Search of human proteins with 217416402

Search of human proteins with 217416402

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|217416402 alanyl-tRNA synthetase domain containing 1 isoform
1 [Homo sapiens]
         (586 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|217416402 alanyl-tRNA synthetase domain containing 1 isoform ...  1193   0.0  
gi|13376886 alanyl-tRNA synthetase domain containing 1 isoform 2...  1057   0.0  
gi|217416405 alanyl-tRNA synthetase domain containing 1 isoform ...   318   7e-87
gi|217416407 alanyl-tRNA synthetase domain containing 1 isoform ...   304   2e-82
gi|23308579 prostaglandin-E synthase 3 [Homo sapiens]                 127   4e-29
gi|38569417 alanyl-tRNA synthetase 2, mitochondrial [Homo sapiens]     62   2e-09
gi|109148542 alanyl-tRNA synthetase [Homo sapiens]                     49   1e-05
gi|239750861 PREDICTED: hypothetical protein XP_002347581 [Homo ...    48   3e-05
gi|117168248 protein tyrosine phosphatase-like A domain containi...    48   3e-05
gi|30425444 ankyrin repeat and kinase domain containing 1 [Homo ...    32   1.2  
gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens]    32   2.1  
gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens]     32   2.1  
gi|7705943 hypothetical protein LOC10826 isoform 1 [Homo sapiens]      31   3.6  

>gi|217416402 alanyl-tRNA synthetase domain containing 1 isoform 1
           [Homo sapiens]
          Length = 586

 Score = 1193 bits (3086), Expect = 0.0
 Identities = 586/586 (100%), Positives = 586/586 (100%)

Query: 1   MFSLPLNCSPDHIRRGSCWGRPQDLKIAAPAWNSKCHPGAGAAMARQHARTLWYDRPRYV 60
           MFSLPLNCSPDHIRRGSCWGRPQDLKIAAPAWNSKCHPGAGAAMARQHARTLWYDRPRYV
Sbjct: 1   MFSLPLNCSPDHIRRGSCWGRPQDLKIAAPAWNSKCHPGAGAAMARQHARTLWYDRPRYV 60

Query: 61  FMEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCF 120
           FMEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCF
Sbjct: 61  FMEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCF 120

Query: 121 VRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPP 180
           VRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPP
Sbjct: 121 VRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPP 180

Query: 181 PAMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTIND 240
           PAMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTIND
Sbjct: 181 PAMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTIND 240

Query: 241 ISVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLK 300
           ISVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLK
Sbjct: 241 ISVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLK 300

Query: 301 TTSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGR 360
           TTSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGR
Sbjct: 301 TTSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGR 360

Query: 361 GLPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRV 420
           GLPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRV
Sbjct: 361 GLPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRV 420

Query: 421 LKWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRN 480
           LKWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRN
Sbjct: 421 LKWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRN 480

Query: 481 SPDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLG 540
           SPDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLG
Sbjct: 481 SPDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLG 540

Query: 541 PRVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE 586
           PRVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE
Sbjct: 541 PRVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE 586


>gi|13376886 alanyl-tRNA synthetase domain containing 1 isoform 2
           [Homo sapiens]
          Length = 525

 Score = 1057 bits (2734), Expect = 0.0
 Identities = 525/525 (100%), Positives = 525/525 (100%)

Query: 62  MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV 121
           MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV
Sbjct: 1   MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV 60

Query: 122 RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP 181
           RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP
Sbjct: 61  RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP 120

Query: 182 AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI 241
           AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI
Sbjct: 121 AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI 180

Query: 242 SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT 301
           SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT
Sbjct: 181 SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT 240

Query: 302 TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG 361
           TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG
Sbjct: 241 TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG 300

Query: 362 LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL 421
           LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL
Sbjct: 301 LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL 360

Query: 422 KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS 481
           KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS
Sbjct: 361 KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS 420

Query: 482 PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP 541
           PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP
Sbjct: 421 PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP 480

