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Search of human proteins with 218083730
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|218083730 zinc finger protein 237 isoform 3 [Homo sapiens]
(669 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|218083730 zinc finger protein 237 isoform 3 [Homo sapiens] 1366 0.0
gi|89001100 zinc finger protein 237 isoform 1 [Homo sapiens] 704 0.0
gi|37574606 zinc finger protein 198 [Homo sapiens] 420 e-117
gi|4508011 zinc finger protein 198 [Homo sapiens] 420 e-117
gi|89001102 zinc finger protein 237 isoform 2 [Homo sapiens] 397 e-110
gi|42475941 zinc finger protein 261 [Homo sapiens] 161 2e-39
gi|4827067 zinc finger protein 261 [Homo sapiens] 161 2e-39
gi|44890068 zinc finger protein 262 [Homo sapiens] 161 2e-39
gi|113205089 zinc finger, MYM domain containing 1 [Homo sapiens] 149 6e-36
gi|115511046 zinc finger protein 258 [Homo sapiens] 119 1e-26
gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens] 38 0.026
gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens] 38 0.026
gi|116014332 zinc finger protein 195 isoform 3 [Homo sapiens] 38 0.026
gi|46094072 zinc finger protein 770 [Homo sapiens] 38 0.035
gi|62953127 polyhomeotic 1-like [Homo sapiens] 37 0.059
gi|4506755 retinoid X receptor, alpha [Homo sapiens] 36 0.10
gi|169214831 PREDICTED: zinc finger protein 840 [Homo sapiens] 35 0.29
gi|169215032 PREDICTED: zinc finger protein 840 [Homo sapiens] 35 0.29
gi|169214556 PREDICTED: zinc finger protein 840 [Homo sapiens] 35 0.29
gi|4826686 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Homo sapiens] 34 0.38
gi|117956403 rabaptin, RAB GTPase binding effector protein 2 [Ho... 34 0.38
gi|116256449 zinc finger protein 254 [Homo sapiens] 34 0.50
gi|209862791 zinc finger protein 90 [Homo sapiens] 33 0.85
gi|148727251 zinc finger protein 81 [Homo sapiens] 33 0.85
gi|40807465 zinc finger protein 341 [Homo sapiens] 33 0.85
gi|226246537 zinc finger protein 407 isoform 3 [Homo sapiens] 33 1.1
gi|226246535 zinc finger protein 407 isoform 2 [Homo sapiens] 33 1.1
gi|134133288 zinc finger protein 407 isoform 1 [Homo sapiens] 33 1.1
gi|237681196 FEZ family zinc finger 1 isoform 2 [Homo sapiens] 32 1.9
gi|237681194 FEZ family zinc finger 1 isoform 1 [Homo sapiens] 32 1.9
>gi|218083730 zinc finger protein 237 isoform 3 [Homo sapiens]
Length = 669
Score = 1366 bits (3536), Expect = 0.0
Identities = 669/669 (100%), Positives = 669/669 (100%)
Query: 1 MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVSRSRNSPVEDDDDDDDV 60
MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVSRSRNSPVEDDDDDDDV
Sbjct: 1 MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVSRSRNSPVEDDDDDDDV 60
Query: 61 VFIESIQPPSISAPAIADQRNFIFASSKNEKPQGNYSVIPPSSRDLASQKGNISETIVID 120
VFIESIQPPSISAPAIADQRNFIFASSKNEKPQGNYSVIPPSSRDLASQKGNISETIVID
Sbjct: 61 VFIESIQPPSISAPAIADQRNFIFASSKNEKPQGNYSVIPPSSRDLASQKGNISETIVID 120
Query: 121 DEEDIETNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSLSRSKTKTGVRPFNPGRMNVA 180
DEEDIETNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSLSRSKTKTGVRPFNPGRMNVA
Sbjct: 121 DEEDIETNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSLSRSKTKTGVRPFNPGRMNVA 180
Query: 181 GDLFQNGEFATHHSPDSWISQSASFPSNQKQPGVDSLSPVALLRKQNFQPTAQQQLTKPA 240
GDLFQNGEFATHHSPDSWISQSASFPSNQKQPGVDSLSPVALLRKQNFQPTAQQQLTKPA
Sbjct: 181 GDLFQNGEFATHHSPDSWISQSASFPSNQKQPGVDSLSPVALLRKQNFQPTAQQQLTKPA 240
Query: 241 KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANV 300
KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANV
Sbjct: 241 KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANV 300
Query: 301 ILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKSRCTICSKLAEIRHEVSVNNVTHKL 360
ILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKSRCTICSKLAEIRHEVSVNNVTHKL
Sbjct: 301 ILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKSRCTICSKLAEIRHEVSVNNVTHKL 360
Query: 361 CSNHCFNKYRLANGLIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMME 420
CSNHCFNKYRLANGLIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMME
Sbjct: 361 CSNHCFNKYRLANGLIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMME 420
Query: 421 TKSKKLTASENRKRNAFREENEKQLYGSSNTLLKKIEGIPEKKEKTSQLQLSVECGTDTL 480
TKSKKLTASENRKRNAFREENEKQLYGSSNTLLKKIEGIPEKKEKTSQLQLSVECGTDTL
Sbjct: 421 TKSKKLTASENRKRNAFREENEKQLYGSSNTLLKKIEGIPEKKEKTSQLQLSVECGTDTL 480
Query: 481 LIQENVNLPPSSTSTIADTFQEQLEEKNFEDSIVPVVLSADPGTWPRILNIKQRDTLVEN 540
LIQENVNLPPSSTSTIADTFQEQLEEKNFEDSIVPVVLSADPGTWPRILNIKQRDTLVEN
Sbjct: 481 LIQENVNLPPSSTSTIADTFQEQLEEKNFEDSIVPVVLSADPGTWPRILNIKQRDTLVEN 540
Query: 541 VPPQVRNFNFPKDNTGRKFSETYYTRILPNGEKTTRSWLLYSTSKDSVFCLYCKLFGEGK 600
VPPQVRNFNFPKDNTGRKFSETYYTRILPNGEKTTRSWLLYSTSKDSVFCLYCKLFGEGK
Sbjct: 541 VPPQVRNFNFPKDNTGRKFSETYYTRILPNGEKTTRSWLLYSTSKDSVFCLYCKLFGEGK 600
Query: 601 NQLKNENGCKDWQHLSHILSKHEESEMHVNNSVKYSKLKSDLKKNKAIDAAEHRLYENEK 660
NQLKNENGCKDWQHLSHILSKHEESEMHVNNSVKYSKLKSDLKKNKAIDAAEHRLYENEK
Sbjct: 601 NQLKNENGCKDWQHLSHILSKHEESEMHVNNSVKYSKLKSDLKKNKAIDAAEHRLYENEK 660
Query: 661 NDGVLLLYT 669
NDGVLLLYT
Sbjct: 661 NDGVLLLYT 669
>gi|89001100 zinc finger protein 237 isoform 1 [Homo sapiens]
Length = 382
Score = 704 bits (1818), Expect = 0.0
Identities = 346/347 (99%), Positives = 347/347 (100%)
Query: 1 MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVSRSRNSPVEDDDDDDDV 60
MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVSRSRNSPVEDDDDDDDV
Sbjct: 1 MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVSRSRNSPVEDDDDDDDV 60
Query: 61 VFIESIQPPSISAPAIADQRNFIFASSKNEKPQGNYSVIPPSSRDLASQKGNISETIVID 120
VFIESIQPPSISAPAIADQRNFIFASSKNEKPQGNYSVIPPSSRDLASQKGNISETIVID
