Search of human proteins with 217330589

Search of human proteins with 217330589

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|217330589 transforming growth factor, beta receptor
associated protein 1 [Homo sapiens]
         (860 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|217330589 transforming growth factor, beta receptor associate...  1721   0.0  
gi|21359865 transforming growth factor, beta receptor associated...  1721   0.0  
gi|54234024 vacuolar protein sorting 39 [Homo sapiens]                212   1e-54
gi|226246554 hypothetical protein LOC643677 [Homo sapiens]             36   0.13 
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap...    36   0.13 
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap...    36   0.13 
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap...    36   0.13 
gi|87298937 centrosomal protein 110kDa [Homo sapiens]                  35   0.30 
gi|37221184 krev interaction trapped 1 isoform 1 [Homo sapiens]        33   1.1  
gi|37221182 krev interaction trapped 1 isoform 1 [Homo sapiens]        33   1.1  
gi|37221187 krev interaction trapped 1 isoform 1 [Homo sapiens]        33   1.1  
gi|31581522 krev interaction trapped 1 isoform 1 [Homo sapiens]        33   1.1  
gi|61742817 krev interaction trapped 1 isoform 2 [Homo sapiens]        33   1.1  
gi|112421122 DnaJ (Hsp40) homolog, subfamily C, member 13 [Homo ...    33   1.5  
gi|34915994 transducin-like enhancer protein 4 [Homo sapiens]          32   3.3  
gi|239750002 PREDICTED: hypothetical protein XP_002347250 [Homo ...    31   4.3  
gi|239744313 PREDICTED: hypothetical protein XP_002343115 [Homo ...    31   4.3  
gi|239755532 PREDICTED: similar to hCG1990723 [Homo sapiens]           30   7.3  
gi|42544121 vacuolar protein sorting 13C protein isoform 1A [Hom...    30   7.3  
gi|66348091 vacuolar protein sorting 13C protein isoform 1B [Hom...    30   7.3  
gi|239757786 PREDICTED: hypothetical protein [Homo sapiens]            30   9.6  
gi|70887790 DNA-directed DNA polymerase gamma 2 [Homo sapiens]         30   9.6  
gi|56549645 nucleoporin 98kD isoform 4 [Homo sapiens]                  30   9.6  
gi|210147457 intermediate filament family orphan 2 [Homo sapiens]      30   9.6  

>gi|217330589 transforming growth factor, beta receptor associated
           protein 1 [Homo sapiens]
          Length = 860

 Score = 1721 bits (4458), Expect = 0.0
 Identities = 860/860 (100%), Positives = 860/860 (100%)

Query: 1   MMSIKAFTLVSAVERELLMGDKERVNIECVECCGRDLYVGTNDCFVYHFLLEERPVPAGP 60
           MMSIKAFTLVSAVERELLMGDKERVNIECVECCGRDLYVGTNDCFVYHFLLEERPVPAGP
Sbjct: 1   MMSIKAFTLVSAVERELLMGDKERVNIECVECCGRDLYVGTNDCFVYHFLLEERPVPAGP 60

Query: 61  ATFTATKQLQRHLGFKKPVNELRAASALNRLLVLCDNSISLVNMLNLEPVPSGARIKGAA 120
           ATFTATKQLQRHLGFKKPVNELRAASALNRLLVLCDNSISLVNMLNLEPVPSGARIKGAA
Sbjct: 61  ATFTATKQLQRHLGFKKPVNELRAASALNRLLVLCDNSISLVNMLNLEPVPSGARIKGAA 120

Query: 121 TFALNENPVSGDPFCVEVCIISVKRRTIQMFLVYEDRVQIVKEVSTAEQPLAVAVDGHFL 180
           TFALNENPVSGDPFCVEVCIISVKRRTIQMFLVYEDRVQIVKEVSTAEQPLAVAVDGHFL
Sbjct: 121 TFALNENPVSGDPFCVEVCIISVKRRTIQMFLVYEDRVQIVKEVSTAEQPLAVAVDGHFL 180

