BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|217272880 sphingosine kinase 1 isoform 2 [Homo sapiens] (470 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|217272880 sphingosine kinase 1 isoform 2 [Homo sapiens] 957 0.0 gi|217272885 sphingosine kinase 1 isoform 3 [Homo sapiens] 781 0.0 gi|217272883 sphingosine kinase 1 isoform 3 [Homo sapiens] 781 0.0 gi|21361088 sphingosine kinase 1 isoform 1 [Homo sapiens] 774 0.0 gi|21361699 sphingosine kinase 2 [Homo sapiens] 253 3e-67 gi|20336726 ceramide kinase [Homo sapiens] 94 3e-19 gi|8922701 acylglycerol kinase [Homo sapiens] 83 5e-16 gi|41680688 ceramide kinase-like isoform a [Homo sapiens] 68 2e-11 gi|71896723 ceramide kinase-like isoform b [Homo sapiens] 54 3e-07 gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 39 0.013 gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 39 0.013 gi|12707580 paired-like homeobox 2b [Homo sapiens] 37 0.039 gi|4758156 diacylglycerol kinase, iota [Homo sapiens] 37 0.050 gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 36 0.066 gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 36 0.086 gi|239753399 PREDICTED: hypothetical protein [Homo sapiens] 35 0.11 gi|239741865 PREDICTED: hypothetical protein XP_002342328 [Homo ... 35 0.11 gi|239756441 PREDICTED: hypothetical protein LOC388199 [Homo sap... 35 0.15 gi|48762934 alpha 2 type I collagen [Homo sapiens] 35 0.19 gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 35 0.19 gi|23238226 CDC42 effector protein 1 [Homo sapiens] 35 0.19 gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 35 0.19 gi|32479521 dishevelled 1 [Homo sapiens] 34 0.25 gi|169209545 PREDICTED: hypothetical protein [Homo sapiens] 34 0.25 gi|239753114 PREDICTED: hypothetical protein [Homo sapiens] 34 0.25 gi|169210556 PREDICTED: hypothetical protein [Homo sapiens] 34 0.25 gi|169210041 PREDICTED: hypothetical protein [Homo sapiens] 34 0.25 gi|222537714 taxilin beta [Homo sapiens] 34 0.33 gi|78499633 phospholipase C, eta 2 [Homo sapiens] 34 0.33 gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo ... 34 0.33 >gi|217272880 sphingosine kinase 1 isoform 2 [Homo sapiens] Length = 470 Score = 957 bits (2473), Expect = 0.0 Identities = 470/470 (100%), Positives = 470/470 (100%) Query: 1 MSAQVLGFLRSWTPLPLAAPRGPAAAGNDAGAPAATAPGGEGEPHSRPCDARLGSTDKEL 60 MSAQVLGFLRSWTPLPLAAPRGPAAAGNDAGAPAATAPGGEGEPHSRPCDARLGSTDKEL Sbjct: 1 MSAQVLGFLRSWTPLPLAAPRGPAAAGNDAGAPAATAPGGEGEPHSRPCDARLGSTDKEL 60 Query: 61 KAGAAATGSAPTAPGTPWQREPRVEVMDPAGGPRGVLPRPCRVLVLLNPRGGKGKALQLF 120 KAGAAATGSAPTAPGTPWQREPRVEVMDPAGGPRGVLPRPCRVLVLLNPRGGKGKALQLF Sbjct: 61 KAGAAATGSAPTAPGTPWQREPRVEVMDPAGGPRGVLPRPCRVLVLLNPRGGKGKALQLF 120 Query: 121 RSHVQPLLAEAEISFTLMLTERRNHARELVRSEELGRWDALVVMSGDGLMHEVVNGLMER 180 RSHVQPLLAEAEISFTLMLTERRNHARELVRSEELGRWDALVVMSGDGLMHEVVNGLMER Sbjct: 121 RSHVQPLLAEAEISFTLMLTERRNHARELVRSEELGRWDALVVMSGDGLMHEVVNGLMER 180 Query: 181 PDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLS 240 PDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLS Sbjct: 181 PDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLS 240 Query: 241 LHTASGLRLFSVLSLAWGFIADVDLESEKYRRLGEMRFTLGTFLRLAALRTYRGRLAYLP 300 LHTASGLRLFSVLSLAWGFIADVDLESEKYRRLGEMRFTLGTFLRLAALRTYRGRLAYLP Sbjct: 241 LHTASGLRLFSVLSLAWGFIADVDLESEKYRRLGEMRFTLGTFLRLAALRTYRGRLAYLP 300 Query: 301 VGRVGSKTPASPVVVQQGPVDAHLVPLEEPVPSHWTVVPDEDFVLVLALLHSHLGSEMFA 360 VGRVGSKTPASPVVVQQGPVDAHLVPLEEPVPSHWTVVPDEDFVLVLALLHSHLGSEMFA