Guide to the Human Genome
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Search of human proteins with 218156275

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|218156275 hypothetical protein LOC374393 isoform b [Homo
sapiens]
         (704 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|218156275 hypothetical protein LOC374393 isoform b [Homo sapi...  1461   0.0  
gi|218156273 hypothetical protein LOC374393 isoform b [Homo sapi...  1461   0.0  
gi|39573718 hypothetical protein LOC374393 isoform a [Homo sapiens]  1461   0.0  
gi|215983098 hypothetical protein LOC63901 [Homo sapiens]             261   2e-69
gi|215983096 hypothetical protein LOC63901 [Homo sapiens]             261   2e-69
gi|215983094 hypothetical protein LOC63901 [Homo sapiens]             261   2e-69
gi|38505211 hypothetical protein LOC63901 [Homo sapiens]              261   2e-69
gi|38505209 hypothetical protein LOC63901 [Homo sapiens]              261   2e-69
gi|196114999 special AT-rich sequence binding protein 1 [Homo sa...    39   0.016
gi|4506791 special AT-rich sequence binding protein 1 [Homo sapi...    39   0.016
gi|102467235 inner centromere protein antigens 135/155kDa isofor...    38   0.028
gi|102467242 inner centromere protein antigens 135/155kDa isofor...    38   0.028
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    37   0.063
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof...    37   0.063
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1...    36   0.11 
gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transfera...    36   0.14 
gi|188219599 N-myc and STAT interactor [Homo sapiens]                  36   0.14 
gi|148746195 trichohyalin [Homo sapiens]                               35   0.31 
gi|71061468 centromere protein E [Homo sapiens]                        35   0.31 
gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo sa...    35   0.31 
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap...    34   0.41 
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap...    34   0.41 
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]        34   0.41 
gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]                     33   0.69 
gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]                     33   0.69 
gi|219803769 trichoplein [Homo sapiens]                                33   0.90 
gi|14150056 trichoplein [Homo sapiens]                                 33   0.90 
gi|116014339 olfactomedin-like 2A [Homo sapiens]                       33   0.90 
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo...    33   1.2  
gi|110815815 centlein isoform 1 [Homo sapiens]                         33   1.2  

>gi|218156275 hypothetical protein LOC374393 isoform b [Homo
           sapiens]
          Length = 704

 Score = 1461 bits (3782), Expect = 0.0
 Identities = 704/704 (100%), Positives = 704/704 (100%)

Query: 1   MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 60
           MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR
Sbjct: 1   MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 60

Query: 61  KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 120
           KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL
Sbjct: 61  KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 120

Query: 121 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 180
           PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK
Sbjct: 121 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 180

Query: 181 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 240
           LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK
Sbjct: 181 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 240

Query: 241 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 300
           KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL
Sbjct: 241 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 300

Query: 301 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 360
           SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN
Sbjct: 301 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 360

Query: 361 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 420
           YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT
Sbjct: 361 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 420

Query: 421 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 480
           CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS
Sbjct: 421 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 480

Query: 481 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 540
           KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS
Sbjct: 481 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 540

Query: 541 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 600
           TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL
Sbjct: 541 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 600

Query: 601 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 660
           SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI
Sbjct: 601 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 660

Query: 661 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 704
           LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC
Sbjct: 661 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 704


>gi|218156273 hypothetical protein LOC374393 isoform b [Homo
           sapiens]
          Length = 704

 Score = 1461 bits (3782), Expect = 0.0
 Identities = 704/704 (100%), Positives = 704/704 (100%)

Query: 1   MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 60
           MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR
Sbjct: 1   MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 60

Query: 61  KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 120
           KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL
Sbjct: 61  KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 120

Query: 121 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 180
           PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK
Sbjct: 121 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 180

Query: 181 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 240
           LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK
Sbjct: 181 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 240

Query: 241 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 300
           KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL
Sbjct: 241 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 300

Query: 301 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 360
           SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN
Sbjct: 301 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 360

Query: 361 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 420
           YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT
Sbjct: 361 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 420

Query: 421 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 480
           CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS
Sbjct: 421 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 480

Query: 481 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 540
           KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS
Sbjct: 481 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 540

Query: 541 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 600
           TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL
Sbjct: 541 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 600

Query: 601 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 660
           SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI
Sbjct: 601 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 660

Query: 661 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 704
           LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC
Sbjct: 661 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 704


>gi|39573718 hypothetical protein LOC374393 isoform a [Homo sapiens]
          Length = 734

 Score = 1461 bits (3782), Expect = 0.0
 Identities = 704/704 (100%), Positives = 704/704 (100%)

