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Search of human proteins with 217416386
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|217416386 aarF domain containing kinase 4 isoform b [Homo
sapiens]
(503 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|217416386 aarF domain containing kinase 4 isoform b [Homo sap... 1028 0.0
gi|27363457 aarF domain containing kinase 4 isoform a [Homo sapi... 1008 0.0
gi|34147522 chaperone, ABC1 activity of bc1 complex like precurs... 511 e-145
gi|40254938 aarF domain containing kinase 1 isoform a [Homo sapi... 79 1e-14
gi|41393593 aarF domain containing kinase 5 [Homo sapiens] 77 3e-14
gi|217035081 aarF domain containing kinase 1 isoform b [Homo sap... 71 2e-12
gi|32261307 aarF domain containing kinase 2 [Homo sapiens] 44 4e-04
gi|35493713 vacuolar protein sorting 13B isoform 5 [Homo sapiens] 34 0.27
gi|35493701 vacuolar protein sorting 13B isoform 1 [Homo sapiens] 34 0.27
gi|35493725 vacuolar protein sorting 13B isoform 3 [Homo sapiens] 34 0.27
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2... 32 1.0
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 32 1.0
gi|169203160 PREDICTED: hypothetical protein [Homo sapiens] 32 1.3
gi|169203656 PREDICTED: hypothetical protein [Homo sapiens] 32 1.3
gi|169202387 PREDICTED: hypothetical protein [Homo sapiens] 32 1.3
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 32 1.8
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 32 1.8
gi|89111943 Kruppel-like factor 8 isoform 1 [Homo sapiens] 31 2.3
gi|31652238 cut-like homeobox 1 isoform c [Homo sapiens] 31 2.3
gi|31652236 cut-like homeobox 1 isoform b [Homo sapiens] 31 2.3
gi|32528297 ribosomal protein S6 kinase, polypeptide 5 isoform b... 31 2.3
gi|32528295 ribosomal protein S6 kinase, polypeptide 5 isoform a... 31 2.3
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 31 2.3
gi|226530795 Kruppel-like factor 8 isoform 2 [Homo sapiens] 31 3.0
gi|55743138 ribosomal protein S6 kinase, 90kDa, polypeptide 4 is... 31 3.0
gi|4506735 ribosomal protein S6 kinase, 90kDa, polypeptide 4 iso... 31 3.0
gi|121582655 ankyrin repeat domain 35 [Homo sapiens] 31 3.0
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 30 3.9
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 30 3.9
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 30 3.9
>gi|217416386 aarF domain containing kinase 4 isoform b [Homo
sapiens]
Length = 503
Score = 1028 bits (2658), Expect = 0.0
Identities = 503/503 (100%), Positives = 503/503 (100%)
Query: 1 MWLKVGGLLRGTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKFYQDGPGRGLGEEDIR 60
MWLKVGGLLRGTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKFYQDGPGRGLGEEDIR
Sbjct: 1 MWLKVGGLLRGTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKFYQDGPGRGLGEEDIR 60
Query: 61 RAREARPRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSMPGGRL 120
RAREARPRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSMPGGRL
Sbjct: 61 RAREARPRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSMPGGRL 120
Query: 121 QSDNSFISPQLQHIFERVRQSADFMPRWQMLRVLEEELGRDWQAKVASLEEVPFAAASIG 180
QSDNSFISPQLQHIFERVRQSADFMPRWQMLRVLEEELGRDWQAKVASLEEVPFAAASIG
Sbjct: 121 QSDNSFISPQLQHIFERVRQSADFMPRWQMLRVLEEELGRDWQAKVASLEEVPFAAASIG 180
Query: 181 QVHQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLAVLKMSAALPAGLFAEQSLQALQQEL 240
QVHQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLAVLKMSAALPAGLFAEQSLQALQQEL
Sbjct: 181 QVHQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLAVLKMSAALPAGLFAEQSLQALQQEL 240
Query: 241 AWECDYRREAACAQNFRQLLANDPFFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQD 300
AWECDYRREAACAQNFRQLLANDPFFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQD
Sbjct: 241 AWECDYRREAACAQNFRQLLANDPFFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQD 300
Query: 301 LRNQICFQLLTLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHY 360
LRNQICFQLLTLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHY
Sbjct: 301 LRNQICFQLLTLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHY 360
Query: 361 IEVVKAAADGDRDCVLQKSRDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGE 420
IEVVKAAADGDRDCVLQKSRDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGE
Sbjct: 361 IEVVKAAADGDRDCVLQKSRDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGE 420
Query: 421 TARRIQDLIPVLLRHRLCPPPEETYALHRKLAGAFLACAHLRAHIACRDLFQDTYHRYWA 480
TARRIQDLIPVLLRHRLCPPPEETYALHRKLAGAFLACAHLRAHIACRDLFQDTYHRYWA
Sbjct: 421 TARRIQDLIPVLLRHRLCPPPEETYALHRKLAGAFLACAHLRAHIACRDLFQDTYHRYWA 480
Query: 481 SRQPDAATAGSLPTKGDSWVDPS 503
SRQPDAATAGSLPTKGDSWVDPS
Sbjct: 481 SRQPDAATAGSLPTKGDSWVDPS 503
>gi|27363457 aarF domain containing kinase 4 isoform a [Homo
sapiens]
Length = 544
Score = 1008 bits (2606), Expect = 0.0
Identities = 503/544 (92%), Positives = 503/544 (92%), Gaps = 41/544 (7%)
Query: 1 MWLKVGGLLRGTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKFYQDGPGRGLGEEDIR 60
MWLKVGGLLRGTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKFYQDGPGRGLGEEDIR
Sbjct: 1 MWLKVGGLLRGTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKFYQDGPGRGLGEEDIR 60
Query: 61 RAREARPRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSMPGGRL 120
RAREARPRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSMPGGRL
Sbjct: 61 RAREARPRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSMPGGRL 120
Query: 121 QS-----------------------------------------DNSFISPQLQHIFERVR 139
QS DNSFISPQLQHIFERVR
Sbjct: 121 QSEGGSGLDSSPFLSEANAERIVQTLCTVRGAALKVGQMLSIQDNSFISPQLQHIFERVR 180
Query: 140 QSADFMPRWQMLRVLEEELGRDWQAKVASLEEVPFAAASIGQVHQGLLRDGTEVAVKIQY 199
QSADFMPRWQMLRVLEEELGRDWQAKVASLEEVPFAAASIGQVHQGLLRDGTEVAVKIQY
Sbjct: 181 QSADFMPRWQMLRVLEEELGRDWQAKVASLEEVPFAAASIGQVHQGLLRDGTEVAVKIQY 240
Query: 200 PGIAQSIQSDVQNLLAVLKMSAALPAGLFAEQSLQALQQELAWECDYRREAACAQNFRQL 259
PGIAQSIQSDVQNLLAVLKMSAALPAGLFAEQSLQALQQELAWECDYRREAACAQNFRQL
Sbjct: 241 PGIAQSIQSDVQNLLAVLKMSAALPAGLFAEQSLQALQQELAWECDYRREAACAQNFRQL 300
Query: 260 LANDPFFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDLRNQICFQLLTLCLRELFE 319
LANDPFFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDLRNQICFQLLTLCLRELFE
Sbjct: 301 LANDPFFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDLRNQICFQLLTLCLRELFE 360
Query: 320 FRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADGDRDCVLQKS 379
FRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADGDRDCVLQKS
Sbjct: 361 FRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADGDRDCVLQKS 420
Query: 380 RDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETARRIQDLIPVLLRHRLCP 439
RDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETARRIQDLIPVLLRHRLCP
Sbjct: 421 RDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETARRIQDLIPVLLRHRLCP 480
