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Search of human proteins with 218563684
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|218563684 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7 isoform b [Homo sapiens]
(196 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|218563686 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and ... 409 e-115
gi|218563684 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and ... 409 e-115
gi|19923621 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and s... 365 e-101
gi|4504507 3 beta-hydroxysteroid dehydrogenase 1 [Homo sapiens] 125 3e-29
gi|4504509 3 beta-hydroxysteroid dehydrogenase 2 [Homo sapiens] 119 2e-27
gi|116268111 short chain dehydrogenase/reductase family 42E, mem... 69 3e-12
gi|193211614 NAD(P) dependent steroid dehydrogenase-like [Homo s... 65 3e-11
gi|8393516 NAD(P) dependent steroid dehydrogenase-like [Homo sap... 65 3e-11
gi|239745448 PREDICTED: hypothetical protein XP_002343493 [Homo ... 60 1e-09
gi|239756515 PREDICTED: similar to Putative 3-beta-HSD family pr... 60 2e-09
gi|239751020 PREDICTED: hypothetical protein XP_002347673 [Homo ... 60 2e-09
gi|7657641 TDP-glucose 4,6-dehydratase [Homo sapiens] 48 6e-06
gi|56118217 UDP-galactose-4-epimerase [Homo sapiens] 41 7e-04
gi|56237023 UDP-galactose-4-epimerase [Homo sapiens] 41 7e-04
gi|189083684 UDP-galactose-4-epimerase [Homo sapiens] 41 7e-04
gi|4502419 biliverdin reductase B (flavin reductase (NADPH)) [Ho... 32 0.45
gi|98986461 neurogenic differentiation 2 [Homo sapiens] 30 1.7
gi|239747656 PREDICTED: similar to mCG116201 [Homo sapiens] 29 2.2
gi|164419758 bromodomain containing 2 [Homo sapiens] 29 2.2
gi|4826806 bromodomain containing 2 [Homo sapiens] 29 2.2
gi|19913369 transducin beta-like 3 [Homo sapiens] 29 2.2
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 28 3.8
gi|40217788 Bardet-Biedl syndrome 12 [Homo sapiens] 28 5.0
gi|24233572 zinc finger protein 367 [Homo sapiens] 28 5.0
gi|42794760 acyl-CoA synthetase long-chain family member 5 isofo... 28 6.5
gi|42794758 acyl-CoA synthetase long-chain family member 5 isofo... 28 6.5
gi|42794756 acyl-CoA synthetase long-chain family member 5 isofo... 28 6.5
gi|19743803 fibulin 5 precursor [Homo sapiens] 28 6.5
gi|4557293 autoimmune regulator isoform 2 [Homo sapiens] 27 8.5
gi|42516563 UDP-glucuronate decarboxylase 1 [Homo sapiens] 27 8.5
>gi|218563686 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7 isoform b [Homo sapiens]
Length = 196
Score = 409 bits (1051), Expect = e-115
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV 60
MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV
Sbjct: 1 MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV 60
Query: 61 TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG
Sbjct: 61 TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
Query: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKAML 180
TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKAML
Sbjct: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKAML 180
Query: 181 PGCTCWQPGSWSSGQP 196
PGCTCWQPGSWSSGQP
Sbjct: 181 PGCTCWQPGSWSSGQP 196
>gi|218563684 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7 isoform b [Homo sapiens]