Query: 1   MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 60
           MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR
Sbjct: 31  MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 90

Query: 61  KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 120
           KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL
Sbjct: 91  KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 150

Query: 121 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 180
           PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK
Sbjct: 151 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 210

Query: 181 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 240
           LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK
Sbjct: 211 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 270

Query: 241 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 300
           KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL
Sbjct: 271 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 330

Query: 301 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 360
           SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN
Sbjct: 331 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 390

Query: 361 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 420
           YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT
Sbjct: 391 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 450

Query: 421 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 480
           CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS
Sbjct: 451 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 510

Query: 481 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 540
           KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS
Sbjct: 511 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 570

Query: 541 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 600
           TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL
Sbjct: 571 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 630

Query: 601 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 660
           SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI
Sbjct: 631 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 690

Query: 661 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 704
           LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC
Sbjct: 691 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 734


>gi|215983098 hypothetical protein LOC63901 [Homo sapiens]
          Length = 611

 Score =  261 bits (666), Expect = 2e-69
 Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)

Query: 359 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 418
           +N   L E I+ QYP+ K E++ + + F+++ K  N      F +++  FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344

Query: 419 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 478
              + L   S SVG++ WD+   TG ATCFVF G +I TCRHV+  +VG    PS W  I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403

Query: 479 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 538
           I +C +VTF Y E      N+F +EPW ++ NE LDYA+LKLKENG   P  L+  I+P 
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463

Query: 539 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 598
           P +GLI++IGHP G+ K+ID C VIP  +R KK    CQ+ +      +     M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519

Query: 599 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 658
           F   V N   ++YDT F  G+SGSPVF++ G LVA+H  G  Y       ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579

Query: 659 SILCDIKKTNESLYKS--LNDEKLETYDEE 686
           SIL DIK+ ++  Y+   +N + +E   +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609



 Score =  137 bits (344), Expect = 4e-32
 Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 3/191 (1%)

Query: 54  TLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINL 113
           TL  N R+            + S+Y AL+      + I+    + ++V   + I  +INL
Sbjct: 81  TLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQGQEMLVRGTEGIKEYINL 140

Query: 114 GMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECILF--HVVAIGRTRKKIVK 170
           GMPL C P      ITF Q KS  KED HI  + +  + EC+ F  H + IG+ +++IVK
Sbjct: 141 GMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVKFYIHAIGIGKCKRRIVK 200

Query: 171 INELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVS 230
             +LH+KG KLC+YA KGETI+ ALCKDGRF S +   +WKL E +  I      VDE+ 
Sbjct: 201 CGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLIENNDTILESTQPVDELE 260

Query: 231 GKVLEMDISKK 241
           G+  ++++ K+
Sbjct: 261 GRYFQVEVEKR 271


>gi|215983096 hypothetical protein LOC63901 [Homo sapiens]
          Length = 611

 Score =  261 bits (666), Expect = 2e-69
 Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)

Query: 359 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 418
           +N   L E I+ QYP+ K E++ + + F+++ K  N      F +++  FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344

Query: 419 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 478
              + L   S SVG++ WD+   TG ATCFVF G +I TCRHV+  +VG    PS W  I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403

Query: 479 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 538
           I +C +VTF Y E      N+F +EPW ++ NE LDYA+LKLKENG   P  L+  I+P 
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463

Query: 539 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 598
           P +GLI++IGHP G+ K+ID C VIP  +R KK    CQ+ +      +     M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519

Query: 599 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 658
           F   V N   ++YDT F  G+SGSPVF++ G LVA+H  G  Y       ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579

Query: 659 SILCDIKKTNESLYKS--LNDEKLETYDEE 686
           SIL DIK+ ++  Y+   +N + +E   +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609



 Score =  137 bits (344), Expect = 4e-32
 Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 3/191 (1%)

Query: 54  TLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINL 113
           TL  N R+            + S+Y AL+      + I+    + ++V   + I  +INL
Sbjct: 81  TLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQGQEMLVRGTEGIKEYINL 140

Query: 114 GMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECILF--HVVAIGRTRKKIVK 170
           GMPL C P      ITF Q KS  KED HI  + +  + EC+ F  H + IG+ +++IVK
Sbjct: 141 GMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVKFYIHAIGIGKCKRRIVK 200

Query: 171 INELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVS 230
             +LH+KG KLC+YA KGETI+ ALCKDGRF S +   +WKL E +  I      VDE+ 
Sbjct: 201 CGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLIENNDTILESTQPVDELE 260

Query: 231 GKVLEMDISKK 241
           G+  ++++ K+
Sbjct: 261 GRYFQVEVEKR 271


>gi|215983094 hypothetical protein LOC63901 [Homo sapiens]
          Length = 611