Sbjct: 61 VFIESIQPPSISAPAIADQRNFIFASSKNEKPQGNYSVIPPSSRDLASQKGNISETIVID 120
Query: 121 DEEDIETNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSLSRSKTKTGVRPFNPGRMNVA 180
DEEDIETNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSLSRSKTKTGVRPFNPGRMNVA
Sbjct: 121 DEEDIETNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSLSRSKTKTGVRPFNPGRMNVA 180
Query: 181 GDLFQNGEFATHHSPDSWISQSASFPSNQKQPGVDSLSPVALLRKQNFQPTAQQQLTKPA 240
GDLFQNGEFATHHSPDSWISQSASFPSNQKQPGVDSLSPVALLRKQNFQPTAQQQLTKPA
Sbjct: 181 GDLFQNGEFATHHSPDSWISQSASFPSNQKQPGVDSLSPVALLRKQNFQPTAQQQLTKPA 240
Query: 241 KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANV 300
KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANV
Sbjct: 241 KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANV 300
Query: 301 ILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKSRCTICSKLAEI 347
ILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKSRCTICSKLAE+
Sbjct: 301 ILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKSRCTICSKLAEV 347
>gi|37574606 zinc finger protein 198 [Homo sapiens]
Length = 1377
Score = 420 bits (1079), Expect = e-117
Identities = 206/295 (69%), Positives = 234/295 (79%), Gaps = 4/295 (1%)
Query: 157 TSSLSRSKTKTGVRPFNPGRMNVAGDLFQNGEFATHHSPDSWISQSASFPSNQKQPGVDS 216
T SL+ S+TKTGV PFNPGRMNVAGD+FQNGE ATHH+PDSWISQSASFP NQKQPGVDS
Sbjct: 245 TPSLT-SQTKTGVGPFNPGRMNVAGDVFQNGESATHHNPDSWISQSASFPRNQKQPGVDS 303
Query: 217 LSPVALLRKQNFQPTAQQQLTKPAKITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSF 276
LSPVA L KQ FQP+ QQQ TKP K+TCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSF
Sbjct: 304 LSPVASLPKQIFQPSVQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSF 363
Query: 277 SHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKS 336
SHK ++CKKD +T K ++ V+SS+SFQEF STSCLS E+ N KG NKS
Sbjct: 364 SHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQNPTKGALNKS 423
Query: 337 RCTICSKLAEIRHEVSVNNVTHKLCSNHCFNKYRLANGLIMNCCEHCGEYMPSKSTGNNI 396
RCTIC KL EIRHEVS N+THKLCS+HCFN+YR+ANGLIMNCCE CGEY+PSK GNN+
Sbjct: 424 RCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNV 483
Query: 397 LVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENRKRNAFREENEKQLYGSSNT 451
LVI GQQKRFCCQSC++EYKQ+ S L + +++F + EK YG T
Sbjct: 484 LVIDGQQKRFCCQSCVSEYKQVGSHPS-FLKEVRDHMQDSFLMQPEK--YGKLTT 535
Score = 210 bits (535), Expect = 3e-54
Identities = 110/169 (65%), Positives = 128/169 (75%)
Query: 1 MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVSRSRNSPVEDDDDDDDV 60
M+ SVGGLELT+QTP LLG+ AMATSL ++G+SF PA PLVSRS +DDDDV
Sbjct: 1 MDTSSVGGLELTDQTPVLLGSTAMATSLTNVGNSFSGPANPLVSRSNKFQNSSVEDDDDV 60
Query: 61 VFIESIQPPSISAPAIADQRNFIFASSKNEKPQGNYSVIPPSSRDLASQKGNISETIVID 120
VFIE +QPP S P +ADQR F SSKNE+ QGN S I PSS++LASQKG++SETIVID
Sbjct: 61 VFIEPVQPPPPSVPVVADQRTITFTSSKNEELQGNDSKITPSSKELASQKGSVSETIVID 120
Query: 121 DEEDIETNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSLSRSKTKTGV 169
DEED+ETN G EK SS FIE P TKN+TND+DFSTSS SRSK G+
Sbjct: 121 DEEDMETNQGQEKNSSNFIERRPPETKNRTNDVDFSTSSFSRSKVNAGM 169
Score = 45.1 bits (105), Expect = 2e-04
Identities = 50/237 (21%), Positives = 86/237 (36%), Gaps = 18/237 (7%)
Query: 218 SPVALLRKQNFQPTAQQQLTKPAKIT--CANCKKPLQKGQTAYQRKGSAHLFCSTTCLSS 275
S VA + + Q + Q P+ I C CK + + H FCS TC
Sbjct: 611 SCVAKFQALSMQSSPNGQFVAPSDIQLKCNYCKNSFCSKPEILEWENKVHQFCSKTCSDD 670
Query: 276 FSHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNK 335
+ T C+++ + + V S + F S C + ++ + G+
Sbjct: 671 YKKLHCIVTYCEYCQEEKTLHET-----VNFSGVKRPFCSEGCKLLYKQDFARRLGL-RC 724
Query: 336 SRCTICSKLAEIRHEVSVNNVTHKLCSNHCFNKYR--LANGLIMNCCEHCGEYMPSKSTG 393
C CS+L + ++ V CS C K++ +CC+ S+ T
Sbjct: 725 VTCNYCSQLCKKGATKELDGVVRDFCSEDCCKKFQDWYYKAARCDCCK-------SQGTL 777
Query: 394 NNILVIGGQQKRFCCQSC-INEYKQMMETKSKKLTASENRKRNAFREENEKQLYGSS 449
+ G+ K FC Q C + Y Q E EN + + + ++ GS+
Sbjct: 778 KERVQWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQTSRTKMTGSA 834
Score = 39.3 bits (90), Expect = 0.012
Identities = 40/176 (22%), Positives = 63/176 (35%), Gaps = 43/176 (24%)
Query: 242 ITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANVI 301
I C CK+ A G + FC+++C++ F
Sbjct: 582 IICHFCKRNSLPQYQATMPDGKLYNFCNSSCVAKFQ-----------------------A 618
Query: 302 LPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKSRCTICSKLAEIRHEVSVNNVTHKLC 361
L ++SS + Q + C N + + CSK + E N H+ C
Sbjct: 619 LSMQSSPNGQFVAPSDIQLKC-----------NYCKNSFCSKPEILEWE----NKVHQFC 663
Query: 362 SNHCFNKYRLANGLIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQ 417
S C + Y+ + I+ CE+C E T N G ++ FC + C YKQ
Sbjct: 664 SKTCSDDYKKLH-CIVTYCEYCQEEKTLHETVN----FSGVKRPFCSEGCKLLYKQ 714
>gi|4508011 zinc finger protein 198 [Homo sapiens]
Length = 1377
Score = 420 bits (1079), Expect = e-117
Identities = 206/295 (69%), Positives = 234/295 (79%), Gaps = 4/295 (1%)
Query: 157 TSSLSRSKTKTGVRPFNPGRMNVAGDLFQNGEFATHHSPDSWISQSASFPSNQKQPGVDS 216
T SL+ S+TKTGV PFNPGRMNVAGD+FQNGE ATHH+PDSWISQSASFP NQKQPGVDS
Sbjct: 245 TPSLT-SQTKTGVGPFNPGRMNVAGDVFQNGESATHHNPDSWISQSASFPRNQKQPGVDS 303
Query: 217 LSPVALLRKQNFQPTAQQQLTKPAKITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSF 276
LSPVA L KQ FQP+ QQQ TKP K+TCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSF
Sbjct: 304 LSPVASLPKQIFQPSVQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSF 363
Query: 277 SHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKS 336
SHK ++CKKD +T K ++ V+SS+SFQEF STSCLS E+ N KG NKS
Sbjct: 364 SHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQNPTKGALNKS 423
Query: 337 RCTICSKLAEIRHEVSVNNVTHKLCSNHCFNKYRLANGLIMNCCEHCGEYMPSKSTGNNI 396
RCTIC KL EIRHEVS N+THKLCS+HCFN+YR+ANGLIMNCCE CGEY+PSK GNN+
Sbjct: 424 RCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNV 483