Query: 440 PPEETYALHRKLAGAFLACAHLRAHIACRDLFQDTYHRYWASRQPDAATAGSLPTKGDSW 499
PPEETYALHRKLAGAFLACAHLRAHIACRDLFQDTYHRYWASRQPDAATAGSLPTKGDSW
Sbjct: 481 PPEETYALHRKLAGAFLACAHLRAHIACRDLFQDTYHRYWASRQPDAATAGSLPTKGDSW 540
Query: 500 VDPS 503
VDPS
Sbjct: 541 VDPS 544
>gi|34147522 chaperone, ABC1 activity of bc1 complex like precursor
[Homo sapiens]
Length = 647
Score = 511 bits (1315), Expect = e-145
Identities = 266/512 (51%), Positives = 337/512 (65%), Gaps = 44/512 (8%)
Query: 11 GTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKFYQD-GPGRGLGEEDIRRAREARPR- 68
G GQ +G G L P G + F+QD P GL EDI +AR+A+ R
Sbjct: 129 GFPGQASSPLGRANGRLFANPRDSFSAMGFQRRFFHQDQSPVGGLTAEDIEKARQAKARP 188
Query: 69 --KTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSM----PGGRLQ- 121
K + LS+ +RERKVP +RI RLANFGGLAVGLG G LAE+AKKS+ P G+
Sbjct: 189 ENKQHKQTLSEHARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKSLRSEDPSGKKAV 248
Query: 122 -----------------------------------SDNSFISPQLQHIFERVRQSADFMP 146
D++FI+P L IFERVRQSADFMP
Sbjct: 249 LGSSPFLSEANAERIVRTLCKVRGAALKLGQMLSIQDDAFINPHLAKIFERVRQSADFMP 308
Query: 147 RWQMLRVLEEELGRDWQAKVASLEEVPFAAASIGQVHQGLLRDGTEVAVKIQYPGIAQSI 206
QM++ L +LG +W+ K+ EE PFAAASIGQVH ++ G EVA+KIQYPG+AQSI
Sbjct: 309 LKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSI 368
Query: 207 QSDVQNLLAVLKMSAALPAGLFAEQSLQALQQELAWECDYRREAACAQNFRQLLANDPFF 266
SDV NL+AVL MS LP GLF E + L++ELA ECDY+REAACA+ FR LL PFF
Sbjct: 369 NSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACARKFRDLLKGHPFF 428
Query: 267 RVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDLRNQICFQLLTLCLRELFEFRFMQTD 326
VP +V ELC+ VL EL G PLDQ +GLSQ++RN+IC+ +L LCLRELFEF FMQTD
Sbjct: 429 YVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCLRELFEFHFMQTD 488
Query: 327 PNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADGDRDCVLQKSRDLKFLT 386
PNW+NF YD H+V LLDFGA+RE+ FTD YI++++AAAD DR+ V KS ++KFLT
Sbjct: 489 PNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRAKSIEMKFLT 548
Query: 387 GFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETARRIQDLIPVLLRHRLCPPPEETYA 446
G+E K DAH++A++ILGE FA+ P+DFG+ T +I +LIPV+LRHRL PPPEETY+
Sbjct: 549 GYEVKVMEDAHLDAILILGEAFASDEPFDFGTQSTTEKIHNLIPVMLRHRLVPPPEETYS 608
Query: 447 LHRKLAGAFLACAHLRAHIACRDLFQDTYHRY 478
LHRK+ G+FL C+ L+A C+ +F++ Y Y
Sbjct: 609 LHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 640
>gi|40254938 aarF domain containing kinase 1 isoform a [Homo
sapiens]
Length = 523
Score = 79.0 bits (193), Expect = 1e-14
Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 14/244 (5%)
Query: 149 QMLRVLEEELGRDWQAKVASLEEVPFAAASIGQVHQGLLRDGTEVAVKIQYPGIAQSIQS 208
++ +V+ E+LG++ S ++ P AS+ QVH+ +L DG VAVK+Q+P +
Sbjct: 129 EIRQVIREDLGKEIHDLFQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSK 188
Query: 209 DVQNLLAVLKMSAALPAGLFAEQSLQALQQE----LAWECDYRREAACAQNFRQLLANDP 264
D+ L+ VL ++ LF E L E L E D+ E A+ Q+L +
Sbjct: 189 DIL-LMEVLVLAV---KQLFPEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVSQMLRHFD 244
Query: 265 FFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDL--RNQICFQLLTLCLRELFEFRF 322
F +VP + +L T RVL ME G ++ + ++ N+I L + +F F
Sbjct: 245 FLKVPRIHWDLSTERVLLMEFVDGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGF 304
Query: 323 MQTDPNWANFLY----DASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADGDRDCVLQK 378
+ DP+ N L ++ LLD G + EF +Y + ++ D V +