Length = 196
Score = 409 bits (1051), Expect = e-115
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV 60
MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV
Sbjct: 1 MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV 60
Query: 61 TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG
Sbjct: 61 TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
Query: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKAML 180
TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKAML
Sbjct: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKAML 180
Query: 181 PGCTCWQPGSWSSGQP 196
PGCTCWQPGSWSSGQP
Sbjct: 181 PGCTCWQPGSWSSGQP 196
>gi|19923621 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7 isoform a [Homo sapiens]
Length = 369
Score = 365 bits (938), Expect = e-101
Identities = 181/187 (96%), Positives = 181/187 (96%), Gaps = 2/187 (1%)
Query: 1 MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV 60
MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV
Sbjct: 1 MADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRV 60
Query: 61 TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG
Sbjct: 61 TAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
Query: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKAM- 179
TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRK
Sbjct: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANGRKVRG 180
Query: 180 -LPGCTC 185
LP TC
Sbjct: 181 GLPLVTC 187
>gi|4504507 3 beta-hydroxysteroid dehydrogenase 1 [Homo sapiens]
Length = 373
Score = 125 bits (313), Expect = 3e-29
Identities = 70/166 (42%), Positives = 99/166 (59%), Gaps = 4/166 (2%)
Query: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT---GPVRVTAIQGDVTQ 69
LVTG GFLG+ ++R+L+ +E L E+RV D+ GP L E + ++T ++GD+
Sbjct: 7 LVTGAGGFLGQRIIRLLV-KEKELKEIRVLDKAFGPELREEFSKLQNKTKLTVLEGDILD 65
Query: 70 AHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTGTRFLVYTSS 129
+ A V+IHTA ++DVFG ++I VNV+GT+ ++EACVQ +YTSS
Sbjct: 66 EPFLKRACQDVSVIIHTACIIDVFGVTHRESIMNVNVKGTQLLLEACVQASVPVFIYTSS 125
Query: 130 MEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANG 175
+EV GPN+ G+E+ P E PYP SK LAE VL ANG
Sbjct: 126 IEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANG 171
>gi|4504509 3 beta-hydroxysteroid dehydrogenase 2 [Homo sapiens]
Length = 372
Score = 119 bits (297), Expect = 2e-27
Identities = 69/166 (41%), Positives = 96/166 (57%), Gaps = 4/166 (2%)
Query: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT---GPVRVTAIQGDVTQ 69
LVTG G LG+ +VR+L++ E L E+R D+ P L E + ++T ++GD+
Sbjct: 6 LVTGAGGLLGQRIVRLLVE-EKELKEIRALDKAFRPELREEFSKLQNRTKLTVLEGDILD 64
Query: 70 AHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTGTRFLVYTSS 129
+ A VVIHTA ++DVFG ++I VNV+GT+ ++EACVQ +YTSS
Sbjct: 65 EPFLKRACQDVSVVIHTACIIDVFGVTHRESIMNVNVKGTQLLLEACVQASVPVFIYTSS 124
Query: 130 MEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEANG 175
+EV GPN+ G+E+ P E PYP SK LAE VL ANG
Sbjct: 125 IEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANG 170
>gi|116268111 short chain dehydrogenase/reductase family 42E, member
1 [Homo sapiens]
Length = 393
Score = 68.9 bits (167), Expect = 3e-12
Identities = 60/178 (33%), Positives = 85/178 (47%), Gaps = 18/178 (10%)