Sbjct: 301 VGRVGSKTPASPVVVQQGPVDAHLVPLEEPVPSHWTVVPDEDFVLVLALLHSHLGSEMFA 360 Query: 361 APMGRCAAGVMHLFYVRAGVSRAMLLRLFLAMEKGRHMEYECPYLVYVPVVAFRLEPKDG 420 APMGRCAAGVMHLFYVRAGVSRAMLLRLFLAMEKGRHMEYECPYLVYVPVVAFRLEPKDG Sbjct: 361 APMGRCAAGVMHLFYVRAGVSRAMLLRLFLAMEKGRHMEYECPYLVYVPVVAFRLEPKDG 420 Query: 421 KGVFAVDGELMVSEAVQGQVHPNYFWMVSGCVEPPPSWKPQQMPPPEEPL 470 KGVFAVDGELMVSEAVQGQVHPNYFWMVSGCVEPPPSWKPQQMPPPEEPL Sbjct: 421 KGVFAVDGELMVSEAVQGQVHPNYFWMVSGCVEPPPSWKPQQMPPPEEPL 470 >gi|217272885 sphingosine kinase 1 isoform 3 [Homo sapiens] Length = 384 Score = 781 bits (2016), Expect = 0.0 Identities = 384/384 (100%), Positives = 384/384 (100%) Query: 87 MDPAGGPRGVLPRPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHA 146 MDPAGGPRGVLPRPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHA Sbjct: 1 MDPAGGPRGVLPRPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHA 60 Query: 147 RELVRSEELGRWDALVVMSGDGLMHEVVNGLMERPDWETAIQKPLCSLPAGSGNALAASL 206 RELVRSEELGRWDALVVMSGDGLMHEVVNGLMERPDWETAIQKPLCSLPAGSGNALAASL Sbjct: 61 RELVRSEELGRWDALVVMSGDGLMHEVVNGLMERPDWETAIQKPLCSLPAGSGNALAASL 120 Query: 207 NHYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLE 266 NHYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLE Sbjct: 121 NHYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLE 180 Query: 267 SEKYRRLGEMRFTLGTFLRLAALRTYRGRLAYLPVGRVGSKTPASPVVVQQGPVDAHLVP 326 SEKYRRLGEMRFTLGTFLRLAALRTYRGRLAYLPVGRVGSKTPASPVVVQQGPVDAHLVP Sbjct: 181 SEKYRRLGEMRFTLGTFLRLAALRTYRGRLAYLPVGRVGSKTPASPVVVQQGPVDAHLVP 240 Query: 327 LEEPVPSHWTVVPDEDFVLVLALLHSHLGSEMFAAPMGRCAAGVMHLFYVRAGVSRAMLL 386 LEEPVPSHWTVVPDEDFVLVLALLHSHLGSEMFAAPMGRCAAGVMHLFYVRAGVSRAMLL Sbjct: 241 LEEPVPSHWTVVPDEDFVLVLALLHSHLGSEMFAAPMGRCAAGVMHLFYVRAGVSRAMLL 300 Query: 387 RLFLAMEKGRHMEYECPYLVYVPVVAFRLEPKDGKGVFAVDGELMVSEAVQGQVHPNYFW 446 RLFLAMEKGRHMEYECPYLVYVPVVAFRLEPKDGKGVFAVDGELMVSEAVQGQVHPNYFW Sbjct: 301 RLFLAMEKGRHMEYECPYLVYVPVVAFRLEPKDGKGVFAVDGELMVSEAVQGQVHPNYFW 360 Query: 447 MVSGCVEPPPSWKPQQMPPPEEPL 470 MVSGCVEPPPSWKPQQMPPPEEPL Sbjct: 361 MVSGCVEPPPSWKPQQMPPPEEPL 384 >gi|217272883 sphingosine kinase 1 isoform 3 [Homo sapiens] Length = 384 Score = 781 bits (2016), Expect = 0.0 Identities = 384/384 (100%), Positives = 384/384 (100%) Query: 87 MDPAGGPRGVLPRPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHA 146 MDPAGGPRGVLPRPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHA Sbjct: 1 MDPAGGPRGVLPRPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHA 60 Query: 147 RELVRSEELGRWDALVVMSGDGLMHEVVNGLMERPDWETAIQKPLCSLPAGSGNALAASL 206 RELVRSEELGRWDALVVMSGDGLMHEVVNGLMERPDWETAIQKPLCSLPAGSGNALAASL Sbjct: 61 RELVRSEELGRWDALVVMSGDGLMHEVVNGLMERPDWETAIQKPLCSLPAGSGNALAASL 120 Query: 207 NHYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLE 266 NHYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLE Sbjct: 121 NHYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLE 180 Query: 267 SEKYRRLGEMRFTLGTFLRLAALRTYRGRLAYLPVGRVGSKTPASPVVVQQGPVDAHLVP 326 SEKYRRLGEMRFTLGTFLRLAALRTYRGRLAYLPVGRVGSKTPASPVVVQQGPVDAHLVP Sbjct: 181 SEKYRRLGEMRFTLGTFLRLAALRTYRGRLAYLPVGRVGSKTPASPVVVQQGPVDAHLVP 240 Query: 327 LEEPVPSHWTVVPDEDFVLVLALLHSHLGSEMFAAPMGRCAAGVMHLFYVRAGVSRAMLL 386 LEEPVPSHWTVVPDEDFVLVLALLHSHLGSEMFAAPMGRCAAGVMHLFYVRAGVSRAMLL Sbjct: 241 LEEPVPSHWTVVPDEDFVLVLALLHSHLGSEMFAAPMGRCAAGVMHLFYVRAGVSRAMLL 300 Query: 387 RLFLAMEKGRHMEYECPYLVYVPVVAFRLEPKDGKGVFAVDGELMVSEAVQGQVHPNYFW 446 RLFLAMEKGRHMEYECPYLVYVPVVAFRLEPKDGKGVFAVDGELMVSEAVQGQVHPNYFW