 Score =  261 bits (666), Expect = 2e-69
 Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)

Query: 359 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 418
           +N   L E I+ QYP+ K E++ + + F+++ K  N      F +++  FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344

Query: 419 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 478
              + L   S SVG++ WD+   TG ATCFVF G +I TCRHV+  +VG    PS W  I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403

Query: 479 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 538
           I +C +VTF Y E      N+F +EPW ++ NE LDYA+LKLKENG   P  L+  I+P 
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463

Query: 539 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 598
           P +GLI++IGHP G+ K+ID C VIP  +R KK    CQ+ +      +     M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519

Query: 599 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 658
           F   V N   ++YDT F  G+SGSPVF++ G LVA+H  G  Y       ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579

Query: 659 SILCDIKKTNESLYKS--LNDEKLETYDEE 686
           SIL DIK+ ++  Y+   +N + +E   +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609



 Score =  137 bits (344), Expect = 4e-32
 Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 3/191 (1%)

Query: 54  TLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINL 113
           TL  N R+            + S+Y AL+      + I+    + ++V   + I  +INL
Sbjct: 81  TLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQGQEMLVRGTEGIKEYINL 140

Query: 114 GMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECILF--HVVAIGRTRKKIVK 170
           GMPL C P      ITF Q KS  KED HI  + +  + EC+ F  H + IG+ +++IVK
Sbjct: 141 GMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVKFYIHAIGIGKCKRRIVK 200

Query: 171 INELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVS 230
             +LH+KG KLC+YA KGETI+ ALCKDGRF S +   +WKL E +  I      VDE+ 
Sbjct: 201 CGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLIENNDTILESTQPVDELE 260

Query: 231 GKVLEMDISKK 241
           G+  ++++ K+
Sbjct: 261 GRYFQVEVEKR 271


>gi|38505211 hypothetical protein LOC63901 [Homo sapiens]
          Length = 611

 Score =  261 bits (666), Expect = 2e-69
 Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)

Query: 359 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 418
           +N   L E I+ QYP+ K E++ + + F+++ K  N      F +++  FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344

Query: 419 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 478
              + L   S SVG++ WD+   TG ATCFVF G +I TCRHV+  +VG    PS W  I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403

Query: 479 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 538
           I +C +VTF Y E      N+F +EPW ++ NE LDYA+LKLKENG   P  L+  I+P 
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463

Query: 539 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 598
           P +GLI++IGHP G+ K+ID C VIP  +R KK    CQ+ +      +     M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519

Query: 599 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 658
           F   V N   ++YDT F  G+SGSPVF++ G LVA+H  G  Y       ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579

Query: 659 SILCDIKKTNESLYKS--LNDEKLETYDEE 686
           SIL DIK+ ++  Y+   +N + +E   +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609



 Score =  137 bits (344), Expect = 4e-32
 Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 3/191 (1%)

Query: 54  TLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINL 113
           TL  N R+            + S+Y AL+      + I+    + ++V   + I  +INL
Sbjct: 81  TLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQGQEMLVRGTEGIKEYINL 140

Query: 114 GMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECILF--HVVAIGRTRKKIVK 170
           GMPL C P      ITF Q KS  KED HI  + +  + EC+ F  H + IG+ +++IVK
Sbjct: 141 GMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVKFYIHAIGIGKCKRRIVK 200

Query: 171 INELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVS 230
             +LH+KG KLC+YA KGETI+ ALCKDGRF S +   +WKL E +  I      VDE+ 
Sbjct: 201 CGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLIENNDTILESTQPVDELE 260

Query: 231 GKVLEMDISKK 241
           G+  ++++ K+
Sbjct: 261 GRYFQVEVEKR 271


>gi|38505209 hypothetical protein LOC63901 [Homo sapiens]
          Length = 611

 Score =  261 bits (666), Expect = 2e-69
 Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)

Query: 359 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 418
           +N   L E I+ QYP+ K E++ + + F+++ K  N      F +++  FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344

Query: 419 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 478
              + L   S SVG++ WD+   TG ATCFVF G +I TCRHV+  +VG    PS W  I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403

Query: 479 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 538
           I +C +VTF Y E      N+F +EPW ++ NE LDYA+LKLKENG   P  L+  I+P 
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463

Query: 539 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 598
           P +GLI++IGHP G+ K+ID C VIP  +R KK    CQ+ +      +     M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519

Query: 599 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 658
           F   V N   ++YDT F  G+SGSPVF++ G LVA+H  G  Y       ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579

