Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: HSD3B7 Sequence: fasta or formatted (196aa) NCBI GI: 218563686
Description:

hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 isoform b

Referenced in:

Bile Acids and Other Cholesterol Derivatives
Steroid Hormones

Other entries for this name:
alt prot [369aa] hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-...
alt mRNA [196aa] hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         18           3
 C cysteine            2.6          5           1
 D aspartate           2.6          5           1
 E glutamate           6.6         13           2
 F phenylalanine       2.6          5           1
 G glycine            10.2         20           2
 H histidine           4.6          9           1
 I isoleucine          2.0          4           1
 K lysine              3.1          6           1
 L leucine             8.2         16           2
 M methionine          2.0          4           1
 N asparagine          2.6          5           1
 P proline             6.1         12           1
 Q glutamine           5.1         10           1
 R arginine            5.6         11           1
 S serine              4.1          8           2
 T threonine           6.6         13           1
 V valine             11.7         23           2
 W tryptophan          2.0          4           1
 Y tyrosine            2.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hydroxy-delta-5-steroid dehydrogenase, 3 beta- and ... 
HSD3B7                1.000   hydroxy-delta-5-steroid dehydrogenase, 3 beta- and ...
HSD3B7                0.885   hydroxy-delta-5-steroid dehydrogenase, 3 beta- and s...
HSD3B1                0.260   3 beta-hydroxysteroid dehydrogenase 1 
HSD3B2                0.245   3 beta-hydroxysteroid dehydrogenase 2 
SDR42E1               0.115   short chain dehydrogenase/reductase family 42E, mem...
NSDHL                 0.104   NAD(P) dependent steroid dehydrogenase-like 
NSDHL                 0.104   NAD(P) dependent steroid dehydrogenase-like 
LOC100288072          0.091   PREDICTED: hypothetical protein XP_002343493 
LOC100292512          0.091   PREDICTED: similar to Putative 3-beta-HSD family pr...
LOC100291543          0.091   PREDICTED: hypothetical protein XP_002347673 
TGDS                  0.060   TDP-glucose 4,6-dehydratase 
GALE                  0.042   UDP-galactose-4-epimerase 
GALE                  0.042   UDP-galactose-4-epimerase 
GALE                  0.042   UDP-galactose-4-epimerase 
BLVRB                 0.018   biliverdin reductase B (flavin reductase (NADPH)) [Ho...
NEUROD2               0.013   neurogenic differentiation 2 
LOC100131773          0.010   PREDICTED: similar to mCG116201 
BRD2                  0.010   bromodomain containing 2 
BRD2                  0.010   bromodomain containing 2 
TBL3                  0.010   transducin beta-like 3 
LOC100290023          0.008   PREDICTED: hypothetical protein XP_002348147 
BBS12                 0.008   Bardet-Biedl syndrome 12 
ZNF367                0.008   zinc finger protein 367 
ACSL5                 0.008   acyl-CoA synthetase long-chain family member 5 isofo...
ACSL5                 0.008   acyl-CoA synthetase long-chain family member 5 isofo...
ACSL5                 0.008   acyl-CoA synthetase long-chain family member 5 isofo...
FBLN5                 0.008   fibulin 5 precursor 
AIRE                  0.005   autoimmune regulator isoform 2 
UXS1                  0.005   UDP-glucuronate decarboxylase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press