GT  ++
Sbjct: 58  RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAV-GESVQKPLDYYRVNLTGTIQLL 116

Query: 114 EACVQTGTRFLVYTSSMEVVG-----PNTKGHPFYRGNEDTPY 151
           E     G + LV++SS  V G     P  + HP   G    PY
Sbjct: 117 EIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHP--TGGCTNPY 157


>gi|56237023 UDP-galactose-4-epimerase [Homo sapiens]
          Length = 348

 Score = 40.8 bits (94), Expect = 7e-04
 Identities = 50/163 (30%), Positives = 67/163 (41%), Gaps = 35/163 (21%)

Query: 13  LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHL-------GPWLEELKTGPVRVTAIQG 65
           LVTGG G++G H V  LL+     G L V   +        G   E L+    RV  + G
Sbjct: 6   LVTGGAGYIGSHTVLELLE----AGYLPVVIDNFHNAFRGGGSLPESLR----RVQELTG 57

Query: 66  DVTQAHEVAAAVAGA----------HVVIHTAGLVDVFGRA--SPKTIHEVNVQGTRNVI 113
              +  E+     GA            VIH AGL  V G +   P   + VN+ GT  ++
Sbjct: 58  RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAV-GESVQKPLDYYRVNLTGTIQLL 116

Query: 114 EACVQTGTRFLVYTSSMEVVG-----PNTKGHPFYRGNEDTPY 151
           E     G + LV++SS  V G     P  + HP   G    PY
Sbjct: 117 EIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHP--TGGCTNPY 157


>gi|189083684 UDP-galactose-4-epimerase [Homo sapiens]
          Length = 348

 Score = 40.8 bits (94), Expect = 7e-04
 Identities = 50/163 (30%), Positives = 67/163 (41%), Gaps = 35/163 (21%)

Query: 13  LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHL-------GPWLEELKTGPVRVTAIQG 65
           LVTGG G++G H V  LL+     G L V   +        G   E L+    RV  + G
Sbjct: 6   LVTGGAGYIGSHTVLELLE----AGYLPVVIDNFHNAFRGGGSLPESLR----RVQELTG 57

Query: 66  DVTQAHEVAAAVAGA----------HVVIHTAGLVDVFGRA--SPKTIHEVNVQGTRNVI 113
              +  E+     GA            VIH AGL  V G +   P   + VN+ GT  ++
Sbjct: 58  RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAV-GESVQKPLDYYRVNLTGTIQLL 116

Query: 114 EACVQTGTRFLVYTSSMEVVG-----PNTKGHPFYRGNEDTPY 151
           E     G + LV++SS  V G     P  + HP   G    PY
Sbjct: 117 EIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHP--TGGCTNPY 157


>gi|4502419 biliverdin reductase B (flavin reductase (NADPH)) [Homo
           sapiens]
          Length = 206

 Score = 31.6 bits (70), Expect = 0.45
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 6/86 (6%)

Query: 56  GPVRVTAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEA 115
           GP     + GDV QA +V   VAG   VI    L+      SP T+     +G RN++ A
Sbjct: 44  GPRPAHVVVGDVLQAADVDKTVAGQDAVI---VLLGTRNDLSPTTVMS---EGARNIVAA 97

Query: 116 CVQTGTRFLVYTSSMEVVGPNTKGHP 141
               G   +V  +S  ++   TK  P
Sbjct: 98  MKAHGVDKVVACTSAFLLWDPTKVPP 123


>gi|98986461 neurogenic differentiation 2 [Homo sapiens]
          Length = 382

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 11/58 (18%)

Query: 107 QGTRNVIEACVQTGTRFLVYTSSMEVVGP-NTKGHPFYRGNEDTPYEAVHRHPYPCSK 163
           Q T N++  C+Q  +R  +     +  G  +  G PF          A+H +PYPCS+
Sbjct: 198 QPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPF----------AMHPYPYPCSR 245


>gi|239747656 PREDICTED: similar to mCG116201 [Homo sapiens]
          Length = 591

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 23  EHVVRMLLQREPRLGELRV-FDQHLGPWLEELKTGP 57
           EH +R LL R  + G LR+  DQ LG ++E LK+ P
Sbjct: 119 EHQIRDLLSRTKKPGGLRIRGDQQLGFYVEGLKSVP 154


>gi|164419758 bromodomain containing 2 [Homo sapiens]
          Length = 801

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)

Query: 59  RVTAIQGDVTQAHEVAAAVAGAHVVIHT 86
           ++ A+QG VT AH+V A  + +H  ++T
Sbjct: 201 KLAALQGSVTSAHQVPAVSSVSHTALYT 228


>gi|4826806 bromodomain containing 2 [Homo sapiens]
          Length = 801

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)