Sbjct: 301 RLFLAMEKGRHMEYECPYLVYVPVVAFRLEPKDGKGVFAVDGELMVSEAVQGQVHPNYFW 360 Query: 447 MVSGCVEPPPSWKPQQMPPPEEPL 470 MVSGCVEPPPSWKPQQMPPPEEPL Sbjct: 361 MVSGCVEPPPSWKPQQMPPPEEPL 384 >gi|21361088 sphingosine kinase 1 isoform 1 [Homo sapiens] Length = 398 Score = 774 bits (1998), Expect = 0.0 Identities = 381/381 (100%), Positives = 381/381 (100%) Query: 90 AGGPRGVLPRPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHAREL 149 AGGPRGVLPRPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHAREL Sbjct: 18 AGGPRGVLPRPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHAREL 77 Query: 150 VRSEELGRWDALVVMSGDGLMHEVVNGLMERPDWETAIQKPLCSLPAGSGNALAASLNHY 209 VRSEELGRWDALVVMSGDGLMHEVVNGLMERPDWETAIQKPLCSLPAGSGNALAASLNHY Sbjct: 78 VRSEELGRWDALVVMSGDGLMHEVVNGLMERPDWETAIQKPLCSLPAGSGNALAASLNHY 137 Query: 210 AGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLESEK 269 AGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLESEK Sbjct: 138 AGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLESEK 197 Query: 270 YRRLGEMRFTLGTFLRLAALRTYRGRLAYLPVGRVGSKTPASPVVVQQGPVDAHLVPLEE 329 YRRLGEMRFTLGTFLRLAALRTYRGRLAYLPVGRVGSKTPASPVVVQQGPVDAHLVPLEE Sbjct: 198 YRRLGEMRFTLGTFLRLAALRTYRGRLAYLPVGRVGSKTPASPVVVQQGPVDAHLVPLEE 257 Query: 330 PVPSHWTVVPDEDFVLVLALLHSHLGSEMFAAPMGRCAAGVMHLFYVRAGVSRAMLLRLF 389 PVPSHWTVVPDEDFVLVLALLHSHLGSEMFAAPMGRCAAGVMHLFYVRAGVSRAMLLRLF Sbjct: 258 PVPSHWTVVPDEDFVLVLALLHSHLGSEMFAAPMGRCAAGVMHLFYVRAGVSRAMLLRLF 317 Query: 390 LAMEKGRHMEYECPYLVYVPVVAFRLEPKDGKGVFAVDGELMVSEAVQGQVHPNYFWMVS 449 LAMEKGRHMEYECPYLVYVPVVAFRLEPKDGKGVFAVDGELMVSEAVQGQVHPNYFWMVS Sbjct: 318 LAMEKGRHMEYECPYLVYVPVVAFRLEPKDGKGVFAVDGELMVSEAVQGQVHPNYFWMVS 377 Query: 450 GCVEPPPSWKPQQMPPPEEPL 470 GCVEPPPSWKPQQMPPPEEPL Sbjct: 378 GCVEPPPSWKPQQMPPPEEPL 398 >gi|21361699 sphingosine kinase 2 [Homo sapiens] Length = 654 Score = 253 bits (646), Expect = 3e-67 Identities = 127/238 (53%), Positives = 169/238 (71%), Gaps = 5/238 (2%) Query: 96 VLPRPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHARELVRSEEL 155 +LPRP R+L+L+NP GG+G A Q ++HV P+++EA +SF L+ TER+NHARELV+ L Sbjct: 176 LLPRPPRLLLLVNPFGGRGLAWQWCKNHVLPMISEAGLSFNLIQTERQNHARELVQGLSL 235 Query: 156 GRWDALVVMSGDGLMHEVVNGLMERPDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQV 215 WD +V +SGDGL+HEV+NGL++RPDWE A++ P+ LP GSGNALA ++N + G+E Sbjct: 236 SEWDGIVTVSGDGLLHEVLNGLLDRPDWEEAVKMPVGILPCGSGNALAGAVNQHGGFEPA 295 Query: 216 TNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLESEKYRRLGE 275 DLL NC+LLLCR P++LLS+ ASG R FS LS+AWGF++DVD++SE++R LG Sbjct: 296 LGLDLLLNCSLLLCRGGGHPLDLLSVTLASGSRCFSFLSVAWGFVSDVDIQSERFRALGS 355 Query: 276 MRFTLGTFLRLAALRTYRGRLAYLPVGRVGSKTPASPVVVQQGP-VDAHLVPLEEPVP 332 RFTLGT L LA L TYRGRL+YLP + PASP P + L +P P Sbjct: 356 ARFTLGTVLGLATLHTYRGRLSYLP----ATVEPASPTPAHSLPRAKSELTLTPDPAP 409 Score = 123 bits (308), Expect = 4e-28 Identities = 69/151 (45%), Positives = 91/151 (60%), Gaps = 9/151 (5%) Query: 300 PVGRVGSKTPASPVVVQQGPVDAHLVPLEEPVPSHWTVVPDEDFVLVLALLHSHLGSEMF 359 P RVG+ T GP D L PL P+P W + + DFVL+LA+ SHLG+++ Sbjct: 504 PDARVGASTC--------GPPDHLLPPLGTPLPPDWVTL-EGDFVLMLAISPSHLGADLV 554 Query: 360 AAPMGRCAAGVMHLFYVRAGVSRAMLLRLFLAMEKGRHMEYECPYLVYVPVVAFRLEPKD 419 AAP R G++HL +VR+G+SRA LLRLFLAME+G H CP L Y AFRLEP Sbjct: 555 AAPHARFDDGLVHLCWVRSGISRAALLRLFLAMERGSHFSLGCPQLGYAAARAFRLEPLT 614 Query: 420 GKGVFAVDGELMVSEAVQGQVHPNYFWMVSG 450 +GV VDGE + +Q Q+HP +++G Sbjct: 615 PRGVLTVDGEQVEYGPLQAQMHPGIGTLLTG 645 >gi|20336726 ceramide