Query: 181 CLALTTQYIIHNYSTGVSQDLFPYCSEERPPIVKRIGRQEFLLAGPGGLGMFATVAGISQ 240
           CLALTTQYIIHNYSTGVSQDLFPYCSEERPPIVKRIGRQEFLLAGPGGLGMFATVAGISQ
Sbjct: 181 CLALTTQYIIHNYSTGVSQDLFPYCSEERPPIVKRIGRQEFLLAGPGGLGMFATVAGISQ 240

Query: 241 RAPVHWSENVIGAAVSFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA 300
           RAPVHWSENVIGAAVSFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA
Sbjct: 241 RAPVHWSENVIGAAVSFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA 300

Query: 301 TSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ 360
           TSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ
Sbjct: 301 TSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ 360

Query: 361 FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEK 420
           FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEK
Sbjct: 361 FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEK 420

Query: 421 MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDSA 480
           MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDSA
Sbjct: 421 MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDSA 480

Query: 481 AWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIVNGDVQDSTRSDLYEYIVDFLTYCLDEE 540
           AWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIVNGDVQDSTRSDLYEYIVDFLTYCLDEE
Sbjct: 481 AWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIVNGDVQDSTRSDLYEYIVDFLTYCLDEE 540

Query: 541 LVWAYADWVLQKSEEVGVQVFTKRPLDEQQKNSFNPDDIINCLKKYPKALVKYLEHLVID 600
           LVWAYADWVLQKSEEVGVQVFTKRPLDEQQKNSFNPDDIINCLKKYPKALVKYLEHLVID
Sbjct: 541 LVWAYADWVLQKSEEVGVQVFTKRPLDEQQKNSFNPDDIINCLKKYPKALVKYLEHLVID 600

Query: 601 KRLQKEEYHTHLAVLYLEEVLLQRASASGKGAEATETQAKLRRLLQKSDLYRVHFLLERL 660
           KRLQKEEYHTHLAVLYLEEVLLQRASASGKGAEATETQAKLRRLLQKSDLYRVHFLLERL
Sbjct: 601 KRLQKEEYHTHLAVLYLEEVLLQRASASGKGAEATETQAKLRRLLQKSDLYRVHFLLERL 660

Query: 661 QGAGLPMESAILHGKLGEHEKALHILVHELQDFAAAEDYCLWCSEGRDPPHRQQLFHTLL 720
           QGAGLPMESAILHGKLGEHEKALHILVHELQDFAAAEDYCLWCSEGRDPPHRQQLFHTLL
Sbjct: 661 QGAGLPMESAILHGKLGEHEKALHILVHELQDFAAAEDYCLWCSEGRDPPHRQQLFHTLL 720

Query: 721 AIYLHAGPTAHELAVAAVDLLNRHATEFDAAQVLQMLPDTWSVQLLCPFLMGAMRDSIHA 780
           AIYLHAGPTAHELAVAAVDLLNRHATEFDAAQVLQMLPDTWSVQLLCPFLMGAMRDSIHA
Sbjct: 721 AIYLHAGPTAHELAVAAVDLLNRHATEFDAAQVLQMLPDTWSVQLLCPFLMGAMRDSIHA 780

Query: 781 RRTMQVALGLARSENLIYTYDKMKLKGSSIQLSDKKLCQICQNPFCEPVFVRYPNGGLVH 840
           RRTMQVALGLARSENLIYTYDKMKLKGSSIQLSDKKLCQICQNPFCEPVFVRYPNGGLVH
Sbjct: 781 RRTMQVALGLARSENLIYTYDKMKLKGSSIQLSDKKLCQICQNPFCEPVFVRYPNGGLVH 840

Query: 841 THCAASRHTNPSSSSPGTRT 860
           THCAASRHTNPSSSSPGTRT
Sbjct: 841 THCAASRHTNPSSSSPGTRT 860


>gi|21359865 transforming growth factor, beta receptor associated
           protein 1 [Homo sapiens]
          Length = 860

 Score = 1721 bits (4458), Expect = 0.0
 Identities = 860/860 (100%), Positives = 860/860 (100%)

