Guide to the Human Genome
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Name: AGK Sequence: fasta or formatted (422aa) NCBI GI: 8922701
Description:

acylglycerol kinase

Referenced in:

Sphingomyelin, Ceramides, and Glycolipids
Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         28           2
 C cysteine            1.9          8           1
 D aspartate           4.0         17           1
 E glutamate           7.1         30           2
 F phenylalanine       4.0         17           2
 G glycine             6.6         28           2
 H histidine           2.1          9           1
 I isoleucine          5.5         23           2
 K lysine              7.1         30           2
 L leucine            10.2         43           2
 M methionine          1.4          6           1
 N asparagine          3.1         13           2
 P proline             6.2         26           2
 Q glutamine           5.2         22           1
 R arginine            4.7         20           2
 S serine              5.9         25           2
 T threonine           8.3         35           2
 V valine              6.2         26           2
 W tryptophan          1.9          8           1
 Y tyrosine            1.9          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acylglycerol kinase 
SPHK1                 0.070   sphingosine kinase 1 isoform 3 
SPHK1                 0.070   sphingosine kinase 1 isoform 3 
SPHK1                 0.070   sphingosine kinase 1 isoform 1 
SPHK1                 0.070   sphingosine kinase 1 isoform 2 
SPHK2                 0.059   sphingosine kinase 2 
CERK                  0.056   ceramide kinase 
CERKL                 0.054   ceramide kinase-like isoform a 
CERKL                 0.038   ceramide kinase-like isoform b 
CERKL                 0.022   ceramide kinase-like isoform g 
KDM2B                 0.011   F-box and leucine-rich repeat protein 10 isoform a [...
DGKI                  0.011   diacylglycerol kinase, iota 
LOC100292408          0.010   PREDICTED: hypothetical protein 
KDM2B                 0.008   F-box and leucine-rich repeat protein 10 isoform b [...
CERKL                 0.006   ceramide kinase-like isoform d 
CDGAP                 0.005   Cdc42 GTPase-activating protein 
PPP1R15A              0.005   protein phosphatase 1, regulatory subunit 15A [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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