Sbjct: 305 VHCDPHPGNVLVRKHPGTGKAEIVLLDHGLYQMLTEEFRLNYCHLWQSLIWTDMKRVKEY 364
Query: 379 SRDL 382
S+ L
Sbjct: 365 SQRL 368
>gi|41393593 aarF domain containing kinase 5 [Homo sapiens]
Length = 580
Score = 77.4 bits (189), Expect = 3e-14
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 5/180 (2%)
Query: 173 PFAAASIGQVHQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLAVLKMSAALPAGLFAEQS 232
P AAAS+ QVH+ L DGT VAVK+QY + D+ L +L++ +
Sbjct: 205 PIAAASLAQVHRAKLHDGTSVAVKVQYIDLRDRFDGDIHTLELLLRLVEVMHPSFGFSWV 264
Query: 233 LQALQQELAWECDYRREAACAQNFRQLLANDPFFRVPAVVKELCTTRVLGMELAGGVPLD 292
LQ L+ LA E D+ E A+ + LA+ P+ VP V + + RVL + G ++
Sbjct: 265 LQDLKGTLAQELDFENEGRNAERCARELAHFPYVVVPRVHWDKSSKRVLTADFCAGCKVN 324
Query: 293 QCQGL-SQDLR-NQICFQLLTLCLRELFEFRFMQTDPNWANFLY---DASSHQVTLLDFG 347
+ + SQ L + I +L+ ++F F+ +DP+ N L ++ LLD G
Sbjct: 325 DVEAIRSQGLAVHDIAEKLIKAFAEQIFYTGFIHSDPHPGNVLVRKGPDGKAELVLLDHG 384
>gi|217035081 aarF domain containing kinase 1 isoform b [Homo
sapiens]
Length = 455
Score = 71.2 bits (173), Expect = 2e-12
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 14/225 (6%)
Query: 168 SLEEVPFAAASIGQVHQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLAVLKMSAALPAGL 227
S ++ P AS+ QVH+ +L DG VAVK+Q+P + D+ L+ VL ++ L
Sbjct: 80 SFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSKDIL-LMEVLVLAV---KQL 135
Query: 228 FAEQSLQALQQE----LAWECDYRREAACAQNFRQLLANDPFFRVPAVVKELCTTRVLGM 283
F E L E L E D+ E A+ Q+L + F +VP + +L T RVL M
Sbjct: 136 FPEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVSQMLRHFDFLKVPRIHWDLSTERVLLM 195
Query: 284 ELAGGVPLDQCQGLSQDL--RNQICFQLLTLCLRELFEFRFMQTDPNWANFLY----DAS 337
E G ++ + ++ N+I L + +F F+ DP+ N L
Sbjct: 196 EFVDGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGNVLVRKHPGTG 255
Query: 338 SHQVTLLDFGASREFGTEFTDHYIEVVKAAADGDRDCVLQKSRDL 382
++ LLD G + EF +Y + ++ D V + S+ L
Sbjct: 256 KAEIVLLDHGLYQMLTEEFRLNYCHLWQSLIWTDMKRVKEYSQRL 300
>gi|32261307 aarF domain containing kinase 2 [Homo sapiens]
Length = 626
Score = 43.5 bits (101), Expect = 4e-04
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 175 AAASIGQV--HQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLAVLKMSAALPA--GLFAE 230
A S QV HQ + VAVK+ +PG+ + D+ + ++ LP L
Sbjct: 288 AGVSRAQVPGHQPEATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLP 347
Query: 231 QSLQALQQELAWECDYRREAACAQNFRQLLANDPFFRVPAVVKELCTTRVLGMELAGGVP 290
+ ++ ++ + + D R EA ++F+ N + P ++ T VL VP
Sbjct: 348 EIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVP 407
Query: 291 LDQCQ--GLSQDLRNQICFQLLTLCLRELFEFRFMQTDPNWANFLYDASS 338
+ Q G+ DL+ +I + + L+ +F F+ D + N L ++
Sbjct: 408 VSSYQQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGAN 457
>gi|35493713 vacuolar protein sorting 13B isoform 5 [Homo sapiens]
Length = 4022
Score = 34.3 bits (77), Expect = 0.27
Identities = 31/133 (23%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 311 TLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADG 370
T LF++R + + A F+ D++ H+ T + + FG + D+ + + G
Sbjct: 492 TYLTNSLFDYRSPENNGTRAEFILDSTHHKETYTEIAGMQRFGAFYMDYLYTMENTSGKG 551
Query: 371 ---DRDCVLQKSRDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETA-RRIQ 426
+D KS DL + TK+ GP DF +A RI
Sbjct: 552 STNQQDFSSGKSEDLGTVQEKSTKSL----------------VIGPLDFRLDSSAVHRIL 595
Query: 427 DLIPVLLRHRLCP 439
+I L H P
Sbjct: 596 KMIVCALEHEYEP 608
>gi|35493701 vacuolar protein sorting 13B isoform 1 [Homo sapiens]
