Search of human proteins with 217330592

Search of human proteins with 217330592

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|217330592 LGP1 homolog isoform 2 [Homo sapiens]
         (491 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|217330592 LGP1 homolog isoform 2 [Homo sapiens]                    986   0.0  
gi|14210490 LGP1 homolog isoform 1 [Homo sapiens]                     967   0.0  
gi|217330596 LGP1 homolog isoform 3 [Homo sapiens]                    764   0.0  
gi|239751407 PREDICTED: hypothetical protein XP_002347839 [Homo ...    35   0.20 
gi|39777606 Rho guanine nucleotide exchange factor 1 isoform 1 [...    33   0.45 
gi|39777604 Rho guanine nucleotide exchange factor 1 isoform 3 [...    33   0.45 
gi|15011972 Rho guanine nucleotide exchange factor 1 isoform 2 [...    33   0.45 
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]       33   0.59 
gi|239757149 PREDICTED: hypothetical protein [Homo sapiens]            32   1.0  
gi|239751657 PREDICTED: hypothetical protein XP_002347944 [Homo ...    32   1.0  
gi|239746163 PREDICTED: hypothetical protein XP_002343666 [Homo ...    32   1.0  
gi|190014625 DIS3 mitotic control isoform b [Homo sapiens]             32   1.0  
gi|190014623 DIS3 mitotic control isoform a [Homo sapiens]             32   1.0  
gi|52353306 leucine rich repeat containing 55 [Homo sapiens]           32   1.7  
gi|25282391 nurim [Homo sapiens]                                       31   2.2  
gi|25952118 calcium/calmodulin-dependent protein kinase II alpha...    30   3.8  
gi|25952114 calcium/calmodulin-dependent protein kinase II alpha...    30   3.8  
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa...    30   3.8  
gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa...    30   3.8  
gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo ...    30   5.0  
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              30   5.0  
gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens]    30   6.5  
gi|116642878 hypothetical protein LOC400223 [Homo sapiens]             30   6.5  
gi|11545912 nucleotide-binding oligomerization domain containing...    29   8.5  
gi|145275206 methyltransferase like 4 [Homo sapiens]                   29   8.5  

>gi|217330592 LGP1 homolog isoform 2 [Homo sapiens]
          Length = 491

 Score =  986 bits (2550), Expect = 0.0
 Identities = 491/491 (100%), Positives = 491/491 (100%)

Query: 1   MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL 60
           MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL
Sbjct: 1   MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL 60

Query: 61  HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKAYPEVLAQGRTARVTLTSP 120
           HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKAYPEVLAQGRTARVTLTSP
Sbjct: 61  HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKAYPEVLAQGRTARVTLTSP 120

Query: 121 WPRPLPWPGNTLGQVGTPGTKDPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEE 180
           WPRPLPWPGNTLGQVGTPGTKDPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEE
Sbjct: 121 WPRPLPWPGNTLGQVGTPGTKDPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEE 180

Query: 181 LAGAIAAGNPGAPLRERAAELREALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGA 240
           LAGAIAAGNPGAPLRERAAELREALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGA
Sbjct: 181 LAGAIAAGNPGAPLRERAAELREALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGA 240

Query: 241 LWCQGLAFFSPAYAASGGVLGLNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLL 300
           LWCQGLAFFSPAYAASGGVLGLNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLL
Sbjct: 241 LWCQGLAFFSPAYAASGGVLGLNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLL 300

Query: 301 LAEAQQGKEYELVLTDRASLTRCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGE 360
           LAEAQQGKEYELVLTDRASLTRCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGE
Sbjct: 301 LAEAQQGKEYELVLTDRASLTRCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGE 360

Query: 361 DLFSEALGRAVGQWAGAKLLDHGCVESSILDSSAGSAPHYEVFVALRGLRNLSEENRDKL 420
           DLFSEALGRAVGQWAGAKLLDHGCVESSILDSSAGSAPHYEVFVALRGLRNLSEENRDKL
Sbjct: 361 DLFSEALGRAVGQWAGAKLLDHGCVESSILDSSAGSAPHYEVFVALRGLRNLSEENRDKL 420

