Guide to the Human Genome
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Name: GALE Sequence: fasta or formatted (348aa) NCBI GI: 189083684
Description:

UDP-galactose-4-epimerase

Referenced in:

Galactose and Lactose
N-Acetyl Sugars and Hyaluronan

Other entries for this name:
alt mRNA [348aa] UDP-galactose-4-epimerase
alt mRNA [348aa] UDP-galactose-4-epimerase
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         30           2
 C cysteine            2.0          7           1
 D aspartate           4.6         16           1
 E glutamate           6.3         22           2
 F phenylalanine       3.4         12           2
 G glycine            10.6         37           3
 H histidine           2.3          8           1
 I isoleucine          4.3         15           1
 K lysine              5.2         18           2
 L leucine             9.8         34           2
 M methionine          2.6          9           1
 N asparagine          4.3         15           2
 P proline             4.0         14           1
 Q glutamine           4.6         16           1
 R arginine            4.9         17           2
 S serine              4.6         16           3
 T threonine           4.6         16           1
 V valine              7.5         26           2
 W tryptophan          1.1          4           1
 Y tyrosine            4.6         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-galactose-4-epimerase 
GALE                  1.000   UDP-galactose-4-epimerase 
GALE                  1.000   UDP-galactose-4-epimerase 
TGDS                  0.087   TDP-glucose 4,6-dehydratase 
UXS1                  0.073   UDP-glucuronate decarboxylase 1 
LOC100288072          0.032   PREDICTED: hypothetical protein XP_002343493 
SDR42E1               0.032   short chain dehydrogenase/reductase family 42E, mem...
GMDS                  0.032   GDP-mannose 4,6-dehydratase 
LOC100292512          0.029   PREDICTED: similar to Putative 3-beta-HSD family pr...
LOC100291543          0.029   PREDICTED: hypothetical protein XP_002347673 
NSDHL                 0.029   NAD(P) dependent steroid dehydrogenase-like 
NSDHL                 0.029   NAD(P) dependent steroid dehydrogenase-like 
HSD3B7                0.023   hydroxy-delta-5-steroid dehydrogenase, 3 beta- and s...
HSD3B7                0.023   hydroxy-delta-5-steroid dehydrogenase, 3 beta- and ...
HSD3B7                0.023   hydroxy-delta-5-steroid dehydrogenase, 3 beta- and ...
HSD3B2                0.022   3 beta-hydroxysteroid dehydrogenase 2 
TSTA3                 0.022   tissue specific transplantation antigen P35B 
HSD3B1                0.017   3 beta-hydroxysteroid dehydrogenase 1 
MAT2B                 0.010   methionine adenosyltransferase II, beta isoform 2 [H...
MAT2B                 0.010   methionine adenosyltransferase II, beta isoform 1 [H...
BLVRB                 0.009   biliverdin reductase B (flavin reductase (NADPH)) [Ho...
HSD17B4               0.007   hydroxysteroid (17-beta) dehydrogenase 4 
SBK1                  0.006   SH3-binding kinase 1 
PKHD1                 0.004   fibrocystin isoform 2 
PKHD1                 0.004   fibrocystin isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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