Length = 3997
Score = 34.3 bits (77), Expect = 0.27
Identities = 31/133 (23%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 311 TLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADG 370
T LF++R + + A F+ D++ H+ T + + FG + D+ + + G
Sbjct: 492 TYLTNSLFDYRSPENNGTRAEFILDSTHHKETYTEIAGMQRFGAFYMDYLYTMENTSGKG 551
Query: 371 ---DRDCVLQKSRDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETA-RRIQ 426
+D KS DL + TK+ GP DF +A RI
Sbjct: 552 STNQQDFSSGKSEDLGTVQEKSTKSL----------------VIGPLDFRLDSSAVHRIL 595
Query: 427 DLIPVLLRHRLCP 439
+I L H P
Sbjct: 596 KMIVCALEHEYEP 608
>gi|35493725 vacuolar protein sorting 13B isoform 3 [Homo sapiens]
Length = 863
Score = 34.3 bits (77), Expect = 0.27
Identities = 31/133 (23%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 311 TLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADG 370
T LF++R + + A F+ D++ H+ T + + FG + D+ + + G
Sbjct: 492 TYLTNSLFDYRSPENNGTRAEFILDSTHHKETYTEIAGMQRFGAFYMDYLYTMENTSGKG 551
Query: 371 ---DRDCVLQKSRDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETA-RRIQ 426
+D KS DL + TK+ GP DF +A RI
Sbjct: 552 STNQQDFSSGKSEDLGTVQEKSTKSL----------------VIGPLDFRLDSSAVHRIL 595
Query: 427 DLIPVLLRHRLCP 439
+I L H P
Sbjct: 596 KMIVCALEHEYEP 608
>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
[Homo sapiens]
Length = 1481
Score = 32.3 bits (72), Expect = 1.0
Identities = 45/183 (24%), Positives = 69/183 (37%), Gaps = 27/183 (14%)
Query: 53 GLGEEDIRRAREARPRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAK 112
G E ++ + A P+ P P + + + I++ N LAV L L L
Sbjct: 1073 GTSTEPVKNSSPAPPQ--PAPGKVESGAGDAIGLADITQQLNQSELAVLLNL--LQSQTD 1128
Query: 113 KSMPGGRLQSDNSFISPQLQHIFERVRQSADFMPRWQMLRVLEEELGRDWQAKVASLEEV 172
S+P Q N +P++Q E + QS + ++ + A SL+E
Sbjct: 1129 LSIPQ-MAQLLNIHSNPEMQQQLEALNQSIS-----ALTEATSQQQDSETMAPEESLKEA 1182
Query: 173 PFAAASIGQVHQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLAVL---KMSAALPAGLFA 229
P A + Q L A S +D+QN+LAVL M PAG
Sbjct: 1183 PSAPVILPSAEQTTLE--------------ASSTPADMQNILAVLLSQLMKTQEPAGSLE 1228
Query: 230 EQS 232
E +
Sbjct: 1229 ENN 1231
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 32.3 bits (72), Expect = 1.0
Identities = 45/183 (24%), Positives = 69/183 (37%), Gaps = 27/183 (14%)
Query: 53 GLGEEDIRRAREARPRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAK 112
G E ++ + A P+ P P + + + I++ N LAV L L L
Sbjct: 1073 GTSTEPVKNSSPAPPQ--PAPGKVESGAGDAIGLADITQQLNQSELAVLLNL--LQSQTD 1128
Query: 113 KSMPGGRLQSDNSFISPQLQHIFERVRQSADFMPRWQMLRVLEEELGRDWQAKVASLEEV 172
S+P Q N +P++Q E + QS + ++ + A SL+E
Sbjct: 1129 LSIPQ-MAQLLNIHSNPEMQQQLEALNQSIS-----ALTEATSQQQDSETMAPEESLKEA 1182
Query: 173 PFAAASIGQVHQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLAVL---KMSAALPAGLFA 229
P A + Q L A S +D+QN+LAVL M PAG
Sbjct: 1183 PSAPVILPSAEQTTLE--------------ASSTPADMQNILAVLLSQLMKTQEPAGSLE 1228
Query: 230 EQS 232
E +
Sbjct: 1229 ENN 1231
>gi|169203160 PREDICTED: hypothetical protein [Homo sapiens]
Length = 638
Score = 32.0 bits (71), Expect = 1.3
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 11/60 (18%)
Query: 11 GTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKFYQDGPGRGLGEEDIRRAREARPRKT 70
G+ Q +T W L P RWGPC G G GRG G RR RE +T
Sbjct: 404 GSAIQALETSAW---VLPPSTGRWGPCRGC--------GRGRGRGRGRGRRPRELGTEET 452
>gi|169203656 PREDICTED: hypothetical protein [Homo sapiens]
Length = 638