Query: 659 SILCDIKKTNESLYKS--LNDEKLETYDEE 686
           SIL DIK+ ++  Y+   +N + +E   +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609



 Score =  137 bits (344), Expect = 4e-32
 Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 3/191 (1%)

Query: 54  TLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINL 113
           TL  N R+            + S+Y AL+      + I+    + ++V   + I  +INL
Sbjct: 81  TLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQGQEMLVRGTEGIKEYINL 140

Query: 114 GMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECILF--HVVAIGRTRKKIVK 170
           GMPL C P      ITF Q KS  KED HI  + +  + EC+ F  H + IG+ +++IVK
Sbjct: 141 GMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVKFYIHAIGIGKCKRRIVK 200

Query: 171 INELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVS 230
             +LH+KG KLC+YA KGETI+ ALCKDGRF S +   +WKL E +  I      VDE+ 
Sbjct: 201 CGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLIENNDTILESTQPVDELE 260

Query: 231 GKVLEMDISKK 241
           G+  ++++ K+
Sbjct: 261 GRYFQVEVEKR 271


>gi|196114999 special AT-rich sequence binding protein 1 [Homo
           sapiens]
          Length = 763

 Score = 38.9 bits (89), Expect = 0.016
 Identities = 38/184 (20%), Positives = 79/184 (42%), Gaps = 13/184 (7%)

Query: 223 QSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDG 282
           QSM+  +       ++S  K  +    +K  K+ +    E++  S +  +   H     G
Sbjct: 213 QSMISSIVNSTYYANVSAAKCQEFGRWYKHFKKTKDMMVEMDSLSELSQQGANHV--NFG 270

Query: 283 ETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGR 342
           +     ++ EQ   P  LSH  +   R  +P +      S P   + +N Q+     L +
Sbjct: 271 QQPVPGNTAEQPPSPAQLSHGSQPSVRTPLPNLHPG-LVSTPISPQLVNQQLVMAQLLNQ 329

Query: 343 RYAINLDVQKEAINLLKNY--------QTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 394
           +YA+N  + ++++N  + Y        +++N+ +  Q     E +  + ++ R+E KR  
Sbjct: 330 QYAVNRLLAQQSLN--QQYLNHPPPVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAG 387

Query: 395 LSPA 398
           +S A
Sbjct: 388 ISQA 391


>gi|4506791 special AT-rich sequence binding protein 1 [Homo
           sapiens]
          Length = 763

 Score = 38.9 bits (89), Expect = 0.016
 Identities = 38/184 (20%), Positives = 79/184 (42%), Gaps = 13/184 (7%)

Query: 223 QSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDG 282
           QSM+  +       ++S  K  +    +K  K+ +    E++  S +  +   H     G
Sbjct: 213 QSMISSIVNSTYYANVSAAKCQEFGRWYKHFKKTKDMMVEMDSLSELSQQGANHV--NFG 270

Query: 283 ETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGR 342
           +     ++ EQ   P  LSH  +   R  +P +      S P   + +N Q+     L +
Sbjct: 271 QQPVPGNTAEQPPSPAQLSHGSQPSVRTPLPNLHPG-LVSTPISPQLVNQQLVMAQLLNQ 329

Query: 343 RYAINLDVQKEAINLLKNY--------QTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 394
           +YA+N  + ++++N  + Y        +++N+ +  Q     E +  + ++ R+E KR  
Sbjct: 330 QYAVNRLLAQQSLN--QQYLNHPPPVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAG 387

Query: 395 LSPA 398
           +S A
Sbjct: 388 ISQA 391


>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
           [Homo sapiens]
          Length = 918

 Score = 38.1 bits (87), Expect = 0.028
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 28/197 (14%)

Query: 213 KEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQ------KDIHKKIKQNESAT------ 260
           +E  K+I  K + +DE + K  E  ++++KA ++      +++  + KQ E A       
Sbjct: 593 EEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQ 652

Query: 261 ---DEINHQSLIQSKKKVHKP--KKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRI 315
              +E  HQ L+Q KK+  +   +K  E K +   REQ    Q+     + +  +     
Sbjct: 653 QEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQER 712

Query: 316 RNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNF 375
           R         + RQ+  Q RRR     +    L  +++A+ L K  Q   E  + +    
Sbjct: 713 R--------EQERQLAEQERRREQERLQAERELQEREKALRLQKE-QLQRE--LEEKKKK 761

Query: 376 KEEAQWVRKYFREEQKR 392
           +E+ +   +  +EEQ++
Sbjct: 762 EEQQRLAERQLQEEQEK 778


>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
           [Homo sapiens]
          Length = 914

 Score = 38.1 bits (87), Expect = 0.028
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 28/197 (14%)