Query: 1   MMSIKAFTLVSAVERELLMGDKERVNIECVECCGRDLYVGTNDCFVYHFLLEERPVPAGP 60
           MMSIKAFTLVSAVERELLMGDKERVNIECVECCGRDLYVGTNDCFVYHFLLEERPVPAGP
Sbjct: 1   MMSIKAFTLVSAVERELLMGDKERVNIECVECCGRDLYVGTNDCFVYHFLLEERPVPAGP 60

Query: 61  ATFTATKQLQRHLGFKKPVNELRAASALNRLLVLCDNSISLVNMLNLEPVPSGARIKGAA 120
           ATFTATKQLQRHLGFKKPVNELRAASALNRLLVLCDNSISLVNMLNLEPVPSGARIKGAA
Sbjct: 61  ATFTATKQLQRHLGFKKPVNELRAASALNRLLVLCDNSISLVNMLNLEPVPSGARIKGAA 120

Query: 121 TFALNENPVSGDPFCVEVCIISVKRRTIQMFLVYEDRVQIVKEVSTAEQPLAVAVDGHFL 180
           TFALNENPVSGDPFCVEVCIISVKRRTIQMFLVYEDRVQIVKEVSTAEQPLAVAVDGHFL
Sbjct: 121 TFALNENPVSGDPFCVEVCIISVKRRTIQMFLVYEDRVQIVKEVSTAEQPLAVAVDGHFL 180

Query: 181 CLALTTQYIIHNYSTGVSQDLFPYCSEERPPIVKRIGRQEFLLAGPGGLGMFATVAGISQ 240
           CLALTTQYIIHNYSTGVSQDLFPYCSEERPPIVKRIGRQEFLLAGPGGLGMFATVAGISQ
Sbjct: 181 CLALTTQYIIHNYSTGVSQDLFPYCSEERPPIVKRIGRQEFLLAGPGGLGMFATVAGISQ 240

Query: 241 RAPVHWSENVIGAAVSFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA 300
           RAPVHWSENVIGAAVSFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA
Sbjct: 241 RAPVHWSENVIGAAVSFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA 300

Query: 301 TSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ 360
           TSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ
Sbjct: 301 TSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ 360

Query: 361 FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEK 420
           FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEK
Sbjct: 361 FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEK 420

Query: 421 MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDSA 480
           MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDSA
Sbjct: 421 MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDSA 480

Query: 481 AWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIVNGDVQDSTRSDLYEYIVDFLTYCLDEE 540
           AWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIVNGDVQDSTRSDLYEYIVDFLTYCLDEE
Sbjct: 481 AWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIVNGDVQDSTRSDLYEYIVDFLTYCLDEE 540

Query: 541 LVWAYADWVLQKSEEVGVQVFTKRPLDEQQKNSFNPDDIINCLKKYPKALVKYLEHLVID 600
           LVWAYADWVLQKSEEVGVQVFTKRPLDEQQKNSFNPDDIINCLKKYPKALVKYLEHLVID
Sbjct: 541 LVWAYADWVLQKSEEVGVQVFTKRPLDEQQKNSFNPDDIINCLKKYPKALVKYLEHLVID 600

Query: 601 KRLQKEEYHTHLAVLYLEEVLLQRASASGKGAEATETQAKLRRLLQKSDLYRVHFLLERL 660
           KRLQKEEYHTHLAVLYLEEVLLQRASASGKGAEATETQAKLRRLLQKSDLYRVHFLLERL
Sbjct: 601 KRLQKEEYHTHLAVLYLEEVLLQRASASGKGAEATETQAKLRRLLQKSDLYRVHFLLERL 660

Query: 661 QGAGLPMESAILHGKLGEHEKALHILVHELQDFAAAEDYCLWCSEGRDPPHRQQLFHTLL 720
           QGAGLPMESAILHGKLGEHEKALHILVHELQDFAAAEDYCLWCSEGRDPPHRQQLFHTLL
Sbjct: 661 QGAGLPMESAILHGKLGEHEKALHILVHELQDFAAAEDYCLWCSEGRDPPHRQQLFHTLL 720