Score = 32.0 bits (71), Expect = 1.3
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 11/60 (18%)
Query: 11 GTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKFYQDGPGRGLGEEDIRRAREARPRKT 70
G+ Q +T W L P RWGPC G G GRG G RR RE +T
Sbjct: 404 GSAIQALETSAW---VLPPSTGRWGPCRGC--------GRGRGRGRGRGRRPRELGTEET 452
>gi|169202387 PREDICTED: hypothetical protein [Homo sapiens]
Length = 638
Score = 32.0 bits (71), Expect = 1.3
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 11/60 (18%)
Query: 11 GTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKFYQDGPGRGLGEEDIRRAREARPRKT 70
G+ Q +T W L P RWGPC G G GRG G RR RE +T
Sbjct: 404 GSAIQALETSAW---VLPPSTGRWGPCRGC--------GRGRGRGRGRGRRPRELGTEET 452
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 31.6 bits (70), Expect = 1.8
Identities = 33/101 (32%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Query: 7 GLLRGTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKF-------YQDGPGR---GLGE 56
GL RGT Q T W AL P GG+W +F +QDG R G G
Sbjct: 317 GLARGTAPQPAST--W---ALAARPR----AGGTWTSRFEAQRGCAHQDGQRRTRDGAGN 367
Query: 57 EDIRRAR-------EARPRKTPRPQLSDRSRERKVPASRIS 90
AR RPR+ PR L + + R+ P +R S
Sbjct: 368 HASEPARVWSPPPRRQRPRRLPRASLQEEPK-RRPPCARPS 407
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 31.6 bits (70), Expect = 1.8
Identities = 33/101 (32%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Query: 7 GLLRGTGGQLGQTVGWPCGALGPGPHRWGPCGGSWAQKF-------YQDGPGR---GLGE 56
GL RGT Q T W AL P GG+W +F +QDG R G G
Sbjct: 317 GLARGTAPQPAST--W---ALAARPR----AGGTWTSRFEAQRGCAHQDGQRRTRDGAGN 367
Query: 57 EDIRRAR-------EARPRKTPRPQLSDRSRERKVPASRIS 90
AR RPR+ PR L + + R+ P +R S
Sbjct: 368 HASEPARVWSPPPRRQRPRRLPRASLQEEPK-RRPPCARPS 407
>gi|89111943 Kruppel-like factor 8 isoform 1 [Homo sapiens]
Length = 359
Score = 31.2 bits (69), Expect = 2.3
Identities = 43/183 (23%), Positives = 69/183 (37%), Gaps = 42/183 (22%)
Query: 67 PRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSMPGGRLQSDNSF 126
P + P+PQ S ++ S +S AN + PG L S S
Sbjct: 107 PIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLT---------------PGSVLTSSQST 151
Query: 127 ISPQLQHIFERVRQSADFMPRWQMLRVLEEELGRDWQAKVASLEEVPFAAASIGQVHQGL 186
S Q+ H+ + + +P K+ L+ +P S+ V+ L
Sbjct: 152 GSQQILHVIHTIPSVS--LPN-----------------KMGGLKTIPVVVQSLPMVYTTL 192
Query: 187 LRDGTEVAVKIQYPG----IAQSIQSDVQNLLAVLKMS----AALPAGLFAEQSLQALQQ 238
DG A+ + G A S++ D ++ + S + + +G A QSLQ LQQ
Sbjct: 193 PADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEESTIESGSSALQSLQGLQQ 252
Query: 239 ELA 241
E A
Sbjct: 253 EPA 255
>gi|31652238 cut-like homeobox 1 isoform c [Homo sapiens]
Length = 676
Score = 31.2 bits (69), Expect = 2.3
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 44 KFYQDGPGRGLGEED--IRRAREARPRKTPRPQLSDRSRERK 83
KF Q PGRG G +D +R + + R P S R R+RK
Sbjct: 550 KFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRK 591
>gi|31652236 cut-like homeobox 1 isoform b [Homo sapiens]
Length = 678
Score = 31.2 bits (69), Expect = 2.3
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 44 KFYQDGPGRGLGEED--IRRAREARPRKTPRPQLSDRSRERK 83
KF Q PGRG G +D +R + + R P S R R+RK
Sbjct: 552 KFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRK 593
>gi|32528297 ribosomal protein S6 kinase, polypeptide 5 isoform b
[Homo sapiens]
Length = 549
Score = 31.2 bits (69), Expect = 2.3
