Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 218156273
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|218156273 hypothetical protein LOC374393 isoform b [Homo
sapiens]
(704 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|218156275 hypothetical protein LOC374393 isoform b [Homo sapi... 1461 0.0
gi|218156273 hypothetical protein LOC374393 isoform b [Homo sapi... 1461 0.0
gi|39573718 hypothetical protein LOC374393 isoform a [Homo sapiens] 1461 0.0
gi|215983098 hypothetical protein LOC63901 [Homo sapiens] 261 2e-69
gi|215983096 hypothetical protein LOC63901 [Homo sapiens] 261 2e-69
gi|215983094 hypothetical protein LOC63901 [Homo sapiens] 261 2e-69
gi|38505211 hypothetical protein LOC63901 [Homo sapiens] 261 2e-69
gi|38505209 hypothetical protein LOC63901 [Homo sapiens] 261 2e-69
gi|196114999 special AT-rich sequence binding protein 1 [Homo sa... 39 0.016
gi|4506791 special AT-rich sequence binding protein 1 [Homo sapi... 39 0.016
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 38 0.028
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 38 0.028
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 37 0.063
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 37 0.063
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 36 0.11
gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 36 0.14
gi|188219599 N-myc and STAT interactor [Homo sapiens] 36 0.14
gi|148746195 trichohyalin [Homo sapiens] 35 0.31
gi|71061468 centromere protein E [Homo sapiens] 35 0.31
gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo sa... 35 0.31
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 34 0.41
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 34 0.41
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens] 34 0.41
gi|19924131 RAD50 homolog isoform 2 [Homo sapiens] 33 0.69
gi|19924129 RAD50 homolog isoform 1 [Homo sapiens] 33 0.69
gi|219803769 trichoplein [Homo sapiens] 33 0.90
gi|14150056 trichoplein [Homo sapiens] 33 0.90
gi|116014339 olfactomedin-like 2A [Homo sapiens] 33 0.90
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 33 1.2
gi|110815815 centlein isoform 1 [Homo sapiens] 33 1.2
>gi|218156275 hypothetical protein LOC374393 isoform b [Homo
sapiens]
Length = 704
Score = 1461 bits (3782), Expect = 0.0
Identities = 704/704 (100%), Positives = 704/704 (100%)
Query: 1 MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 60
MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR
Sbjct: 1 MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 60
Query: 61 KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 120
KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL
Sbjct: 61 KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 120
Query: 121 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 180
PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK
Sbjct: 121 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 180
Query: 181 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 240
LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK
Sbjct: 181 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 240
Query: 241 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 300
KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL
Sbjct: 241 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 300
Query: 301 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 360
SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN
Sbjct: 301 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 360
Query: 361 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 420
YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT
Sbjct: 361 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 420
Query: 421 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 480
CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS
Sbjct: 421 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 480
Query: 481 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 540
KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS
Sbjct: 481 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 540
Query: 541 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 600
TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL
Sbjct: 541 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 600
Query: 601 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 660
SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI
Sbjct: 601 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 660
Query: 661 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 704
LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC
Sbjct: 661 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 704
>gi|218156273 hypothetical protein LOC374393 isoform b [Homo
sapiens]
Length = 704
Score = 1461 bits (3782), Expect = 0.0
Identities = 704/704 (100%), Positives = 704/704 (100%)
Query: 1 MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 60
MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR
Sbjct: 1 MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 60
Query: 61 KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 120
KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL
Sbjct: 61 KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 120
Query: 121 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 180
PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK
Sbjct: 121 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 180
Query: 181 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 240
LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK
Sbjct: 181 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 240
Query: 241 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 300
KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL
Sbjct: 241 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 300
Query: 301 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 360
SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN
Sbjct: 301 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 360
Query: 361 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 420
YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT
Sbjct: 361 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 420
Query: 421 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 480
CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS
Sbjct: 421 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 480
Query: 481 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 540
KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS
Sbjct: 481 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 540
Query: 541 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 600
TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL
Sbjct: 541 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 600
Query: 601 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 660
SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI
Sbjct: 601 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 660
Query: 661 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 704
LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC
Sbjct: 661 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 704
>gi|39573718 hypothetical protein LOC374393 isoform a [Homo sapiens]
Length = 734
Score = 1461 bits (3782), Expect = 0.0
Identities = 704/704 (100%), Positives = 704/704 (100%)
Query: 1 MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 60
MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR
Sbjct: 31 MKQTHADTPVDHCLSGIRKCSSTFKLKSEVNKHETALEMQNPNLNNKECCFTFTLNGNSR 90
Query: 61 KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 120
KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL
Sbjct: 91 KLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINLGMPLKCL 150
Query: 121 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 180
PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK
Sbjct: 151 PSDSHFKITFGQRKSSKEDGHILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSK 210
Query: 181 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 240
LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK
Sbjct: 211 LCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISK 270
Query: 241 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 300
KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL
Sbjct: 271 KKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDL 330
Query: 301 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 360
SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN
Sbjct: 331 SHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKN 390
Query: 361 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 420
YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT
Sbjct: 391 YQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSVAT 450
Query: 421 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 480
CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS
Sbjct: 451 CEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDIIS 510
Query: 481 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 540
KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS
Sbjct: 511 KCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQPS 570
Query: 541 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 600
TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL
Sbjct: 571 TGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRSFL 630
Query: 601 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 660
SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI
Sbjct: 631 SEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMDSI 690
Query: 661 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 704
LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC
Sbjct: 691 LCDIKKTNESLYKSLNDEKLETYDEEKGKQESSLQDHQIEPMEC 734
>gi|215983098 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 261 bits (666), Expect = 2e-69
Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)
Query: 359 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 418
+N L E I+ QYP+ K E++ + + F+++ K N F +++ FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344
Query: 419 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 478
+ L S SVG++ WD+ TG ATCFVF G +I TCRHV+ +VG PS W I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403
Query: 479 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 538
I +C +VTF Y E N+F +EPW ++ NE LDYA+LKLKENG P L+ I+P
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463
Query: 539 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 598
P +GLI++IGHP G+ K+ID C VIP +R KK CQ+ + + M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519
Query: 599 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 658
F V N ++YDT F G+SGSPVF++ G LVA+H G Y ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579
Query: 659 SILCDIKKTNESLYKS--LNDEKLETYDEE 686
SIL DIK+ ++ Y+ +N + +E +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609
Score = 137 bits (344), Expect = 4e-32
Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 3/191 (1%)
Query: 54 TLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINL 113
TL N R+ + S+Y AL+ + I+ + ++V + I +INL
Sbjct: 81 TLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQGQEMLVRGTEGIKEYINL 140
Query: 114 GMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECILF--HVVAIGRTRKKIVK 170
GMPL C P ITF Q KS KED HI + + + EC+ F H + IG+ +++IVK
Sbjct: 141 GMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVKFYIHAIGIGKCKRRIVK 200
Query: 171 INELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVS 230
+LH+KG KLC+YA KGETI+ ALCKDGRF S + +WKL E + I VDE+
Sbjct: 201 CGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLIENNDTILESTQPVDELE 260
Query: 231 GKVLEMDISKK 241
G+ ++++ K+
Sbjct: 261 GRYFQVEVEKR 271
>gi|215983096 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 261 bits (666), Expect = 2e-69
Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)
Query: 359 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 418
+N L E I+ QYP+ K E++ + + F+++ K N F +++ FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344
Query: 419 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 478
+ L S SVG++ WD+ TG ATCFVF G +I TCRHV+ +VG PS W I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403
Query: 479 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 538
I +C +VTF Y E N+F +EPW ++ NE LDYA+LKLKENG P L+ I+P
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463
Query: 539 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 598
P +GLI++IGHP G+ K+ID C VIP +R KK CQ+ + + M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519
Query: 599 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 658
F V N ++YDT F G+SGSPVF++ G LVA+H G Y ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579
Query: 659 SILCDIKKTNESLYKS--LNDEKLETYDEE 686
SIL DIK+ ++ Y+ +N + +E +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609
Score = 137 bits (344), Expect = 4e-32
Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 3/191 (1%)
Query: 54 TLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINL 113
TL N R+ + S+Y AL+ + I+ + ++V + I +INL
Sbjct: 81 TLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQGQEMLVRGTEGIKEYINL 140
Query: 114 GMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECILF--HVVAIGRTRKKIVK 170
GMPL C P ITF Q KS KED HI + + + EC+ F H + IG+ +++IVK
Sbjct: 141 GMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVKFYIHAIGIGKCKRRIVK 200
Query: 171 INELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVS 230
+LH+KG KLC+YA KGETI+ ALCKDGRF S + +WKL E + I VDE+