Query: 721 AIYLHAGPTAHELAVAAVDLLNRHATEFDAAQVLQMLPDTWSVQLLCPFLMGAMRDSIHA 780
           AIYLHAGPTAHELAVAAVDLLNRHATEFDAAQVLQMLPDTWSVQLLCPFLMGAMRDSIHA
Sbjct: 721 AIYLHAGPTAHELAVAAVDLLNRHATEFDAAQVLQMLPDTWSVQLLCPFLMGAMRDSIHA 780

Query: 781 RRTMQVALGLARSENLIYTYDKMKLKGSSIQLSDKKLCQICQNPFCEPVFVRYPNGGLVH 840
           RRTMQVALGLARSENLIYTYDKMKLKGSSIQLSDKKLCQICQNPFCEPVFVRYPNGGLVH
Sbjct: 781 RRTMQVALGLARSENLIYTYDKMKLKGSSIQLSDKKLCQICQNPFCEPVFVRYPNGGLVH 840

Query: 841 THCAASRHTNPSSSSPGTRT 860
           THCAASRHTNPSSSSPGTRT
Sbjct: 841 THCAASRHTNPSSSSPGTRT 860


>gi|54234024 vacuolar protein sorting 39 [Homo sapiens]
          Length = 875

 Score =  212 bits (540), Expect = 1e-54
 Identities = 221/884 (25%), Positives = 397/884 (44%), Gaps = 70/884 (7%)

Query: 21  DKERVNIECVECCGRDLYVGTNDCFVYHFLLEERPVPAGPATFTATKQLQRHLGFKKPVN 80
           +K  + I+C+      L VGT      H LL       G   F  T + + +  F K + 
Sbjct: 12  EKLPLQIDCLAAWEEWLLVGTKQG---HLLLYRIRKDVGCNRFEVTLE-KSNKNFSKKIQ 67

Query: 81  ELRAASALNRLLVLCDNSISLVNMLNLEPVPSGARIKGAATFALNENPVSGDPFCVEVCI 140
           ++   S    L+ L +N+I + ++L  + + + ++ KGA+ F  +          + +C+
Sbjct: 68  QIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGEEVLRMCV 127

Query: 141 ISVKRRTIQMFLVYEDRVQIVKEVSTAEQPLAVAVDGHFLCLALTTQY-IIHNYSTGVSQ 199
            +VK++    F    +  ++  + S  + P ++A   + +C+     Y +I     G  +
Sbjct: 128 -AVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIK 186

Query: 200 DLFPYCSEERPPIVKRIGRQEFLLAGPGGLGMFATVAGI-SQRAPVHWSENVIGAAVSFP 258
           +LFP   ++  P+V  +   + +  G   L +     GI +Q+  ++W++  +      P
Sbjct: 187 ELFP-TGKQLEPLVAPLADGK-VAVGQDDLTVVLNEEGICTQKCALNWTDIPVAMEHQPP 244

Query: 259 YVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVI-VATSKGVYILVPLPLEKQI 317
           Y+IA+   ++ + +   +   Q++  +    +      +I VA++  V+ L+P+P+  QI
Sbjct: 245 YIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPMATQI 304

Query: 318 QDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQFAQLQFLEAKELFRSGQ 377
           Q LL  ++ E AL LA+  + +   EK Q ++  I     F  F Q +F E+ ++F    
Sbjct: 305 QQLLQDKQFELALQLAE-MKDDSDSEKQQQIHH-IKNLYAFNLFCQKRFDESMQVFAKLG 362

Query: 378 LDVRELISLYPFLLPTSSSFTRSHP---PLHEYADLNQLTQGDQEKMAKCKRFLMSYLNE 434
            D   ++ LYP LLPT       +P   P+   A+L +      + + + +  L+  LN+
Sbjct: 363 TDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKLND 422

Query: 435 ----------VRSTEVANGYK---EDIDTALLKLYAEADHDSLLDLLVTEN-FCLLTDSA 480
                     +  T      K   + IDT LLK Y   +   +  LL  EN  C + +S 
Sbjct: 423 SDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESE 482

Query: 481 AWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIVNGDVQDSTRSDL--YEYIVDFLTYCLD 538
             L+K  KY  L +LY        A+Q+ V     D      S L  +E  V +L +   
Sbjct: 483 HVLKKAHKYSELIILYEKKGLHEKALQVLV-----DQSKKANSPLKGHERTVQYLQHLGT 537