Query: 213 KEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQ------KDIHKKIKQNESAT------ 260
           +E  K+I  K + +DE + K  E  ++++KA ++      +++  + KQ E A       
Sbjct: 589 EEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQ 648

Query: 261 ---DEINHQSLIQSKKKVHKP--KKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRI 315
              +E  HQ L+Q KK+  +   +K  E K +   REQ    Q+     + +  +     
Sbjct: 649 QEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQER 708

Query: 316 RNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNF 375
           R         + RQ+  Q RRR     +    L  +++A+ L K  Q   E  + +    
Sbjct: 709 R--------EQERQLAEQERRREQERLQAERELQEREKALRLQKE-QLQRE--LEEKKKK 757

Query: 376 KEEAQWVRKYFREEQKR 392
           +E+ +   +  +EEQ++
Sbjct: 758 EEQQRLAERQLQEEQEK 774


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 37.0 bits (84), Expect = 0.063
 Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 234  LEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQ 293
            LE++I++    Q KD  KK++  +++ + I     I+   K+ K ++  E K++ H  +Q
Sbjct: 4092 LELNIAQNMVSQVKDFVKKLQSKQASVNTI-----IEKVNKLTKKEESPEHKEINHLNDQ 4146

Query: 294  ILPPQDLSHYIKDKTRQTIPRIRNYYFC 321
             L     S+ +  +  + + R R+Y+ C
Sbjct: 4147 WLDLCRQSNNLCLQREEDLQRTRDYHDC 4174


>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
            [Homo sapiens]
          Length = 8797

 Score = 37.0 bits (84), Expect = 0.063
 Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 234  LEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQ 293
            LE++I++    Q KD  KK++  +++ + I     I+   K+ K ++  E K++ H  +Q
Sbjct: 4163 LELNIAQNMVSQVKDFVKKLQSKQASVNTI-----IEKVNKLTKKEESPEHKEINHLNDQ 4217

Query: 294  ILPPQDLSHYIKDKTRQTIPRIRNYYFC 321
             L     S+ +  +  + + R R+Y+ C
Sbjct: 4218 WLDLCRQSNNLCLQREEDLQRTRDYHDC 4245


>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
           [Homo sapiens]
          Length = 651

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 64/280 (22%), Positives = 108/280 (38%), Gaps = 24/280 (8%)

Query: 27  KSEVNKHETALEMQNPNLNNKECCFTFTLNG-NSRKLDRSVFTAYGKPSESIYSALSAND 85
           K   +  ET  E QN    +K C      +  NS+K +         P + +  + ++ND
Sbjct: 173 KKSKSSSETNPESQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSND 232

Query: 86  YFSERI-KNQFNKNIIVYEEKTIDGHINLGMPLKCLPSDSH----FKITFGQRKSSKEDG 140
             SE   +N  N + ++   ++ D  IN    L+    ++      K T   +K +K++ 
Sbjct: 233 PISEICSENSLNVDFLMLVGQSDDESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNA 292

Query: 141 HILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSKLCIYALKGETIEGALCKDGR 200
                 E+ + +          +   K VK N   +   K      +    E    KD R
Sbjct: 293 KKSSDAESEDSKD--------AKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDER 344

Query: 201 FRSDIGEFEWKLKEGHKKIYGKQ--SMVDEVSGKVLEM---DISKKKALQQKDIHKKIKQ 255
              D  + + KLK+  KK   K+     D  SG   +      + KKA +  D  K  K+
Sbjct: 345 --KDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKDAKK 402

Query: 256 NESATDEINHQSLIQSKKKVHKPKKDGET---KDVEHSRE 292
              +TD  +     +S+K   K KKD +T   K V++  E
Sbjct: 403 ITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDEE 442


>gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transferase
           3 [Homo sapiens]
          Length = 998

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 16/71 (22%), Positives = 35/71 (49%)

Query: 338 PHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSP 397
           PH  RR  +N   Q+  +   + +   + A++H     K +A+WV+++ ++ +    ++ 
Sbjct: 757 PHNRRRQVLNTRAQEPKLCWPQGFSWSHRAVVHFVVPVKNQARWVQQFIKDMENLFQVTG 816

Query: 398 AKQFNIYKKDF 408
              FNI   D+
Sbjct: 817 DPHFNIVITDY 827


>gi|188219599 N-myc and STAT interactor [Homo sapiens]
          Length = 307

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 19/163 (11%)

Query: 218 KIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKK---- 273
           K +     + +   K L  +I+KK    +K+I K   + + AT E   +  I   K    
Sbjct: 13  KEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEATKEFQIKEDIPETKMKFL 72