Sbjct: 201 CGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLIENNDTILESTQPVDELE 260
Query: 231 GKVLEMDISKK 241
G+ ++++ K+
Sbjct: 261 GRYFQVEVEKR 271
>gi|215983094 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 261 bits (666), Expect = 2e-69
Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)
Query: 359 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 418
+N L E I+ QYP+ K E++ + + F+++ K N F +++ FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344
Query: 419 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 478
+ L S SVG++ WD+ TG ATCFVF G +I TCRHV+ +VG PS W I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403
Query: 479 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 538
I +C +VTF Y E N+F +EPW ++ NE LDYA+LKLKENG P L+ I+P
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463
Query: 539 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 598
P +GLI++IGHP G+ K+ID C VIP +R KK CQ+ + + M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519
Query: 599 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 658
F V N ++YDT F G+SGSPVF++ G LVA+H G Y ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579
Query: 659 SILCDIKKTNESLYKS--LNDEKLETYDEE 686
SIL DIK+ ++ Y+ +N + +E +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609
Score = 137 bits (344), Expect = 4e-32
Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 3/191 (1%)
Query: 54 TLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINL 113
TL N R+ + S+Y AL+ + I+ + ++V + I +INL
Sbjct: 81 TLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQGQEMLVRGTEGIKEYINL 140
Query: 114 GMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECILF--HVVAIGRTRKKIVK 170
GMPL C P ITF Q KS KED HI + + + EC+ F H + IG+ +++IVK
Sbjct: 141 GMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVKFYIHAIGIGKCKRRIVK 200
Query: 171 INELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVS 230
+LH+KG KLC+YA KGETI+ ALCKDGRF S + +WKL E + I VDE+
Sbjct: 201 CGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLIENNDTILESTQPVDELE 260
Query: 231 GKVLEMDISKK 241
G+ ++++ K+
Sbjct: 261 GRYFQVEVEKR 271
>gi|38505211 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 261 bits (666), Expect = 2e-69
Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)
Query: 359 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 418
+N L E I+ QYP+ K E++ + + F+++ K N F +++ FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344
Query: 419 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 478
+ L S SVG++ WD+ TG ATCFVF G +I TCRHV+ +VG PS W I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403
Query: 479 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 538
I +C +VTF Y E N+F +EPW ++ NE LDYA+LKLKENG P L+ I+P
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463
Query: 539 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 598
P +GLI++IGHP G+ K+ID C VIP +R KK CQ+ + + M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519
Query: 599 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 658
F V N ++YDT F G+SGSPVF++ G LVA+H G Y ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579
Query: 659 SILCDIKKTNESLYKS--LNDEKLETYDEE 686
SIL DIK+ ++ Y+ +N + +E +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609
Score = 137 bits (344), Expect = 4e-32
Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 3/191 (1%)
Query: 54 TLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINL 113
TL N R+ + S+Y AL+ + I+ + ++V + I +INL
Sbjct: 81 TLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQGQEMLVRGTEGIKEYINL 140
Query: 114 GMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECILF--HVVAIGRTRKKIVK 170
GMPL C P ITF Q KS KED HI + + + EC+ F H + IG+ +++IVK
Sbjct: 141 GMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVKFYIHAIGIGKCKRRIVK 200
Query: 171 INELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVS 230
+LH+KG KLC+YA KGETI+ ALCKDGRF S + +WKL E + I VDE+
Sbjct: 201 CGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLIENNDTILESTQPVDELE 260
Query: 231 GKVLEMDISKK 241
G+ ++++ K+
Sbjct: 261 GRYFQVEVEKR 271
>gi|38505209 hypothetical protein LOC63901 [Homo sapiens]
Length = 611
Score = 261 bits (666), Expect = 2e-69
Identities = 139/330 (42%), Positives = 198/330 (60%), Gaps = 9/330 (2%)
Query: 359 KNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTANSVSV 418
+N L E I+ QYP+ K E++ + + F+++ K N F +++ FGK+T NS S+
Sbjct: 287 RNTCVLREQIVAQYPSLKRESEKIIENFKKKMKVKNGETL--FELHRTTFGKVTKNSSSI 344
Query: 419 ATCEQLTYYSKSVGFMQWDNNGNTGNATCFVFNGGYIFTCRHVVHLMVGKNTHPSLWPDI 478
