Guide to the Human Genome
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Name: DNAJC13 Sequence: fasta or formatted (2243aa) NCBI GI: 112421122
Description:

DnaJ (Hsp40) homolog, subfamily C, member 13

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5        169           2
 C cysteine            1.8         40           1
 D aspartate           4.5        101           2
 E glutamate           7.9        177           2
 F phenylalanine       4.5        100           3
 G glycine             5.0        113           2
 H histidine           2.5         57           2
 I isoleucine          5.6        126           2
 K lysine              6.3        142           2
 L leucine            11.9        268           3
 M methionine          2.8         62           2
 N asparagine          4.7        105           2
 P proline             4.3         97           3
 Q glutamine           4.0         90           2
 R arginine            5.1        115           2
 S serine              6.3        142           2
 T threonine           5.1        115           2
 V valine              5.7        127           2
 W tryptophan          1.1         25           1
 Y tyrosine            3.2         72           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ (Hsp40) homolog, subfamily C, member 13 
DNAJB5                0.007   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.007   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJA2                0.007   DnaJ subfamily A member 2 
DNAJA4                0.006   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB7                0.006   DnaJ (Hsp40) homolog, subfamily B, member 7 
DNAJB6                0.006   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.006   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
DNAJB5                0.005   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJA3                0.005   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA3                0.005   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA4                0.005   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB3                0.005   DnaJ (Hsp40) homolog, subfamily B, member 3 
DNAJB8                0.005   DnaJ homolog, subfamily B, member 8 
DNAJA1                0.005   DnaJ (Hsp40) homolog, subfamily A, member 1 
DNAJB2                0.005   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.005   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB9                0.004   DnaJ (Hsp40) homolog, subfamily B, member 9 
DNAJB14               0.004   DnaJ (Hsp40) homolog, subfamily B, member 14 isoform...
DNAJC5                0.004   DnaJ (Hsp40) homolog, subfamily C, member 5 
DNAJC16               0.004   DnaJ (Hsp40) homolog, subfamily C, member 16 
DNAJB12               0.004   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.004   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB4                0.004   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJC5B               0.004   DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho...
DNAJB1                0.004   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJB11               0.004   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...
SYMPK                 0.003   symplekin 
SEC63                 0.003   SEC63-like protein 
DNAJC10               0.003   DnaJ (Hsp40) homolog, subfamily C, member 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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