Query: 421 DHCLQEASPRYKSLRFWGSVGPARVHLVGQGAFRALRAALAACPSSPFPPAMPRVLRHRH 480
           DHCLQEASPRYKSLRFWGSVGPARVHLVGQGAFRALRAALAACPSSPFPPAMPRVLRHRH
Sbjct: 421 DHCLQEASPRYKSLRFWGSVGPARVHLVGQGAFRALRAALAACPSSPFPPAMPRVLRHRH 480

Query: 481 LAQCLQERVVS 491
           LAQCLQERVVS
Sbjct: 481 LAQCLQERVVS 491


>gi|14210490 LGP1 homolog isoform 1 [Homo sapiens]
          Length = 530

 Score =  967 bits (2500), Expect = 0.0
 Identities = 491/530 (92%), Positives = 491/530 (92%), Gaps = 39/530 (7%)

Query: 1   MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL 60
           MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL
Sbjct: 1   MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL 60

Query: 61  HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKA------------------ 102
           HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKA                  
Sbjct: 61  HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKASQTQQEDSGEQPLPPTSN 120

Query: 103 ---------------------YPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK 141
                                YPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK
Sbjct: 121 QDLGEASLQATLLGLAALNKAYPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK 180

Query: 142 DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL 201
           DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL
Sbjct: 181 DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL 240

Query: 202 REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG 261
           REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG
Sbjct: 241 REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG 300

Query: 262 LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT 321
           LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT
Sbjct: 301 LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT 360

Query: 322 RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD 381
           RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD
Sbjct: 361 RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD 420

Query: 382 HGCVESSILDSSAGSAPHYEVFVALRGLRNLSEENRDKLDHCLQEASPRYKSLRFWGSVG 441
           HGCVESSILDSSAGSAPHYEVFVALRGLRNLSEENRDKLDHCLQEASPRYKSLRFWGSVG
Sbjct: 421 HGCVESSILDSSAGSAPHYEVFVALRGLRNLSEENRDKLDHCLQEASPRYKSLRFWGSVG 480

Query: 442 PARVHLVGQGAFRALRAALAACPSSPFPPAMPRVLRHRHLAQCLQERVVS 491
           PARVHLVGQGAFRALRAALAACPSSPFPPAMPRVLRHRHLAQCLQERVVS
Sbjct: 481 PARVHLVGQGAFRALRAALAACPSSPFPPAMPRVLRHRHLAQCLQERVVS 530


>gi|217330596 LGP1 homolog isoform 3 [Homo sapiens]
          Length = 474

 Score =  764 bits (1972), Expect = 0.0
 Identities = 390/430 (90%), Positives = 391/430 (90%), Gaps = 39/430 (9%)

Query: 1   MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL 60
           MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL
Sbjct: 1   MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTL 60

Query: 61  HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKA------------------ 102
           HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKA                  
Sbjct: 61  HVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKASQTQQEDSGEQPLPPTSN 120

Query: 103 ---------------------YPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK 141
                                YPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK
Sbjct: 121 QDLGEASLQATLLGLAALNKAYPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTK 180

Query: 142 DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL 201
           DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL
Sbjct: 181 DPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAEL 240

Query: 202 REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG 261
           REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG
Sbjct: 241 REALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLG 300

Query: 262 LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT 321
           LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT
Sbjct: 301 LNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLT 360

Query: 322 RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD 381
           RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD
Sbjct: 361 RCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLD 420

Query: 382 HGCVESSILD 391
           HGCVESSIL+
Sbjct: 421 HGCVESSILE 430


>gi|239751407 PREDICTED: hypothetical protein XP_002347839 [Homo
           sapiens]
          Length = 490

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 4/112 (3%)

Query: 126 PWPGNTLGQVGTPGTKDPRALLLDALRSPGLRALEAGTAVEL-LDVFLGLET-DGEELAG 183
           P PG  +   G  G + P+  L    + PG     AG    L +DV L ++  D +++  
Sbjct: 104 PRPGLPVQAAGCAGARCPQGWLKSG-KGPGPPEARAGIRPRLTVDVGLLVDLRDAQQIRT 162

Query: 184 AIAAGNPGAPLRERAAELREALEQGPRGLALRLWPKLQVVVTLDAGGQAEAV 235
            + A  PG P R+R  E++      P        P     +TLD G +A A+
Sbjct: 163 LLLAAGPGLPPRQRGLEVKLVAAHQPPSRNTAPAPTAPTALTLD-GAEAPAL 213


>gi|39777606 Rho guanine nucleotide exchange factor 1 isoform 1
           [Homo sapiens]
          Length = 927

