BBS12 27334

Name: BBS12	Sequence: fasta or formatted (710aa)		NCBI GI: 40217788
Description: Bardet-Biedl syndrome 12		Referenced in: Planar Cell Polarity
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 38 2 C cysteine 3.1 22 2 D aspartate 3.8 27 1 E glutamate 6.5 46 2 F phenylalanine 3.8 27 1 G glycine 4.9 35 3 H histidine 3.0 21 2 I isoleucine 5.5 39 2 K lysine 4.2 30 2 L leucine 12.0 85 2 M methionine 1.4 10 1 N asparagine 5.9 42 2 P proline 2.8 20 1 Q glutamine 4.9 35 2 R arginine 3.9 28 2 S serine 9.9 70 2 T threonine 6.5 46 1 V valine 8.9 63 2 W tryptophan 1.1 8 1 Y tyrosine 2.5 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Bardet-Biedl syndrome 12 CCT8 0.009 chaperonin containing TCP1, subunit 8 (theta) CCT3 0.007 chaperonin containing TCP1, subunit 3 isoform b [Hom... CCT3 0.007 chaperonin containing TCP1, subunit 3 isoform c [Hom... CCT3 0.007 chaperonin containing TCP1, subunit 3 isoform a [Hom... ORC6L 0.005 origin recognition complex subunit 6 CCT7 0.005 chaperonin containing TCP1, subunit 7 isoform a [Homo... UNC13A 0.004 unc-13 homolog A FIP1L1 0.004 FIP1 like 1 isoform 2 FIP1L1 0.004 FIP1 like 1 isoform 1 FBN3 0.004 fibrillin 3 precursor TRPC7 0.004 transient receptor potential cation channel, subfamil... ND1 0.004 NADH dehydrogenase subunit 1 ND1 0.004 NADH dehydrogenase subunit 1 PTPDC1 0.004 protein tyrosine phosphatase domain containing 1 pro... PTPDC1 0.004 protein tyrosine phosphatase domain containing 1 pro... MYO15A 0.004 myosin XV Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.