kinase [Homo sapiens] Length = 537 Score = 93.6 bits (231), Expect = 3e-19 Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 22/227 (9%) Query: 99 RPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHARELVRSEELGRW 158 RP +LV +NP GGKG+ +++ V PL A I+ +++TE N A+E + + ++ Sbjct: 129 RPKHLLVFINPFGGKGQGKRIYERKVAPLFTLASITTDIIVTEHANQAKETLYEINIDKY 188 Query: 159 DALVVMSGDGLMHEVVNGLMERPDWETAIQK------------PLCSLPAGSGNALAASL 206 D +V + GDG+ EV++GL+ R + + + +PAGS + + Sbjct: 189 DGIVCVGGDGMFSEVLHGLIGRTQRSAGVDQNHPRAVLVPSSLRIGIIPAGSTDCVC--- 245 Query: 207 NHYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLE 266 Y V D T+ ++ L+ M++ S+H S L +SV L +GF D+ + Sbjct: 246 -----YSTVGTSDAETSALHIVVGDSLA-MDVSSVHHNSTLLRYSVSLLGYGFYGDIIKD 299 Query: 267 SEKYRRLGEMRFTLGTFLRLAALRTYRGRLAYLPVGR-VGSKTPASP 312 SEK R LG R+ + Y G +++LP VGS P Sbjct: 300 SEKKRWLGLARYDFSGLKTFLSHHCYEGTVSFLPAQHTVGSPRDRKP 346 >gi|8922701 acylglycerol kinase [Homo sapiens] Length = 422 Score = 83.2 bits (204), Expect = 5e-16 Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 9/215 (4%) Query: 102 RVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHARELVRSEELGRWDAL 161 + V LNP KGKA LF + P+L + + T++ T+ A++L+ E + D + Sbjct: 62 KATVFLNPAACKGKARTLFEKNAAPILHLSGMDVTIVKTDYEGQAKKLL--ELMENTDVI 119 Query: 162 VVMSGDGLMHEVVNGLMERPDWETAIQKPLCSLPAGSGNALAASLNHYAGYEQVTNEDLL 221 +V GDG + EVV G++ R D T + P+ +P G +SL+H E + Sbjct: 120 IVAGGDGTLQEVVTGVLRRTDEATFSKIPIGFIPLGE----TSSLSHTLFAESGNKVQHI 175 Query: 222 TNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLESEKYRRLGEMRFTLG 281 T+ TL + + P+++L + +F++ L WG D ++ KY LG ++ Sbjct: 176 TDATLAIVKGETVPLDVLQIKGEKEQPVFAMTGLRWGSFRDAGVKVSKYWYLGPLKIKAA 235 Query: 282 TFLRLAA--LRTYRGRLAYL-PVGRVGSKTPASPV 313 F +T++ ++Y P R ++ +PV Sbjct: 236 HFFSTLKEWPQTHQASISYTGPTERPPNEPEETPV 270 >gi|41680688 ceramide kinase-like isoform a [Homo sapiens] Length = 532 Score = 67.8 bits (164), Expect = 2e-11 Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 22/214 (10%) Query: 99 RPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHARELVRSEELGRW 158 RP + +LLNP+ K +A Q++ V+PLL A I + + E HA L++ EL + Sbjct: 165 RPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGF 224 Query: 159 DALVVMSGDGLMHEVVNGLMERPDWETAI-----------QKPLCSLPAGSGNALAASLN 207 D +V + GDG EV + L+ R + Q PL +PAGS N LA SL+ Sbjct: 225 DGVVCVGGDGSASEVAHALLLRAQKNAGMETDRILTPVRAQLPLGLIPAGSTNVLAHSLH 284 Query: 208 HYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSLHTASGLRLFSVLSLAWGFIADVDLES 267 G V TL + + +++ + TA L F S +GF + Sbjct: 285 ---GVPHV------ITATLHIIMGHVQLVDVCTFSTAGKLLRFG-FSAMFGFGGRTLALA 334 Query: 268 EKYRRLG-EMRFTLGTFLRLAALRTYRGRLAYLP 300 EKYR + R LA L+ +++LP Sbjct: 335 EKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLP 368 >gi|71896723 ceramide kinase-like isoform b [Homo sapiens] Length = 558 Score = 53.9 bits (128), Expect = 3e-07 Identities = 63/240 (26%), Positives = 96/240 (40%), Gaps = 48/240 (20%) Query: 99 RPCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHARELVRSEELGRW 158 RP + +LLNP+ K +A Q++ V+PLL A I + + E HA L++ EL + Sbjct: 165 RPKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSLLKECELQGF 224 Query: 159 D--------------------------ALVVMSGDGLMHEVVNGLMERPDWETAI----- 187 D ++V + GDG EV + L+ R + Sbjct: 225 DGGHRKPLFAIHWSVQRLFTGMQTLEPSVVCVGGDGSASEVAHALLLRAQKNAGMETDRI 284 Query: 188 ------QKPLCSLPAGSGNALAASLNHYAGYEQVTNEDLLTNCTLLLCRRLLSPMNLLSL 241 Q PL +PAGS N LA SL+ G V TL + + +++ + Sbjct: 285 