+ L S SVG++ WD+ TG ATCFVF G +I TCRHV+ +VG PS W I
Sbjct: 345 KVVKLLVRLSDSVGYLFWDS-ATTGYATCFVFKGLFILTCRHVIDSIVGDGIEPSKWATI 403
Query: 479 ISKCAKVTFTYTEFCPTPDNWFSIEPWLKVSNENLDYAILKLKENGNAFPPGLWRQISPQ 538
I +C +VTF Y E N+F +EPW ++ NE LDYA+LKLKENG P L+ I+P
Sbjct: 404 IGQCVRVTFGYEELKDKETNYFFVEPWFEIHNEELDYAVLKLKENGQQVPMELYNGITPV 463
Query: 539 PSTGLIYLIGHPEGQIKKIDGCTVIPLNERLKKYPNDCQDGLVDLYDTTSNVYCMFTQRS 598
P +GLI++IGHP G+ K+ID C VIP +R KK CQ+ + + M+TQRS
Sbjct: 464 PLSGLIHIIGHPYGEKKQIDACAVIPQGQRAKK----CQERVQSKKAESPEYVHMYTQRS 519
Query: 599 FLSEVWNTHTLSYDTCFSDGSSGSPVFNASGKLVALHTFGLFYQRGFNVHALIEFGYSMD 658
F V N ++YDT F G+SGSPVF++ G LVA+H G Y ++IEFG +M+
Sbjct: 520 FQKIVHNPDVITYDTEFFFGASGSPVFDSKGSLVAMHAAGFAYTYQNETRSIIEFGSTME 579
Query: 659 SILCDIKKTNESLYKS--LNDEKLETYDEE 686
SIL DIK+ ++ Y+ +N + +E +E
Sbjct: 580 SILLDIKQRHKPWYEEVFVNQQDVEMMSDE 609
Score = 137 bits (344), Expect = 4e-32
Identities = 73/191 (38%), Positives = 107/191 (56%), Gaps = 3/191 (1%)
Query: 54 TLNGNSRKLDRSVFTAYGKPSESIYSALSANDYFSERIKNQFNKNIIVYEEKTIDGHINL 113
TL N R+ + S+Y AL+ + I+ + ++V + I +INL
Sbjct: 81 TLKVNHRRNQDMKLKLTHSENSSLYMALNTLQAVRKEIETHQGQEMLVRGTEGIKEYINL 140
Query: 114 GMPLKCLPSDSHFKITFGQRKSS-KEDGHILRQCENPNMECILF--HVVAIGRTRKKIVK 170
GMPL C P ITF Q KS KED HI + + + EC+ F H + IG+ +++IVK
Sbjct: 141 GMPLSCFPEGGQVVITFSQSKSKQKEDNHIFGRQDKASTECVKFYIHAIGIGKCKRRIVK 200
Query: 171 INELHEKGSKLCIYALKGETIEGALCKDGRFRSDIGEFEWKLKEGHKKIYGKQSMVDEVS 230
+LH+KG KLC+YA KGETI+ ALCKDGRF S + +WKL E + I VDE+
Sbjct: 201 CGKLHKKGRKLCVYAFKGETIKDALCKDGRFLSFLENDDWKLIENNDTILESTQPVDELE 260
Query: 231 GKVLEMDISKK 241
G+ ++++ K+
Sbjct: 261 GRYFQVEVEKR 271
>gi|196114999 special AT-rich sequence binding protein 1 [Homo
sapiens]
Length = 763
Score = 38.9 bits (89), Expect = 0.016
Identities = 38/184 (20%), Positives = 79/184 (42%), Gaps = 13/184 (7%)
Query: 223 QSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDG 282
QSM+ + ++S K + +K K+ + E++ S + + H G
Sbjct: 213 QSMISSIVNSTYYANVSAAKCQEFGRWYKHFKKTKDMMVEMDSLSELSQQGANHV--NFG 270
Query: 283 ETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGR 342
+ ++ EQ P LSH + R +P + S P + +N Q+ L +
Sbjct: 271 QQPVPGNTAEQPPSPAQLSHGSQPSVRTPLPNLHPG-LVSTPISPQLVNQQLVMAQLLNQ 329
Query: 343 RYAINLDVQKEAINLLKNY--------QTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 394
+YA+N + ++++N + Y +++N+ + Q E + + ++ R+E KR
Sbjct: 330 QYAVNRLLAQQSLN--QQYLNHPPPVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAG 387
Query: 395 LSPA 398
+S A
Sbjct: 388 ISQA 391
>gi|4506791 special AT-rich sequence binding protein 1 [Homo
sapiens]
Length = 763
Score = 38.9 bits (89), Expect = 0.016
Identities = 38/184 (20%), Positives = 79/184 (42%), Gaps = 13/184 (7%)
Query: 223 QSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDG 282
QSM+ + ++S K + +K K+ + E++ S + + H G
Sbjct: 213 QSMISSIVNSTYYANVSAAKCQEFGRWYKHFKKTKDMMVEMDSLSELSQQGANHV--NFG 270
Query: 283 ETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPHLGR 342
+ ++ EQ P LSH + R +P + S P + +N Q+ L +
Sbjct: 271 QQPVPGNTAEQPPSPAQLSHGSQPSVRTPLPNLHPG-LVSTPISPQLVNQQLVMAQLLNQ 329
Query: 343 RYAINLDVQKEAINLLKNY--------QTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 394
+YA+N + ++++N + Y +++N+ + Q E + + ++ R+E KR
Sbjct: 330 QYAVNRLLAQQSLN--QQYLNHPPPVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAG 387
Query: 395 LSPA 398
+S A
Sbjct: 388 ISQA 391
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 38.1 bits (87), Expect = 0.028
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 28/197 (14%)
Query: 213 KEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQ------KDIHKKIKQNESAT------ 260
+E K+I K + +DE + K E ++++KA ++ +++ + KQ E A
Sbjct: 593 EEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQ 652
Query: 261 ---DEINHQSLIQSKKKVHKP--KKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRI 315
+E HQ L+Q KK+ + +K E K + REQ Q+ + + +
Sbjct: 653 QEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQER 712
Query: 316 RNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNF 375
R + RQ+ Q RRR + L +++A+ L K Q E + +
Sbjct: 713 R--------EQERQLAEQERRREQERLQAERELQEREKALRLQKE-QLQRE--LEEKKKK 761
Query: 376 KEEAQWVRKYFREEQKR 392
+E+ + + +EEQ++
Sbjct: 762 EEQQRLAERQLQEEQEK 778
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 38.1 bits (87), Expect = 0.028
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 28/197 (14%)
Query: 213 KEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQ------KDIHKKIKQNESAT------ 260
+E K+I K + +DE + K E ++++KA ++ +++ + KQ E A