Query: 397 LVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENRKRNAFREENEKQLYGSSNT 451
LVI GQQKRFCCQSC++EYKQ+ S L + +++F + EK YG T
Sbjct: 484 LVIDGQQKRFCCQSCVSEYKQVGSHPS-FLKEVRDHMQDSFLMQPEK--YGKLTT 535
Score = 210 bits (535), Expect = 3e-54
Identities = 110/169 (65%), Positives = 128/169 (75%)
Query: 1 MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVSRSRNSPVEDDDDDDDV 60
M+ SVGGLELT+QTP LLG+ AMATSL ++G+SF PA PLVSRS +DDDDV
Sbjct: 1 MDTSSVGGLELTDQTPVLLGSTAMATSLTNVGNSFSGPANPLVSRSNKFQNSSVEDDDDV 60
Query: 61 VFIESIQPPSISAPAIADQRNFIFASSKNEKPQGNYSVIPPSSRDLASQKGNISETIVID 120
VFIE +QPP S P +ADQR F SSKNE+ QGN S I PSS++LASQKG++SETIVID
Sbjct: 61 VFIEPVQPPPPSVPVVADQRTITFTSSKNEELQGNDSKITPSSKELASQKGSVSETIVID 120
Query: 121 DEEDIETNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSLSRSKTKTGV 169
DEED+ETN G EK SS FIE P TKN+TND+DFSTSS SRSK G+
Sbjct: 121 DEEDMETNQGQEKNSSNFIERRPPETKNRTNDVDFSTSSFSRSKVNAGM 169
Score = 45.1 bits (105), Expect = 2e-04
Identities = 50/237 (21%), Positives = 86/237 (36%), Gaps = 18/237 (7%)
Query: 218 SPVALLRKQNFQPTAQQQLTKPAKIT--CANCKKPLQKGQTAYQRKGSAHLFCSTTCLSS 275
S VA + + Q + Q P+ I C CK + + H FCS TC
Sbjct: 611 SCVAKFQALSMQSSPNGQFVAPSDIQLKCNYCKNSFCSKPEILEWENKVHQFCSKTCSDD 670
Query: 276 FSHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNK 335
+ T C+++ + + V S + F S C + ++ + G+
Sbjct: 671 YKKLHCIVTYCEYCQEEKTLHET-----VNFSGVKRPFCSEGCKLLYKQDFARRLGL-RC 724
Query: 336 SRCTICSKLAEIRHEVSVNNVTHKLCSNHCFNKYR--LANGLIMNCCEHCGEYMPSKSTG 393
C CS+L + ++ V CS C K++ +CC+ S+ T
Sbjct: 725 VTCNYCSQLCKKGATKELDGVVRDFCSEDCCKKFQDWYYKAARCDCCK-------SQGTL 777
Query: 394 NNILVIGGQQKRFCCQSC-INEYKQMMETKSKKLTASENRKRNAFREENEKQLYGSS 449
+ G+ K FC Q C + Y Q E EN + + + ++ GS+
Sbjct: 778 KERVQWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQTSRTKMTGSA 834
Score = 39.3 bits (90), Expect = 0.012
Identities = 40/176 (22%), Positives = 63/176 (35%), Gaps = 43/176 (24%)
Query: 242 ITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANVI 301
I C CK+ A G + FC+++C++ F
Sbjct: 582 IICHFCKRNSLPQYQATMPDGKLYNFCNSSCVAKFQ-----------------------A 618
Query: 302 LPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKSRCTICSKLAEIRHEVSVNNVTHKLC 361
L ++SS + Q + C N + + CSK + E N H+ C
Sbjct: 619 LSMQSSPNGQFVAPSDIQLKC-----------NYCKNSFCSKPEILEWE----NKVHQFC 663
Query: 362 SNHCFNKYRLANGLIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQ 417
S C + Y+ + I+ CE+C E T N G ++ FC + C YKQ
Sbjct: 664 SKTCSDDYKKLH-CIVTYCEYCQEEKTLHETVN----FSGVKRPFCSEGCKLLYKQ 714
>gi|89001102 zinc finger protein 237 isoform 2 [Homo sapiens]
Length = 208
Score = 397 bits (1019), Expect = e-110
Identities = 195/196 (99%), Positives = 196/196 (100%)
Query: 1 MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVSRSRNSPVEDDDDDDDV 60
MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVSRSRNSPVEDDDDDDDV
Sbjct: 1 MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVSRSRNSPVEDDDDDDDV 60
Query: 61 VFIESIQPPSISAPAIADQRNFIFASSKNEKPQGNYSVIPPSSRDLASQKGNISETIVID 120
VFIESIQPPSISAPAIADQRNFIFASSKNEKPQGNYSVIPPSSRDLASQKGNISETIVID
Sbjct: 61 VFIESIQPPSISAPAIADQRNFIFASSKNEKPQGNYSVIPPSSRDLASQKGNISETIVID 120
Query: 121 DEEDIETNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSLSRSKTKTGVRPFNPGRMNVA 180
DEEDIETNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSLSRSKTKTGVRPFNPGRMNVA
Sbjct: 121 DEEDIETNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSLSRSKTKTGVRPFNPGRMNVA 180
Query: 181 GDLFQNGEFATHHSPD 196
GDLFQNGEFATHHSP+
Sbjct: 181 GDLFQNGEFATHHSPE 196
>gi|42475941 zinc finger protein 261 [Homo sapiens]
Length = 1370
Score = 161 bits (408), Expect = 2e-39
Identities = 82/183 (44%), Positives = 111/183 (60%), Gaps = 6/183 (3%)
Query: 241 KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANV 300
K+TCA+C+ PLQKGQTAYQRKG LFCS++CL++FS K + CKK+ K +V
Sbjct: 308 KMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEIWNTKDSV 367
Query: 301 ILPVESSKSFQEFYSTSCLSPCENNWN----LKKGVFNKSRCTICSKLAEIRHEVSVNNV 356
+ S SF EF ++ CLS E + +RC+IC K E+ HEVS +V
Sbjct: 368 VAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLHEVSNGSV 427
Query: 357 THKLCSNHCFNKYRLANGLIMNCCEHCGEYMPSK--STGNNILVIGGQQKRFCCQSCINE 414
H+LCS+ CF+K+R GL NCC+ CG Y+ +K S G +L GQQKRFC +C+
Sbjct: 428 VHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFCNTTCLGA 487
Query: 415 YKQ 417
YK+
Sbjct: 488 YKK 490
Score = 51.6 bits (122), Expect = 2e-06
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 261 KGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLS 320
+G FC+TTCL ++ K T+ + CK K ++ V+ + F C
Sbjct: 473 EGQQKRFCNTTCLGAYKKKNTRVYPCVWCK--TLCKNFEMLSHVDRNGKTSLF----CSL 526
Query: 321 PCENNWNLKK-GVFNKSR-CTICSK-LAEIRHEVSVNNVTHKLCSNHCFNKYRLAN--GL 375
C ++ +K+ G+ R C+ C + L++ + V+ ++ CS C+ K++ + G
Sbjct: 527 CCTTSYKVKQAGLTGPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGG 586
Query: 376 IMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQM 418
I C +C K +L Q +FCC+ C ++K++
Sbjct: 587 IHLSCHYCHSLFSGKP---EVLDWQDQVFQFCCRDCCEDFKRL 626
Score = 42.4 bits (98), Expect = 0.001
Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 17/163 (10%)
Query: 260 RKGSAHLFCSTTCLSSFSHKRTQNT----RSIICKKDASTKKANVILPVESSKSFQEFYS 315
R G LFCS C +S+ K+ T C++ S + + ++ +F S
Sbjct: 516 RNGKTSLFCSLCCTTSYKVKQAGLTGPPRPCSFCRRSLS----DPCYYNKVDRTVYQFCS 571
Query: 316 TSCLSPCENNWNLKKGVFNKSRCTICSKLAEIRHEV-SVNNVTHKLCSNHCFNKYRLANG 374
SC + + +G + S C C L + EV + + C C ++ G
Sbjct: 572 PSCWTKFQR--TSPEGGIHLS-CHYCHSLFSGKPEVLDWQDQVFQFCCRDCCEDFKRLRG 628
Query: 375 LIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQ 417
++ CEHC + + + L G +K FC + C+ YKQ
Sbjct: 629 VVSQ-CEHCRQ----EKLLHEKLRFSGVEKSFCSEGCVLLYKQ 666