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 26/174 (14%)

Query: 136 GTPGTKDPRALLLDA-LRSPGLRALEAGTAVELLDVFLGL---ETDGEELAGAIAAGNPG 191
           G P   D R L  +     PG    + G  +   D  +G    +T G  L          
Sbjct: 292 GEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPLSLDSPDR 351

Query: 192 APLRERAAELREALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSP 251
            P  +   EL ++  QGP  L     P+     + D G + E+                P
Sbjct: 352 EPGADAPLELGDSSPQGPMSLESLAPPE-----STDEGAETESP--------------EP 392

Query: 252 AYAASGGVLGLNLQPEQPHG-LYLLPPGAPFIELLPVKEGTQEEAASTLLLAEA 304
                 G  GL L+PE+P G   L+PP    +  LP  +  ++E  S LL+ EA
Sbjct: 393 GDEGEPGRSGLELEPEEPPGWRELVPPDT--LHSLPKSQVKRQEVISELLVTEA 444


>gi|39777604 Rho guanine nucleotide exchange factor 1 isoform 3
           [Homo sapiens]
          Length = 879

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 26/174 (14%)

Query: 136 GTPGTKDPRALLLDA-LRSPGLRALEAGTAVELLDVFLGL---ETDGEELAGAIAAGNPG 191
           G P   D R L  +     PG    + G  +   D  +G    +T G  L          
Sbjct: 244 GEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPLSLDSPDR 303

Query: 192 APLRERAAELREALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSP 251
            P  +   EL ++  QGP  L     P+     + D G + E+                P
Sbjct: 304 EPGADAPLELGDSSPQGPMSLESLAPPE-----STDEGAETESP--------------EP 344

Query: 252 AYAASGGVLGLNLQPEQPHG-LYLLPPGAPFIELLPVKEGTQEEAASTLLLAEA 304
                 G  GL L+PE+P G   L+PP    +  LP  +  ++E  S LL+ EA
Sbjct: 345 GDEGEPGRSGLELEPEEPPGWRELVPPDT--LHSLPKSQVKRQEVISELLVTEA 396


>gi|15011972 Rho guanine nucleotide exchange factor 1 isoform 2
           [Homo sapiens]
          Length = 912

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 26/174 (14%)

Query: 136 GTPGTKDPRALLLDA-LRSPGLRALEAGTAVELLDVFLGL---ETDGEELAGAIAAGNPG 191
           G P   D R L  +     PG    + G  +   D  +G    +T G  L          
Sbjct: 277 GEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPLSLDSPDR 336

Query: 192 APLRERAAELREALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSP 251
            P  +   EL ++  QGP  L     P+     + D G + E+                P
Sbjct: 337 EPGADAPLELGDSSPQGPMSLESLAPPE-----STDEGAETESP--------------EP 377

Query: 252 AYAASGGVLGLNLQPEQPHG-LYLLPPGAPFIELLPVKEGTQEEAASTLLLAEA 304
                 G  GL L+PE+P G   L+PP    +  LP  +  ++E  S LL+ EA
Sbjct: 378 GDEGEPGRSGLELEPEEPPGWRELVPPDT--LHSLPKSQVKRQEVISELLVTEA 429


>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
          Length = 2217

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 35/104 (33%), Positives = 40/104 (38%), Gaps = 6/104 (5%)

Query: 98   PLTKAYPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTKDPRALLLDALRS-PGL 156
            PL  + P V A  +      TS  P P      T  Q G PGT  P+ L  +   S P  
Sbjct: 1383 PLAPSSPPVTALPQDGAAPATSTMPEP---ASGTASQAGGPGT--PQGLTSELETSQPLA 1437

Query: 157  RALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAE 200
               EA  AV+ L V L   T   E A    A  P  PL   A E
Sbjct: 1438 ETHEAPLAVQPLVVGLAPCTPAPEAASTRDASAPREPLPPPAPE 1481


>gi|239757149 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 72

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 125 LPWPGNTLGQVGTPGTKDPRALLLDA-------LRSPGLRA 158
           LPWP + LG+ G  GT  PR L  +A       LR PG+ A
Sbjct: 3   LPWPPHNLGRRGAAGTALPRGLRTEAAVAAQGRLRMPGVPA 43


>gi|239751657 PREDICTED: hypothetical protein XP_002347944 [Homo
           sapiens]
          Length = 72