LTPVRAQLPLGLIPAGSTNVLAHSLH---GVPHV------ITATLHIIMGHVQLVDVCTF 335 Query: 242 HTASGLRLFSVLSLAWGFIADVDLESEKYRRLG-EMRFTLGTFLRLAALRTYRGRLAYLP 300 TA L F S +GF +EKYR + R LA L+ +++LP Sbjct: 336 STAGKLLRFG-FSAMFGFGGRTLALAEKYRWMSPNQRRDFAVVKALAKLKAEDCEISFLP 394 >gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] Length = 1489 Score = 38.5 bits (88), Expect = 0.013 Identities = 34/94 (36%), Positives = 38/94 (40%), Gaps = 7/94 (7%) Query: 13 TPLPLAAPRGPAAAGNDAGAPAATAPGGEGEPHSRPCDARLGSTDKELKAGAAATGSAPT 72 TP P PR P G DAGA A GG G P D D+E AAA G+A Sbjct: 1270 TPFPGPGPRRPPWEGADAGAAGGEA-GGAGAPGPAEEDGEDEDEDEEEDEEAAAPGAAAG 1328 Query: 73 APGTPWQREPRVEVM------DPAGGPRGVLPRP 100 G R V V+ D A RG+L P Sbjct: 1329 PRGPGRARAAPVPVVVSSADADAARPLRGLLKSP 1362 Score = 34.3 bits (77), Expect = 0.25 Identities = 32/94 (34%), Positives = 36/94 (38%), Gaps = 9/94 (9%) Query: 14 PLPLAAPRGPAAAGNDAGAPAATAPGGEG--EPHSRPCDARLGSTDKELKAGAAATGSAP 71 P P PR PA P+A A G G P +P D+ + GA G A Sbjct: 783 PPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPGDSGYETETPFSPEGAFPGGGAA 842 Query: 72 TAPGTPWQREPRVEVMDPAGGPR-----GVLPRP 100 G P R P E DP G PR G LP P Sbjct: 843 EEEGVPRPRAP-PEPPDP-GAPRPPPDPGPLPLP 874 Score = 33.9 bits (76), Expect = 0.33 Identities = 28/92 (30%), Positives = 34/92 (36%), Gaps = 9/92 (9%) Query: 11 SWTPLPLAAPRGPAAAGNDAGAPAATAP---GGEGEPHSRPCDARLGSTDKELKAGAAAT 67 SW P P P + A AP+A GGE P + G+ + + A T Sbjct: 1065 SWGPAPTIGEPAPETSLERAPAPSAVVSSRNGGETAPGPLGPAPKNGTLEPGTERRAPET 1124 Query: 68 GSAPTAPGT------PWQREPRVEVMDPAGGP 93 G AP APG R P P GGP Sbjct: 1125 GGAPRAPGAGRLDLGSGGRAPVGTGTAPGGGP 1156 >gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] Length = 538 Score = 38.5 bits (88), Expect = 0.013 Identities = 32/97 (32%), Positives = 36/97 (37%), Gaps = 8/97 (8%) Query: 14 PLPLAAPRGPAAAGNDAGAPAATAPGGEGEPHSRPCDARLGSTDKELKAGAAATGSAPTA 73 P P APRG AA A P AP P + AR AAA +AP + Sbjct: 109 PAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPAR-------APRAAAAAATAPPS 161 Query: 74 PGTPWQREPRVEVMDPAGGPRGVLPRPCRVLVLLNPR 110 PG P Q PR + P P P V PR Sbjct: 162 PG-PAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPR 197 >gi|12707580 paired-like homeobox 2b [Homo sapiens] Length = 314 Score = 37.0 bits (84), Expect = 0.039 Identities = 29/87 (33%), Positives = 32/87 (36%), Gaps = 7/87 (8%) Query: 14 PLPLAAPRGPAAAG-NDAGAPAATAPGGE-GEPHSRPCDARLGSTDKELKAGAAATGSAP 71 P P G G + AGAP A PGG GEP A + A AAA Sbjct: 204 PTPSCGANGGGGGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGGL 263 Query: 72 TAPGTPWQ-----REPRVEVMDPAGGP 93 A G P Q P + D GGP Sbjct: 264 AAAGGPGQGWAPGPGPITSIPDSLGGP 290 >gi|4758156 diacylglycerol kinase, iota [Homo sapiens] Length = 1065 Score = 36.6 bits (83), Expect = 0.050 Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 20/141 (14%) Query: 75 GTPWQREPRVEVMDPAGGPRGVLPRPCRVLVLLNPRGGKG---KALQLFRSHVQPLLAEA 131 G + + R V+ P P L +P +LV +NP+ G K LQ+F ++ P Sbjct: 354 GMEQENKGRPFVIKPISSP---LMKP--LLVFVNPKSGGNQGTKVLQMFMWYLNPRQV-- 406 Query: 132 EISFTLMLTERRNHARELVRSEELGRWDALVVMSGDGLMHEVVNGLMERPDWETAIQKPL 191 F L E A EL R R ++ GDG + +++ L E + + Q P+ Sbjct: 407 ---FDLS-QEGPKDALELYRKVPNLR---ILACGGDGTVGWILSILDEL---QLSPQPPV 456 Query: 192 CSLPAGSGNALAASLNHYAGY 212 LP G+GN LA +LN GY Sbjct: 457 GVLPLGTGNDLARTLNWGGGY 477 Score = 30.0 bits (66), Expect = 4.7 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 8/56 (14%) Query: 15 LPLAAPRGPAAAGNDAGAPAATAPGGEGEPHSRPCDARLGSTDKELKAGAAATGSA 70 LPL A