Query: 542 RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE 586
           RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE
Sbjct: 481 RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE 525


>gi|217416405 alanyl-tRNA synthetase domain containing 1 isoform 3
           [Homo sapiens]
          Length = 166

 Score =  318 bits (816), Expect = 7e-87
 Identities = 154/187 (82%), Positives = 154/187 (82%), Gaps = 33/187 (17%)

Query: 1   MFSLPLNCSPDHIRRGSCWGRPQDLKIAAPAWNSKCHPGAGAAMARQHARTLWYDRPRYV 60
           MFSLPLNCSPDHIRRGSCWGRPQDLKIAAPAWNSKCHPGAGAAMARQHARTLWYDRPRYV
Sbjct: 1   MFSLPLNCSPDHIRRGSCWGRPQDLKIAAPAWNSKCHPGAGAAMARQHARTLWYDRPRYV 60

Query: 61  FMEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCF 120
           FMEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNS               
Sbjct: 61  FMEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNS--------------- 105

Query: 121 VRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPP 180
                             KPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPP
Sbjct: 106 ------------------KPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPP 147

Query: 181 PAMDDLD 187
           PAMDDLD
Sbjct: 148 PAMDDLD 154


>gi|217416407 alanyl-tRNA synthetase domain containing 1 isoform 4
           [Homo sapiens]
          Length = 161

 Score =  304 bits (778), Expect = 2e-82
 Identities = 149/187 (79%), Positives = 149/187 (79%), Gaps = 38/187 (20%)

Query: 1   MFSLPLNCSPDHIRRGSCWGRPQDLKIAAPAWNSKCHPGAGAAMARQHARTLWYDRPRYV 60
           MFSLPLNCSPDHIRRGSCWGRPQDLKIAAPAWNSKCHPGAGAAMAR              
Sbjct: 1   MFSLPLNCSPDHIRRGSCWGRPQDLKIAAPAWNSKCHPGAGAAMAR-------------- 46

Query: 61  FMEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCF 120
                                   CKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCF
Sbjct: 47  ------------------------CKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCF 82

Query: 121 VRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPP 180
           VRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPP
Sbjct: 83  VRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPP 142

Query: 181 PAMDDLD 187
           PAMDDLD
Sbjct: 143 PAMDDLD 149


>gi|23308579 prostaglandin-E synthase 3 [Homo sapiens]
          Length = 160

 Score =  127 bits (318), Expect = 4e-29
 Identities = 58/129 (44%), Positives = 86/129 (66%), Gaps = 1/129 (0%)

Query: 47  QHARTLWYDRPRYVFMEFCVEDSTDVHVLIEDHRIVFSCKN-ADGVELYNEIEFYAKVNS 105
           Q A   WYDR  YVF+EFCVEDS DV+V  E  ++ FSC   +D  +  NEI+ +  ++ 
Sbjct: 2   QPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDP 61

Query: 106 KDSQDKRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVE 165
            DS+ KR+ RSI C +RK +   +WPRLTKE  K  WLSVDF+NW+DWE D + ++++ +
Sbjct: 62  NDSKHKRTDRSILCCLRKGESGQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFD 121

Query: 166 HYAELLKKV 174
            ++E++  +
Sbjct: 122 RFSEMMNNM 130


>gi|38569417 alanyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
          Length = 985

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 75/296 (25%), Positives = 121/296 (40%), Gaps = 37/296 (12%)

Query: 199 ELQTEGSNGKKEVLSGFQ--VVLEDTVLFPEGGGQPDDRGTI-----NDI--SVLRVTRR 249
           +L TE       V  G +  ++L+ T  + E GGQ  DRG +      D+   V R    
Sbjct: 537 QLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQASDRGYLVRAGQEDVLFPVARAQVC 596

Query: 250 GEQADHFTQTP--LDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKTTSWELG 307
           G    H    P  L  G QV + VD   R   M +H+  HL+           T      
Sbjct: 597 GGFILHEAVAPECLRLGDQVQLHVDEAWRLGCMAKHTATHLLNWALRQTLGPGTEQQGSH 656