Query: 3 DSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVTA 62
D ++QK L+TGG G+ G + L Q + +FD +T P +
Sbjct: 2 DPKRSQKESVLITGGSGYFGFRLGCALNQNGVHV---ILFDIS-----SPAQTIPEGIKF 53
Query: 63 IQGDVTQAHEVAAAVAGAHV--VIHTAGLVDVFGRA--SPKTIHEVNVQGTRNVIEACVQ 118
IQGD+ +V A A V V H A + GR + I EVNV+GT N+++ C +
Sbjct: 54 IQGDIRHLSDVEKAFQDADVTCVFHIASY-GMSGREQLNRNLIKEVNVRGTDNILQVCQR 112
Query: 119 TGTRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHP--YPCSKALAEWLVLEAN 174
LVYTS+ V+ G G+E PY +H HP Y +K++AE VLEAN
Sbjct: 113 RRVPRLVYTSTFNVI---FGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEAN 167
>gi|193211614 NAD(P) dependent steroid dehydrogenase-like [Homo
sapiens]
Length = 373
Score = 65.5 bits (158), Expect = 3e-11
Identities = 53/161 (32%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 14 VTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVTAIQGDVTQAHEV 73
V GG GFLG+H+V LL R + VFD G +V GD+ ++
Sbjct: 42 VIGGSGFLGQHMVEQLLARGYAVN---VFDIQQG-------FDNPQVRFFLGDLCSRQDL 91
Query: 74 AAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTGTRFLVYTSSMEVV 133
A+ G + V H A + + + VN GT+NVIE C + G + L+ TSS V+
Sbjct: 92 YPALKGVNTVFHCASPPP--SSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVI 149
Query: 134 GPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEAN 174
+G G ED PY Y +K L E VL AN
Sbjct: 150 ---FEGVDIKNGTEDLPYAMKPIDYYTETKILQERAVLGAN 187
>gi|8393516 NAD(P) dependent steroid dehydrogenase-like [Homo
sapiens]
Length = 373
Score = 65.5 bits (158), Expect = 3e-11
Identities = 53/161 (32%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 14 VTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVTAIQGDVTQAHEV 73
V GG GFLG+H+V LL R + VFD G +V GD+ ++
Sbjct: 42 VIGGSGFLGQHMVEQLLARGYAVN---VFDIQQG-------FDNPQVRFFLGDLCSRQDL 91
Query: 74 AAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTGTRFLVYTSSMEVV 133
A+ G + V H A + + + VN GT+NVIE C + G + L+ TSS V+
Sbjct: 92 YPALKGVNTVFHCASPPP--SSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVI 149
Query: 134 GPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLVLEAN 174
+G G ED PY Y +K L E VL AN
Sbjct: 150 ---FEGVDIKNGTEDLPYAMKPIDYYTETKILQERAVLGAN 187
>gi|239745448 PREDICTED: hypothetical protein XP_002343493 [Homo
sapiens]
Length = 422
Score = 60.1 bits (144), Expect = 1e-09
Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 17/185 (9%)
Query: 2 ADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVT 61
A +A + LVTGG G+LG + L + + + D+ W +T
Sbjct: 26 AKPTKAARQKVLVTGGGGYLGFSLGSHLAKSGT---SVILLDRRRPQWELSPET-----K 77
Query: 62 AIQGDVTQAHEVAAAVAGAHVVIHTAGL-VDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
IQ DV + A G V H A + + + I +NV GT+ VI+ CV+
Sbjct: 78 FIQADVRDEEALYRAFEGVDCVFHVASYGMSGAEKLQKEQIESINVGGTKLVIDVCVRRR 137
Query: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDT-PYEAVHRH--PYPCSKALAEWLVLEANGRK 177
L+YTS++ V G P +G+ED+ PY + H Y +KA+A+ L L ANG
Sbjct: 138 VPRLIYTSTVNVA---FGGKPIEQGDEDSVPYFPLDEHVDHYSRTKAIADQLTLMANGMP 194
Query: 178 AMLPG 182
LPG
Sbjct: 195 --LPG 197
>gi|239756515 PREDICTED: similar to Putative 3-beta-HSD family
protein ENSP00000330812 [Homo sapiens]
Length = 422
Score = 59.7 bits (143), Expect = 2e-09
Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 17/185 (9%)