Sbjct: 589 EEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQ 648
Query: 261 ---DEINHQSLIQSKKKVHKP--KKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRI 315
+E HQ L+Q KK+ + +K E K + REQ Q+ + + +
Sbjct: 649 QEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQER 708
Query: 316 RNYYFCSLPRKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNF 375
R + RQ+ Q RRR + L +++A+ L K Q E + +
Sbjct: 709 R--------EQERQLAEQERRREQERLQAERELQEREKALRLQKE-QLQRE--LEEKKKK 757
Query: 376 KEEAQWVRKYFREEQKR 392
+E+ + + +EEQ++
Sbjct: 758 EEQQRLAERQLQEEQEK 774
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 37.0 bits (84), Expect = 0.063
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 234 LEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQ 293
LE++I++ Q KD KK++ +++ + I I+ K+ K ++ E K++ H +Q
Sbjct: 4092 LELNIAQNMVSQVKDFVKKLQSKQASVNTI-----IEKVNKLTKKEESPEHKEINHLNDQ 4146
Query: 294 ILPPQDLSHYIKDKTRQTIPRIRNYYFC 321
L S+ + + + + R R+Y+ C
Sbjct: 4147 WLDLCRQSNNLCLQREEDLQRTRDYHDC 4174
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 37.0 bits (84), Expect = 0.063
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 234 LEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQ 293
LE++I++ Q KD KK++ +++ + I I+ K+ K ++ E K++ H +Q
Sbjct: 4163 LELNIAQNMVSQVKDFVKKLQSKQASVNTI-----IEKVNKLTKKEESPEHKEINHLNDQ 4217
Query: 294 ILPPQDLSHYIKDKTRQTIPRIRNYYFC 321
L S+ + + + + R R+Y+ C
Sbjct: 4218 WLDLCRQSNNLCLQREEDLQRTRDYHDC 4245
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 36.2 bits (82), Expect = 0.11
Identities = 64/280 (22%), Positives = 108/280 (38%), Gaps = 24/280 (8%)
Query: 27 KSEVNKHETALEMQNPNLNNKECCFTFTLNG-NSRKLDRSVFTAYGKPSESIYSALSAND 85
K + ET E QN +K C + NS+K + P + + + ++ND
Sbjct: 173 KKSKSSSETNPESQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSND 232
Query: 86 YFSERI-KNQFNKNIIVYEEKTIDGHINLGMPLKCLPSDSH----FKITFGQRKSSKEDG 140
SE +N N + ++ ++ D IN L+ ++ K T +K +K++
Sbjct: 233 PISEICSENSLNVDFLMLVGQSDDESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNA 292
Query: 141 HILRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSKLCIYALKGETIEGALCKDGR 200
E+ + + + K VK N + K + E KD R
Sbjct: 293 KKSSDAESEDSKD--------AKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDER 344
Query: 201 FRSDIGEFEWKLKEGHKKIYGKQ--SMVDEVSGKVLEM---DISKKKALQQKDIHKKIKQ 255
D + + KLK+ KK K+ D SG + + KKA + D K K+
Sbjct: 345 --KDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKDAKK 402
Query: 256 NESATDEINHQSLIQSKKKVHKPKKDGET---KDVEHSRE 292
+TD + +S+K K KKD +T K V++ E
Sbjct: 403 ITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDEE 442
>gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transferase
3 [Homo sapiens]
Length = 998
Score = 35.8 bits (81), Expect = 0.14
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 338 PHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMNLSP 397
PH RR +N Q+ + + + + A++H K +A+WV+++ ++ + ++
Sbjct: 757 PHNRRRQVLNTRAQEPKLCWPQGFSWSHRAVVHFVVPVKNQARWVQQFIKDMENLFQVTG 816
Query: 398 AKQFNIYKKDF 408
FNI D+
Sbjct: 817 DPHFNIVITDY 827
>gi|188219599 N-myc and STAT interactor [Homo sapiens]
Length = 307
Score = 35.8 bits (81), Expect = 0.14
Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 218 KIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKK---- 273
K + + + K L +I+KK +K+I K + + AT E + I K
Sbjct: 13 KEHSPDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEATKEFQIKEDIPETKMKFL 72
Query: 274 KVHKPKKDGETKDVEHSRE-------QILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRK 326
V P+ D + ++ S + +I Q L + K++ Q + + ++ +
Sbjct: 73 SVETPENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQNVVSMSKHHV-----Q 127
Query: 327 YRQINSQVRRRP---HLGRRYAINLDVQKEAINLLKNYQTLNE 366
+ +N +V +P + G R+ + ++V K IN+ + TL E
Sbjct: 128 IKDVNLEVTAKPVPLNSGVRFQVYVEVSKMKINVTEIPDTLRE 170
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 34.7 bits (78), Expect = 0.31
Identities = 34/204 (16%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 207 EFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQ 266
E E + ++ ++ Y K+ + + ++L + K++ +++ +++ ++ + +++ +
Sbjct: 1007 EREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGE 1066
Query: 267 SLIQSKKKVHKPKKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRK 326
+++++ ++ + ++++ EQ+L + +++ RQ C +
Sbjct: 1067 ER-ETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQ----------CREEEE 1115
Query: 327 YRQINSQV-------RRRPHLGRRYAINLDVQKEAINLLKN--YQTLNEAIMHQYPNFKE 377
+Q Q+ RRR L R+Y +VQ+E LL+ + + + QY +E
Sbjct: 1116 LQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEE 1175