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 125 LPWPGNTLGQVGTPGTKDPRALLLDA-------LRSPGLRA 158
           LPWP + LG+ G  GT  PR L  +A       LR PG+ A
Sbjct: 3   LPWPPHNLGRRGAAGTALPRGLRTEAAVAAQGRLRMPGVPA 43


>gi|239746163 PREDICTED: hypothetical protein XP_002343666 [Homo
           sapiens]
          Length = 72

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 125 LPWPGNTLGQVGTPGTKDPRALLLDA-------LRSPGLRA 158
           LPWP + LG+ G  GT  PR L  +A       LR PG+ A
Sbjct: 3   LPWPPHNLGRRGAAGTALPRGLRTEAAVAAQGRLRMPGVPA 43


>gi|190014625 DIS3 mitotic control isoform b [Homo sapiens]
          Length = 928

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 13/82 (15%)

Query: 79  RPHCSLRRSTDISTFRNHL--PLTKAYPEVLAQGRTAR-------VTLTSPWPRPLPWPG 129
           RP+C +   +DI   R HL  P  K  P +  + R A        +     WPR   +P 
Sbjct: 324 RPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASTLEGRRIIVAIDGWPRNSRYPN 383

Query: 130 ----NTLGQVGTPGTKDPRALL 147
                 LG VG   T+    LL
Sbjct: 384 GHFVRNLGDVGEKETETEVLLL 405


>gi|190014623 DIS3 mitotic control isoform a [Homo sapiens]
          Length = 958

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 13/82 (15%)

Query: 79  RPHCSLRRSTDISTFRNHL--PLTKAYPEVLAQGRTAR-------VTLTSPWPRPLPWPG 129
           RP+C +   +DI   R HL  P  K  P +  + R A        +     WPR   +P 
Sbjct: 354 RPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASTLEGRRIIVAIDGWPRNSRYPN 413

Query: 130 ----NTLGQVGTPGTKDPRALL 147
                 LG VG   T+    LL
Sbjct: 414 GHFVRNLGDVGEKETETEVLLL 435


>gi|52353306 leucine rich repeat containing 55 [Homo sapiens]
          Length = 341

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 125 LPWPGNTLGQVGTPGTKDPRALLLDALRSPGLRALEAGTAVELL 168
           LP  G+T  Q+  PG   P  LL+  L + GL   +AGT+  +L
Sbjct: 41  LPKMGDTWAQLPWPGPPHPAMLLISLLLAAGLMHSDAGTSCPVL 84


>gi|25282391 nurim [Homo sapiens]
          Length = 262

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 31/115 (26%), Positives = 39/115 (33%), Gaps = 7/115 (6%)

Query: 12  LLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTLHVHQSQQQALR 71
           L P L  + +    DAR  WLA LQ R     L W        L    L V Q    A  
Sbjct: 31  LRPLLGGIPESGGPDARQGWLAALQDRSILAPLAW-------DLGLLLLFVGQHSLMAAE 83

Query: 72  WCLQGAQRPHCSLRRSTDISTFRNHLPLTKAYPEVLAQGRTARVTLTSPWPRPLP 126
                  R    L+RS  ++     L L   Y E + +G         PW   +P
Sbjct: 84  RVKAWTSRYFGVLQRSLYVACTALALQLVMRYWEPIPKGPVLWEARAEPWATWVP 138


>gi|25952118 calcium/calmodulin-dependent protein kinase II alpha
           isoform 2 [Homo sapiens]
          Length = 478

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 11/58 (18%)

Query: 162 GTAVELLDVFLGLETDGEELAGAIAAGNPG--APLRERAAELREALEQGPRGLALRLW 217
           G AV+L D  L +E +GE+ A    AG PG  +P         E L + P G  + LW
Sbjct: 149 GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSP---------EVLRKDPYGKPVDLW 197


>gi|25952114 calcium/calmodulin-dependent protein kinase II alpha
           isoform 1 [Homo sapiens]
          Length = 489

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 11/58 (18%)

Query: 162 GTAVELLDVFLGLETDGEELAGAIAAGNPG--APLRERAAELREALEQGPRGLALRLW 217
           G AV+L D  L +E +GE+ A    AG PG  +P         E L + P G  + LW
Sbjct: 149 GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSP---------EVLRKDPYGKPVDLW 197


>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
           sapiens]
          Length = 1690