Query: 539 EEL--VWAYADWVLQKSEEVGVQVFTKRPLDEQQKNSFNPDDIINCLKKYPKAL-VKYLE 595
           E L  +++Y+ WVL+   E G+++FT+   D  +  S   D ++  L +  K L + YLE
Sbjct: 538 ENLHLIFSYSVWVLRDFPEDGLKIFTE---DLPEVESLPRDRVLGFLIENFKGLAIPYLE 594

Query: 596 HLVIDKRLQKEEYHTHLAVLYLEEV--LLQR-----------ASASGKGAEATETQAKLR 642
           H++         +H  L  LY E+V  L++              A  +  E  E + KL 
Sbjct: 595 HIIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEYRQKLL 654

Query: 643 RLLQKSDLYRVHFLLERLQGAGLPMESAILHGKLGEHEKALHILVHELQDFAAAEDYCLW 702
             L+ S  Y    L+      GL  E A+L G++G+HE+AL I VH L+D   AE+YC  
Sbjct: 655 MFLEISSYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHK 714

Query: 703 CSEGRDPPHRQQLFHTLLAIYLHA------GPTAHELAV------AAVDLLNRHATEFDA 750
             + R+    + ++ +LL +YL        GP   EL        AA+ +L  H ++ D 
Sbjct: 715 HYD-RNKDGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPKANLQAALQVLELHHSKLDT 773

Query: 751 AQVLQMLPDTWSVQLLCPFLMGAMRDSIHARRTMQVALGLARSENLIYTYDKMKLKGSSI 810
            + L +LP    +  +  FL   + ++   +R  QV   L  +E L    +++  +    
Sbjct: 774 TKALNLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKC 833

Query: 811 QLSDKKLCQICQNPFCEPVFVRYPNGGLVHTHCAASRHTNPSSS 854
            ++++K+C +C+       F RYPNG +VH  C  S+  NP+ +
Sbjct: 834 IITEEKVCMVCKKKIGNSAFARYPNGVVVHYFC--SKEVNPADT 875


>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
          Length = 7081

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 18/56 (32%), Positives = 32/56 (57%)

Query: 596  HLVIDKRLQKEEYHTHLAVLYLEEVLLQRASASGKGAEATETQAKLRRLLQKSDLY 651
            HL +D R +K EY T +   YL E+  Q++S +G+ A+   ++  +   +QK+  Y
Sbjct: 4096 HLQLDTRREKAEYVTEITRYYLPELSHQKSSEAGEKADGVASKGDITIKVQKAKDY 4151


>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
          Length = 6929

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 18/56 (32%), Positives = 32/56 (57%)

Query: 596  HLVIDKRLQKEEYHTHLAVLYLEEVLLQRASASGKGAEATETQAKLRRLLQKSDLY 651
            HL +D R +K EY T +   YL E+  Q++S +G+ A+   ++  +   +QK+  Y
Sbjct: 4025 HLQLDTRREKAEYVTEITRYYLPELSHQKSSEAGEKADGVASKGDITIKVQKAKDY 4080


>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
          Length = 6929

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 18/56 (32%), Positives = 32/56 (57%)

Query: 596  HLVIDKRLQKEEYHTHLAVLYLEEVLLQRASASGKGAEATETQAKLRRLLQKSDLY 651
            HL +D R +K EY T +   YL E+  Q++S +G+ A+   ++  +   +QK+  Y
Sbjct: 4025 HLQLDTRREKAEYVTEITRYYLPELSHQKSSEAGEKADGVASKGDITIKVQKAKDY 4080


>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
          Length = 6929

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 18/56 (32%), Positives = 32/56 (57%)

Query: 596  HLVIDKRLQKEEYHTHLAVLYLEEVLLQRASASGKGAEATETQAKLRRLLQKSDLY 651
            HL +D R +K EY T +   YL E+  Q++S +G+ A+   ++  +   +QK+  Y
Sbjct: 4025 HLQLDTRREKAEYVTEITRYYLPELSHQKSSEAGEKADGVASKGDITIKVQKAKDY 4080