Query: 2 ADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVT 61
A +A + LVTGG G+LG + L + + + D+ W +T
Sbjct: 26 AKPTKAARQKVLVTGGGGYLGFSLGSHLAKSGT---SVILLDRRRPQWELSPET-----K 77
Query: 62 AIQGDVTQAHEVAAAVAGAHVVIHTAGL-VDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
IQ DV + A G V H A + + + I +NV GT+ VI+ CV+
Sbjct: 78 FIQADVRDEEALYHAFEGVDCVFHVASYGMSGAEKLQKEQIESINVGGTKLVIDVCVRRR 137
Query: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDT-PYEAVHRH--PYPCSKALAEWLVLEANGRK 177
L+YTS++ V G P +G+ED+ PY + H Y +KA+A+ L L ANG
Sbjct: 138 VPRLIYTSTVNVA---FGGKPIEQGDEDSVPYFPLDEHVDHYSRTKAIADQLTLMANGMP 194
Query: 178 AMLPG 182
LPG
Sbjct: 195 --LPG 197
>gi|239751020 PREDICTED: hypothetical protein XP_002347673 [Homo
sapiens]
Length = 422
Score = 59.7 bits (143), Expect = 2e-09
Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 17/185 (9%)
Query: 2 ADSAQAQKLVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVRVT 61
A +A + LVTGG G+LG + L + + + D+ W +T
Sbjct: 26 AKPTKAARQKVLVTGGGGYLGFSLGSHLAKSGT---SVILLDRRRPQWELSPET-----K 77
Query: 62 AIQGDVTQAHEVAAAVAGAHVVIHTAGL-VDVFGRASPKTIHEVNVQGTRNVIEACVQTG 120
IQ DV + A G V H A + + + I +NV GT+ VI+ CV+
Sbjct: 78 FIQADVRDEEALYHAFEGVDCVFHVASYGMSGAEKLQKEQIESINVGGTKLVIDVCVRRR 137
Query: 121 TRFLVYTSSMEVVGPNTKGHPFYRGNEDT-PYEAVHRH--PYPCSKALAEWLVLEANGRK 177
L+YTS++ V G P +G+ED+ PY + H Y +KA+A+ L L ANG
Sbjct: 138 VPRLIYTSTVNVA---FGGKPIEQGDEDSVPYFPLDEHVDHYSRTKAIADQLTLMANGMP 194
Query: 178 AMLPG 182
LPG
Sbjct: 195 --LPG 197
>gi|7657641 TDP-glucose 4,6-dehydratase [Homo sapiens]
Length = 350
Score = 47.8 bits (112), Expect = 6e-06
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 15/165 (9%)
Query: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT--GPVRVTAIQGDVTQA 70
LVTGG GF+ H++ L++ P + + L+ L+T IQGD+ +
Sbjct: 21 LVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDICDS 80
Query: 71 H--EVAAAVAGAHVVIHTAGLVDV---FGRASPKTIHEVNVQGTRNVIEACVQTGTRFLV 125
H ++ +V+H A V F RA T VNV GT ++ A + +
Sbjct: 81 HFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTY--VNVYGTHVLVSAAHEARVEKFI 138
Query: 126 YTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCSKALAEWLV 170
Y S+ EV G G +E +P + +PY SKA AE V
Sbjct: 139 YVSTDEVYG----GSLDKEFDESSPKQPT--NPYASSKAAAECFV 177
>gi|56118217 UDP-galactose-4-epimerase [Homo sapiens]
Length = 348
Score = 40.8 bits (94), Expect = 7e-04
Identities = 50/163 (30%), Positives = 67/163 (41%), Gaps = 35/163 (21%)
Query: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHL-------GPWLEELKTGPVRVTAIQG 65
LVTGG G++G H V LL+ G L V + G E L+ RV + G
Sbjct: 6 LVTGGAGYIGSHTVLELLE----AGYLPVVIDNFHNAFRGGGSLPESLR----RVQELTG 57
Query: 66 DVTQAHEVAAAVAGA----------HVVIHTAGLVDVFGRA--SPKTIHEVNVQGTRNVI 113
+ E+ GA VIH AGL V G + P + VN+ GT ++
Sbjct: 58 RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAV-GESVQKPLDYYRVNLTGTIQLL 116
Query: 114 EACVQTGTRFLVYTSSMEVVG-----PNTKGHPFYRGNEDTPY 151
E G + LV++SS V G P + HP G PY
Sbjct: 117 EIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHP--TGGCTNPY 157
>gi|56237023 UDP-galactose-4-epimerase [Homo sapiens]
Length = 348
Score = 40.8 bits (94), Expect = 7e-04
Identities = 50/163 (30%), Positives = 67/163 (41%), Gaps = 35/163 (21%)