Query: 274 KVHKPKKDGETKDVEHSRE-------QILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRK 326
            V  P+ D +  ++  S +       +I   Q L  + K++  Q +  +  ++      +
Sbjct: 73  SVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQNVVSMSKHHV-----Q 127

Query: 327 YRQINSQVRRRP---HLGRRYAINLDVQKEAINLLKNYQTLNE 366
            + +N +V  +P   + G R+ + ++V K  IN+ +   TL E
Sbjct: 128 IKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPDTLRE 170


>gi|148746195 trichohyalin [Homo sapiens]
          Length = 1943

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 34/204 (16%), Positives = 93/204 (45%), Gaps = 20/204 (9%)

Query: 207  EFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQ 266
            E E + ++  ++ Y K+  + +   ++L  +  K++  +++  +++ ++ +   +++  +
Sbjct: 1007 EREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGE 1066

Query: 267  SLIQSKKKVHKPKKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRK 326
               +++++    ++  + ++++   EQ+L  +      +++ RQ          C    +
Sbjct: 1067 ER-ETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQ----------CREEEE 1115

Query: 327  YRQINSQV-------RRRPHLGRRYAINLDVQKEAINLLKN--YQTLNEAIMHQYPNFKE 377
             +Q   Q+       RRR  L R+Y    +VQ+E   LL+    +   + +  QY   +E
Sbjct: 1116 LQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEE 1175

Query: 378  EAQWVRKYFREEQKRMNLSPAKQF 401
              Q   +  REEQ++      +Q+
Sbjct: 1176 LQQEEEQLLREEQEKRRQERERQY 1199


>gi|71061468 centromere protein E [Homo sapiens]
          Length = 2701

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 25/238 (10%)

Query: 166  KKIVKINELHEKGSKLCIYALKGETI----EGALCKDGRFRSDIGEFEWKLKEGHKKIYG 221
            K +   N L E   ++ I   + E +    E    +  + + +  E   K+KE  +K Y 
Sbjct: 1570 KMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQ 1629

Query: 222  --KQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPK 279
              K + V+E   K+ E++  K++   QK   + I+       +I H++L +  + V K  
Sbjct: 1630 FLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENL-EEMRSVTK-- 1686

Query: 280  KDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPH 339
               E  D+    E +   +D    +K+  R+TI R        L ++       +  + H
Sbjct: 1687 ---ERDDLRSVEETLKVERD---QLKENLRETITR-------DLEKQEELKIVHMHLKEH 1733

Query: 340  ---LGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 394
               + +   I  +   E  N+ K+ +  N+A+  Q    +EE +    + +E+Q+ ++
Sbjct: 1734 QETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETID 1791


>gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo
           sapiens]
          Length = 641

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 34/189 (17%), Positives = 87/189 (46%), Gaps = 26/189 (13%)

Query: 213 KEGHKK---IYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKK---IKQNESATDEINH- 265
           K+ H+K   + G +  ++EV  K + +++ +K    +  + +K   I + E  T++I   
Sbjct: 373 KDIHEKQDTLIGLRQQLEEV--KAINIEMYQKLQGSEDGLKEKNEIIARLEEKTNKITAA 430

Query: 266 -QSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLP 324
            + L Q  ++  K + + E +D ++ +E +     L   I  K +Q +            
Sbjct: 431 MRQLEQRLQQAEKAQMEAEDEDEKYLQECLSKSDSLQKQISQKEKQLV------------ 478

Query: 325 RKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRK 384
               Q+ + ++      +    +L  +K+A++ L+N      ++  ++ N ++E Q ++K
Sbjct: 479 ----QLETDLKIEKEWRQTLQEDLQKEKDALSHLRNETQQIISLKKEFLNLQDENQQLKK 534

Query: 385 YFREEQKRM 393
            + E+++ +
Sbjct: 535 IYHEQEQAL 543


>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
          Length = 1758

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 237  DISKKKALQQKDIHKKIKQNESATDEINHQ-SLIQSKKKVHKPKKDGETKDVEHSREQ 293
            D  KKK  ++K  HKK K+++        +  L +S+K  HK KK  + KD E  +E+
Sbjct: 1691 DSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKNKDKEKEKEK 1748


>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
          Length = 1792

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 237  DISKKKALQQKDIHKKIKQNESATDEINHQ-SLIQSKKKVHKPKKDGETKDVEHSREQ 293
            D  KKK  ++K  HKK K+++        +  L +S+K  HK KK  + KD E  +E+
Sbjct: 1725 DSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKNKDKEKEKEK 1782


>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
          Length = 495

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 15/161 (9%)

