Guide to the Human Genome
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Name: ZNF254 Sequence: fasta or formatted (659aa) NCBI GI: 116256449
Description:

zinc finger protein 254

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.9         19           1
 C cysteine            5.5         36           1
 D aspartate           1.4          9           1
 E glutamate           9.6         63           2
 F phenylalanine       4.4         29           2
 G glycine             5.8         38           1
 H histidine           5.9         39           1
 I isoleucine          5.2         34           2
 K lysine             14.4         95           2
 L leucine             6.2         41           2
 M methionine          1.5         10           1
 N asparagine          3.3         22           1
 P proline             3.5         23           2
 Q glutamine           2.9         19           2
 R arginine            4.2         28           2
 S serine              7.0         46           2
 T threonine           8.5         56           2
 V valine              2.0         13           1
 W tryptophan          1.8         12           1
 Y tyrosine            4.1         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 254 
ZNF726                0.772   PREDICTED: zinc finger protein 726 
ZNF726                0.772   PREDICTED: zinc finger protein 726 
ZNF726                0.772   PREDICTED: zinc finger protein 726 
ZNF91                 0.771   zinc finger protein 91 
ZNF208                0.674   zinc finger protein 208 
ZNF429                0.668   zinc finger protein 429 
ZNF493                0.666   zinc finger protein 493 isoform 3 
ZNF43                 0.659   zinc finger protein 43 
ZNF728                0.658   PREDICTED: zinc finger protein 728 
ZNF728                0.656   PREDICTED: zinc finger protein 728 
ZNF728                0.656   PREDICTED: zinc finger protein 728 
ZNF99                 0.649   zinc finger protein 99 
ZNF93                 0.641   zinc finger protein 93 
ZNF85                 0.640   zinc finger protein 85 
ZNF681                0.633   zinc finger protein 681 
ZNF66                 0.632   PREDICTED: zinc finger protein 66 
ZNF66                 0.632   PREDICTED: zinc finger protein 66 
ZNF595                0.621   zinc finger protein 595 
ZNF708                0.621   zinc finger protein 708 
ZNF66                 0.620   PREDICTED: zinc finger protein 66 
ZNF92                 0.620   zinc finger protein 92 isoform 2 
ZNF676                0.610   zinc finger protein 676 
ZNF98                 0.608   zinc finger protein 98 
ZNF737                0.605   PREDICTED: zinc finger protein 737 
ZNF737                0.605   PREDICTED: zinc finger protein 737 
ZNF737                0.605   PREDICTED: zinc finger protein 737 
ZNF675                0.584   zinc finger protein 675 
ZNF730                0.582   PREDICTED: zinc finger protein 730 
ZNF730                0.582   PREDICTED: zinc finger protein 730 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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