Score = 36.6 bits (83), Expect = 0.077
Identities = 49/224 (21%), Positives = 81/224 (36%), Gaps = 37/224 (16%)
Query: 267 FCSTTCLSSFSHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLSPCENNW 326
FC C F R ++ C+++ + VE S F S C+ + ++
Sbjct: 614 FCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKS-----FCSEGCVLLYKQDF 668
Query: 327 NLKKGVFNKSRCTICSKLAEIRHEVSVNNVTHKLCSNHCFNKYRLANGLIMNC--CEHCG 384
K G+ + CT CS+ + ++ T CS C +KY L C C+ G
Sbjct: 669 TKKLGLCCIT-CTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARCHACKRQG 727
Query: 385 EYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENRKRNAFREENEKQ 444
+ + + + GQ + FC Q C+ + S+ + N + +
Sbjct: 728 KLLET-------IHWRGQIRHFCNQQCLLRF------------YSQQNQPNLDTQSGPES 768
Query: 445 LYGSSNTLLKKIEGIPEKKEKTSQLQLSVECGTDTLLIQENVNL 488
L S + PE K +T Q VE +EN NL
Sbjct: 769 LLNSQS---------PESKPQTPS-QTKVENSNTVRTPEENGNL 802
>gi|4827067 zinc finger protein 261 [Homo sapiens]
Length = 1370
Score = 161 bits (408), Expect = 2e-39
Identities = 82/183 (44%), Positives = 111/183 (60%), Gaps = 6/183 (3%)
Query: 241 KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANV 300
K+TCA+C+ PLQKGQTAYQRKG LFCS++CL++FS K + CKK+ K +V
Sbjct: 308 KMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGKKTCTFCKKEIWNTKDSV 367
Query: 301 ILPVESSKSFQEFYSTSCLSPCENNWN----LKKGVFNKSRCTICSKLAEIRHEVSVNNV 356
+ S SF EF ++ CLS E + +RC+IC K E+ HEVS +V
Sbjct: 368 VAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLHEVSNGSV 427
Query: 357 THKLCSNHCFNKYRLANGLIMNCCEHCGEYMPSK--STGNNILVIGGQQKRFCCQSCINE 414
H+LCS+ CF+K+R GL NCC+ CG Y+ +K S G +L GQQKRFC +C+
Sbjct: 428 VHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFCNTTCLGA 487
Query: 415 YKQ 417
YK+
Sbjct: 488 YKK 490
Score = 51.6 bits (122), Expect = 2e-06
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 261 KGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLS 320
+G FC+TTCL ++ K T+ + CK K ++ V+ + F C
Sbjct: 473 EGQQKRFCNTTCLGAYKKKNTRVYPCVWCK--TLCKNFEMLSHVDRNGKTSLF----CSL 526
Query: 321 PCENNWNLKK-GVFNKSR-CTICSK-LAEIRHEVSVNNVTHKLCSNHCFNKYRLAN--GL 375
C ++ +K+ G+ R C+ C + L++ + V+ ++ CS C+ K++ + G
Sbjct: 527 CCTTSYKVKQAGLTGPPRPCSFCRRSLSDPCYYNKVDRTVYQFCSPSCWTKFQRTSPEGG 586
Query: 376 IMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQM 418
I C +C K +L Q +FCC+ C ++K++
Sbjct: 587 IHLSCHYCHSLFSGKP---EVLDWQDQVFQFCCRDCCEDFKRL 626
Score = 42.4 bits (98), Expect = 0.001
Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 17/163 (10%)
Query: 260 RKGSAHLFCSTTCLSSFSHKRTQNT----RSIICKKDASTKKANVILPVESSKSFQEFYS 315
R G LFCS C +S+ K+ T C++ S + + ++ +F S
Sbjct: 516 RNGKTSLFCSLCCTTSYKVKQAGLTGPPRPCSFCRRSLS----DPCYYNKVDRTVYQFCS 571
Query: 316 TSCLSPCENNWNLKKGVFNKSRCTICSKLAEIRHEV-SVNNVTHKLCSNHCFNKYRLANG 374
SC + + +G + S C C L + EV + + C C ++ G
Sbjct: 572 PSCWTKFQR--TSPEGGIHLS-CHYCHSLFSGKPEVLDWQDQVFQFCCRDCCEDFKRLRG 628
Query: 375 LIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQ 417
++ CEHC + + + L G +K FC + C+ YKQ
Sbjct: 629 VVSQ-CEHCRQ----EKLLHEKLRFSGVEKSFCSEGCVLLYKQ 666
Score = 36.6 bits (83), Expect = 0.077
Identities = 49/224 (21%), Positives = 81/224 (36%), Gaps = 37/224 (16%)
Query: 267 FCSTTCLSSFSHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLSPCENNW 326
FC C F R ++ C+++ + VE S F S C+ + ++
Sbjct: 614 FCCRDCCEDFKRLRGVVSQCEHCRQEKLLHEKLRFSGVEKS-----FCSEGCVLLYKQDF 668
Query: 327 NLKKGVFNKSRCTICSKLAEIRHEVSVNNVTHKLCSNHCFNKYRLANGLIMNC--CEHCG 384
K G+ + CT CS+ + ++ T CS C +KY L C C+ G
Sbjct: 669 TKKLGLCCIT-CTYCSQTCQRGVTEQLDGSTWDFCSEDCKSKYLLWYCKAARCHACKRQG 727
Query: 385 EYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENRKRNAFREENEKQ 444
+ + + + GQ + FC Q C+ + S+ + N + +
Sbjct: 728 KLLET-------IHWRGQIRHFCNQQCLLRF------------YSQQNQPNLDTQSGPES 768
Query: 445 LYGSSNTLLKKIEGIPEKKEKTSQLQLSVECGTDTLLIQENVNL 488
L S + PE K +T Q VE +EN NL
Sbjct: 769 LLNSQS---------PESKPQTPS-QTKVENSNTVRTPEENGNL 802
>gi|44890068 zinc finger protein 262 [Homo sapiens]
Length = 1548
Score = 161 bits (408), Expect = 2e-39
Identities = 101/232 (43%), Positives = 132/232 (56%), Gaps = 30/232 (12%)
Query: 218 SPVALLRKQNFQPT-AQQQLTK-----PA---KITCANCKKPLQKGQTAYQRKGSAHLFC 268
SP+A FQP+ A + K PA +++C+ CKK LQKGQTAYQRKGS LFC
Sbjct: 306 SPLAPQLTTGFQPSLASSGMNKMLPSVPATAVRVSCSGCKKILQKGQTAYQRKGSTQLFC 365
Query: 269 STTCLSSFS-------HKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLSP 321
ST CL+ ++ T+ T S C KD K + E++ + ++F S SCLS
Sbjct: 366 STLCLTGYTVPPARPPPPLTKKTCSS-CSKDILNPKDVISAQFENTTTSKDFCSQSCLST 424
Query: 322 CENNWNLKKGVFN------KSRCTICSKLAEIRHEVSVNNVTHKLCSNHCFNKYRLANGL 375
E KK + ++C++C K A IRHEV+ NV HKLCS+ CF+K+R AN L
Sbjct: 425 YELK---KKPIVTINTNSISTKCSMCQKNAVIRHEVNYQNVVHKLCSDACFSKFRSANNL 481
Query: 376 IMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLT 427
MNCCE+CG Y S S ++L I GQ K+FC SCI YKQ KS K+T
Sbjct: 482 TMNCCENCGGYCYSGSGQCHMLQIEGQSKKFCSSSCITAYKQ----KSAKIT 529
Score = 42.4 bits (98), Expect = 0.001
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 244 CANCKKPLQKGQTA---YQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANV 300
C NC G Q +G + FCS++C++++ K + T +CK S+ A +
Sbjct: 486 CENCGGYCYSGSGQCHMLQIEGQSKKFCSSSCITAYKQKSAKITPCALCKSLRSS--AEM 543
Query: 301 ILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKSRCTICSKLAEIRHEVSVNNVT-HK 359
I S + F S +CLS GV + +C C A ++ +++++ +
Sbjct: 544 IENTNSLGKTELFCSVNCLSAYRVKMVTSAGV--QVQCNSCKTSAIPQYHLAMSDGSIRN 601
Query: 360 LCSNHC-------FNKYRLANGLIMNCCEHCGEYMPSKSTGNNILVIGG 401
CS C FNK N ++ + G+ + S TG+ + GG
Sbjct: 602 FCSYSCVVAFQNLFNKPTGMNSSVVPLSQ--GQVIVSIPTGSTVSAGGG 648
Score = 39.3 bits (90), Expect = 0.012
Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 25/179 (13%)