Query: 308 RFRSAIELDTPS---MTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSG-RGLP 363
                + LD  +   +T EQ+ A+E +V E +     V + E+ L      QV G R L 
Sbjct: 657 LNPEQLRLDVTTQTPLTPEQLRAVENTVQEAVGQDEAVYMEEVPL--ALTAQVPGLRSLD 714

Query: 364 DDHAGPIRVVNIEGV----------------DSNMCCGTHVSNLSDLQVIKILGTEKGKK 407
           + +  P+RVV++ GV                   +CCGTH+     +  + I+G  +  K
Sbjct: 715 EVYPDPVRVVSV-GVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVIIGDRQLSK 773

Query: 408 NRTNLIFLSGNRVLKWMERSHGTE---KALTALLKCGAEDHVEAVKKLQNSTKILQ 460
             T L+ ++G +  +  E         KA T  L  G+ D  EA++  ++  ++++
Sbjct: 774 GTTRLLAVTGEQAQQARELGQSLAQEVKAATERLSLGSRDVAEALRLSKDIGRLIE 829


>gi|109148542 alanyl-tRNA synthetase [Homo sapiens]
          Length = 968

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 61/267 (22%), Positives = 103/267 (38%), Gaps = 44/267 (16%)

Query: 209 KEVLSGFQ--VVLEDTVLFPEGGGQPDDRGTI----------NDISVLRVTRRGEQADHF 256
           +EV +G +  VVL+ T  + E GGQ  D G +           + +V     RG    H 
Sbjct: 517 EEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHI 576

Query: 257 TQT--PLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKTTSWELGRFRSAIE 314
                 L  G QV + +D  RR   M  H+  H++       F L++   E  +  S + 
Sbjct: 577 GTIYGDLKVGDQVWLFIDEPRRRPIMSNHTATHILN------FALRSVLGEADQKGSLVA 630

Query: 315 LDT--------PSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRGLPDDH 366
            D          +M+ +Q+   E+  NE I     V  ++  L   +  Q       + +
Sbjct: 631 PDRLRFDFTAKGAMSTQQIKKAEEIANEMIEAAKAVYTQDCPLAAAKAIQGLRAVFDETY 690

Query: 367 AGPIRVVNI-----EGVDS-----------NMCCGTHVSNLSDLQVIKILGTEKGKKNRT 410
             P+RVV+I     E +D              C GTH+ N S      I+  E   K   
Sbjct: 691 PDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIR 750

Query: 411 NLIFLSGNRVLKWMERSHGTEKALTAL 437
            ++ ++G    K + ++   +K L+ +
Sbjct: 751 RIVAVTGAEAQKALRKAESLKKCLSVM 777


>gi|239750861 PREDICTED: hypothetical protein XP_002347581 [Homo
           sapiens]
          Length = 190

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 6/137 (4%)

Query: 53  WYDRPRYVFMEFCVEDSTDVHVLIEDHRIVFSCKN--ADGVELYN-EIEFYAKVNSKDSQ 109
           W  R R +++   + D  +  + I ++ + F  +   A G  +Y   +EF   V  +   
Sbjct: 12  WAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLEFLDLVKPEPVY 71

Query: 110 DKRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAE 169
            K + R +   V+K K    W RLTK++ +P++L+ DFD W D E D EMEL   E    
Sbjct: 72  -KLTQRQVNITVQK-KVSQWWERLTKQEKRPLFLAPDFDRWLD-ESDAEMELRAKEEERL 128

Query: 170 LLKKVSTKRPPPAMDDL 186
              ++ ++  P  + +L
Sbjct: 129 NKLRLESEGSPETLTNL 145


>gi|117168248 protein tyrosine phosphatase-like A domain containing
           1 [Homo sapiens]
          Length = 362

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 6/137 (4%)