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 304 QICFQLLTLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTD 358
QI + L L L + + D N L D++ H V L DFG S+EF + T+
Sbjct: 155 QIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH-VVLTDFGLSKEFVADETE 208
>gi|32528295 ribosomal protein S6 kinase, polypeptide 5 isoform a
[Homo sapiens]
Length = 802
Score = 31.2 bits (69), Expect = 2.3
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 304 QICFQLLTLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTD 358
QI + L L L + + D N L D++ H V L DFG S+EF + T+
Sbjct: 155 QIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH-VVLTDFGLSKEFVADETE 208
>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 31.2 bits (69), Expect = 2.3
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 13 GGQLGQTVGWPCGALGPGPH-------RWGPCGGSWAQKFY----QDGPGRGLGEEDIRR 61
G +L T WP G L GP R GG A++ + G R L E R
Sbjct: 85 GARLQATRTWPAGILEGGPQVAARGGGRGWEGGGLGARRAVTAARRGGASRPLAGEPWRE 144
Query: 62 AREARPRKTPRPQLSDRSRERKVPASRIS 90
A RP++ P+ + SR + + R+S
Sbjct: 145 AARRRPQQCPQWGRARESRSAALASPRVS 173
>gi|226530795 Kruppel-like factor 8 isoform 2 [Homo sapiens]
Length = 257
Score = 30.8 bits (68), Expect = 3.0
Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 42/181 (23%)
Query: 67 PRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSMPGGRLQSDNSF 126
P + P+PQ S ++ S +S AN + PG L S S
Sbjct: 107 PIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLT---------------PGSVLTSSQST 151
Query: 127 ISPQLQHIFERVRQSADFMPRWQMLRVLEEELGRDWQAKVASLEEVPFAAASIGQVHQGL 186
S Q+ H+ + + +P K+ L+ +P S+ V+ L
Sbjct: 152 GSQQILHVIHTIPSVS--LPN-----------------KMGGLKTIPVVVQSLPMVYTTL 192
Query: 187 LRDGTEVAVKIQYPG----IAQSIQSDVQNLLAVLKMS----AALPAGLFAEQSLQALQQ 238
DG A+ + G A S++ D ++ + S + + +G A QSLQ LQQ
Sbjct: 193 PADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEESTIESGSSALQSLQGLQQ 252
Query: 239 E 239
E
Sbjct: 253 E 253
>gi|55743138 ribosomal protein S6 kinase, 90kDa, polypeptide 4
isoform b [Homo sapiens]
Length = 766
Score = 30.8 bits (68), Expect = 3.0
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 310 LTLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTE 355
+ L L L + + D N L D+ H + L DFG S+EF TE
Sbjct: 145 IVLALEHLHKLGIIYRDLKLENVLLDSEGH-IVLTDFGLSKEFLTE 189
>gi|4506735 ribosomal protein S6 kinase, 90kDa, polypeptide 4
isoform a [Homo sapiens]
Length = 772
Score = 30.8 bits (68), Expect = 3.0
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 310 LTLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTE 355
+ L L L + + D N L D+ H + L DFG S+EF TE
Sbjct: 145 IVLALEHLHKLGIIYRDLKLENVLLDSEGH-IVLTDFGLSKEFLTE 189
>gi|121582655 ankyrin repeat domain 35 [Homo sapiens]
Length = 1001
Score = 30.8 bits (68), Expect = 3.0
Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 26/200 (13%)
Query: 41 WAQKFYQDGPGRGLGEEDIRRAREARPRKTPRPQLSDRSRERKVPASRISRLANFGGLAV 100
WA+ Q P E + +RE + P D +E++VP +R L GG
Sbjct: 550 WAKAGLQVKP-----EVPSQESREGALKAAPGSIKQDEEKEKRVPGARGEPLGALGG--- 601
Query: 101 GLGLGVLAEMAKKSMPGGRLQSDNSFISPQLQHIFERVRQSADFMPRWQM-LRVLEEELG 159
E A + G+L+ + S + ++ E + + R Q L+ L + L
Sbjct: 602 --------EKALGGLAKGQLEKEMSVLRLSNSNLLEELGELGRERQRLQRELQSLSQRLQ 653
Query: 160 RDWQAKVASLEEVPFAAASIGQVHQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLAVLKM 219
R++ K + ++ S+G + L + E K++ +QS S ++ L
Sbjct: 654 REFVPKPEAQVQLQQLRQSVGLLTNELAME-KEATEKLRKLLASQS--SGLRGLW----- 705