Query: 241 KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSI--ICKKDASTKKA 298
K+ C +C + KG FC C S +K+ N ++ CK + K+
Sbjct: 684 KLKCQHCNRLFATKPELLDYKGKMFQFCGKNC--SDEYKKINNVMAMCEYCKIEKIVKET 741
Query: 299 NVILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKSRCTICSKLAEIRHEVSVNNVTH 358
V S + + F S C +++ + G + C +CS + ++ NN+
Sbjct: 742 -----VRFSGADKSFCSEGCKLLYKHDLAKRWG----NHCKMCSYCLQTSPKLVQNNLGG 792
Query: 359 KL---CSNHCFNKYRLANGLIMNC--CEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCI 412
K+ C C +KY + + C C+ G+ S L G+ K FC CI
Sbjct: 793 KVEEFCCEECMSKYTVLFYQMAKCDACKRQGKLSES-------LKWRGEMKHFCNLLCI 844
Score = 38.1 bits (87), Expect = 0.026
Identities = 46/242 (19%), Positives = 87/242 (35%), Gaps = 60/242 (24%)
Query: 241 KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANV 300
++ C +CK GS FCS +C+ +F + + T S + V
Sbjct: 576 QVQCNSCKTSAIPQYHLAMSDGSIRNFCSYSCVVAFQNLFNKPTGMNSSVVPLSQGQVIV 635
Query: 301 ILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFN---------------KSRCTICSKLA 345
+P S+ S STS +SP + + G+ K +C C++L
Sbjct: 636 SIPTGSTVSAGGG-STSAVSPTSISSSAAAGLQRLAAQSQHVGFARSVVKLKCQHCNRLF 694
Query: 346 EIRHEV-SVNNVTHKLCSNHCFNKYRLANGLIMNCCEHCG-------------------- 384
+ E+ + C +C ++Y+ N +M CE+C
Sbjct: 695 ATKPELLDYKGKMFQFCGKNCSDEYKKINN-VMAMCEYCKIEKIVKETVRFSGADKSFCS 753
Query: 385 -------EYMPSKSTGNNILV---------------IGGQQKRFCCQSCINEYKQMMETK 422
++ +K GN+ + +GG+ + FCC+ C+++Y +
Sbjct: 754 EGCKLLYKHDLAKRWGNHCKMCSYCLQTSPKLVQNNLGGKVEEFCCEECMSKYTVLFYQM 813
Query: 423 SK 424
+K
Sbjct: 814 AK 815
>gi|113205089 zinc finger, MYM domain containing 1 [Homo sapiens]
Length = 1142
Score = 149 bits (377), Expect = 6e-36
Identities = 124/441 (28%), Positives = 188/441 (42%), Gaps = 46/441 (10%)
Query: 237 TKPAKITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTQNTRS----IICKKD 292
T +++CA CKK LQKGQTAYQRKGSA LFCS C++ + + S C KD
Sbjct: 82 TTAIQVSCAGCKKILQKGQTAYQRKGSAQLFCSIPCITEYISSASSPVPSKRTCSNCSKD 141
Query: 293 ASTKKANVILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKS---RCTICSKLAEIRH 349
K + + +E + S + F S SCLS E + S +C++C K A I++
Sbjct: 142 ILNPKDVISVQLEDTTSCKTFCSLSCLSSYEEKRKPFVTICTNSILTKCSMCQKTAIIQY 201
Query: 350 EVSVNNVTHKLCSNHCFNKYRLANGLIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQ 409
EV NV H LCSN C +K+ AN IMNCCE+CG Y + S+ ++IL + GQ F
Sbjct: 202 EVKYQNVKHNLCSNACLSKFHSANNFIMNCCENCGTYCYTSSSLSHILQMEGQSHYFNSS 261
Query: 410 SCINEYKQ-------------------MMETKSKKLTASENRKRNAFREENEKQLYGSSN 450
I YKQ M+ET S N F ++ ++ SS
Sbjct: 262 KSITAYKQKPAKPLISVPCKPLKPSDEMIETTSDLGKTELFCSINCFSAYSKAKMESSSV 321
Query: 451 TLLKKI-----EGIPEKKEKTSQLQLSVE-CGTDTLLIQENVNL---PPSSTSTIADTFQ 501
+++ + E + KK+ T + V TD L N ++ SS + AD
Sbjct: 322 SVVSVVHDTSTELLSPKKDTTPVISNIVSLADTDVALPIMNTDVLQDTVSSVTATADVIV 381
Query: 502 EQLEEKNFEDSIVPVVLSADPGTWPRILNIKQRDTLVENVPPQVRNFNFPK--DNTGRKF 559
+ + E S S + + ++ + + + Q N K D
Sbjct: 382 DLSKSSPSEPSNAVASSSTEQPSVSPSSSVFSQHAIGSSTEVQKDNMKSMKISDELCHPK 441
Query: 560 SETYYTRILPNGEKTTRSW-----LLYSTSKDSVFCLYCKLFGEGKNQLKNE----NGCK 610
+ ++ +S L ++ KD FC C+LF + E +G
Sbjct: 442 CTSKVQKVKGKSRSIKKSCCADFECLENSKKDVAFCYSCQLFCQKYFSCGRESFATHGTS 501
Query: 611 DWQHLSHILSKHEESEMHVNN 631
+W+ KHE+SEMH+ +
Sbjct: 502 NWKKTLEKFRKHEKSEMHLKS 522
>gi|115511046 zinc finger protein 258 [Homo sapiens]
Length = 1325
Score = 119 bits (297), Expect = 1e-26
Identities = 66/162 (40%), Positives = 86/162 (53%), Gaps = 15/162 (9%)
Query: 241 KITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSH--------KRTQNTRSIICKKD 292
K+ C+ CKK L KGQTAY + GS LFCST C++ S K+T C KD
Sbjct: 89 KVFCSGCKKMLYKGQTAYHKTGSTQLFCSTRCITRHSSPACLPPPPKKTCTN----CSKD 144
Query: 293 ASTKKANVILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKS---RCTICSKLAEIRH 349
K + E+S ++F S SCLS E ++ KS +C++C K A+ R
Sbjct: 145 ILNPKDVITTRFENSYPSKDFCSQSCLSSYELKKKPVVTIYTKSISTKCSMCQKNADTRF 204
Query: 350 EVSVNNVTHKLCSNHCFNKYRLANGLIMNCCEHCGEYMPSKS 391
EV NV H LCS+ CF+K+ N L MNCCE+CG Y S S
Sbjct: 205 EVKYQNVVHGLCSDACFSKFHSTNNLTMNCCENCGSYCYSSS 246
Score = 52.4 bits (124), Expect = 1e-06
Identities = 60/245 (24%), Positives = 96/245 (39%), Gaps = 48/245 (19%)
Query: 236 LTKPAKITCANCKK----PLQKGQTAYQRKGSAHLFCSTTCLSSFSHKR----TQNTRSI 287
L P K TC NC K P T ++ + FCS +CLSS+ K+ T T+SI
Sbjct: 130 LPPPPKKTCTNCSKDILNPKDVITTRFENSYPSKDFCSQSCLSSYELKKKPVVTIYTKSI 189
Query: 288 -----ICKKDAST----KKANVILPVESSKSFQEFYSTSCLSP--CENNWNL-------- 328
+C+K+A T K NV+ + S F +F+ST+ L+ CEN +
Sbjct: 190 STKCSMCQKNADTRFEVKYQNVVHGLCSDACFSKFHSTNNLTMNCCENCGSYCYSSSGPC 249
Query: 329 -KKGVFNKSRCTICSK----------------LAEIRHEVSVNNVTHKLCSNHCFNKYRL 371
+ VF+ + T + AE+ + + T CS +C + YR+
Sbjct: 250 QSQKVFSSTSVTAYKQNSAQIPPYALGKSLRPSAEMIETTNDSGKTELFCSINCLSAYRV 309
Query: 372 ANGLIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCI----NEYKQMMETKSKKLT 427
C S ++ + G FC SC+ N + + T S +
Sbjct: 310 KTVTSSGVQVSCHSCKTSAIPQYHLAMSNGTIYSFCSSSCVVAFQNVFSKPKGTNSSAVP 369
Query: 428 ASENR 432
S+ +
Sbjct: 370 LSQGQ 374
Score = 42.7 bits (99), Expect = 0.001
Identities = 102/453 (22%), Positives = 160/453 (35%), Gaps = 52/453 (11%)
Query: 202 SASFPSNQKQPGVDSLSPVALLRKQNFQPTAQQQLTKPA-KITCANCKKPLQKGQTAYQR 260
SA PS+ + SL P+A + + Q LT K+ C +C
Sbjct: 394 SAVSPSSIRGSAAASLQPLA-------EQSQQVALTHTVVKLKCQHCNHLFATKPELLFY 446
Query: 261 KGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLS 320
KG LFC C + K CK K+ V S + F S C
Sbjct: 447 KGKMFLFCGKNCSDEYKKKNKVVAMCDYCKLQKIIKET-----VRFSGVDKPFCSEVCKF 501
Query: 321 PCENNWNLKKGVFNKSRCTICSKLAEIRHEVSVNNVTHKLCSNHCFNKYRLANGLIMNC- 379
++ + G + K C+ CS+ + E + + C C +K+ + + C
Sbjct: 502 LSARDFGERWGNYCK-MCSYCSQTSPNLVENRLEGKLEEFCCEDCMSKFTVLFYQMAKCD 560