>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
          Length = 2325

 Score = 35.0 bits (79), Expect = 0.30
 Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 577  DDIINCLKKYPKALVKYLEHLVIDKRLQKEEYHTHLAVLYLEEVLLQ--RASASGKGAEA 634
            D    CL K  + L + L+ L  D  + +     HL VL   EVLLQ  RA      ++ 
Sbjct: 1530 DSDFQCLSKKKEKLTEELQKLQKDIEMAERNEDHHLQVLKESEVLLQAKRAELEKLKSQV 1589

Query: 635  TETQAKL----RRLLQKSDLYRVHFLLERLQGAGLPMESAILHGKLGEHEKALHI 685
            T  Q ++    R+L  K +   +H L   +  A   ++ A+  G+    EK  HI
Sbjct: 1590 TSQQQEMAVLDRQLGHKKE--ELHLLQGSMVQAKADLQEALRLGETEVTEKCNHI 1642


>gi|37221184 krev interaction trapped 1 isoform 1 [Homo sapiens]
          Length = 736

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 307 ILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQFAQLQF 366
           + +PL +EKQI+D LA       L+L   AR N+ K  +     +++  A  +       
Sbjct: 512 VRLPLEVEKQIEDPLA------ILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGN 565

Query: 367 LEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEKMAKCKR 426
            E+K+  + G L+   L S+ P     S +   ++  LHEY +L+  ++G  ++M   +R
Sbjct: 566 YESKK-HKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHEYKNLS-TSEGVSKEMHHLQR 623

Query: 427 FLMSYLNEV 435
             +    E+
Sbjct: 624 MFLQNCWEI 632


>gi|37221182 krev interaction trapped 1 isoform 1 [Homo sapiens]
          Length = 736

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 307 ILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQFAQLQF 366
           + +PL +EKQI+D LA       L+L   AR N+ K  +     +++  A  +       
Sbjct: 512 VRLPLEVEKQIEDPLA------ILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGN 565

Query: 367 LEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEKMAKCKR 426
            E+K+  + G L+   L S+ P     S +   ++  LHEY +L+  ++G  ++M   +R
Sbjct: 566 YESKK-HKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHEYKNLS-TSEGVSKEMHHLQR 623

Query: 427 FLMSYLNEV 435
             +    E+
Sbjct: 624 MFLQNCWEI 632


>gi|37221187 krev interaction trapped 1 isoform 1 [Homo sapiens]
          Length = 736

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 307 ILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQFAQLQF 366
           + +PL +EKQI+D LA       L+L   AR N+ K  +     +++  A  +       
Sbjct: 512 VRLPLEVEKQIEDPLA------ILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGN 565

Query: 367 LEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEKMAKCKR 426
            E+K+  + G L+   L S+ P     S +   ++  LHEY +L+  ++G  ++M   +R
Sbjct: 566 YESKK-HKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHEYKNLS-TSEGVSKEMHHLQR 623

Query: 427 FLMSYLNEV 435
             +    E+
Sbjct: 624 MFLQNCWEI 632


>gi|31581522 krev interaction trapped 1 isoform 1 [Homo sapiens]
          Length = 736

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 307 ILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQFAQLQF 366
           + +PL +EKQI+D LA       L+L   AR N+ K  +     +++  A  +       
Sbjct: 512 VRLPLEVEKQIEDPLA------ILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGN 565

Query: 367 LEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEKMAKCKR 426
            E+K+  + G L+   L S+ P     S +   ++  LHEY +L+  ++G  ++M   +R
Sbjct: 566 YESKK-HKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHEYKNLS-TSEGVSKEMHHLQR 623

Query: 427 FLMSYLNEV 435
             +    E+
Sbjct: 624 MFLQNCWEI 632


>gi|61742817 krev interaction trapped 1 isoform 2 [Homo sapiens]
          Length = 688

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 307 ILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQFAQLQF 366
           + +PL +EKQI+D LA       L+L   AR N+ K  +     +++  A  +       
Sbjct: 464 VRLPLEVEKQIEDPLA------ILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGN 517