Query: 143 LRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSKLCIYALKGETIEGALCKDGRFR 202
           LR  +N   E  +   +      K++ ++    E+   + +  LK E++     KD + R
Sbjct: 57  LRLLQNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESL-----KDEKMR 111

Query: 203 SDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQK--------DIHKKIK 254
             + E   +L+E  KK+     M  E + ++ E D  K + +++         + HK+I 
Sbjct: 112 QQVRENSIELRELEKKLKAAY-MNKERAAQIAEKDAIKYEQMKRDAEIAKTMMEEHKRII 170

Query: 255 QNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQIL 295
           + E+A ++  +++  Q    + K  ++ E K  E + EQ+L
Sbjct: 171 KEENAAEDKRNKAKAQYYLDLEKQLEEQEKKKQE-AYEQLL 210


>gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]
          Length = 1173

 Score = 33.5 bits (75), Expect = 0.69
 Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 27/175 (15%)

Query: 225 MVDEVSGKVLEMDISKKKALQQ--KDIHKKIKQNESATDEINHQSLIQ---SKKKVHKPK 279
           M +E S KV   D++  +  Q   KD+ +KI Q  +    I+    +Q    +K+  + K
Sbjct: 640 MPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHK 699

Query: 280 KDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPH 339
            D  +  +E +R+ I   Q+   ++K  T +            L  +  QI++ ++RR  
Sbjct: 700 LDTVSSKIELNRKLIQDQQEQIQHLKSTTNE------------LKSEKLQISTNLQRRQQ 747

Query: 340 LGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 394
           L          +++ + L    Q+L   I             + K+ +E+++ +N
Sbjct: 748 L----------EEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELIN 792


>gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]
          Length = 1312

 Score = 33.5 bits (75), Expect = 0.69
 Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 27/175 (15%)

Query: 225 MVDEVSGKVLEMDISKKKALQQ--KDIHKKIKQNESATDEINHQSLIQ---SKKKVHKPK 279
           M +E S KV   D++  +  Q   KD+ +KI Q  +    I+    +Q    +K+  + K
Sbjct: 779 MPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHK 838

Query: 280 KDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPH 339
            D  +  +E +R+ I   Q+   ++K  T +            L  +  QI++ ++RR  
Sbjct: 839 LDTVSSKIELNRKLIQDQQEQIQHLKSTTNE------------LKSEKLQISTNLQRRQQ 886

Query: 340 LGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 394
           L          +++ + L    Q+L   I             + K+ +E+++ +N
Sbjct: 887 L----------EEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELIN 931


>gi|219803769 trichoplein [Homo sapiens]
          Length = 498

 Score = 33.1 bits (74), Expect = 0.90
 Identities = 51/251 (20%), Positives = 104/251 (41%), Gaps = 44/251 (17%)

Query: 210 WKLKEGHKKIYGKQSMVDEVSGKVLEMDI--SKKKALQQKDIHKKIKQNESATDEINHQS 267
           W++++  KK   +Q    E   K  E +   ++++AL++    ++ +Q E   D++  ++
Sbjct: 166 WEMQKEEKK---QQEATAEQENKRYENEYERARREALERMKAEEERRQLE---DKLQAEA 219

Query: 268 LIQSKKKVHKPKKDGETKDVEHSREQILPPQ-DLSHYIKDKTRQTIPR--------IRNY 318
           L+Q  +++    K+ E   ++  +E +L  + +L    +++ +    R        +R+ 
Sbjct: 220 LLQQMEELKL--KEVEATKLKKEQENLLKQRWELERLEEERKQMEAFRQKAELGRFLRHQ 277

Query: 319 YFCSLPRKYRQINSQVR----------------RRPHLGRRYAINLDV--QKEAINLLKN 360
           Y   L R+ +QI  ++                 +R HL RR  +  DV   K+AI     
Sbjct: 278 YNAQLSRRTQQIQEELEADRRILQALLEKEDESQRLHLARREQVMADVAWMKQAIEEQLQ 337

Query: 361 YQTLNEAIMHQYPNF-------KEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTA 413
            +   EA +             K EA+W R+    ++    +   +Q  I +K      A
Sbjct: 338 LERAREAELQMLLREEAKEMWEKREAEWARERSARDRLMSEVLTGRQQQIQEKIEQNRRA 397

Query: 414 NSVSVATCEQL 424
              S+   EQL
Sbjct: 398 QEESLKHREQL 408


>gi|14150056 trichoplein [Homo sapiens]
          Length = 498

 Score = 33.1 bits (74), Expect = 0.90
 Identities = 51/251 (20%), Positives = 104/251 (41%), Gaps = 44/251 (17%)

