SDR42E1 1765

Name: SDR42E1	Sequence: fasta or formatted (393aa)		NCBI GI: 116268111
Description: short chain dehydrogenase/reductase family 42E, member 1		Referenced in: Cholesterol Biosynthesis Steroid Hormones
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 21 1 C cysteine 1.5 6 1 D aspartate 4.6 18 1 E glutamate 5.3 21 1 F phenylalanine 6.6 26 2 G glycine 8.4 33 2 H histidine 3.6 14 1 I isoleucine 5.9 23 2 K lysine 4.1 16 2 L leucine 10.9 43 2 M methionine 1.0 4 1 N asparagine 3.3 13 2 P proline 5.1 20 1 Q glutamine 4.1 16 1 R arginine 6.6 26 3 S serine 6.6 26 2 T threonine 4.3 17 1 V valine 8.1 32 1 W tryptophan 0.8 3 1 Y tyrosine 3.8 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 short chain dehydrogenase/reductase family 42E, mem... LOC100288072 0.416 PREDICTED: hypothetical protein XP_002343493 LOC100292512 0.415 PREDICTED: similar to Putative 3-beta-HSD family pr... LOC100291543 0.415 PREDICTED: hypothetical protein XP_002347673 NSDHL 0.193 NAD(P) dependent steroid dehydrogenase-like NSDHL 0.193 NAD(P) dependent steroid dehydrogenase-like HSD3B2 0.133 3 beta-hydroxysteroid dehydrogenase 2 HSD3B7 0.127 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and s... HSD3B1 0.125 3 beta-hydroxysteroid dehydrogenase 1 HSD3B7 0.057 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and ... HSD3B7 0.057 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and ... TGDS 0.047 TDP-glucose 4,6-dehydratase GALE 0.028 UDP-galactose-4-epimerase GALE 0.028 UDP-galactose-4-epimerase GALE 0.028 UDP-galactose-4-epimerase UXS1 0.010 UDP-glucuronate decarboxylase 1 IARS2 0.005 mitochondrial isoleucine tRNA synthetase INHBB 0.005 inhibin beta B subunit preproprotein KIF1B 0.005 kinesin family member 1B isoform b MAT2B 0.005 methionine adenosyltransferase II, beta isoform 2 [H... MAT2B 0.005 methionine adenosyltransferase II, beta isoform 1 [H... ZNF816A 0.005 zinc finger protein 816A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.