Query: 367 LEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEKMAKCKR 426
            E+K+  + G L+   L S+ P     S +   ++  LHEY +L+  ++G  ++M   +R
Sbjct: 518 YESKK-HKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHEYKNLS-TSEGVSKEMHHLQR 575

Query: 427 FLMSYLNEV 435
             +    E+
Sbjct: 576 MFLQNCWEI 584


>gi|112421122 DnaJ (Hsp40) homolog, subfamily C, member 13 [Homo
           sapiens]
          Length = 2243

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 28/170 (16%)

Query: 314 EKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQFAQL-QFLE---- 368
           EK I + + +   +E  V+A  A     + +FQ + R +  +AGF+ F QL +F E    
Sbjct: 401 EKLINNAITALLSQEGDVVASNAEL---ESQFQAVRRLVASKAGFLAFTQLPKFRERLGV 457

Query: 369 --AKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEKMAKCKR 426
              K L RS    +   + +   L+           P+H+  DL Q  Q ++  +   K+
Sbjct: 458 KVVKALKRSNNGIIHAAVDMLCALM----------CPMHDDYDLRQ-EQLNKASLLSSKK 506

Query: 427 FLMSYLNEVRS-------TEVANGYKEDIDTALLKLYAEADHDSLLDLLV 469
           FL + L +  S         V +   + +  AL   Y+E       D+L+
Sbjct: 507 FLENLLEKFNSHVDHGTGALVISSLLDFLTFALCAPYSETTEGQQFDMLL 556


>gi|34915994 transducin-like enhancer protein 4 [Homo sapiens]
          Length = 773

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)

Query: 151 FLVYEDRVQIVKEVSTAEQPLAVAVDGHFLCLALTTQYIIHNYSTGVSQDLFPYCSEERP 210
           FL  E + Q+V+ V  A+Q + +A     +   L  Q++ H +  G+   L P+ S  +P
Sbjct: 101 FLSQEHQQQVVQAVERAKQ-VTMAELNAIIGQQLQAQHLSHGH--GLPVPLTPHPSGLQP 157

Query: 211 PIVKRIGRQEFLLAGPGGLG 230
           P +  IG    LLA    LG
Sbjct: 158 PAIPPIGSSAGLLALSSALG 177


>gi|239750002 PREDICTED: hypothetical protein XP_002347250 [Homo
           sapiens]
          Length = 505

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 562 TKRPLDEQQKNSFNPDDIINCLKKYPKALVKYLEHLVIDKRLQKEEYHTH 611
           T+   D+ QK  F  D  I   K YP+ ++ YLE L     + + EYH H
Sbjct: 324 TRHSGDDSQKWVFGTDGCIYS-KAYPQFVLTYLEELNAQVDVTQTEYHIH 372


>gi|239744313 PREDICTED: hypothetical protein XP_002343115 [Homo
           sapiens]
          Length = 456

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 562 TKRPLDEQQKNSFNPDDIINCLKKYPKALVKYLEHLVIDKRLQKEEYHTH 611
           T+   D+ QK  F  D  I   K YP+ ++ YLE L     + + EYH H
Sbjct: 275 TRHSGDDSQKWVFGTDGCIYS-KAYPQFVLTYLEELNAQVDVTQTEYHIH 323


>gi|239755532 PREDICTED: similar to hCG1990723 [Homo sapiens]
          Length = 225

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 567 DEQQKNSFNPDDIINCLKKYPKALVKYLEHLVIDKRLQKEEYHTH 611
           D+ QK  F  D  I   K YP+ ++ YLE L     + + EYH H
Sbjct: 49  DDSQKWVFGTDGCIYS-KAYPQFVLTYLEELNAQVDVTQTEYHIH 92


>gi|42544121 vacuolar protein sorting 13C protein isoform 1A [Homo
           sapiens]
          Length = 3710

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 13/60 (21%)

Query: 295 GRVIVATSKGVYILV---------PLPLEKQIQDLLASR--RVEEALVLAKGARRNIPKE 343
           G  +VAT +G+Y+LV          +  EK +QD+      R+EEA  L K A ++ PKE
Sbjct: 76  GEAVVATLEGLYLLVVPGASIKYDAVKEEKSLQDVKQKELSRIEEA--LQKAAEKDKPKE 133