Query: 220 SAALPAGLFAEQSLQALQQE 239
LPA L E+S Q+ E
Sbjct: 706 -DCLPADLVGERSAQSKAAE 724
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 30.4 bits (67), Expect = 3.9
Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 29/221 (13%)
Query: 56 EEDIRRAREARPRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSM 115
EE RR R+A + + Q++ + +R A S+ A+F L + E +
Sbjct: 1546 EEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQ 1605
Query: 116 PGGRLQSDNSFISPQLQHIFERVRQSAD-FMPRWQM-------LRVLEEELGRDWQAKVA 167
+ + Q Q ER R+ A+ + RWQ+ LR+ EE+ + A
Sbjct: 1606 -----LREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQA 1660
Query: 168 SL----EEVPFAAASIGQVHQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLA----VLKM 219
EE A G+ + +R +++ Q + Q LA ++++
Sbjct: 1661 EAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQ--RQLAEGTAQQRLAAEQELIRL 1718
Query: 220 SAALPAGLFAEQSLQALQQELAWECDYRREAACAQNFRQLL 260
A G EQ Q L++ELA +REAA A RQ L
Sbjct: 1719 RAETEQG---EQQRQLLEEELA---RLQREAAAATQKRQEL 1753
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 30.4 bits (67), Expect = 3.9
Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 29/221 (13%)
Query: 56 EEDIRRAREARPRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSM 115
EE RR R+A + + Q++ + +R A S+ A+F L + E +
Sbjct: 1550 EEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQ 1609
Query: 116 PGGRLQSDNSFISPQLQHIFERVRQSAD-FMPRWQM-------LRVLEEELGRDWQAKVA 167
+ + Q Q ER R+ A+ + RWQ+ LR+ EE+ + A
Sbjct: 1610 -----LREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQA 1664
Query: 168 SL----EEVPFAAASIGQVHQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLA----VLKM 219
EE A G+ + +R +++ Q + Q LA ++++
Sbjct: 1665 EAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQ--RQLAEGTAQQRLAAEQELIRL 1722
Query: 220 SAALPAGLFAEQSLQALQQELAWECDYRREAACAQNFRQLL 260
A G EQ Q L++ELA +REAA A RQ L
Sbjct: 1723 RAETEQG---EQQRQLLEEELA---RLQREAAAATQKRQEL 1757
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 30.4 bits (67), Expect = 3.9
Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 29/221 (13%)
Query: 56 EEDIRRAREARPRKTPRPQLSDRSRERKVPASRISRLANFGGLAVGLGLGVLAEMAKKSM 115
EE RR R+A + + Q++ + +R A S+ A+F L + E +
Sbjct: 1546 EEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQ 1605
Query: 116 PGGRLQSDNSFISPQLQHIFERVRQSAD-FMPRWQM-------LRVLEEELGRDWQAKVA 167
+ + Q Q ER R+ A+ + RWQ+ LR+ EE+ + A
Sbjct: 1606 -----LREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQA 1660
Query: 168 SL----EEVPFAAASIGQVHQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLA----VLKM 219
EE A G+ + +R +++ Q + Q LA ++++
Sbjct: 1661 EAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQ--RQLAEGTAQQRLAAEQELIRL 1718
Query: 220 SAALPAGLFAEQSLQALQQELAWECDYRREAACAQNFRQLL 260
A G EQ Q L++ELA +REAA A RQ L
Sbjct: 1719 RAETEQG---EQQRQLLEEELA---RLQREAAAATQKRQEL 1753
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,902,791
Number of Sequences: 37866
Number of extensions: 999183
Number of successful extensions: 2633
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2607
Number of HSP's gapped (non-prelim): 49
length of query: 503
length of database: 18,247,518
effective HSP length: 107
effective length of query: 396
effective length of database: 14,195,856
effective search space: 5621558976
effective search space used: 5621558976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.