RGPA A A A AA+ PG PC + AGA S+ Sbjct: 11 LPLPAARGPARAPAAAAAAAASPPG--------PCSGAACAPSAAAGAGAMNPSSS 58 >gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] Length = 1192 Score = 36.2 bits (82), Expect = 0.066 Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 13/100 (13%) Query: 18 AAPRGPAAAGNDAGAPAATAPGGEGEPHSRPC--DARLGSTDKELKAGAAATGSAPTAPG 75 A P GP +G + P PGG RP G + E +AG GS+ PG Sbjct: 116 AVPPGPPLSGGLSPDPK---PGGAPTSSRRPLLSSPSWGGPEPEGRAGGGIPGSSSPHPG 172 Query: 76 TPWQREPRVEVMDPAGGPRGVLPRPCRVLVLLNPRGGKGK 115 T R +V PA P+PC+ + + G GK Sbjct: 173 T-GSRRLKVAPPPPA-------PKPCKTVTTSGAKAGGGK 204 >gi|4885407 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 [Homo sapiens] Length = 1203 Score = 35.8 bits (81), Expect = 0.086 Identities = 36/114 (31%), Positives = 41/114 (35%), Gaps = 21/114 (18%) Query: 4 QVLGFLRSWTPLPLAAPRGPAAAGNDAGAPAATAPGGEG----------------EPHSR 47 + LG S + PL P P A A P+ PG G P S Sbjct: 912 KALGGSLSSSDSPLLTPLQPGARSPQAAQPSPAPPGARGGLGLPEHFLPPPPSSRSPSSS 971 Query: 48 PCDARLGSTDKELKAGAAATGSAPTAPGTPWQREPRVEVMDPAGG--PRGVLPR 99 P +LG EL G ATG T P Q EP V +GG P G PR Sbjct: 972 P--GQLGQPPGELSLG-LATGPLSTPETPPRQPEPPSLVAGASGGASPVGFTPR 1022 >gi|239753399 PREDICTED: hypothetical protein [Homo sapiens] Length = 165 Score = 35.4 bits (80), Expect = 0.11 Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 14/96 (14%) Query: 8 FLRSWTPLPLAAPRGPAAAGNDAGAPAA-------TAPG---GEGEPHSRPCDARLGSTD 57 FL+ AAPR P A A AA TAP G G+ D G + Sbjct: 67 FLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADGLRGRSP 126 Query: 58 KELKAGAAATGSAPTAPGTPWQREPRVEVMDPAGGP 93 + AG A S P+APG+P ++ + A GP Sbjct: 127 RRRPAGRAHARSLPSAPGSP----KKIPTLARAAGP 158 >gi|239741865 PREDICTED: hypothetical protein XP_002342328 [Homo sapiens] Length = 165 Score = 35.4 bits (80), Expect = 0.11 Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 14/96 (14%) Query: 8 FLRSWTPLPLAAPRGPAAAGNDAGAPAA-------TAPG---GEGEPHSRPCDARLGSTD 57 FL+ AAPR P A A AA TAP G G+ D G + Sbjct: 67 FLKVAEGAAAAAPRKPRTGRGGAAATAAVTRKERETAPARDRGGGDGGGARADGLRGRSP 126 Query: 58 KELKAGAAATGSAPTAPGTPWQREPRVEVMDPAGGP 93 + AG A S P+APG+P ++ + A GP Sbjct: 127 RRRPAGRAHARSLPSAPGSP----KKIPTLARAAGP 158 >gi|239756441 PREDICTED: hypothetical protein LOC388199 [Homo sapiens] Length = 373 Score = 35.0 bits (79), Expect = 0.15 Identities = 33/117 (28%), Positives = 38/117 (32%), Gaps = 26/117 (22%) Query: 10 RSWTPLPLAAPRGPAAAGNDAGAPAATAPGGEGEPHSRP--------CDARLGSTDKELK 61 R P+P + P P GAP + GG SRP DA LG+ L Sbjct: 239 RHGLPIPGSTPT-PMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLW 297 Query: 62 AGAAATGSAPTAPGTP-----------------WQREPRVEVMDPAGGPRGVLPRPC 101 G + G A PG W EP DPA G PR C Sbjct: 298 TGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATGAARFGPRSC 354 >gi|48762934 alpha 2 type I collagen [Homo sapiens] Length = 1366 Score = 34.7 bits (78), Expect = 0.19 Identities = 29/90 (32%), Positives = 35/90 (38%), Gaps = 9/90 (10%) Query: 14 PLPLAAPRGPAAAGNDAGAPAATAPGGEGEPHSRPCD-ARLGSTDKELKAGAAATGSAPT 72 P + AP GPA A D G A P G P P + +G AG A P Sbjct: 678 PGAVGAP-GPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPG 736 Query: 73 APGTPWQREPRVE--VMDPAG-----GPRG 95 A G + P+ E V+ P G GP G Sbjct: 737 AKGERGAKGPKGENGVVGPTGPVGAAGPAG 766 Score = 34.3 bits (77), Expect = 0.25 Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 5/80 (6%) Query: 18 AAPRGPAAAGNDAGAPAATAPGGEGEPHSRPCDARLGSTDKELKAGAAATGSAPTAPGTP 77 A P GP+ + GA A PGG+GE +G+ ++ GA AP G