Query: 378 EAQWVRKYFREEQKRMNLSPAKQF 401
Q + REEQ++ +Q+
Sbjct: 1176 LQQEEEQLLREEQEKRRQERERQY 1199
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 34.7 bits (78), Expect = 0.31
Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 25/238 (10%)
Query: 166 KKIVKINELHEKGSKLCIYALKGETI----EGALCKDGRFRSDIGEFEWKLKEGHKKIYG 221
K + N L E ++ I + E + E + + + + E K+KE +K Y
Sbjct: 1570 KMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENTKEIVAKMKESQEKEYQ 1629
Query: 222 --KQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVHKPK 279
K + V+E K+ E++ K++ QK + I+ +I H++L + + V K
Sbjct: 1630 FLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQILHENL-EEMRSVTK-- 1686
Query: 280 KDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPH 339
E D+ E + +D +K+ R+TI R L ++ + + H
Sbjct: 1687 ---ERDDLRSVEETLKVERD---QLKENLRETITR-------DLEKQEELKIVHMHLKEH 1733
Query: 340 ---LGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 394
+ + I + E N+ K+ + N+A+ Q +EE + + +E+Q+ ++
Sbjct: 1734 QETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETID 1791
>gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo
sapiens]
Length = 641
Score = 34.7 bits (78), Expect = 0.31
Identities = 34/189 (17%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 213 KEGHKK---IYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKK---IKQNESATDEINH- 265
K+ H+K + G + ++EV K + +++ +K + + +K I + E T++I
Sbjct: 373 KDIHEKQDTLIGLRQQLEEV--KAINIEMYQKLQGSEDGLKEKNEIIARLEEKTNKITAA 430
Query: 266 -QSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLP 324
+ L Q ++ K + + E +D ++ +E + L I K +Q +
Sbjct: 431 MRQLEQRLQQAEKAQMEAEDEDEKYLQECLSKSDSLQKQISQKEKQLV------------ 478
Query: 325 RKYRQINSQVRRRPHLGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRK 384
Q+ + ++ + +L +K+A++ L+N ++ ++ N ++E Q ++K
Sbjct: 479 ----QLETDLKIEKEWRQTLQEDLQKEKDALSHLRNETQQIISLKKEFLNLQDENQQLKK 534
Query: 385 YFREEQKRM 393
+ E+++ +
Sbjct: 535 IYHEQEQAL 543
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 34.3 bits (77), Expect = 0.41
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 237 DISKKKALQQKDIHKKIKQNESATDEINHQ-SLIQSKKKVHKPKKDGETKDVEHSREQ 293
D KKK ++K HKK K+++ + L +S+K HK KK + KD E +E+
Sbjct: 1691 DSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKNKDKEKEKEK 1748
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 34.3 bits (77), Expect = 0.41
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 237 DISKKKALQQKDIHKKIKQNESATDEINHQ-SLIQSKKKVHKPKKDGETKDVEHSREQ 293
D KKK ++K HKK K+++ + L +S+K HK KK + KD E +E+
Sbjct: 1725 DSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKNKDKEKEKEK 1782
>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
Length = 495
Score = 34.3 bits (77), Expect = 0.41
Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 143 LRQCENPNMECILFHVVAIGRTRKKIVKINELHEKGSKLCIYALKGETIEGALCKDGRFR 202
LR +N E + + K++ ++ E+ + + LK E++ KD + R
Sbjct: 57 LRLLQNEQFELDMEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESL-----KDEKMR 111
Query: 203 SDIGEFEWKLKEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQQK--------DIHKKIK 254
+ E +L+E KK+ M E + ++ E D K + +++ + HK+I
Sbjct: 112 QQVRENSIELRELEKKLKAAY-MNKERAAQIAEKDAIKYEQMKRDAEIAKTMMEEHKRII 170
Query: 255 QNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQIL 295
+ E+A ++ +++ Q + K ++ E K E + EQ+L
Sbjct: 171 KEENAAEDKRNKAKAQYYLDLEKQLEEQEKKKQE-AYEQLL 210
>gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]
Length = 1173
Score = 33.5 bits (75), Expect = 0.69
Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 27/175 (15%)
Query: 225 MVDEVSGKVLEMDISKKKALQQ--KDIHKKIKQNESATDEINHQSLIQ---SKKKVHKPK 279
M +E S KV D++ + Q KD+ +KI Q + I+ +Q +K+ + K
Sbjct: 640 MPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHK 699
Query: 280 KDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPH 339
D + +E +R+ I Q+ ++K T + L + QI++ ++RR
Sbjct: 700 LDTVSSKIELNRKLIQDQQEQIQHLKSTTNE------------LKSEKLQISTNLQRRQQ 747
Query: 340 LGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 394
L +++ + L Q+L I + K+ +E+++ +N
Sbjct: 748 L----------EEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELIN 792
>gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]
Length = 1312
Score = 33.5 bits (75), Expect = 0.69
Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 27/175 (15%)
Query: 225 MVDEVSGKVLEMDISKKKALQQ--KDIHKKIKQNESATDEINHQSLIQ---SKKKVHKPK 279
M +E S KV D++ + Q KD+ +KI Q + I+ +Q +K+ + K
Sbjct: 779 MPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHK 838
Query: 280 KDGETKDVEHSREQILPPQDLSHYIKDKTRQTIPRIRNYYFCSLPRKYRQINSQVRRRPH 339