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%)

Query: 385 VESSILDSSAGSAPHYEVFVALRGLRNL---SEENRDKLDHCLQEASPRY 431
           V   ++DS  G APH+ V  A+  L+ L   SE   +K   CLQ A PR+
Sbjct: 921 VMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQ-ARPRH 969


>gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo
           sapiens]
          Length = 1641

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%)

Query: 385 VESSILDSSAGSAPHYEVFVALRGLRNL---SEENRDKLDHCLQEASPRY 431
           V   ++DS  G APH+ V  A+  L+ L   SE   +K   CLQ A PR+
Sbjct: 921 VMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQ-ARPRH 969


>gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo
           sapiens]
          Length = 262

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 124 PLPWP-GNTLGQVGTPGTKDPRALLLDALRSPGLRALE 160
           P+P P G+ L ++G P  + P    +   RSP LR+LE
Sbjct: 164 PVPGPRGSRLSKLGGPHARSPHGNRVPQARSPALRSLE 201


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 103 YPEVLAQGRT-ARVTLTSPWPRPLPWP--GNTLGQVGTPGTK 141
           +PE  A G   +R  L  P PRPLPWP   + + ++ TP  K
Sbjct: 841 FPENGAPGPPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPPK 882


>gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens]
          Length = 4861

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 10/96 (10%)

Query: 193 PLRERAAELREALEQGP-RGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSP 251
           PLRER   L   L QGP R  +L    ++Q+ + L +      VA+L       L + SP
Sbjct: 856 PLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVASL-------LGYSSP 908

Query: 252 AYAA--SGGVLGLNLQPEQPHGLYLLPPGAPFIELL 285
           + AA  S    G     +QP+G     P     E+L
Sbjct: 909 SDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEIL 944


>gi|116642878 hypothetical protein LOC400223 [Homo sapiens]
          Length = 166

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 27/74 (36%), Positives = 31/74 (41%), Gaps = 9/74 (12%)

Query: 98  PLTKAYPEVLAQGRTARVTLTS-------PWPRPLPWPGNTLGQVGTPGTKDPRALLLDA 150
           P T  +P  LAQ RT+  T TS       P PR      N  G    PGT++P   L   
Sbjct: 12  PKTFTFP--LAQNRTSHPTTTSKLKYLGRPSPRRDALQANGEGPEVGPGTEEPAHRLPVG 69

Query: 151 LRSPGLRALEAGTA 164
             S G  A   GTA
Sbjct: 70  SGSAGEAAASLGTA 83


>gi|11545912 nucleotide-binding oligomerization domain containing 2
           [Homo sapiens]
          Length = 1040

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 11/67 (16%)

Query: 17  ALLRQQRSQDARLS--WLAGLQHRVAWGALVWAATWQRRRLEQSTLHVHQSQQQALRWCL 74
           ALL++    + +++  +LAGL  R  WG L    T ++  L          +Q   RWCL
Sbjct: 661 ALLQKAEPHNLQITAAFLAGLLSREHWGLLAECQTSEKALLR---------RQACARWCL 711

Query: 75  QGAQRPH 81
             + R H
Sbjct: 712 ARSLRKH 718


>gi|145275206 methyltransferase like 4 [Homo sapiens]
          Length = 472

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 14/113 (12%)

Query: 35  LQHRVAWGALVWAATWQRRRLEQSTLHVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFR 94
           L +R  +  +V    WQ + +++S  + + S  Q  +  +     P+C L   T ++  +
Sbjct: 275 LNYRKTFDVIVIDPPWQNKSVKRSNRYSYLSPLQIQQIPIPKLAAPNCLL--VTWVTNRQ 332

Query: 95  NHLPLTK--AYP----EVLAQGRTARVTLTSPWPRPL------PWPGNTLGQV 135
            HL   K   YP    EV+A+    ++T +  +  PL      P+ G  LG+V
Sbjct: 333 KHLRFIKEELYPSWSVEVVAEWHWVKITNSGEFVFPLDSPHKKPYEGLILGRV 385


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,950,407
Number of Sequences: 37866
Number of extensions: 965674
Number of successful extensions: 3281
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3268
Number of HSP's gapped (non-prelim): 31
length of query: 491
length of database: 18,247,518
effective HSP length: 106
effective length of query: 385
effective length of database: 14,233,722
effective search space: 5479982970
effective search space used: 5479982970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.