>gi|66348091 vacuolar protein sorting 13C protein isoform 1B [Homo
           sapiens]
          Length = 3585

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 13/60 (21%)

Query: 295 GRVIVATSKGVYILV---------PLPLEKQIQDLLASR--RVEEALVLAKGARRNIPKE 343
           G  +VAT +G+Y+LV          +  EK +QD+      R+EEA  L K A ++ PKE
Sbjct: 76  GEAVVATLEGLYLLVVPGASIKYDAVKEEKSLQDVKQKELSRIEEA--LQKAAEKDKPKE 133


>gi|239757786 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 82

 Score = 30.0 bits (66), Expect = 9.6
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 789 GLARSENLIYTYDKMKLKGSSIQLSDKKLCQICQNPFCEPVF 830
           G   S N + T+ K K KGSS ++   K   + + P+  P F
Sbjct: 35  GAGSSSNSVITHGKRKSKGSSKRIPPSKNASLGEGPYLTPSF 76


>gi|70887790 DNA-directed DNA polymerase gamma 2 [Homo sapiens]
          Length = 485

 Score = 30.0 bits (66), Expect = 9.6
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 12/108 (11%)

Query: 375 SGQLDVRELISLYPFLLPTSSSFTRS----------HPPLHEYADLNQLTQGDQEKMAKC 424
           +G LD   L  LY     T +SFTR           HP L        + +G   ++ + 
Sbjct: 339 NGDLDRGMLAYLYDSFQLTENSFTRKKNLHRKVLKLHPCLAPIKVALDVGRGPTLELRQV 398

Query: 425 KRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLL-DLLVTE 471
            + L + L E     V  GY E + ++L +LY++ D  S+L  +LVTE
Sbjct: 399 CQGLFNELLE-NGISVWPGYLETMQSSLEQLYSKYDEMSILFTVLVTE 445


>gi|56549645 nucleoporin 98kD isoform 4 [Homo sapiens]
          Length = 1726

 Score = 30.0 bits (66), Expect = 9.6
 Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 11/126 (8%)

Query: 365  QFLEAKELFRSGQLDVRELISLYP-FLLPTSSSFTRSHPPLHEYADLNQLTQGDQEKMAK 423
            Q  E K++    QLD +  ++++  +LLP ++S +R+   L  Y +  Q T  D ++ A 
Sbjct: 1392 QLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRA---LSMYEEAFQNTS-DSDRYA- 1446

Query: 424  CKRFLMSYLNE----VRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDS 479
            C   L SYL      +   + +     D+   LLKLY+++  +  +  L+T +  LL   
Sbjct: 1447 CSP-LPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDSIREKAVRELLTRHCQLLETP 1505

Query: 480  AAWLEK 485
             +W ++
Sbjct: 1506 ESWAKE 1511


>gi|210147457 intermediate filament family orphan 2 [Homo sapiens]
          Length = 517

 Score = 30.0 bits (66), Expect = 9.6
 Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 4/100 (4%)

Query: 368 EAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEKMAKCKRF 427
           E +  F++   + +E I      L T+ S    H  LHEY ++  + +G   +M  C+R 
Sbjct: 419 ETESFFKTRDKEYQETIGQIELELATAKSDMNRH--LHEYMEMCSMKRGLDVQMETCRRL 476

Query: 428 LMSYL--NEVRSTEVANGYKEDIDTALLKLYAEADHDSLL 465
           +      N    + VA+      D    +   EAD + ++
Sbjct: 477 IKGSADRNSPSPSSVASSDSGSTDEIQDEFEREADVEPMV 516


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,400,490
Number of Sequences: 37866
Number of extensions: 1439044
Number of successful extensions: 3217
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3195
Number of HSP's gapped (non-prelim): 28
length of query: 860
length of database: 18,247,518
effective HSP length: 111
effective length of query: 749
effective length of database: 14,044,392
effective search space: 10519249608
effective search space used: 10519249608
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.