Query: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHL-------GPWLEELKTGPVRVTAIQG 65
LVTGG G++G H V LL+ G L V + G E L+ RV + G
Sbjct: 6 LVTGGAGYIGSHTVLELLE----AGYLPVVIDNFHNAFRGGGSLPESLR----RVQELTG 57
Query: 66 DVTQAHEVAAAVAGA----------HVVIHTAGLVDVFGRA--SPKTIHEVNVQGTRNVI 113
+ E+ GA VIH AGL V G + P + VN+ GT ++
Sbjct: 58 RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAV-GESVQKPLDYYRVNLTGTIQLL 116
Query: 114 EACVQTGTRFLVYTSSMEVVG-----PNTKGHPFYRGNEDTPY 151
E G + LV++SS V G P + HP G PY
Sbjct: 117 EIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHP--TGGCTNPY 157
>gi|189083684 UDP-galactose-4-epimerase [Homo sapiens]
Length = 348
Score = 40.8 bits (94), Expect = 7e-04
Identities = 50/163 (30%), Positives = 67/163 (41%), Gaps = 35/163 (21%)
Query: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHL-------GPWLEELKTGPVRVTAIQG 65
LVTGG G++G H V LL+ G L V + G E L+ RV + G
Sbjct: 6 LVTGGAGYIGSHTVLELLE----AGYLPVVIDNFHNAFRGGGSLPESLR----RVQELTG 57
Query: 66 DVTQAHEVAAAVAGA----------HVVIHTAGLVDVFGRA--SPKTIHEVNVQGTRNVI 113
+ E+ GA VIH AGL V G + P + VN+ GT ++
Sbjct: 58 RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAV-GESVQKPLDYYRVNLTGTIQLL 116
Query: 114 EACVQTGTRFLVYTSSMEVVG-----PNTKGHPFYRGNEDTPY 151
E G + LV++SS V G P + HP G PY
Sbjct: 117 EIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHP--TGGCTNPY 157
>gi|4502419 biliverdin reductase B (flavin reductase (NADPH)) [Homo
sapiens]
Length = 206
Score = 31.6 bits (70), Expect = 0.45
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 56 GPVRVTAIQGDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEA 115
GP + GDV QA +V VAG VI L+ SP T+ +G RN++ A
Sbjct: 44 GPRPAHVVVGDVLQAADVDKTVAGQDAVI---VLLGTRNDLSPTTVMS---EGARNIVAA 97
Query: 116 CVQTGTRFLVYTSSMEVVGPNTKGHP 141
G +V +S ++ TK P
Sbjct: 98 MKAHGVDKVVACTSAFLLWDPTKVPP 123
>gi|98986461 neurogenic differentiation 2 [Homo sapiens]
Length = 382
Score = 29.6 bits (65), Expect = 1.7
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 107 QGTRNVIEACVQTGTRFLVYTSSMEVVGP-NTKGHPFYRGNEDTPYEAVHRHPYPCSK 163
Q T N++ C+Q +R + + G + G PF A+H +PYPCS+
Sbjct: 198 QPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPF----------AMHPYPYPCSR 245
>gi|239747656 PREDICTED: similar to mCG116201 [Homo sapiens]
Length = 591
Score = 29.3 bits (64), Expect = 2.2
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 23 EHVVRMLLQREPRLGELRV-FDQHLGPWLEELKTGP 57
EH +R LL R + G LR+ DQ LG ++E LK+ P
Sbjct: 119 EHQIRDLLSRTKKPGGLRIRGDQQLGFYVEGLKSVP 154
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 29.3 bits (64), Expect = 2.2
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 59 RVTAIQGDVTQAHEVAAAVAGAHVVIHT 86
++ A+QG VT AH+V A + +H ++T
Sbjct: 201 KLAALQGSVTSAHQVPAVSSVSHTALYT 228
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 29.3 bits (64), Expect = 2.2
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 59 RVTAIQGDVTQAHEVAAAVAGAHVVIHT 86
++ A+QG VT AH+V A + +H ++T
Sbjct: 201 KLAALQGSVTSAHQVPAVSSVSHTALYT 228
>gi|19913369 transducin beta-like 3 [Homo sapiens]
Length = 808
Score = 29.3 bits (64), Expect = 2.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 149 TPYEAVHRHPYPCSKALAEWLVLEANGRKAMLPGCTCWQPGS 190
T +A+ R P C K A L L + ++A+L C W S
Sbjct: 684 TVIQAIRRDPEACEKLEATMLRLRRDQKEALLRFCVTWNTNS 725