Query: 380 -CEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEY--KQMMETKSKKLTASENRKRNA 436
C+ G+ S NI K FC C+ E+ +Q+M + + ++ + A
Sbjct: 561 GCKRQGKLSESIKWRGNI-------KHFCNLFCVLEFCHQQIMNDCLPQNKVNISKAKTA 613
Query: 437 FRE----ENEKQLYGSSNTLLKKIEGIPEKKEKTSQLQLSVECGTDTLL----IQENVNL 488
E + +S L KI S L+ +V ++ QE+
Sbjct: 614 VTELPSARTDTTPVITSVMSLAKIPATLSTGNTNSVLKGAVTKEAAKIIQDESTQEDAMK 673
Query: 489 PPSSTSTIADTFQEQLEEKNFEDSIVPVVLSADPGTWPRILNIK-QRDTLVENVPPQVRN 547
PSS S+ Q KN S PV + P + + Q D + N
Sbjct: 674 FPSSQSS-----QPSRLLKNKGISCKPVTQTKATSCKPHTQHKECQTDLPMPNEKNDAEL 728
Query: 548 FNFPKDNTGRKFSETYYTRILPNGEKTTRSWLLYSTSKDSVFCLYCKLFGEGKNQLKNEN 607
+ P F +TY T L G +++ SK+S C + GE L +EN
Sbjct: 729 DSPPSKKKRLGFFQTYDTEYLKVG------FIICPGSKESSPRPQCVICGE---ILSSEN 779
Query: 608 GCKDWQHLSHILSKHEESEMHVNNSVKYSKLKS 640
K H+ +KH E E N V + + KS
Sbjct: 780 -MKPANLSHHLKTKHSELE---NKPVDFFEQKS 808
Score = 37.7 bits (86), Expect = 0.035
Identities = 36/175 (20%), Positives = 64/175 (36%), Gaps = 22/175 (12%)
Query: 262 GSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLSP 321
G LFCS CLS++ K ++ + T S+ + F S+SC+
Sbjct: 293 GKTELFCSINCLSAYRVKTVTSSGVQVSCHSCKTSAIPQYHLAMSNGTIYSFCSSSCVVA 352
Query: 322 CENNWNLKKGVFNK----SRCTICSKLAEIRHEVSVNNVTHKLCSNHCFN---------- 367
+N ++ KG + S+ + R VS+ S
Sbjct: 353 FQNVFSKPKGTNSSAVPLSQGQVVVSPPSSRSAVSIGGGNTSAVSPSSIRGSAAASLQPL 412
Query: 368 -----KYRLANGLIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQ 417
+ L + ++ C+HC +K +L G+ FC ++C +EYK+
Sbjct: 413 AEQSQQVALTHTVVKLKCQHCNHLFATKP---ELLFYKGKMFLFCGKNCSDEYKK 464
>gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]
Length = 606
Score = 38.1 bits (87), Expect = 0.026
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 362 SNHCFNKYRLANGLIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMME- 420
S+H R+ G CE CG+ + S+ +N ++K + C+ C N +KQ+ +
Sbjct: 427 SSHLSEHRRIHTGEKPYQCEECGKVFRTCSSLSNHKRTHSEEKPYTCEECGNIFKQLSDL 486
Query: 421 TKSKKLTASENRKRNAFREENEKQLYGSSNTLLKKIEGIPEKKEKTSQLQLSVECG 476
TK KK E + +E K SSN ++ K EK K ECG
Sbjct: 487 TKHKKTHTGEKPYK---CDECGKNFTQSSNLIVHKRIHTGEKPYKCE------ECG 533
>gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]
Length = 629
Score = 38.1 bits (87), Expect = 0.026
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 362 SNHCFNKYRLANGLIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMME- 420
S+H R+ G CE CG+ + S+ +N ++K + C+ C N +KQ+ +
Sbjct: 450 SSHLSEHRRIHTGEKPYQCEECGKVFRTCSSLSNHKRTHSEEKPYTCEECGNIFKQLSDL 509
Query: 421 TKSKKLTASENRKRNAFREENEKQLYGSSNTLLKKIEGIPEKKEKTSQLQLSVECG 476
TK KK E + +E K SSN ++ K EK K ECG
Sbjct: 510 TKHKKTHTGEKPYK---CDECGKNFTQSSNLIVHKRIHTGEKPYKCE------ECG 556
>gi|116014332 zinc finger protein 195 isoform 3 [Homo sapiens]
Length = 557
Score = 38.1 bits (87), Expect = 0.026
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 362 SNHCFNKYRLANGLIMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMME- 420
S+H R+ G CE CG+ + S+ +N ++K + C+ C N +KQ+ +
Sbjct: 378 SSHLSEHRRIHTGEKPYQCEECGKVFRTCSSLSNHKRTHSEEKPYTCEECGNIFKQLSDL 437
Query: 421 TKSKKLTASENRKRNAFREENEKQLYGSSNTLLKKIEGIPEKKEKTSQLQLSVECG 476
TK KK E + +E K SSN ++ K EK K ECG
Sbjct: 438 TKHKKTHTGEKPYK---CDECGKNFTQSSNLIVHKRIHTGEKPYKCE------ECG 484
>gi|46094072 zinc finger protein 770 [Homo sapiens]
Length = 691
Score = 37.7 bits (86), Expect = 0.035
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Query: 377 MNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENRK--- 433
++ C CG+ PS+S + ++I Q+ F C C ++Q K +LT SE R
Sbjct: 159 IHACTICGKMFPSQSKLDRHVLIHTGQRPFKCVLCTKSFRQSTHLKIHQLTHSEERPFQC 218
Query: 434 ---RNAFREENEKQLYGSSNTLLKKIEGIPEKKEKTSQLQL 471
+ F+ +++ + +T K + KK +T L
Sbjct: 219 CFCQKGFKIQSKLLKHKQIHTRNKAFRALLLKKRRTESRPL 259
>gi|62953127 polyhomeotic 1-like [Homo sapiens]
Length = 1004
Score = 37.0 bits (84), Expect = 0.059
Identities = 39/157 (24%), Positives = 59/157 (37%), Gaps = 27/157 (17%)
Query: 380 CEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEY----KQMMETKSKKLTASENRKRN 435
CE+CG+Y P++ + KRFC +C Y K KK+ E ++ N
Sbjct: 800 CEYCGKYAPAEQFRGS--------KRFCSMTCAKRYNVSCSHQFRLKRKKM--KEFQEAN 849
Query: 436 AFREENEKQLYGSSNTLLKKIEGIPEKKEKTSQLQLSVECGTDTLLIQENVN-LPPSSTS 494
R SS+ KI+G + ++ S G+D E ++ P S
Sbjct: 850 YARVRRRGPRRSSSDIARAKIQGKCHRGQEDSSR------GSDNSSYDEALSPTSPGPLS 903
Query: 495 TIADTFQEQLEEKNFE------DSIVPVVLSADPGTW 525
A + L N I PV LS++P W
Sbjct: 904 VRAGHGERDLGNPNTAPPTPELHGINPVFLSSNPSRW 940
>gi|4506755 retinoid X receptor, alpha [Homo sapiens]
Length = 462
Score = 36.2 bits (82), Expect = 0.10
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 402 QQKRFCCQSCINEYKQMMETKSKKLTASENRKRNAFREENEKQLYGSSNTLLKKIEGIPE 461
+++R CQ C Y++ + K+ E R+R R ENE + S+N E +P
Sbjct: 181 KRQRNRCQYC--RYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSAN------EDMP- 231
Query: 462 KKEKTSQLQLSVECGTDTLLIQENVNLPPSS 492
E+ + +L+VE T+T ++ N+ L PSS
Sbjct: 232 -VERILEAELAVEPKTET-YVEANMGLNPSS 260
>gi|169214831 PREDICTED: zinc finger protein 840 [Homo sapiens]
Length = 980
Score = 34.7 bits (78), Expect = 0.29
Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 16/114 (14%)
Query: 337 RCTICSKLAEIRHEVSVNNVTHKL----CSNHCFNKYRLANGLIMNC----------CEH 382
+CT C K + R + + TH + N C YRL L + C
Sbjct: 682 QCTTCEKAFKYRSNFTKHQKTHSIGRPFACNECGKTYRLNWELNQHKKIHTGEKPYECGE 741
Query: 383 CGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENRKRNA 436
CG+ + S N I +K F C C + + +K + + N+K N+
Sbjct: 742 CGKRFNNNSNLNKHKKIHTGEKHFVCNQCGKAFS--LNSKLSRHQRTHNKKENS 793
Score = 32.3 bits (72), Expect = 1.5
Identities = 50/224 (22%), Positives = 79/224 (35%), Gaps = 24/224 (10%)
Query: 233 QQQLTKPAKITCANCKKPLQKGQTAYQRKGS---AHLFCSTTCLSSFSHK----RTQNTR 285