Query: 53  WYDRPRYVFMEFCVEDSTDVHVLIEDHRIVFSCKN--ADGVELYN-EIEFYAKVNSKDSQ 109
           W  R R +++   + D  +  + I ++ + F  +   A G  +Y   +EF   V  +   
Sbjct: 12  WAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLEFLDLVKPEPVY 71

Query: 110 DKRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAE 169
            K + R +   V+K K    W RLTK++ +P++L+ DFD W D E D EMEL   E    
Sbjct: 72  -KLTQRQVNITVQK-KVSQWWERLTKQEKRPLFLAPDFDRWLD-ESDAEMELRAKEEERL 128

Query: 170 LLKKVSTKRPPPAMDDL 186
              ++ ++  P  + +L
Sbjct: 129 NKLRLESEGSPETLTNL 145


>gi|30425444 ankyrin repeat and kinase domain containing 1 [Homo
           sapiens]
          Length = 765

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 9/121 (7%)

Query: 428 HGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNN-LNLLRDLAVHIAHSLRNSPDWGG 486
           HG E  ++ALL+CGA+ +             +Q++  L+++  L  H     RN   W  
Sbjct: 636 HGEEAVVSALLQCGADPNAAEQSGWTPLHLAVQRSTFLSVINLLEHHANVHARNKVGWTP 695

Query: 487 VVILHRKEGDSEFMNIIAN-------EIGSEETLLFLTVGDEKGGGLFLLAGPPASVETL 539
             +   K G++  + ++         + G   T L L +   K G +  L G   SV TL
Sbjct: 696 AHLAALK-GNTAILKVLVEAGAQLDVQDGVSCTPLQLALRSRKQGIMSFLEGKEPSVATL 754

Query: 540 G 540
           G
Sbjct: 755 G 755


>gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens]
          Length = 600

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 21/107 (19%), Positives = 48/107 (44%)

Query: 165 EHYAELLKKVSTKRPPPAMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVL 224
           +H + +L K+  +RP  A+D  +  +  V       + +    + E+L  +++  +   L
Sbjct: 231 DHLSNMLTKILNERPENAVDIFENISQDVKMAHFSKKFDALQNENELLPTYEIAEKQKAL 290

Query: 225 FPEGGGQPDDRGTINDISVLRVTRRGEQADHFTQTPLDPGSQVLVRV 271
           F +G  +  D+   ++I+   +    E A +F Q  +  G+    R+
Sbjct: 291 FLQGHLEGVDQELEDEIAENALPNVMESAFYFEQAGVGLGTDETYRI 337


>gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens]
          Length = 716

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 21/107 (19%), Positives = 48/107 (44%)

Query: 165 EHYAELLKKVSTKRPPPAMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVL 224
           +H + +L K+  +RP  A+D  +  +  V       + +    + E+L  +++  +   L
Sbjct: 231 DHLSNMLTKILNERPENAVDIFENISQDVKMAHFSKKFDALQNENELLPTYEIAEKQKAL 290

Query: 225 FPEGGGQPDDRGTINDISVLRVTRRGEQADHFTQTPLDPGSQVLVRV 271
           F +G  +  D+   ++I+   +    E A +F Q  +  G+    R+
Sbjct: 291 FLQGHLEGVDQELEDEIAENALPNVMESAFYFEQAGVGLGTDETYRI 337


>gi|7705943 hypothetical protein LOC10826 isoform 1 [Homo sapiens]
          Length = 144

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 6/38 (15%)

Query: 17 SCWGRPQDLKIAAP---AWNS---KCHPGAGAAMARQH 48
          SCW  P+ L+ +      W+    KCHPG  +AM  +H
Sbjct: 54 SCWASPRSLRASQTPQRGWSERQPKCHPGCPSAMGCRH 91


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,045,937
Number of Sequences: 37866
Number of extensions: 1056027
Number of successful extensions: 2440
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2422
Number of HSP's gapped (non-prelim): 15
length of query: 586
length of database: 18,247,518
effective HSP length: 108
effective length of query: 478
effective length of database: 14,157,990
effective search space: 6767519220
effective search space used: 6767519220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.