Query: 210 WKLKEGHKKIYGKQSMVDEVSGKVLEMDI--SKKKALQQKDIHKKIKQNESATDEINHQS 267
           W++++  KK   +Q    E   K  E +   ++++AL++    ++ +Q E   D++  ++
Sbjct: 166 WEMQKEEKK---QQEATAEQENKRYENEYERARREALERMKAEEERRQLE---DKLQAEA 219

Query: 268 LIQSKKKVHKPKKDGETKDVEHSREQILPPQ-DLSHYIKDKTRQTIPR--------IRNY 318
           L+Q  +++    K+ E   ++  +E +L  + +L    +++ +    R        +R+ 
Sbjct: 220 LLQQMEELKL--KEVEATKLKKEQENLLKQRWELERLEEERKQMEAFRQKAELGRFLRHQ 277

Query: 319 YFCSLPRKYRQINSQVR----------------RRPHLGRRYAINLDV--QKEAINLLKN 360
           Y   L R+ +QI  ++                 +R HL RR  +  DV   K+AI     
Sbjct: 278 YNAQLSRRTQQIQEELEADRRILQALLEKEDESQRLHLARREQVMADVAWMKQAIEEQLQ 337

Query: 361 YQTLNEAIMHQYPNF-------KEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTA 413
            +   EA +             K EA+W R+    ++    +   +Q  I +K      A
Sbjct: 338 LERAREAELQMLLREEAKEMWEKREAEWARERSARDRLMSEVLTGRQQQIQEKIEQNRRA 397

Query: 414 NSVSVATCEQL 424
              S+   EQL
Sbjct: 398 QEESLKHREQL 408


>gi|116014339 olfactomedin-like 2A [Homo sapiens]
          Length = 652

 Score = 33.1 bits (74), Expect = 0.90
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 9/71 (12%)

Query: 207 EFEWK---LKEGHKKIYGKQSMVDEVSGKVLEMDISK------KKALQQKDIHKKIKQNE 257
           E EWK   LK+   ++   QSMVD + G +  MD+ K      K A Q   + + IK N 
Sbjct: 101 ENEWKMEKLKKQAPELLKLQSMVDLLEGTLYSMDLMKVHAYVHKVASQMNTLEESIKANL 160

Query: 258 SATDEINHQSL 268
           S  +E+   S+
Sbjct: 161 SRENEVVKDSV 171


>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
            sapiens]
          Length = 1938

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 23/135 (17%)

Query: 159  VAIGRTRKKIVKI-NELHEKGSKLCIYALKG-ETIEGALCKDGRFRSDIGEFEWKLKEGH 216
            +A+   +K+I K+ N + E  ++L +   +G E ++GA     ++   + E  ++ +E H
Sbjct: 1807 LALKGGKKQIQKLENRVRELENELDVEQKRGAEALKGA----HKYERKVKEMTYQAEEDH 1862

Query: 217  KKIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVH 276
            K I   Q +VD++  KV                 K  K+     +E  +  L + ++  H
Sbjct: 1863 KNILRLQDLVDKLQAKV-----------------KSYKRQAEEAEEQANTQLSRCRRVQH 1905

Query: 277  KPKKDGETKDVEHSR 291
            + ++  E  D+  S+
Sbjct: 1906 ELEEAAERADIAESQ 1920


>gi|110815815 centlein isoform 1 [Homo sapiens]
          Length = 1406

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 28/131 (21%), Positives = 57/131 (43%), Gaps = 5/131 (3%)

Query: 189 ETIEGALCKDGRFRSDIGEFEW---KLKEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQ 245
           E +E  L K     + +  FE    KLKEG+KK+  +   +  +  +  E   +++K L+
Sbjct: 685 EMLEQTLQKVTELENRLKSFEKRSRKLKEGNKKLMKENDFLKSLLKQQQEDTETREKELE 744

Query: 246 QKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDLSHYIK 305
           Q  I K  K  E    E+  +      +     ++  E   + +  E+++ P + SH   
Sbjct: 745 Q--IIKGSKDVEKENTELQVKISELETEVTSLRRQVAEANALRNENEELINPMEKSHQSA 802

Query: 306 DKTRQTIPRIR 316
           D+ +  +  ++
Sbjct: 803 DRAKSEMATMK 813


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,976,823
Number of Sequences: 37866
Number of extensions: 1315728
Number of successful extensions: 4022
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 3929
Number of HSP's gapped (non-prelim): 143
length of query: 704
length of database: 18,247,518
effective HSP length: 109
effective length of query: 595
effective length of database: 14,120,124
effective search space: 8401473780
effective search space used: 8401473780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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