Sbjct: 633 AGPSGPSGLPGERGA--AGIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGAT 690 Query: 78 WQREPRVEVMDPAG--GPRG 95 R PAG GPRG Sbjct: 691 GDR-GEAGAAGPAGPAGPRG 709 Score = 32.7 bits (73), Expect = 0.73 Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 6/69 (8%) Query: 14 PLPLAAPRGPAAAGNDAGAPAATAPGGE-GEP-HSRPCDARLGSTDKELKAGAAATGSAP 71 P+ L PRGP A G P GE GEP + P AR G KAG P Sbjct: 92 PMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGAR-GPAGPPGKAG---EDGHP 147 Query: 72 TAPGTPWQR 80 PG P +R Sbjct: 148 GKPGRPGER 156 Score = 32.0 bits (71), Expect = 1.2 Identities = 30/100 (30%), Positives = 37/100 (37%), Gaps = 16/100 (16%) Query: 18 AAPRGPAAAGNDAGAPAATAPGGEGEPHSRPCDARLGSTDKELKAGAAATGSAPTAPGTP 77 A P GPA + G P + P G P P G+ GAA APG P Sbjct: 273 AGPAGPAGPRGEVGLPGLSGPVG---PPGNP-----GANGLTGAKGAAGLPGVAGAPGLP 324 Query: 78 WQRE-PRVEVMDPAGGPRGVLPRPCRVLVLLNPRGGKGKA 116 R P A G RG++ P P G KG++ Sbjct: 325 GPRGIPGPVGAAGATGARGLVGEP-------GPAGSKGES 357 >gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] Length = 1073 Score = 34.7 bits (78), Expect = 0.19 Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 12/80 (15%) Query: 22 GPAAAGNDAGAPAATAPGG---EGEPHSRPCDARLGSTDKELKAGAAATGSAPTAPGTPW 78 GP D GAP P G +GEP R GS G AP PG+P Sbjct: 446 GPVGPRGDPGAPGLPGPPGKGKDGEPGLR------GSPGLPGPLGTKGDRGAPGIPGSPG 499 Query: 79 QR-EPRVEVMDPAG--GPRG 95 R +P + V P G GP G Sbjct: 500 SRGDPGIGVAGPPGPSGPPG 519 >gi|23238226 CDC42 effector protein 1 [Homo sapiens] Length = 391 Score = 34.7 bits (78), Expect = 0.19 Identities = 32/94 (34%), Positives = 33/94 (35%), Gaps = 17/94 (18%) Query: 13 TPLPLAAPRGPAAAGNDAGAPAATAPGGEGEPHSRPCDARLGSTDKELKAGAAATGSAPT 72 TP P A P PA N G PAA P P P A S G AA AP Sbjct: 224 TPAPAANP--PAPTANPTG-PAANPPATTANP---PAPAANPSAPAATPTGPAANPPAPA 277 Query: 73 APGTPWQREP-----------RVEVMDPAGGPRG 95 A TP P V+ GGPRG Sbjct: 278 ASSTPHGHCPNGVTAGLGPVAEVKSSPVGGGPRG 311 >gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] Length = 637 Score = 34.7 bits (78), Expect = 0.19 Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 4/93 (4%) Query: 5 VLGFLRSWTPLPLAAPRGPAAAGNDAGAPAA--TAPGGEGEPHSRPCDARLGSTDKELKA 62 V FLR P P G AA + AG+ A AP + C+ + EL Sbjct: 86 VPSFLRG--PAAPPPPAGGAANNHGAGSGAGGRAAPVESSQEEQSLCEGSNSAVSMELSE 143 Query: 63 GAAATGSAPTAPGTPWQREPRVEVMDPAGGPRG 95 G +P W+ + + +P GG G Sbjct: 144 PIVENGETEMSPEESWEHKEEISEAEPGGGSLG 176 >gi|32479521 dishevelled 1 [Homo sapiens] Length = 670 Score = 34.3 bits (77), Expect = 0.25 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 7/70 (10%) Query: 35 ATAPGGEGEPHSRPCDARLGSTDKELKAGAAATGSAP------TAPGTPWQREPRVEVMD 88 A GG G + +GS+ +E AG + GS+P TAPG P P + Sbjct: 569 AAGAGGSGSESDHTAPSGVGSSWRERPAGQLSRGSSPRSQASATAPGLP-PPHPTTKAYT 627 Query: 89 PAGGPRGVLP 98 GGP G P Sbjct: 628 VVGGPPGGPP 637 >gi|169209545 PREDICTED: hypothetical protein [Homo sapiens] Length = 237 Score = 34.3 bits (77), Expect = 0.25 Identities = 28/90 (31%), Positives = 34/90 (37%), Gaps = 18/90 (20%) Query: 29 DAGAPAATAPG---GEGEPH-----SRPCDARLGSTDKELKAGAAATGSAPTAP------ 74 D A A APG GEG P S P +A G + G + GS+P+ P Sbjct: 39 DVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKC 98 Query: 75 ----GTPWQREPRVEVMDPAGGPRGVLPRP 100 GT + PAG P G P P Sbjct: 99 SAWVGTCFPLSLLQAAGGPAGSPNGFCPEP 128 >gi|239753114 PREDICTED: hypothetical protein [Homo sapiens] Length = 322 Score = 34.3 bits (77), Expect = 0.25 Identities = 33/104 (31%), Positives = 44/104 (42%), Gaps = 8/104 (7%) Query: 