QQ T C++CKK + Q KG+ + TTC +F ++ + Q T
Sbjct: 644 QQIHTGKKSFICSSCKKTFVRLSDLTQHKGTHTGERPYQCTTCEKAFKYRSNFTKHQKTH 703
Query: 286 SI----ICKKDASTKKANVILPVESSKSFQE--FYSTSCLSPCENNWNLK--KGVFNKSR 337
SI C + T + N L E + C NN NL K + +
Sbjct: 704 SIGRPFACNECGKTYRLNWELNQHKKIHTGEKPYECGECGKRFNNNSNLNKHKKIHTGEK 763
Query: 338 ---CTICSKLAEIRHEVSVNNVTHKLCSNHC-----FNKYRLAN-GLIMNCCEHCGEYMP 388
C C K + ++S + TH N NK++ + G C C +
Sbjct: 764 HFVCNQCGKAFSLNSKLSRHQRTHNKKENSSKSVSNLNKHQKTHAGEKPFPCNECKKAFA 823
Query: 389 SKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENR 432
+ I +K F C SC + ++ + K T + R
Sbjct: 824 QRMDLARHQQIHTGRKPFICSSCKKTFVRLSDLTQHKGTHTGER 867
>gi|169215032 PREDICTED: zinc finger protein 840 [Homo sapiens]
Length = 980
Score = 34.7 bits (78), Expect = 0.29
Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 16/114 (14%)
Query: 337 RCTICSKLAEIRHEVSVNNVTHKL----CSNHCFNKYRLANGLIMNC----------CEH 382
+CT C K + R + + TH + N C YRL L + C
Sbjct: 682 QCTTCEKAFKYRSNFTKHQKTHSIGRPFACNECGKTYRLNWELNQHKKIHTGEKPYECGE 741
Query: 383 CGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENRKRNA 436
CG+ + S N I +K F C C + + +K + + N+K N+
Sbjct: 742 CGKRFNNNSNLNKHKKIHTGEKHFVCNQCGKAFS--LNSKLSRHQRTHNKKENS 793
Score = 32.3 bits (72), Expect = 1.5
Identities = 50/224 (22%), Positives = 79/224 (35%), Gaps = 24/224 (10%)
Query: 233 QQQLTKPAKITCANCKKPLQKGQTAYQRKGS---AHLFCSTTCLSSFSHK----RTQNTR 285
QQ T C++CKK + Q KG+ + TTC +F ++ + Q T
Sbjct: 644 QQIHTGKKSFICSSCKKTFVRLSDLTQHKGTHTGERPYQCTTCEKAFKYRSNFTKHQKTH 703
Query: 286 SI----ICKKDASTKKANVILPVESSKSFQE--FYSTSCLSPCENNWNLK--KGVFNKSR 337
SI C + T + N L E + C NN NL K + +
Sbjct: 704 SIGRPFACNECGKTYRLNWELNQHKKIHTGEKPYECGECGKRFNNNSNLNKHKKIHTGEK 763
Query: 338 ---CTICSKLAEIRHEVSVNNVTHKLCSNHC-----FNKYRLAN-GLIMNCCEHCGEYMP 388
C C K + ++S + TH N NK++ + G C C +
Sbjct: 764 HFVCNQCGKAFSLNSKLSRHQRTHNKKENSSKSVSNLNKHQKTHAGEKPFPCNECKKAFA 823
Query: 389 SKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENR 432
+ I +K F C SC + ++ + K T + R
Sbjct: 824 QRMDLARHQQIHTGRKPFICSSCKKTFVRLSDLTQHKGTHTGER 867
>gi|169214556 PREDICTED: zinc finger protein 840 [Homo sapiens]
Length = 980
Score = 34.7 bits (78), Expect = 0.29
Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 16/114 (14%)
Query: 337 RCTICSKLAEIRHEVSVNNVTHKL----CSNHCFNKYRLANGLIMNC----------CEH 382
+CT C K + R + + TH + N C YRL L + C
Sbjct: 682 QCTTCEKAFKYRSNFTKHQKTHSIGRPFACNECGKTYRLNWELNQHKKIHTGEKPYECGE 741
Query: 383 CGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENRKRNA 436
CG+ + S N I +K F C C + + +K + + N+K N+
Sbjct: 742 CGKRFNNNSNLNKHKKIHTGEKHFVCNQCGKAFS--LNSKLSRHQRTHNKKENS 793
Score = 32.3 bits (72), Expect = 1.5
Identities = 50/224 (22%), Positives = 79/224 (35%), Gaps = 24/224 (10%)
Query: 233 QQQLTKPAKITCANCKKPLQKGQTAYQRKGS---AHLFCSTTCLSSFSHK----RTQNTR 285
QQ T C++CKK + Q KG+ + TTC +F ++ + Q T
Sbjct: 644 QQIHTGKKSFICSSCKKTFVRLSDLTQHKGTHTGERPYQCTTCEKAFKYRSNFTKHQKTH 703
Query: 286 SI----ICKKDASTKKANVILPVESSKSFQE--FYSTSCLSPCENNWNLK--KGVFNKSR 337
SI C + T + N L E + C NN NL K + +
Sbjct: 704 SIGRPFACNECGKTYRLNWELNQHKKIHTGEKPYECGECGKRFNNNSNLNKHKKIHTGEK 763
Query: 338 ---CTICSKLAEIRHEVSVNNVTHKLCSNHC-----FNKYRLAN-GLIMNCCEHCGEYMP 388
C C K + ++S + TH N NK++ + G C C +
Sbjct: 764 HFVCNQCGKAFSLNSKLSRHQRTHNKKENSSKSVSNLNKHQKTHAGEKPFPCNECKKAFA 823
Query: 389 SKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENR 432
+ I +K F C SC + ++ + K T + R
Sbjct: 824 QRMDLARHQQIHTGRKPFICSSCKKTFVRLSDLTQHKGTHTGER 867
>gi|4826686 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Homo sapiens]
Length = 740
Score = 34.3 bits (77), Expect = 0.38
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 543 PQVRNFNFPKDNTGRKFSETYYTRI--LPNGEKTTRSWLLYSTSKDSVFCLYCKLFGEG- 599
P V N P + + Y RI + E+ + L +T K+ V+ C G+G
Sbjct: 585 PYVINVTLPDEK------QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638
Query: 600 -KNQLKNENGCKDWQHLSHILSKHEESEMHVNNSVKYSKLKSDLK 643
+LK + GC W + +LS+ EE H+N ++ S+++ D+K
Sbjct: 639 YNTRLKEDGGCTIWYNEMQLLSEIEE---HLNCTI--SQVEPDIK 678
>gi|117956403 rabaptin, RAB GTPase binding effector protein 2 [Homo
sapiens]
Length = 569
Score = 34.3 bits (77), Expect = 0.38
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 447 GSSNTLLKKIEGIPEKKEKTSQLQLSVECGTDTLLIQENVNLPPSSTSTIADTFQEQLE 505
GSS++L + +G+ ++E+T+ L V GT L+ E + LPP + DT EQL+
Sbjct: 244 GSSSSLPQSRQGLSPEQEETASL---VSTGT---LVPEGIYLPPPGYQLVPDTQWEQLQ 296
>gi|116256449 zinc finger protein 254 [Homo sapiens]
Length = 659
Score = 33.9 bits (76), Expect = 0.50
Identities = 28/97 (28%), Positives = 37/97 (38%), Gaps = 8/97 (8%)
Query: 380 CEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENRKRNAFRE 439
CE CG+ ST +I +KR+ C C +KQ+ + K+ + E
Sbjct: 352 CEECGKAFSQSSTLTTHKIIHTGEKRYKCLECGKAFKQLSTLTTHKIIHVGEKLYKC--E 409
Query: 440 ENEKQLYGSSNTLLKKIEGIPEKKEKTSQLQLSVECG 476
E K SSN KI EK K ECG
Sbjct: 410 ECGKGFNRSSNLTTHKIIHTGEKPYKCE------ECG 440
>gi|209862791 zinc finger protein 90 [Homo sapiens]
Length = 601
Score = 33.1 bits (74), Expect = 0.85
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Query: 380 CEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENRKRNAFRE 439
CE CG+ ST + ++K + CQ C +K+ + K+ S + E
Sbjct: 399 CEECGKAFKRSSTLTIHKISHTEEKPYKCQECDKVFKRSSALSTHKIIHSGEKPYKC--E 456
Query: 440 ENEKQLYGSSNTLLKKIEGIPEKKEKTSQ 468
E K SSN KI EK K +
Sbjct: 457 ECGKAFKRSSNLTTHKISHTEEKLYKCQE 485
>gi|148727251 zinc finger protein 81 [Homo sapiens]
Length = 661
Score = 33.1 bits (74), Expect = 0.85
Identities = 44/216 (20%), Positives = 78/216 (36%), Gaps = 32/216 (14%)
Query: 199 ISQSASFPSNQKQPGVDSLSPVALLRKQNFQPTAQQQLTKPAKIT-CAN--CKKPLQKGQ 255
+SQ+ FP +K + R F P + KP +++ C N +KPL