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 28.5 bits (62), Expect = 3.8
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 146 NEDTPYEAVHRHPYPCSKALA---EWLVLEANGRKAMLPGCTCWQPGSWSSGQP 196
NED EA RHP PC K+ A + A + A LP + WS P
Sbjct: 702 NEDAAGEAERRHPPPCHKSPALKLPGMTTGATTQTATLPDGQTDRARPWSPPAP 755
>gi|40217788 Bardet-Biedl syndrome 12 [Homo sapiens]
Length = 710
Score = 28.1 bits (61), Expect = 5.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 37 GELRVFDQHLGPWLEELKTGPVRVTAIQGDVTQ 69
G + V P ++EL+ PVR+ I+GD+T+
Sbjct: 333 GYITVVSVSNNPVIKELQNQPVRIVLIEGDLTE 365
>gi|24233572 zinc finger protein 367 [Homo sapiens]
Length = 350
Score = 28.1 bits (61), Expect = 5.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 140 HPFYRGNEDTPYEAVHRHPYPCSKALAEWL 169
HP+ R + P + + +H +KA AEWL
Sbjct: 246 HPYARLKREEPTDTLSKHQAADNKAAAEWL 275
>gi|42794760 acyl-CoA synthetase long-chain family member 5 isoform
b [Homo sapiens]
Length = 683
Score = 27.7 bits (60), Expect = 6.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 170 VLEANGRKAMLPGCTCWQPGSWSSG 194
V EA G+ GCT PG W+SG
Sbjct: 439 VYEAYGQTECTGGCTFTLPGDWTSG 463
>gi|42794758 acyl-CoA synthetase long-chain family member 5 isoform
b [Homo sapiens]
Length = 683
Score = 27.7 bits (60), Expect = 6.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 170 VLEANGRKAMLPGCTCWQPGSWSSG 194
V EA G+ GCT PG W+SG
Sbjct: 439 VYEAYGQTECTGGCTFTLPGDWTSG 463
>gi|42794756 acyl-CoA synthetase long-chain family member 5 isoform
a [Homo sapiens]
Length = 739
Score = 27.7 bits (60), Expect = 6.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 170 VLEANGRKAMLPGCTCWQPGSWSSG 194
V EA G+ GCT PG W+SG
Sbjct: 495 VYEAYGQTECTGGCTFTLPGDWTSG 519
>gi|19743803 fibulin 5 precursor [Homo sapiens]
Length = 448
Score = 27.7 bits (60), Expect = 6.5
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 104 VNVQGTRNVIEACVQTGTRFLVYTSSMEVVGPNTKGHPFYRGNEDTPYEAVHRHPYPCS 162
+++ R + EAC G V + + P T +P YRG PY + PYP +
Sbjct: 41 LDIDECRTIPEAC--RGDMMCVNQNGGYLCIPRT--NPVYRGPYSNPYSTPYSGPYPAA 95
>gi|4557293 autoimmune regulator isoform 2 [Homo sapiens]
Length = 348
Score = 27.3 bits (59), Expect = 8.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 179 MLPGCTCWQPGSWSSG 194
M PG CW+P W +G
Sbjct: 26 MAPGGVCWRPDGWGTG 41
>gi|42516563 UDP-glucuronate decarboxylase 1 [Homo sapiens]
Length = 420
Score = 27.3 bits (59), Expect = 8.5
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 23/137 (16%)
Query: 13 LVTGGCGFLGEHVVRMLLQREPRL--------GELRVFDQHLGPWLEELKTGPVRVTAIQ 64
L+TGG GF+G H+ L+ + G R + +G EL V V +
Sbjct: 92 LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV-VEPLY 150
Query: 65 GDVTQAHEVAAAVAGAHVVIHTAGLVDVFGRASPKTIHEVNVQGTRNVIEACVQTGTRFL 124
+V Q + +A+ + + + +P + N GT N++ + G R L
Sbjct: 151 IEVDQIYHLASPASPPNYMY------------NPIKTLKTNTIGTLNMLGLAKRVGARLL 198
Query: 125 VYTSSMEVVGPNTKGHP 141
+ S+ EV G + + HP
Sbjct: 199 L-ASTSEVYG-DPEVHP 213
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,235,821
Number of Sequences: 37866
Number of extensions: 354771
Number of successful extensions: 723
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 678
Number of HSP's gapped (non-prelim): 30
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.