Query: 59  RVTAIQGDVTQAHEVAAAVAGAHVVIHT 86
           ++ A+QG VT AH+V A  + +H  ++T
Sbjct: 201 KLAALQGSVTSAHQVPAVSSVSHTALYT 228


>gi|19913369 transducin beta-like 3 [Homo sapiens]
          Length = 808

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 149 TPYEAVHRHPYPCSKALAEWLVLEANGRKAMLPGCTCWQPGS 190
           T  +A+ R P  C K  A  L L  + ++A+L  C  W   S
Sbjct: 684 TVIQAIRRDPEACEKLEATMLRLRRDQKEALLRFCVTWNTNS 725


>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
           sapiens]
          Length = 935

 Score = 28.5 bits (62), Expect = 3.8
 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 146 NEDTPYEAVHRHPYPCSKALA---EWLVLEANGRKAMLPGCTCWQPGSWSSGQP 196
           NED   EA  RHP PC K+ A     +   A  + A LP     +   WS   P
Sbjct: 702 NEDAAGEAERRHPPPCHKSPALKLPGMTTGATTQTATLPDGQTDRARPWSPPAP 755


>gi|40217788 Bardet-Biedl syndrome 12 [Homo sapiens]
          Length = 710

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 37  GELRVFDQHLGPWLEELKTGPVRVTAIQGDVTQ 69
           G + V      P ++EL+  PVR+  I+GD+T+
Sbjct: 333 GYITVVSVSNNPVIKELQNQPVRIVLIEGDLTE 365


>gi|24233572 zinc finger protein 367 [Homo sapiens]
          Length = 350

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 140 HPFYRGNEDTPYEAVHRHPYPCSKALAEWL 169
           HP+ R   + P + + +H    +KA AEWL
Sbjct: 246 HPYARLKREEPTDTLSKHQAADNKAAAEWL 275


>gi|42794760 acyl-CoA synthetase long-chain family member 5 isoform
           b [Homo sapiens]
          Length = 683

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)

Query: 170 VLEANGRKAMLPGCTCWQPGSWSSG 194
           V EA G+     GCT   PG W+SG
Sbjct: 439 VYEAYGQTECTGGCTFTLPGDWTSG 463


>gi|42794758 acyl-CoA synthetase long-chain family member 5 isoform
           b [Homo sapiens]
          Length = 683

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)

Query: 170 VLEANGRKAMLPGCTCWQPGSWSSG 194
           V EA G+     GCT   PG W+SG
Sbjct: 439 VYEAYGQTECTGGCTFTLPGDWTSG 463


>gi|42794756 acyl-CoA synthetase long-chain family member 5 isoform
           a [Homo sapiens]
          Length = 739

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)

Query: 170 VLEANGRKAMLPGCTCWQPGSWSSG 194
           V EA G+     GCT   PG W+SG
Sbjct: 495 VYEAYGQTECTGGCTFTLPGDWTSG 519


>gi|19743803 fibulin 5 precursor [Homo sapiens]
          Length = 448

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 104 VNVQGTRNVIEACVQTGTRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCS 162
           +++   R + EAC   G    V  +   +  P T  +P YRG    PY   +  PYP +
Sbjct: 41  LDIDECRTIPEAC--RGDMMCVNQNGGYLCIPRT--NPVYRGPYSNPYSTPYSGPYPAA 95


>gi|4557293 autoimmune regulator isoform 2 [Homo sapiens]
          Length = 348

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 179 MLPGCTCWQPGSWSSG 194
           M PG  CW+P  W +G
Sbjct: 26  MAPGGVCWRPDGWGTG 41


>gi|42516563 UDP-glucuronate decarboxylase 1 [Homo sapiens]
          Length = 420

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 23/137 (16%)

Query: 13  LVTGGCGFLGEHVVRMLLQREPRL--------GELRVFDQHLGPWLEELKTGPVRVTAIQ 64
           L+TGG GF+G H+   L+     +        G  R  +  +G    EL    V V  + 
Sbjct: 92  LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV-VEPLY 150

Query: 65  GDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTGTRFL 124
            +V Q + +A+  +  + +             +P    + N  GT N++    + G R L
Sbjct: 151 IEVDQIYHLASPASPPNYMY------------NPIKTLKTNTIGTLNMLGLAKRVGARLL 198

Query: 125 VYTSSMEVVGPNTKGHP 141
           +  S+ EV G + + HP
Sbjct: 199 L-ASTSEVYG-DPEVHP 213


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,235,821
Number of Sequences: 37866
Number of extensions: 354771
Number of successful extensions: 723
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 678
Number of HSP's gapped (non-prelim): 30
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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