Sbjct: 261 LSQNVKFPIGEKANTCTEFGKIFTQRSHFFAPQKIHTVEKPHELSKCVNVFTQKPLLSIY 320
Query: 256 TAYQRKGSAHLFCSTTCLSSFSHKRTQNTRSIICKKDASTKKANVILPVESSKSFQEFYS 315
R L+ T C +F QN+ I+ +K + +K P + ++ + F+
Sbjct: 321 LRVHR--DEKLYICTKCGKAF----IQNSELIMHEKTHTREK-----PYKCNECGKSFFQ 369
Query: 316 TSCLSPCENNWNLKKGVFNKSRCTICSKLAEIRHEVSVNNVTHKLCSNHCFNKYRLANGL 375
S L + +K C+ C K + ++++ H G
Sbjct: 370 VSSLLRHQTTHTGEK----LFECSECGKGFSLNSALNIHQKIH--------------TGE 411
Query: 376 IMNCCEHCGEYMPSKSTGNNILVIGGQQKRFCCQSC 411
+ C CG+ KST I ++ + C C
Sbjct: 412 RHHKCSECGKAFTQKSTLRMHQRIHTGERSYICTQC 447
Score = 31.2 bits (69), Expect = 3.2
Identities = 42/196 (21%), Positives = 68/196 (34%), Gaps = 34/196 (17%)
Query: 244 CANCKK--PLQKGQTAYQR--KGSAHLFCSTTCLSSFSHKRT--------QNTRSIICKK 291
C+ C K L +Q+ G H CS C +F+ K T RS IC +
Sbjct: 388 CSECGKGFSLNSALNIHQKIHTGERHHKCSE-CGKAFTQKSTLRMHQRIHTGERSYICTQ 446
Query: 292 --DASTKKANVILPVESSKSFQEFYSTSCLS--PCENNWNLKKGVFNKSR---CTICSKL 344
A +KA++I + + + C P ++ + K + + CT C K
Sbjct: 447 CGQAFIQKAHLIAHQRIHTGEKPYECSDCGKSFPSKSQLQMHKRIHTGEKPYICTECGKA 506
Query: 345 AEIRHEVSVNNVTHKLCSNHCFNKYRLANGLIMNCCEHCGEYMPSKSTGNNILVIGGQQK 404
R ++ + +H G C CG+ +S N I +K
Sbjct: 507 FTNRSNLNTHQKSH--------------TGEKSYICAECGKAFTDRSNFNKHQTIHTGEK 552
Query: 405 RFCCQSCINEYKQMME 420
+ C C + Q E
Sbjct: 553 PYVCADCGRAFIQKSE 568
>gi|40807465 zinc finger protein 341 [Homo sapiens]
Length = 847
Score = 33.1 bits (74), Expect = 0.85
Identities = 24/96 (25%), Positives = 33/96 (34%), Gaps = 21/96 (21%)
Query: 337 RCTICSKLAEIRHEVSVNNVTHKLCSNH-------------CFNKYRLANGLIMNC---- 379
RC +C K +++ V+ +H L H C NKY L +
Sbjct: 497 RCHLCGKDFPSLYDLGVHQYSHSLLPQHSPKKDNAVYKCVKCVNKYSTPEALEHHLQTAT 556
Query: 380 ----CEHCGEYMPSKSTGNNILVIGGQQKRFCCQSC 411
C HC + P + L G RF CQ C
Sbjct: 557 HNFPCPHCQKVFPCERYLRRHLPTHGSGGRFKCQVC 592
>gi|226246537 zinc finger protein 407 isoform 3 [Homo sapiens]
Length = 1660
Score = 32.7 bits (73), Expect = 1.1
Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 18/148 (12%)
Query: 378 NCCEHCGEYMPSKSTGNNILVIGGQQKRF--CCQSCINEYKQMMETKSKKLTASENRKRN 435
N C HC E+ S + V K F C +C +Y + + + A+E K
Sbjct: 1017 NKCLHC-EFSAHSSASLELHVKRKHTKEFEFYCMAC--DYYAVTRREMTRHAATEKHKMK 1073
Query: 436 AFREENEKQLYGSSNTLLKKIEGIPEKKEKTSQLQLSVECG--TDTL---------LIQE 484
N + S + K I +PE++ + + + + G +DTL ++ E
Sbjct: 1074 RQSYLNSANVEAGSADMSKNII-MPEEEHQQNSEEFQIISGQPSDTLKSRNAADCSILNE 1132
Query: 485 NVNLPPSSTSTIADTFQ-EQLEEKNFED 511
N NL S AD+ + E EE NF +
Sbjct: 1133 NTNLDMSKVLCAADSVEVETEEESNFNE 1160
>gi|226246535 zinc finger protein 407 isoform 2 [Homo sapiens]
Length = 1815
Score = 32.7 bits (73), Expect = 1.1
Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 18/148 (12%)
Query: 378 NCCEHCGEYMPSKSTGNNILVIGGQQKRF--CCQSCINEYKQMMETKSKKLTASENRKRN 435
N C HC E+ S + V K F C +C +Y + + + A+E K
Sbjct: 1017 NKCLHC-EFSAHSSASLELHVKRKHTKEFEFYCMAC--DYYAVTRREMTRHAATEKHKMK 1073
Query: 436 AFREENEKQLYGSSNTLLKKIEGIPEKKEKTSQLQLSVECG--TDTL---------LIQE 484
N + S + K I +PE++ + + + + G +DTL ++ E
Sbjct: 1074 RQSYLNSANVEAGSADMSKNII-MPEEEHQQNSEEFQIISGQPSDTLKSRNAADCSILNE 1132
Query: 485 NVNLPPSSTSTIADTFQ-EQLEEKNFED 511
N NL S AD+ + E EE NF +
Sbjct: 1133 NTNLDMSKVLCAADSVEVETEEESNFNE 1160
>gi|134133288 zinc finger protein 407 isoform 1 [Homo sapiens]
Length = 2248
Score = 32.7 bits (73), Expect = 1.1
Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 18/148 (12%)
Query: 378 NCCEHCGEYMPSKSTGNNILVIGGQQKRF--CCQSCINEYKQMMETKSKKLTASENRKRN 435
N C HC E+ S + V K F C +C +Y + + + A+E K
Sbjct: 1017 NKCLHC-EFSAHSSASLELHVKRKHTKEFEFYCMAC--DYYAVTRREMTRHAATEKHKMK 1073
Query: 436 AFREENEKQLYGSSNTLLKKIEGIPEKKEKTSQLQLSVECG--TDTL---------LIQE 484
N + S + K I +PE++ + + + + G +DTL ++ E
Sbjct: 1074 RQSYLNSANVEAGSADMSKNII-MPEEEHQQNSEEFQIISGQPSDTLKSRNAADCSILNE 1132
Query: 485 NVNLPPSSTSTIADTFQ-EQLEEKNFED 511
N NL S AD+ + E EE NF +
Sbjct: 1133 NTNLDMSKVLCAADSVEVETEEESNFNE 1160
>gi|237681196 FEZ family zinc finger 1 isoform 2 [Homo sapiens]
Length = 425
Score = 32.0 bits (71), Expect = 1.9
Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 17/121 (14%)
Query: 327 NLKKGVFNKSRCTICSKLAEIRHEVSVNNVTH--------KLCSNHCFNKYRLANGLIMN 378
N K VF C +C K+ + ++ + H K+C L I++
Sbjct: 204 NAKPKVFT---CEVCGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIH 260
Query: 379 C------CEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENR 432
C CG+ ST N I K F C+ C + Q K+ KLT S +
Sbjct: 261 TQEKPHKCNQCGKAFNRSSTLNTHTRIHAGYKPFVCEFCGKGFHQKGNYKNHKLTHSGEK 320
Query: 433 K 433
+
Sbjct: 321 Q 321
>gi|237681194 FEZ family zinc finger 1 isoform 1 [Homo sapiens]
Length = 475
Score = 32.0 bits (71), Expect = 1.9
Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 17/121 (14%)
Query: 327 NLKKGVFNKSRCTICSKLAEIRHEVSVNNVTH--------KLCSNHCFNKYRLANGLIMN 378
N K VF C +C K+ + ++ + H K+C L I++
Sbjct: 254 NAKPKVFT---CEVCGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIH 310
Query: 379 C------CEHCGEYMPSKSTGNNILVIGGQQKRFCCQSCINEYKQMMETKSKKLTASENR 432
C CG+ ST N I K F C+ C + Q K+ KLT S +
Sbjct: 311 TQEKPHKCNQCGKAFNRSSTLNTHTRIHAGYKPFVCEFCGKGFHQKGNYKNHKLTHSGEK 370
Query: 433 K 433
+
Sbjct: 371 Q 371
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,031,935
Number of Sequences: 37866
Number of extensions: 1273210
Number of successful extensions: 4681
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 4374
Number of HSP's gapped (non-prelim): 320
length of query: 669
length of database: 18,247,518
effective HSP length: 109
effective length of query: 560
effective length of database: 14,120,124
effective search space: 7907269440
effective search space used: 7907269440
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.