D + +E +R+ I Q+ ++K T + L + QI++ ++RR
Sbjct: 839 LDTVSSKIELNRKLIQDQQEQIQHLKSTTNE------------LKSEKLQISTNLQRRQQ 886
Query: 340 LGRRYAINLDVQKEAINLLKNYQTLNEAIMHQYPNFKEEAQWVRKYFREEQKRMN 394
L +++ + L Q+L I + K+ +E+++ +N
Sbjct: 887 L----------EEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELIN 931
>gi|219803769 trichoplein [Homo sapiens]
Length = 498
Score = 33.1 bits (74), Expect = 0.90
Identities = 51/251 (20%), Positives = 104/251 (41%), Gaps = 44/251 (17%)
Query: 210 WKLKEGHKKIYGKQSMVDEVSGKVLEMDI--SKKKALQQKDIHKKIKQNESATDEINHQS 267
W++++ KK +Q E K E + ++++AL++ ++ +Q E D++ ++
Sbjct: 166 WEMQKEEKK---QQEATAEQENKRYENEYERARREALERMKAEEERRQLE---DKLQAEA 219
Query: 268 LIQSKKKVHKPKKDGETKDVEHSREQILPPQ-DLSHYIKDKTRQTIPR--------IRNY 318
L+Q +++ K+ E ++ +E +L + +L +++ + R +R+
Sbjct: 220 LLQQMEELKL--KEVEATKLKKEQENLLKQRWELERLEEERKQMEAFRQKAELGRFLRHQ 277
Query: 319 YFCSLPRKYRQINSQVR----------------RRPHLGRRYAINLDV--QKEAINLLKN 360
Y L R+ +QI ++ +R HL RR + DV K+AI
Sbjct: 278 YNAQLSRRTQQIQEELEADRRILQALLEKEDESQRLHLARREQVMADVAWMKQAIEEQLQ 337
Query: 361 YQTLNEAIMHQYPNF-------KEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTA 413
+ EA + K EA+W R+ ++ + +Q I +K A
Sbjct: 338 LERAREAELQMLLREEAKEMWEKREAEWARERSARDRLMSEVLTGRQQQIQEKIEQNRRA 397
Query: 414 NSVSVATCEQL 424
S+ EQL
Sbjct: 398 QEESLKHREQL 408
>gi|14150056 trichoplein [Homo sapiens]
Length = 498
Score = 33.1 bits (74), Expect = 0.90
Identities = 51/251 (20%), Positives = 104/251 (41%), Gaps = 44/251 (17%)
Query: 210 WKLKEGHKKIYGKQSMVDEVSGKVLEMDI--SKKKALQQKDIHKKIKQNESATDEINHQS 267
W++++ KK +Q E K E + ++++AL++ ++ +Q E D++ ++
Sbjct: 166 WEMQKEEKK---QQEATAEQENKRYENEYERARREALERMKAEEERRQLE---DKLQAEA 219
Query: 268 LIQSKKKVHKPKKDGETKDVEHSREQILPPQ-DLSHYIKDKTRQTIPR--------IRNY 318
L+Q +++ K+ E ++ +E +L + +L +++ + R +R+
Sbjct: 220 LLQQMEELKL--KEVEATKLKKEQENLLKQRWELERLEEERKQMEAFRQKAELGRFLRHQ 277
Query: 319 YFCSLPRKYRQINSQVR----------------RRPHLGRRYAINLDV--QKEAINLLKN 360
Y L R+ +QI ++ +R HL RR + DV K+AI
Sbjct: 278 YNAQLSRRTQQIQEELEADRRILQALLEKEDESQRLHLARREQVMADVAWMKQAIEEQLQ 337
Query: 361 YQTLNEAIMHQYPNF-------KEEAQWVRKYFREEQKRMNLSPAKQFNIYKKDFGKMTA 413
+ EA + K EA+W R+ ++ + +Q I +K A
Sbjct: 338 LERAREAELQMLLREEAKEMWEKREAEWARERSARDRLMSEVLTGRQQQIQEKIEQNRRA 397
Query: 414 NSVSVATCEQL 424
S+ EQL
Sbjct: 398 QEESLKHREQL 408
>gi|116014339 olfactomedin-like 2A [Homo sapiens]
Length = 652
Score = 33.1 bits (74), Expect = 0.90
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 207 EFEWK---LKEGHKKIYGKQSMVDEVSGKVLEMDISK------KKALQQKDIHKKIKQNE 257
E EWK LK+ ++ QSMVD + G + MD+ K K A Q + + IK N
Sbjct: 101 ENEWKMEKLKKQAPELLKLQSMVDLLEGTLYSMDLMKVHAYVHKVASQMNTLEESIKANL 160
Query: 258 SATDEINHQSL 268
S +E+ S+
Sbjct: 161 SRENEVVKDSV 171
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 32.7 bits (73), Expect = 1.2
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 23/135 (17%)
Query: 159 VAIGRTRKKIVKI-NELHEKGSKLCIYALKG-ETIEGALCKDGRFRSDIGEFEWKLKEGH 216
+A+ +K+I K+ N + E ++L + +G E ++GA ++ + E ++ +E H
Sbjct: 1807 LALKGGKKQIQKLENRVRELENELDVEQKRGAEALKGA----HKYERKVKEMTYQAEEDH 1862
Query: 217 KKIYGKQSMVDEVSGKVLEMDISKKKALQQKDIHKKIKQNESATDEINHQSLIQSKKKVH 276
K I Q +VD++ KV K K+ +E + L + ++ H
Sbjct: 1863 KNILRLQDLVDKLQAKV-----------------KSYKRQAEEAEEQANTQLSRCRRVQH 1905
Query: 277 KPKKDGETKDVEHSR 291
+ ++ E D+ S+
Sbjct: 1906 ELEEAAERADIAESQ 1920
>gi|110815815 centlein isoform 1 [Homo sapiens]
Length = 1406
Score = 32.7 bits (73), Expect = 1.2
Identities = 28/131 (21%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Query: 189 ETIEGALCKDGRFRSDIGEFEW---KLKEGHKKIYGKQSMVDEVSGKVLEMDISKKKALQ 245
E +E L K + + FE KLKEG+KK+ + + + + E +++K L+
Sbjct: 685 EMLEQTLQKVTELENRLKSFEKRSRKLKEGNKKLMKENDFLKSLLKQQQEDTETREKELE 744
Query: 246 QKDIHKKIKQNESATDEINHQSLIQSKKKVHKPKKDGETKDVEHSREQILPPQDLSHYIK 305
Q I K K E E+ + + ++ E + + E+++ P + SH
Sbjct: 745 Q--IIKGSKDVEKENTELQVKISELETEVTSLRRQVAEANALRNENEELINPMEKSHQSA 802
Query: 306 DKTRQTIPRIR 316
D+ + + ++
Sbjct: 803 DRAKSEMATMK 813
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,976,823
Number of Sequences: 37866
Number of extensions: 1315728
Number of successful extensions: 4022
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 3929
Number of HSP's gapped (non-prelim): 143
length of query: 704
length of database: 18,247,518
effective HSP length: 109
effective length of query: 595
effective length of database: 14,120,124
effective search space: 8401473780
effective search space used: 8401473780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.