14 PLPLAAPRGPAAAGNDAGAPAAT---APGGEGEPHSRPCDARLGST-DKELKAGAAATGS 69 P P AAP +A APA APG P RL + +L+AG A+TG Sbjct: 181 PPPPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRLPAPLPLQLRAGGASTGL 240 Query: 70 APTAPGTPWQREPRVEVMDPAGGPRGVLPRPCRVLVLLNPRGGK 113 A +PG ++ E+ GPR P CR+ P G+ Sbjct: 241 AAPSPGRGGKQS---EISFRGPGPRAQHP-GCRLRAGCEPSCGR 280 >gi|169210556 PREDICTED: hypothetical protein [Homo sapiens] Length = 237 Score = 34.3 bits (77), Expect = 0.25 Identities = 28/90 (31%), Positives = 34/90 (37%), Gaps = 18/90 (20%) Query: 29 DAGAPAATAPG---GEGEPH-----SRPCDARLGSTDKELKAGAAATGSAPTAP------ 74 D A A APG GEG P S P +A G + G + GS+P+ P Sbjct: 39 DVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKC 98 Query: 75 ----GTPWQREPRVEVMDPAGGPRGVLPRP 100 GT + PAG P G P P Sbjct: 99 SAWVGTCFPLSLLQAAGGPAGSPNGFCPEP 128 >gi|169210041 PREDICTED: hypothetical protein [Homo sapiens] Length = 237 Score = 34.3 bits (77), Expect = 0.25 Identities = 28/90 (31%), Positives = 34/90 (37%), Gaps = 18/90 (20%) Query: 29 DAGAPAATAPG---GEGEPH-----SRPCDARLGSTDKELKAGAAATGSAPTAP------ 74 D A A APG GEG P S P +A G + G + GS+P+ P Sbjct: 39 DVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKC 98 Query: 75 ----GTPWQREPRVEVMDPAGGPRGVLPRP 100 GT + PAG P G P P Sbjct: 99 SAWVGTCFPLSLLQAAGGPAGSPNGFCPEP 128 >gi|222537714 taxilin beta [Homo sapiens] Length = 684 Score = 33.9 bits (76), Expect = 0.33 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 3/83 (3%) Query: 11 SWTPLPLAAPRGPAAAGNDAGAP--AATAPGGEG-EPHSRPCDARLGSTDKELKAGAAAT 67 S +PLP P+ A G+DA P A+ +P G G E + K A A+ Sbjct: 552 SESPLPPLTPQAEAEGGSDAEPPSKASNSPAGLGAETQCEGLPVGAQADQASWKPEAEAS 611 Query: 68 GSAPTAPGTPWQREPRVEVMDPA 90 G AP AP ++ +V PA Sbjct: 612 GQAPQAPTEASLQKMEADVPAPA 634 >gi|78499633 phospholipase C, eta 2 [Homo sapiens] Length = 1416 Score = 33.9 bits (76), Expect = 0.33 Identities = 26/94 (27%), Positives = 33/94 (35%), Gaps = 6/94 (6%) Query: 14 PLPLAAPRGPAAAGNDAGAPAATAPGGEGEPHSRPCDARLGSTDKELKAGAAATGSAPTA 73 P P AP PA G +G+P T P P C + + G + PT+ Sbjct: 966 PGPGPAPEAPAQEGPGSGSPRDTRPLSTQRPLPPLCSLETIAEEPAPGPGPPPPAAVPTS 1025 Query: 74 PG---TPWQREPRVEVMDP---AGGPRGVLPRPC 101 P+ P V P PR PRPC Sbjct: 1026 SSQGRPPYPTGPGANVASPLEDTEEPRDSRPRPC 1059 >gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo sapiens] Length = 536 Score = 33.9 bits (76), Expect = 0.33 Identities = 34/118 (28%), Positives = 44/118 (37%), Gaps = 19/118 (16%) Query: 20 PRGPAAAGNDAGAPAATAPGGEGEPHSRP----------CDARLGSTDKELKAGAAATGS 69 P P AG + A +A G EG P SR R + + G +A Sbjct: 72 PTDPGRAGLRSWGAAGSARGSEGRPSSRQARPLRRPSRRARRRAPRCAPDRRCGDSAPRH 131 Query: 70 APTAPG---TPWQREPRVEVMDPAGGPRGVL------PRPCRVLVLLNPRGGKGKALQ 118 P A G P + + +DP PR L P+P R L L PR +G LQ Sbjct: 132 RPRALGRGRRPLRGRVLLRQLDPFTRPRFPLQFFQGCPQPSRCLGRLEPRRWRGHGLQ 189 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.137 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,024,588 Number of Sequences: 37866 Number of extensions: 1136912 Number of successful extensions: 6547 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 212 Number of HSP's that attempted gapping in prelim test: 5981 Number of HSP's gapped (non-prelim): 762 length of query: 470 length of database: 18,247,518 effective HSP length: 106 effective length of query: 364 effective length of database: 14,233,722 effective search space: 5181074808 effective search space used: 5181074808 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.