Guide to the Human Genome
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Name: POLG2 Sequence: fasta or formatted (485aa) NCBI GI: 70887790
Description:

DNA-directed DNA polymerase gamma 2

Referenced in:

DNA Polymerases
Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         20           2
 C cysteine            2.3         11           1
 D aspartate           3.9         19           1
 E glutamate           7.4         36           2
 F phenylalanine       3.9         19           1
 G glycine             8.0         39           2
 H histidine           3.9         19           2
 I isoleucine          2.7         13           1
 K lysine              6.4         31           2
 L leucine            14.0         68           2
 M methionine          1.9          9           2
 N asparagine          4.3         21           1
 P proline             4.5         22           2
 Q glutamine           3.5         17           2
 R arginine            6.2         30           2
 S serine              7.8         38           3
 T threonine           3.9         19           2
 V valine              6.8         33           3
 W tryptophan          2.1         10           2
 Y tyrosine            2.3         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DNA-directed DNA polymerase gamma 2 
HR                    0.007   hairless protein isoform a 
HR                    0.007   hairless protein isoform b 
UBA3                  0.006   ubiquitin-activating enzyme 3 isoform 1 
BPTF                  0.005   bromodomain PHD finger transcription factor isoform ...
OTOA                  0.005   otoancorin isoform 3 
OTOA                  0.005   otoancorin isoform 2 
OTOA                  0.005   otoancorin isoform 1 
TGFBRAP1              0.005   transforming growth factor, beta receptor associate...
TGFBRAP1              0.005   transforming growth factor, beta receptor associated...
RAD54L2               0.005   RAD54-like 2 
MYO5B                 0.004   myosin VB 
S1PR3                 0.004   sphingosine-1-phosphate receptor 3 
F8A1                  0.004   coagulation factor VIII-associated protein 
F8A3                  0.004   coagulation factor VIII-associated (intronic transcr...
F8A2                  0.004   coagulation factor VIII-associated (intronic transcr...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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